Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580024601.01.T01 | XP_003611409.1 | 94.415 | 376 | 20 | 1 | 4 | 378 | 35 | 410 | 0 | 749 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580024601.01.T01 | O23553 | 75.946 | 370 | 85 | 3 | 9 | 377 | 42 | 408 | 0 | 602 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580024601.01.T01 | G7JYN3 | 94.415 | 376 | 20 | 1 | 4 | 378 | 35 | 410 | 0.0 | 749 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0080049027.01 | MsG0580024601.01 | -0.801469 | 8.874198e-49 | 4.241247e-46 |
MsG0180000151.01 | MsG0580024601.01 | 0.811176 | 7.980010e-51 | 4.905645e-48 |
MsG0180000942.01 | MsG0580024601.01 | 0.811111 | 8.244091e-51 | 5.059340e-48 |
MsG0180001548.01 | MsG0580024601.01 | 0.827395 | 1.602458e-54 | 1.545247e-51 |
MsG0180003196.01 | MsG0580024601.01 | 0.801354 | 9.365915e-49 | 4.463451e-46 |
MsG0180005339.01 | MsG0580024601.01 | 0.842174 | 3.037925e-58 | 4.567796e-55 |
MsG0280011073.01 | MsG0580024601.01 | 0.829566 | 4.792097e-55 | 4.922716e-52 |
MsG0380012868.01 | MsG0580024601.01 | 0.813435 | 2.562950e-51 | 1.673644e-48 |
MsG0380014179.01 | MsG0580024601.01 | 0.845966 | 2.919387e-59 | 4.949251e-56 |
MsG0380014750.01 | MsG0580024601.01 | 0.824397 | 8.251868e-54 | 7.300211e-51 |
MsG0480019853.01 | MsG0580024601.01 | -0.823890 | 1.085636e-53 | 9.468335e-51 |
MsG0480021024.01 | MsG0580024601.01 | 0.819320 | 1.235418e-52 | 9.474970e-50 |
MsG0480022155.01 | MsG0580024601.01 | 0.860845 | 1.554402e-63 | 4.308696e-60 |
MsG0480022226.01 | MsG0580024601.01 | 0.805073 | 1.592159e-49 | 8.344769e-47 |
MsG0480022239.01 | MsG0580024601.01 | 0.853313 | 2.594579e-61 | 5.582544e-58 |
MsG0480022240.01 | MsG0580024601.01 | 0.891489 | 3.791129e-74 | 3.331025e-70 |
MsG0480022243.01 | MsG0580024601.01 | 0.877289 | 7.082596e-69 | 3.542588e-65 |
MsG0480022245.01 | MsG0580024601.01 | 0.879325 | 1.366439e-69 | 7.377128e-66 |
MsG0480022535.01 | MsG0580024601.01 | 0.808373 | 3.197279e-50 | 1.825076e-47 |
MsG0480022954.01 | MsG0580024601.01 | -0.818607 | 1.794259e-52 | 1.349294e-49 |
MsG0480023001.01 | MsG0580024601.01 | -0.816305 | 5.922646e-52 | 4.181721e-49 |
MsG0580024471.01 | MsG0580024601.01 | 0.867878 | 9.891441e-66 | 3.507280e-62 |
MsG0580024597.01 | MsG0580024601.01 | 0.952408 | 2.581949e-110 | 6.295838e-105 |
MsG0580024598.01 | MsG0580024601.01 | 0.963875 | 1.268571e-122 | 7.150993e-117 |
MsG0580024600.01 | MsG0580024601.01 | 0.802146 | 6.444086e-49 | 3.133221e-46 |
MsG0580024601.01 | MsG0580024872.01 | 0.818796 | 1.625922e-52 | 1.229119e-49 |
MsG0580024601.01 | MsG0580027899.01 | 0.800857 | 1.183498e-48 | 5.569884e-46 |
MsG0580024601.01 | MsG0580029914.01 | 0.814589 | 1.426275e-51 | 9.609629e-49 |
MsG0580024601.01 | MsG0680032413.01 | 0.806523 | 7.892100e-50 | 4.292900e-47 |
MsG0580024601.01 | MsG0680032516.01 | 0.837122 | 6.263051e-57 | 8.056528e-54 |
MsG0580024601.01 | MsG0680035618.01 | 0.854289 | 1.359553e-61 | 3.021667e-58 |
MsG0580024601.01 | MsG0680035664.01 | 0.810852 | 9.382188e-51 | 5.718539e-48 |
MsG0580024601.01 | MsG0780036048.01 | 0.823013 | 1.740606e-53 | 1.480941e-50 |
MsG0580024601.01 | MsG0780037052.01 | -0.824023 | 1.010479e-53 | 8.844838e-51 |
MsG0580024601.01 | MsG0780039964.01 | 0.809164 | 2.166212e-50 | 1.262602e-47 |
MsG0580024601.01 | MsG0780040794.01 | 0.819967 | 8.791808e-53 | 6.866645e-50 |
MsG0580024601.01 | MsG0880042086.01 | 0.834206 | 3.427004e-56 | 4.038383e-53 |
MsG0580024601.01 | MsG0880042415.01 | 0.830485 | 2.860107e-55 | 3.017316e-52 |
MsG0580024601.01 | MsG0880042416.01 | 0.800223 | 1.594311e-48 | 7.383063e-46 |
MsG0580024601.01 | MsG0880042417.01 | 0.801891 | 7.269195e-49 | 3.511711e-46 |
MsG0580024601.01 | MsG0880042794.01 | 0.805053 | 1.607295e-49 | 8.419820e-47 |
MsG0580024601.01 | MsG0880042948.01 | 0.800391 | 1.473423e-48 | 6.852506e-46 |
MsG0580024601.01 | MsG0880043107.01 | 0.816236 | 6.136174e-52 | 4.324053e-49 |
MsG0580024601.01 | MsG0880043829.01 | 0.842443 | 2.577674e-58 | 3.909419e-55 |
MsG0580024601.01 | MsG0880044524.01 | 0.804621 | 1.978843e-49 | 1.025090e-46 |
MsG0580024601.01 | MsG0880044834.01 | 0.804848 | 1.773961e-49 | 9.244426e-47 |
MsG0580024601.01 | MsG0880045190.01 | 0.831399 | 1.706533e-55 | 1.849696e-52 |
MsG0580024601.01 | MsG0880046124.01 | 0.827947 | 1.180888e-54 | 1.157056e-51 |
