Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007960.01.T01 | XP_013463213.1 | 89.646 | 396 | 26 | 8 | 1 | 389 | 1 | 388 | 0 | 578 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007960.01.T01 | A0A072V5X1 | 89.646 | 396 | 26 | 8 | 1 | 389 | 1 | 388 | 0.0 | 578 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180004707.01 | MsG0280007960.01 | 0.807677 | 4.497216e-50 | 2.520454e-47 |
| MsG0280007960.01 | MsG0280009794.01 | 0.815406 | 9.398846e-52 | 6.474251e-49 |
| MsG0280007960.01 | MsG0280010489.01 | 0.812629 | 3.850982e-51 | 2.460872e-48 |
| MsG0280007960.01 | MsG0280011305.01 | 0.803567 | 3.278530e-49 | 1.653101e-46 |
| MsG0280007960.01 | MsG0380014778.01 | 0.802418 | 5.663372e-49 | 2.772930e-46 |
| MsG0280007960.01 | MsG0380015332.01 | 0.810888 | 9.212075e-51 | 5.620391e-48 |
| MsG0280007960.01 | MsG0380015944.01 | 0.828375 | 9.311466e-55 | 9.238403e-52 |
| MsG0280007960.01 | MsG0380016247.01 | 0.847755 | 9.460026e-60 | 1.698460e-56 |
| MsG0280007960.01 | MsG0380016920.01 | 0.811665 | 6.247891e-51 | 3.890500e-48 |
| MsG0280007960.01 | MsG0380017159.01 | 0.816496 | 5.367787e-52 | 3.809293e-49 |
| MsG0280007960.01 | MsG0480020495.01 | 0.807068 | 6.055504e-50 | 3.340462e-47 |
| MsG0280007960.01 | MsG0480020699.01 | 0.822286 | 2.569527e-53 | 2.141493e-50 |
| MsG0280007960.01 | MsG0480020739.01 | 0.803504 | 3.377592e-49 | 1.700256e-46 |
| MsG0280007960.01 | MsG0480023463.01 | 0.807341 | 5.298772e-50 | 2.943948e-47 |
| MsG0280007960.01 | MsG0480023647.01 | 0.809106 | 2.229174e-50 | 1.297289e-47 |
| MsG0280007960.01 | MsG0580027091.01 | 0.801733 | 7.832295e-49 | 3.768317e-46 |
| MsG0280007960.01 | MsG0580027431.01 | 0.805679 | 1.188076e-49 | 6.324855e-47 |
| MsG0280007960.01 | MsG0680031549.01 | 0.801930 | 7.135332e-49 | 3.450305e-46 |
| MsG0280007960.01 | MsG0780036752.01 | 0.809906 | 1.501099e-50 | 8.923216e-48 |
| MsG0280007960.01 | MsG0780037460.01 | 0.811419 | 7.069394e-51 | 4.373798e-48 |
| MsG0280007960.01 | MsG0880042091.01 | 0.813408 | 2.598241e-51 | 1.695450e-48 |
| MsG0280007960.01 | MsG0880044782.01 | 0.814257 | 1.689459e-51 | 1.128059e-48 |
| MsG0280007960.01 | MsG0880045294.01 | 0.801507 | 8.714783e-49 | 4.169196e-46 |
| MsG0280007960.01 | MsG0880045483.01 | 0.806364 | 8.526807e-50 | 4.619281e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007960.01.T01 | MTR_2g436340 | 89.646 | 396 | 26 | 8 | 1 | 389 | 1 | 388 | 0.0 | 578 |
| MsG0280007960.01.T01 | MTR_4g120050 | 43.668 | 458 | 153 | 18 | 6 | 389 | 25 | 451 | 2.70e-72 | 233 |
| MsG0280007960.01.T01 | MTR_4g120050 | 43.668 | 458 | 153 | 18 | 6 | 389 | 19 | 445 | 2.77e-72 | 233 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007960.01.T01 | AT3G06868 | 44.020 | 393 | 156 | 15 | 20 | 388 | 16 | 368 | 1.52e-67 | 218 