MsG0580024601.01 | MsG0880047275.01 | 0.804874 | 1.751749e-49 | 9.135253e-47 |
MsG0380015382.01 | MsG0580024601.01 | 0.803556 | 3.294709e-49 | 1.660824e-46 |
MsG0380016515.01 | MsG0580024601.01 | 0.809123 | 2.210140e-50 | 1.286831e-47 |
MsG0380016516.01 | MsG0580024601.01 | 0.806357 | 8.557523e-50 | 4.635060e-47 |
MsG0380017037.01 | MsG0580024601.01 | 0.810870 | 9.296803e-51 | 5.669256e-48 |
MsG0380017791.01 | MsG0580024601.01 | 0.817542 | 3.124164e-52 | 2.281709e-49 |
MsG0480018345.01 | MsG0580024601.01 | 0.849346 | 3.429505e-60 | 6.482848e-57 |
MsG0280007429.01 | MsG0580024601.01 | 0.856854 | 2.427591e-62 | 5.873325e-59 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580024601.01.T01 | MTR_5g013640 | 94.415 | 376 | 20 | 1 | 4 | 378 | 35 | 410 | 0.0 | 749 |
MsG0580024601.01.T01 | MTR_5g013620 | 91.799 | 378 | 30 | 1 | 1 | 378 | 36 | 412 | 0.0 | 740 |
MsG0580024601.01.T01 | MTR_4g099110 | 80.508 | 354 | 69 | 0 | 29 | 382 | 52 | 405 | 0.0 | 627 |
MsG0580024601.01.T01 | MTR_4g045667 | 53.517 | 327 | 148 | 3 | 53 | 378 | 11 | 334 | 3.18e-128 | 378 |
MsG0580024601.01.T01 | MTR_2g089030 | 54.268 | 328 | 146 | 3 | 52 | 378 | 83 | 407 | 2.08e-125 | 374 |
MsG0580024601.01.T01 | MTR_8g099775 | 51.734 | 346 | 158 | 5 | 40 | 378 | 61 | 404 | 9.33e-123 | 365 |
MsG0580024601.01.T01 | MTR_6g477780 | 67.382 | 233 | 75 | 1 | 147 | 378 | 10 | 242 | 1.42e-121 | 357 |
MsG0580024601.01.T01 | MTR_7g077410 | 50.289 | 346 | 167 | 4 | 33 | 377 | 243 | 584 | 5.41e-111 | 340 |
MsG0580024601.01.T01 | MTR_2g020240 | 44.083 | 338 | 183 | 2 | 42 | 378 | 70 | 402 | 7.36e-97 | 299 |
MsG0580024601.01.T01 | MTR_5g026210 | 40.000 | 375 | 214 | 7 | 8 | 377 | 169 | 537 | 3.36e-93 | 293 |
MsG0580024601.01.T01 | MTR_5g026210 | 40.308 | 325 | 184 | 7 | 25 | 347 | 189 | 505 | 9.82e-81 | 256 |
MsG0580024601.01.T01 | MTR_2g020240 | 44.444 | 270 | 145 | 1 | 109 | 378 | 3 | 267 | 1.15e-79 | 250 |
MsG0580024601.01.T01 | MTR_5g026210 | 40.942 | 276 | 157 | 5 | 25 | 298 | 189 | 460 | 8.51e-69 | 224 |
MsG0580024601.01.T01 | MTR_6g477770 | 66.667 | 93 | 31 | 0 | 55 | 147 | 106 | 198 | 7.50e-41 | 143 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580024601.01.T01 | AT4G17090 | 75.946 | 370 | 85 | 3 | 9 | 377 | 42 | 408 | 0.0 | 602 |
MsG0580024601.01.T01 | AT3G23920 | 64.384 | 365 | 124 | 3 | 15 | 378 | 71 | 430 | 2.62e-176 | 503 |
MsG0580024601.01.T01 | AT4G15210 | 53.049 | 328 | 149 | 4 | 53 | 378 | 12 | 336 | 5.21e-127 | 372 |
MsG0580024601.01.T01 | AT4G15210 | 53.049 | 328 | 149 | 4 | 53 | 378 | 12 | 336 | 2.59e-126 | 373 |
MsG0580024601.01.T01 | AT4G00490 | 47.581 | 372 | 187 | 5 | 10 | 377 | 47 | 414 | 3.63e-117 | 351 |
MsG0580024601.01.T01 | AT4G15210 | 54.545 | 286 | 126 | 3 | 94 | 378 | 1 | 283 | 4.55e-116 | 345 |
MsG0580024601.01.T01 | AT4G15210 | 54.545 | 286 | 126 | 3 | 94 | 378 | 1 | 283 | 4.55e-116 | 345 |
MsG0580024601.01.T01 | AT2G32290 | 51.524 | 328 | 154 | 4 | 52 | 377 | 75 | 399 | 3.43e-114 | 345 |
MsG0580024601.01.T01 | AT2G45880 | 48.961 | 337 | 167 | 4 | 42 | 377 | 235 | 567 | 9.13e-109 | 334 |
MsG0580024601.01.T01 | AT5G55700 | 46.429 | 336 | 169 | 3 | 54 | 378 | 91 | 426 | 3.01e-106 | 323 |
MsG0580024601.01.T01 | AT5G45300 | 44.277 | 332 | 180 | 4 | 47 | 377 | 247 | 574 | 1.09e-92 | 292 |
MsG0580024601.01.T01 | AT5G45300 | 44.277 | 332 | 180 | 4 | 47 | 377 | 245 | 572 | 1.30e-92 | 292 |
MsG0580024601.01.T01 | AT5G45300 | 44.277 | 332 | 180 | 4 | 47 | 377 | 261 | 588 | 1.70e-92 | 292 |
MsG0580024601.01.T01 | AT5G18670 | 43.210 | 324 | 176 | 2 | 55 | 378 | 87 | 402 | 2.43e-85 | 269 |
MsG0580024601.01.T01 | AT5G55700 | 49.778 | 225 | 106 | 2 | 161 | 378 | 39 | 263 | 6.24e-74 | 234 |
Find 93 sgRNAs with CRISPR-Local
Find 195 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGATAGATTCACAGATTATT+TGG | 0.131732 | 5:-6779526 | MsG0580024601.01.T01:CDS |
TTCCAAGTTCCATCAGTTTC+AGG | 0.191128 | 5:+6779088 | None:intergenic |
ATGGTCCTATGAAGTATAAT+TGG | 0.246951 | 5:-6780023 | MsG0580024601.01.T01:CDS |
CTGGTTTACACAGACAAATT+AGG | 0.254676 | 5:-6779651 | MsG0580024601.01.T01:CDS |
ACAGTATATGAGATCTTCTT+TGG | 0.254734 | 5:-6778887 | MsG0580024601.01.T01:intron |
ACTTGTTTGAAATATGCTTT+TGG | 0.284260 | 5:+6778669 | None:intergenic |
ACTTGGAAGTTTCCAGGAAT+TGG | 0.297749 | 5:-6779073 | MsG0580024601.01.T01:CDS |
GGTTGATGCTTGGTGGGGTT+TGG | 0.299766 | 5:-6780055 | MsG0580024601.01.T01:CDS |
GGAACATGGAACACAGAATA+TGG | 0.310195 | 5:-6778757 | MsG0580024601.01.T01:CDS |
CATTGGAATTCTCCAATTCC+TGG | 0.333977 | 5:+6779061 | None:intergenic |
GATGGAACTTGGAAGTTTCC+AGG | 0.338985 | 5:-6779079 | MsG0580024601.01.T01:CDS |
TTTGCTAGCATTTGTGCTAT+TGG | 0.345574 | 5:+6778532 | None:intergenic |
GAAGCATCAGCTGCAGCAAT+TGG | 0.348122 | 5:-6778865 | MsG0580024601.01.T01:CDS |
ATGGAGATTTCTTCCTTGAT+TGG | 0.348721 | 5:-6778738 | MsG0580024601.01.T01:CDS |
CATGGGTGCTTGAAGAAATA+AGG | 0.350399 | 5:-6779686 | MsG0580024601.01.T01:CDS |
GAAATGTTGGTGACTCTTGC+AGG | 0.358515 | 5:-6779918 | MsG0580024601.01.T01:intron |
ACAGCCCAACGAGATGTATT+CGG | 0.366361 | 5:+6779617 | None:intergenic |
GATAGATTCACAGATTATTT+GGG | 0.369481 | 5:-6779525 | MsG0580024601.01.T01:CDS |
ACAAGTGGACCACATGATTC+TGG | 0.376267 | 5:-6778826 | MsG0580024601.01.T01:CDS |
CCCATTGTTACCGTGTCTAA+TGG | 0.379739 | 5:+6780153 | None:intergenic |
AATCAATATCCTGAAGATAC+TGG | 0.386987 | 5:-6778796 | MsG0580024601.01.T01:CDS |
TGGTTTACACAGACAAATTA+GGG | 0.392347 | 5:-6779650 | MsG0580024601.01.T01:CDS |
TAAACAAACATTCTTAGTTA+AGG | 0.395318 | 5:-6780322 | MsG0580024601.01.T01:CDS |
CAGTTAAGGAAAACAAGAAA+TGG | 0.402206 | 5:-6780251 | MsG0580024601.01.T01:CDS |
TTGTCTGTGTAAACCAGCTC+AGG | 0.410476 | 5:+6779657 | None:intergenic |
GCTTCCCAATTATACTTCAT+AGG | 0.415265 | 5:+6780018 | None:intergenic |
CAGCCCAACGAGATGTATTC+GGG | 0.415616 | 5:+6779618 | None:intergenic |
AGCTGGAAGAACTCCACTTC+AGG | 0.421399 | 5:-6779577 | MsG0580024601.01.T01:CDS |
CTAGCATACCTTTACCTCCA+TGG | 0.426539 | 5:-6779704 | MsG0580024601.01.T01:intron |
ACGGAAGCTTCTCATGTAAT+CGG | 0.432165 | 5:+6779548 | None:intergenic |
AGCAATGAATGCTAGTTTGA+TGG | 0.437255 | 5:-6780109 | MsG0580024601.01.T01:CDS |
AAACACCAACTCTACAGTTA+AGG | 0.445155 | 5:-6780265 | MsG0580024601.01.T01:CDS |
TCCAAGTTCCATCAGTTTCA+GGG | 0.453104 | 5:+6779089 | None:intergenic |
TAGCATACCTTTACCTCCAT+GGG | 0.456896 | 5:-6779703 | MsG0580024601.01.T01:CDS |
TTTGTACCTTGTCATAGCAT+TGG | 0.457100 | 5:+6779044 | None:intergenic |
GGAGTTCTTCCAGCTAGAAC+AGG | 0.462089 | 5:+6779585 | None:intergenic |
CCATCAGTTTCAGGGTAAGA+TGG | 0.465255 | 5:+6779097 | None:intergenic |
GATTCAGTGCCTGTTCTAGC+TGG | 0.467117 | 5:-6779594 | MsG0580024601.01.T01:CDS |
TCAAGCACCCATGGAGGTAA+AGG | 0.469083 | 5:+6779696 | None:intergenic |
TTGAAGAGTGCTGGAGTTGA+AGG | 0.475342 | 5:-6780084 | MsG0580024601.01.T01:CDS |
AGTAATGGTTGATGCTTGGT+GGG | 0.476693 | 5:-6780061 | MsG0580024601.01.T01:CDS |
TGGTCCTATGAAGTATAATT+GGG | 0.480087 | 5:-6780022 | MsG0580024601.01.T01:CDS |
CTTATTTCTTCAAGCACCCA+TGG | 0.485962 | 5:+6779687 | None:intergenic |
ACCCTGAAACTGATGGAACT+TGG | 0.491404 | 5:-6779090 | MsG0580024601.01.T01:CDS |
AAGGAAATTCAAGTGGGACT+AGG | 0.494078 | 5:-6779142 | MsG0580024601.01.T01:CDS |
AGTTAAGGAAAACAAGAAAT+GGG | 0.500489 | 5:-6780250 | MsG0580024601.01.T01:CDS |
CCATTAGACACGGTAACAAT+GGG | 0.505572 | 5:-6780153 | MsG0580024601.01.T01:CDS |
AAAAGCATATTTCAAACAAG+TGG | 0.507306 | 5:-6778667 | MsG0580024601.01.T01:CDS |
GAGTAATGGTTGATGCTTGG+TGG | 0.507394 | 5:-6780062 | MsG0580024601.01.T01:CDS |
TTGATGGCATTGAAGAGTGC+TGG | 0.508850 | 5:-6780093 | MsG0580024601.01.T01:CDS |
CATCAATGTGGTGGAAATGT+TGG | 0.516528 | 5:-6779931 | MsG0580024601.01.T01:CDS |
TTATGCTGAGCTTGTTCAGA+TGG | 0.518500 | 5:-6779995 | MsG0580024601.01.T01:CDS |
GTAATGGTTGATGCTTGGTG+GGG | 0.525670 | 5:-6780060 | MsG0580024601.01.T01:CDS |
AGCACAAATGCTAGCAAACA+TGG | 0.531275 | 5:-6778527 | MsG0580024601.01.T01:CDS |
AATCCCGAATACATCTCGTT+GGG | 0.532457 | 5:-6779621 | MsG0580024601.01.T01:CDS |
AAGCATCAGCTGCAGCAATT+GGG | 0.535892 | 5:-6778864 | MsG0580024601.01.T01:CDS |
CCATCTTACCCTGAAACTGA+TGG | 0.538520 | 5:-6779097 | MsG0580024601.01.T01:CDS |
GCCATTAGACACGGTAACAA+TGG | 0.539108 | 5:-6780154 | MsG0580024601.01.T01:CDS |
CAGCAATTGGGAAGAAAGAG+TGG | 0.543241 | 5:-6778852 | MsG0580024601.01.T01:CDS |
TAATCGGAGTAGACCTGAAG+TGG | 0.543820 | 5:+6779564 | None:intergenic |
TGCTGGAGTTGAAGGAGTAA+TGG | 0.546595 | 5:-6780076 | MsG0580024601.01.T01:CDS |
GTTTGCTTGAGTACCAATCA+AGG | 0.552816 | 5:+6778725 | None:intergenic |
TATAACACAAGGTTTCATGA+TGG | 0.559816 | 5:-6778562 | MsG0580024601.01.T01:CDS |
CTGCAGGTTACTATAACACA+AGG | 0.561651 | 5:-6778573 | MsG0580024601.01.T01:CDS |
AAGGAGTAATGGTTGATGCT+TGG | 0.565190 | 5:-6780065 | MsG0580024601.01.T01:CDS |
GTTCAGATGGTACAAAAGCA+TGG | 0.567071 | 5:-6779982 | MsG0580024601.01.T01:CDS |
GAATCCCGAATACATCTCGT+TGG | 0.567655 | 5:-6779622 | MsG0580024601.01.T01:CDS |
ACACAGACAAATTAGGGAGG+AGG | 0.571216 | 5:-6779644 | MsG0580024601.01.T01:CDS |
AATAAGGAAGAACCCTGAGC+TGG | 0.576300 | 5:-6779670 | MsG0580024601.01.T01:CDS |
AATAATCTGTGAATCTATCA+CGG | 0.584013 | 5:+6779529 | None:intergenic |
CATGCAACTGAATTAACTGC+AGG | 0.589620 | 5:-6778589 | MsG0580024601.01.T01:CDS |
AAGAAAGAGTGGGGAACAAG+TGG | 0.590788 | 5:-6778841 | MsG0580024601.01.T01:CDS |
GGATATCTCAACTCCCCACA+TGG | 0.597220 | 5:+6779118 | None:intergenic |
TGCTGATTCGAATAGAGTAC+CGG | 0.599220 | 5:-6780190 | MsG0580024601.01.T01:CDS |
AAGTGGGACTAGGTCCATGT+GGG | 0.602013 | 5:-6779132 | MsG0580024601.01.T01:CDS |
TCATTTGAAGGAAATTCAAG+TGG | 0.603673 | 5:-6779149 | MsG0580024601.01.T01:intron |
AGCAATTGGGAAGAAAGAGT+GGG | 0.613841 | 5:-6778851 | MsG0580024601.01.T01:CDS |
TCAAGCAAACTTGTTGAACA+TGG | 0.618498 | 5:-6778712 | MsG0580024601.01.T01:CDS |
TGTCTGTGTAAACCAGCTCA+GGG | 0.638501 | 5:+6779658 | None:intergenic |
ATGCAAGAAACATTTCACAA+AGG | 0.640277 | 5:-6780289 | MsG0580024601.01.T01:CDS |
CAAGTGGGACTAGGTCCATG+TGG | 0.641124 | 5:-6779133 | MsG0580024601.01.T01:CDS |
TCGTGGTTATGAGCAATCGA+TGG | 0.660833 | 5:+6780213 | None:intergenic |
AATGGCAACATCACAAACAC+CGG | 0.660873 | 5:+6780171 | None:intergenic |
TTAGACACGGTAACAATGGG+AGG | 0.667348 | 5:-6780150 | MsG0580024601.01.T01:CDS |
CATTTGAAGGAAATTCAAGT+GGG | 0.670355 | 5:-6779148 | MsG0580024601.01.T01:intron |
CTCTATTCGAATCAGCATCG+TGG | 0.679739 | 5:+6780196 | None:intergenic |
ATTTCTTCAAGCACCCATGG+AGG | 0.686996 | 5:+6779690 | None:intergenic |
AGAATTCCAATGCTATGACA+AGG | 0.689937 | 5:-6779050 | MsG0580024601.01.T01:intron |
TGTGATGTTGCCATTAGACA+CGG | 0.702107 | 5:-6780163 | MsG0580024601.01.T01:CDS |
GCAATTGGGAAGAAAGAGTG+GGG | 0.706843 | 5:-6778850 | MsG0580024601.01.T01:CDS |
AGTGGGACTAGGTCCATGTG+GGG | 0.709601 | 5:-6779131 | MsG0580024601.01.T01:CDS |
TTGTATTGACCAGAATCATG+TGG | 0.728140 | 5:+6778817 | None:intergenic |
TTTACACAGACAAATTAGGG+AGG | 0.734523 | 5:-6779647 | MsG0580024601.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATTAAGAATTTAATATACT+TGG | - | Chr5:6780187-6780206 | MsG0580024601.01.T01:CDS | 10.0% |
!! | TATTAATGAAATAATTCATA+TGG | - | Chr5:6779169-6779188 | MsG0580024601.01.T01:intron | 10.0% |
!!! | AGTATCATATTTTTTATTTT+TGG | + | Chr5:6779887-6779906 | None:intergenic | 10.0% |
!! | TTTCATATATGCTAAAAAAA+AGG | + | Chr5:6778748-6778767 | None:intergenic | 15.0% |
!!! | CTTAATAAGATAACTTTTTA+TGG | + | Chr5:6779253-6779272 | None:intergenic | 15.0% |
!!! | TTAGCATATATGAAATATTT+TGG | - | Chr5:6778753-6778772 | MsG0580024601.01.T01:CDS | 15.0% |
!! | ATTAAAACCAAATCATTTGA+AGG | - | Chr5:6780472-6780491 | MsG0580024601.01.T01:intron | 20.0% |
!! | TAAACAAACATTCTTAGTTA+AGG | - | Chr5:6779311-6779330 | MsG0580024601.01.T01:intron | 20.0% |
!! | TACATTCAATTTGTCATATA+AGG | - | Chr5:6780361-6780380 | MsG0580024601.01.T01:intron | 20.0% |
!! | TTAAATATGTTTAAACCAAG+TGG | + | Chr5:6778537-6778556 | None:intergenic | 20.0% |
!!! | TGTAAATTTTAAGGAGAAAA+GGG | - | Chr5:6779139-6779158 | MsG0580024601.01.T01:CDS | 20.0% |
! | AATAATCTGTGAATCTATCA+CGG | + | Chr5:6780107-6780126 | None:intergenic | 25.0% |
! | ACTTGAGTAAATAAACATGT+CGG | - | Chr5:6779023-6779042 | MsG0580024601.01.T01:intron | 25.0% |
! | AGTTAAGGAAAACAAGAAAT+GGG | - | Chr5:6779383-6779402 | MsG0580024601.01.T01:intron | 25.0% |
! | GATAGATTCACAGATTATTT+GGG | - | Chr5:6780108-6780127 | MsG0580024601.01.T01:CDS | 25.0% |
! | GCAACAAGTTTAATAGTATT+TGG | - | Chr5:6779062-6779081 | MsG0580024601.01.T01:CDS | 25.0% |
! | TAATATTCAACCACCAATTT+AGG | - | Chr5:6779764-6779783 | MsG0580024601.01.T01:intron | 25.0% |
! | TATGCTAAAAAAAAGGTCAA+TGG | + | Chr5:6778741-6778760 | None:intergenic | 25.0% |
! | TGAATTTCCTTCAAATGATT+TGG | + | Chr5:6780482-6780501 | None:intergenic | 25.0% |
! | TGATAGATTCACAGATTATT+TGG | - | Chr5:6780107-6780126 | MsG0580024601.01.T01:CDS | 25.0% |
! | TGTCTAACATCAATATGATT+TGG | + | Chr5:6780651-6780670 | None:intergenic | 25.0% |
! | TTAATAGTATTTGGCATGAA+GGG | - | Chr5:6779071-6779090 | MsG0580024601.01.T01:CDS | 25.0% |
! | TTTAATAGTATTTGGCATGA+AGG | - | Chr5:6779070-6779089 | MsG0580024601.01.T01:CDS | 25.0% |
!! | AAAAGCATATTTCAAACAAG+TGG | - | Chr5:6780966-6780985 | MsG0580024601.01.T01:intron | 25.0% |
!! | AAGATTTCTTCTGATAATGA+TGG | - | Chr5:6778976-6778995 | MsG0580024601.01.T01:intron | 25.0% |
!! | AGATTTCTTCTGATAATGAT+GGG | - | Chr5:6778977-6778996 | MsG0580024601.01.T01:intron | 25.0% |
!! | GGAAATTGGTGTAAATTTTA+AGG | - | Chr5:6779130-6779149 | MsG0580024601.01.T01:CDS | 25.0% |
!! | TGTTTGAAAGTAAGTCATTT+TGG | + | Chr5:6780729-6780748 | None:intergenic | 25.0% |
!!! | AAGATACTGGATTTTTCAAA+AGG | - | Chr5:6780850-6780869 | MsG0580024601.01.T01:intron | 25.0% |
!!! | ACTTGTTTGAAATATGCTTT+TGG | + | Chr5:6780967-6780986 | None:intergenic | 25.0% |
!!! | AGATACTGGATTTTTCAAAA+GGG | - | Chr5:6780851-6780870 | MsG0580024601.01.T01:intron | 25.0% |
!!! | GTGTAAATTTTAAGGAGAAA+AGG | - | Chr5:6779138-6779157 | MsG0580024601.01.T01:CDS | 25.0% |
!!! | TTGATAGCATACATTTTTGT+GGG | + | Chr5:6778581-6778600 | None:intergenic | 25.0% |
!!! | TTTGATAGCATACATTTTTG+TGG | + | Chr5:6778582-6778601 | None:intergenic | 25.0% |
AAAAAAAAGGTCAATGGCTT+GGG | + | Chr5:6778735-6778754 | None:intergenic | 30.0% | |
AAACTATCAGCAAAAATAGC+TGG | - | Chr5:6780993-6781012 | MsG0580024601.01.T01:intron | 30.0% | |
AATCAATATCCTGAAGATAC+TGG | - | Chr5:6780837-6780856 | MsG0580024601.01.T01:intron | 30.0% | |
ACACTAAATAGAGCCTAAAT+TGG | + | Chr5:6779780-6779799 | None:intergenic | 30.0% | |
ACAGTATATGAGATCTTCTT+TGG | - | Chr5:6780746-6780765 | MsG0580024601.01.T01:intron | 30.0% | |
ATACAGACTTGAAAATTTGC+TGG | - | Chr5:6778950-6778969 | MsG0580024601.01.T01:intron | 30.0% | |
ATGCAAGAAACATTTCACAA+AGG | - | Chr5:6779344-6779363 | MsG0580024601.01.T01:intron | 30.0% | |
ATGGTCCTATGAAGTATAAT+TGG | - | Chr5:6779610-6779629 | MsG0580024601.01.T01:CDS | 30.0% | |
CAAAAATAGCTGGAATTCAT+TGG | - | Chr5:6781003-6781022 | MsG0580024601.01.T01:intron | 30.0% | |
CAGTTAAGGAAAACAAGAAA+TGG | - | Chr5:6779382-6779401 | MsG0580024601.01.T01:intron | 30.0% | |
CATATGGAGAAAATAGAGAA+GGG | - | Chr5:6779185-6779204 | MsG0580024601.01.T01:intron | 30.0% | |
CATTTGAAGGAAATTCAAGT+GGG | - | Chr5:6780485-6780504 | MsG0580024601.01.T01:intron | 30.0% | |
CTAAATCTCACATGTAAGTT+AGG | - | Chr5:6779109-6779128 | MsG0580024601.01.T01:CDS | 30.0% | |
GCAAATGGTGTTTACATATA+GGG | - | Chr5:6778654-6778673 | MsG0580024601.01.T01:CDS | 30.0% | |
TAAAAAAAAGGTCAATGGCT+TGG | + | Chr5:6778736-6778755 | None:intergenic | 30.0% | |
TATAACACAAGGTTTCATGA+TGG | - | Chr5:6781071-6781090 | MsG0580024601.01.T01:intron | 30.0% | |
TCACATGTAAGTTAGGAAAT+TGG | - | Chr5:6779116-6779135 | MsG0580024601.01.T01:CDS | 30.0% | |
TCATATGGAGAAAATAGAGA+AGG | - | Chr5:6779184-6779203 | MsG0580024601.01.T01:intron | 30.0% | |
TCATTTGAAGGAAATTCAAG+TGG | - | Chr5:6780484-6780503 | MsG0580024601.01.T01:intron | 30.0% | |
TGGTCCTATGAAGTATAATT+GGG | - | Chr5:6779611-6779630 | MsG0580024601.01.T01:CDS | 30.0% | |
TGGTTTACACAGACAAATTA+GGG | - | Chr5:6779983-6780002 | MsG0580024601.01.T01:CDS | 30.0% | |
TTGAAAAATCCAGTATCTTC+AGG | + | Chr5:6780849-6780868 | None:intergenic | 30.0% | |
! | ATTTTCAACGAATCAATGTG+TGG | + | Chr5:6780268-6780287 | None:intergenic | 30.0% |
! | GATAACTTTTTATGGAGCAT+TGG | + | Chr5:6779245-6779264 | None:intergenic | 30.0% |
! | GATTTCTTCTGATAATGATG+GGG | - | Chr5:6778978-6778997 | MsG0580024601.01.T01:intron | 30.0% |
! | GTTATGTCTTTTCATCAATG+TGG | - | Chr5:6779690-6779709 | MsG0580024601.01.T01:CDS | 30.0% |
!! | ATTTTTCATGCTGCTTCATA+AGG | - | Chr5:6779279-6779298 | MsG0580024601.01.T01:intron | 30.0% |
!! | TGCAAGAGGAATACTTTTTA+GGG | - | Chr5:6780389-6780408 | MsG0580024601.01.T01:intron | 30.0% |
!! | TTGCAAGAGGAATACTTTTT+AGG | - | Chr5:6780388-6780407 | MsG0580024601.01.T01:intron | 30.0% |
!! | TTGTTGCGTGAATATTTTGA+AGG | + | Chr5:6779049-6779068 | None:intergenic | 30.0% |
!! | TTTTTGACTATCAAGCCTAA+AGG | + | Chr5:6778888-6778907 | None:intergenic | 30.0% |
!!! | TATGAAATATTTTGGTCGCT+CGG | - | Chr5:6778761-6778780 | MsG0580024601.01.T01:CDS | 30.0% |
AAACACCAACTCTACAGTTA+AGG | - | Chr5:6779368-6779387 | MsG0580024601.01.T01:intron | 35.0% | |
ACTAAGACTTGATGCACATT+TGG | - | Chr5:6780432-6780451 | MsG0580024601.01.T01:intron | 35.0% | |
AGAATTCCAATGCTATGACA+AGG | - | Chr5:6780583-6780602 | MsG0580024601.01.T01:intron | 35.0% | |
ATGGAGATTTCTTCCTTGAT+TGG | - | Chr5:6780895-6780914 | MsG0580024601.01.T01:intron | 35.0% | |
ATGGTGTTTACATATAGGGA+CGG | - | Chr5:6778658-6778677 | MsG0580024601.01.T01:CDS | 35.0% | |
CATAGTAAGTTTCACCAACT+TGG | - | Chr5:6780140-6780159 | MsG0580024601.01.T01:CDS | 35.0% | |
CATATAAGGATAGTTGCAAG+AGG | - | Chr5:6780375-6780394 | MsG0580024601.01.T01:intron | 35.0% | |
CTAAATAGAGCCTAAATTGG+TGG | + | Chr5:6779777-6779796 | None:intergenic | 35.0% | |
CTGGTTTACACAGACAAATT+AGG | - | Chr5:6779982-6780001 | MsG0580024601.01.T01:CDS | 35.0% | |
GCTTCCCAATTATACTTCAT+AGG | + | Chr5:6779618-6779637 | None:intergenic | 35.0% | |
GGCAAATGGTGTTTACATAT+AGG | - | Chr5:6778653-6778672 | MsG0580024601.01.T01:CDS | 35.0% | |
GTTTATTTACTCAAGTACCC+TGG | + | Chr5:6779019-6779038 | None:intergenic | 35.0% | |
TAAACACCATTTGCCTCTAA+GGG | + | Chr5:6778648-6778667 | None:intergenic | 35.0% | |
TTTACACAGACAAATTAGGG+AGG | - | Chr5:6779986-6780005 | MsG0580024601.01.T01:CDS | 35.0% | |
TTTGCTAGCATTTGTGCTAT+TGG | + | Chr5:6781104-6781123 | None:intergenic | 35.0% | |
TTTGTACCTTGTCATAGCAT+TGG | + | Chr5:6780592-6780611 | None:intergenic | 35.0% | |
! | AGCAATGAATGCTAGTTTGA+TGG | - | Chr5:6779524-6779543 | MsG0580024601.01.T01:CDS | 35.0% |
! | ATGTCTTTTCATCAATGTGG+TGG | - | Chr5:6779693-6779712 | MsG0580024601.01.T01:CDS | 35.0% |
! | GTTTTCCTTAACTGTAGAGT+TGG | + | Chr5:6779376-6779395 | None:intergenic | 35.0% |
! | TTGTATTGACCAGAATCATG+TGG | + | Chr5:6780819-6780838 | None:intergenic | 35.0% |
! | TTTTCAAAAGGGAAGGAACA+TGG | - | Chr5:6780862-6780881 | MsG0580024601.01.T01:intron | 35.0% |
!! | ACCAACTTGGTCTTCAATTT+TGG | - | Chr5:6780153-6780172 | MsG0580024601.01.T01:CDS | 35.0% |
!! | ACTGGATTTTTCAAAAGGGA+AGG | - | Chr5:6780855-6780874 | MsG0580024601.01.T01:intron | 35.0% |
!! | ATATGCTTTTGGCTGATACA+AGG | + | Chr5:6780956-6780975 | None:intergenic | 35.0% |
!! | CAACTTGGTCTTCAATTTTG+GGG | - | Chr5:6780155-6780174 | MsG0580024601.01.T01:CDS | 35.0% |
!! | CCAACTTGGTCTTCAATTTT+GGG | - | Chr5:6780154-6780173 | MsG0580024601.01.T01:CDS | 35.0% |
!! | TCAAGCAAACTTGTTGAACA+TGG | - | Chr5:6780921-6780940 | MsG0580024601.01.T01:intron | 35.0% |
!! | TCTAAGGGTGCTTACATATA+GGG | + | Chr5:6778633-6778652 | None:intergenic | 35.0% |
!! | TTTTTGTGGGTTAATGAAGC+AGG | + | Chr5:6778568-6778587 | None:intergenic | 35.0% |
!!! | TCTTCAATTTTGGGGTTACT+TGG | - | Chr5:6780163-6780182 | MsG0580024601.01.T01:CDS | 35.0% |
!!! | TTTTTATGGAGCATTGGAGA+TGG | + | Chr5:6779239-6779258 | None:intergenic | 35.0% |
AAGGAAATTCAAGTGGGACT+AGG | - | Chr5:6780491-6780510 | MsG0580024601.01.T01:intron | 40.0% | |
AATCCCGAATACATCTCGTT+GGG | - | Chr5:6780012-6780031 | MsG0580024601.01.T01:CDS | 40.0% | |
AATGGCAACATCACAAACAC+CGG | + | Chr5:6779465-6779484 | None:intergenic | 40.0% | |
ACGGAAGCTTCTCATGTAAT+CGG | + | Chr5:6780088-6780107 | None:intergenic | 40.0% | |
ACTTGGAAGTTTCCAGGAAT+TGG | - | Chr5:6780560-6780579 | MsG0580024601.01.T01:intron | 40.0% | |
AGCAATTGGGAAGAAAGAGT+GGG | - | Chr5:6780782-6780801 | MsG0580024601.01.T01:intron | 40.0% | |
AGCACAAATGCTAGCAAACA+TGG | - | Chr5:6781106-6781125 | MsG0580024601.01.T01:intron | 40.0% | |
CATGCAACTGAATTAACTGC+AGG | - | Chr5:6781044-6781063 | MsG0580024601.01.T01:intron | 40.0% | |
CATGGGTGCTTGAAGAAATA+AGG | - | Chr5:6779947-6779966 | MsG0580024601.01.T01:CDS | 40.0% | |
CATTGGAATTCTCCAATTCC+TGG | + | Chr5:6780575-6780594 | None:intergenic | 40.0% | |
CCATTAGACACGGTAACAAT+GGG | - | Chr5:6779480-6779499 | MsG0580024601.01.T01:intron | 40.0% | |
CCCAAAATTGAAGACCAAGT+TGG | + | Chr5:6780157-6780176 | None:intergenic | 40.0% | |
CTATATGTAAGCACCCTTAG+AGG | - | Chr5:6778632-6778651 | MsG0580024601.01.T01:CDS | 40.0% | |
CTATCAAGCCTAAAGGATGA+AGG | + | Chr5:6778881-6778900 | None:intergenic | 40.0% | |
CTGCAGGTTACTATAACACA+AGG | - | Chr5:6781060-6781079 | MsG0580024601.01.T01:intron | 40.0% | |
GGAACATGGAACACAGAATA+TGG | - | Chr5:6780876-6780895 | MsG0580024601.01.T01:intron | 40.0% | |
GTAAACACCATTTGCCTCTA+AGG | + | Chr5:6778649-6778668 | None:intergenic | 40.0% | |
GTGCTCATTACCAAGTAGTT+TGG | - | Chr5:6778835-6778854 | MsG0580024601.01.T01:CDS | 40.0% | |
GTTCAGATGGTACAAAAGCA+TGG | - | Chr5:6779651-6779670 | MsG0580024601.01.T01:CDS | 40.0% | |
GTTTGCTTGAGTACCAATCA+AGG | + | Chr5:6780911-6780930 | None:intergenic | 40.0% | |
TAGCATACCTTTACCTCCAT+GGG | - | Chr5:6779930-6779949 | MsG0580024601.01.T01:CDS | 40.0% | |
TCCAAGTTCCATCAGTTTCA+GGG | + | Chr5:6780547-6780566 | None:intergenic | 40.0% | |
TGTGATGTTGCCATTAGACA+CGG | - | Chr5:6779470-6779489 | MsG0580024601.01.T01:intron | 40.0% | |
TGTTTACATATAGGGACGGA+GGG | - | Chr5:6778662-6778681 | MsG0580024601.01.T01:CDS | 40.0% | |
TTCCAAGTTCCATCAGTTTC+AGG | + | Chr5:6780548-6780567 | None:intergenic | 40.0% | |
TTTGGTCGCTTGGTCATTTA+GGG | - | Chr5:6778853-6778872 | MsG0580024601.01.T01:CDS | 40.0% | |
! | AAGGAGTAATGGTTGATGCT+TGG | - | Chr5:6779568-6779587 | MsG0580024601.01.T01:CDS | 40.0% |
! | AGTAATGGTTGATGCTTGGT+GGG | - | Chr5:6779572-6779591 | MsG0580024601.01.T01:CDS | 40.0% |
! | CATCAATGTGGTGGAAATGT+TGG | - | Chr5:6779702-6779721 | MsG0580024601.01.T01:CDS | 40.0% |
! | CTTATTTCTTCAAGCACCCA+TGG | + | Chr5:6779949-6779968 | None:intergenic | 40.0% |
! | TGGGGTTTGGTTGAAAAAGA+TGG | - | Chr5:6779591-6779610 | MsG0580024601.01.T01:CDS | 40.0% |
! | TTATGCTGAGCTTGTTCAGA+TGG | - | Chr5:6779638-6779657 | MsG0580024601.01.T01:CDS | 40.0% |
!! | CTCTAAGGGTGCTTACATAT+AGG | + | Chr5:6778634-6778653 | None:intergenic | 40.0% |
!! | TGCTGATTCGAATAGAGTAC+CGG | - | Chr5:6779443-6779462 | MsG0580024601.01.T01:intron | 40.0% |
AAGAAAGAGTGGGGAACAAG+TGG | - | Chr5:6780792-6780811 | MsG0580024601.01.T01:intron | 45.0% | |
AAGCATCAGCTGCAGCAATT+GGG | - | Chr5:6780769-6780788 | MsG0580024601.01.T01:intron | 45.0% | |
AATAAGGAAGAACCCTGAGC+TGG | - | Chr5:6779963-6779982 | MsG0580024601.01.T01:CDS | 45.0% | |
ACAAGTGGACCACATGATTC+TGG | - | Chr5:6780807-6780826 | MsG0580024601.01.T01:intron | 45.0% | |
ACACAGACAAATTAGGGAGG+AGG | - | Chr5:6779989-6780008 | MsG0580024601.01.T01:CDS | 45.0% | |
ACAGCCCAACGAGATGTATT+CGG | + | Chr5:6780019-6780038 | None:intergenic | 45.0% | |
ACCCTGAAACTGATGGAACT+TGG | - | Chr5:6780543-6780562 | MsG0580024601.01.T01:intron | 45.0% | |
ATTTCTTCAAGCACCCATGG+AGG | + | Chr5:6779946-6779965 | None:intergenic | 45.0% | |
CAGCAATTGGGAAGAAAGAG+TGG | - | Chr5:6780781-6780800 | MsG0580024601.01.T01:intron | 45.0% | |
CCATCAGTTTCAGGGTAAGA+TGG | + | Chr5:6780539-6780558 | None:intergenic | 45.0% | |
CCATCTTACCCTGAAACTGA+TGG | - | Chr5:6780536-6780555 | MsG0580024601.01.T01:intron | 45.0% | |
CCCATTGTTACCGTGTCTAA+TGG | + | Chr5:6779483-6779502 | None:intergenic | 45.0% | |
CTAGCATACCTTTACCTCCA+TGG | - | Chr5:6779929-6779948 | MsG0580024601.01.T01:CDS | 45.0% | |
CTCTATTCGAATCAGCATCG+TGG | + | Chr5:6779440-6779459 | None:intergenic | 45.0% | |
GAATCCCGAATACATCTCGT+TGG | - | Chr5:6780011-6780030 | MsG0580024601.01.T01:CDS | 45.0% | |
GATGGAACTTGGAAGTTTCC+AGG | - | Chr5:6780554-6780573 | MsG0580024601.01.T01:intron | 45.0% | |
GCAATTGGGAAGAAAGAGTG+GGG | - | Chr5:6780783-6780802 | MsG0580024601.01.T01:intron | 45.0% | |
GCCATTAGACACGGTAACAA+TGG | - | Chr5:6779479-6779498 | MsG0580024601.01.T01:intron | 45.0% | |
GTGTTTACATATAGGGACGG+AGG | - | Chr5:6778661-6778680 | MsG0580024601.01.T01:CDS | 45.0% | |
GTTTGGTCGCTTGGTCATTT+AGG | - | Chr5:6778852-6778871 | MsG0580024601.01.T01:CDS | 45.0% | |
TAAGCACCCTTAGAGGCAAA+TGG | - | Chr5:6778639-6778658 | MsG0580024601.01.T01:CDS | 45.0% | |
TAATCGGAGTAGACCTGAAG+TGG | + | Chr5:6780072-6780091 | None:intergenic | 45.0% | |
TACCAAGTAGTTTGGTCGCT+TGG | - | Chr5:6778843-6778862 | MsG0580024601.01.T01:CDS | 45.0% | |
TCGTGGTTATGAGCAATCGA+TGG | + | Chr5:6779423-6779442 | None:intergenic | 45.0% | |
TGCTGGAGTTGAAGGAGTAA+TGG | - | Chr5:6779557-6779576 | MsG0580024601.01.T01:CDS | 45.0% | |
TGCTTACATATAGGGACGGA+GGG | + | Chr5:6778625-6778644 | None:intergenic | 45.0% | |
TGTCTGTGTAAACCAGCTCA+GGG | + | Chr5:6779978-6779997 | None:intergenic | 45.0% | |
TTAGACACGGTAACAATGGG+AGG | - | Chr5:6779483-6779502 | MsG0580024601.01.T01:intron | 45.0% | |
TTGTCTGTGTAAACCAGCTC+AGG | + | Chr5:6779979-6779998 | None:intergenic | 45.0% | |
! | AGGGTGCTTACATATAGGGA+CGG | + | Chr5:6778629-6778648 | None:intergenic | 45.0% |
! | GAGTAATGGTTGATGCTTGG+TGG | - | Chr5:6779571-6779590 | MsG0580024601.01.T01:CDS | 45.0% |
! | GTAATGGTTGATGCTTGGTG+GGG | - | Chr5:6779573-6779592 | MsG0580024601.01.T01:CDS | 45.0% |
! | TTGATGGCATTGAAGAGTGC+TGG | - | Chr5:6779540-6779559 | MsG0580024601.01.T01:CDS | 45.0% |
!! | GAAATGTTGGTGACTCTTGC+AGG | - | Chr5:6779715-6779734 | MsG0580024601.01.T01:intron | 45.0% |
!! | TTGAAGAGTGCTGGAGTTGA+AGG | - | Chr5:6779549-6779568 | MsG0580024601.01.T01:CDS | 45.0% |
AAGTGGGACTAGGTCCATGT+GGG | - | Chr5:6780501-6780520 | MsG0580024601.01.T01:intron | 50.0% | |
AGCTGGAAGAACTCCACTTC+AGG | - | Chr5:6780056-6780075 | MsG0580024601.01.T01:CDS | 50.0% | |
AGTGAGTGACGCTTACCACT+TGG | - | Chr5:6778519-6778538 | MsG0580024601.01.T01:CDS | 50.0% | |
CAGCCCAACGAGATGTATTC+GGG | + | Chr5:6780018-6780037 | None:intergenic | 50.0% | |
GACCAAGCGACCAAACTACT+TGG | + | Chr5:6778848-6778867 | None:intergenic | 50.0% | |
GATTCAGTGCCTGTTCTAGC+TGG | - | Chr5:6780039-6780058 | MsG0580024601.01.T01:CDS | 50.0% | |
GGAGTTCTTCCAGCTAGAAC+AGG | + | Chr5:6780051-6780070 | None:intergenic | 50.0% | |
GGATATCTCAACTCCCCACA+TGG | + | Chr5:6780518-6780537 | None:intergenic | 50.0% | |
GTGCTTACATATAGGGACGG+AGG | + | Chr5:6778626-6778645 | None:intergenic | 50.0% | |
TCAAGCACCCATGGAGGTAA+AGG | + | Chr5:6779940-6779959 | None:intergenic | 50.0% | |
! | GAAGCATCAGCTGCAGCAAT+TGG | - | Chr5:6780768-6780787 | MsG0580024601.01.T01:intron | 50.0% |
! | TTAGGGCGCCTTCATCCTTT+AGG | - | Chr5:6778870-6778889 | MsG0580024601.01.T01:CDS | 50.0% |
!! | GGCTAGCTTGATCAGATCCA+GGG | - | Chr5:6778999-6779018 | MsG0580024601.01.T01:intron | 50.0% |
!! | GTTGGTGACTCTTGCAGGTA+TGG | - | Chr5:6779720-6779739 | MsG0580024601.01.T01:intron | 50.0% |
AGTGGGACTAGGTCCATGTG+GGG | - | Chr5:6780502-6780521 | MsG0580024601.01.T01:intron | 55.0% | |
CAAGTGGGACTAGGTCCATG+TGG | - | Chr5:6780500-6780519 | MsG0580024601.01.T01:intron | 55.0% | |
! | GGTTGATGCTTGGTGGGGTT+TGG | - | Chr5:6779578-6779597 | MsG0580024601.01.T01:CDS | 55.0% |
! | GTCAATGGCTTGGGTTGTCG+TGG | + | Chr5:6778726-6778745 | None:intergenic | 55.0% |
! | TTCAGAGTGCCTTCACCCTC+TGG | - | Chr5:6778787-6778806 | MsG0580024601.01.T01:CDS | 55.0% |
!! | GGGCTAGCTTGATCAGATCC+AGG | - | Chr5:6778998-6779017 | MsG0580024601.01.T01:intron | 55.0% |
! | GCCTTCACCCTCTGGCCTTT+GGG | - | Chr5:6778795-6778814 | MsG0580024601.01.T01:CDS | 60.0% |
! | TGCCTTCACCCTCTGGCCTT+TGG | - | Chr5:6778794-6778813 | MsG0580024601.01.T01:CDS | 60.0% |
CCTTTGGGCTCGACGCTCTG+GGG | - | Chr5:6778810-6778829 | MsG0580024601.01.T01:CDS | 65.0% | |
CGTCGAGCCCAAAGGCCAGA+GGG | + | Chr5:6778805-6778824 | None:intergenic | 65.0% | |
GCCCAAAGGCCAGAGGGTGA+AGG | + | Chr5:6778799-6778818 | None:intergenic | 65.0% | |
GCCTTTGGGCTCGACGCTCT+GGG | - | Chr5:6778809-6778828 | MsG0580024601.01.T01:CDS | 65.0% | |
GCGTCGAGCCCAAAGGCCAG+AGG | + | Chr5:6778806-6778825 | None:intergenic | 70.0% | |
GGCCTTTGGGCTCGACGCTC+TGG | - | Chr5:6778808-6778827 | MsG0580024601.01.T01:CDS | 70.0% | |
!! | CCCCAGAGCGTCGAGCCCAA+AGG | + | Chr5:6778813-6778832 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr5 | gene | 6778516 | 6781139 | 6778516 | ID=MsG0580024601.01;Name=MsG0580024601.01 |
Chr5 | mRNA | 6778516 | 6781139 | 6778516 | ID=MsG0580024601.01.T01;Parent=MsG0580024601.01;Name=MsG0580024601.01.T01;_AED=0.08;_eAED=0.08;_QI=0|0.75|0.6|0.8|0.75|0.8|5|0|383 |
Chr5 | exon | 6778516 | 6778905 | 6778516 | ID=MsG0580024601.01.T01:exon:29206;Parent=MsG0580024601.01.T01 |
Chr5 | exon | 6779051 | 6779161 | 6779051 | ID=MsG0580024601.01.T01:exon:29205;Parent=MsG0580024601.01.T01 |
Chr5 | exon | 6779512 | 6779722 | 6779512 | ID=MsG0580024601.01.T01:exon:29204;Parent=MsG0580024601.01.T01 |
Chr5 | exon | 6779919 | 6780354 | 6779919 | ID=MsG0580024601.01.T01:exon:29203;Parent=MsG0580024601.01.T01 |
Chr5 | exon | 6781136 | 6781139 | 6781136 | ID=MsG0580024601.01.T01:exon:29202;Parent=MsG0580024601.01.T01 |
Chr5 | CDS | 6781136 | 6781139 | 6781136 | ID=MsG0580024601.01.T01:cds;Parent=MsG0580024601.01.T01 |
Chr5 | CDS | 6779919 | 6780354 | 6779919 | ID=MsG0580024601.01.T01:cds;Parent=MsG0580024601.01.T01 |
Chr5 | CDS | 6779512 | 6779722 | 6779512 | ID=MsG0580024601.01.T01:cds;Parent=MsG0580024601.01.T01 |
Chr5 | CDS | 6779051 | 6779161 | 6779051 | ID=MsG0580024601.01.T01:cds;Parent=MsG0580024601.01.T01 |
Chr5 | CDS | 6778516 | 6778905 | 6778516 | ID=MsG0580024601.01.T01:cds;Parent=MsG0580024601.01.T01 |
Gene Sequence |
Protein sequence |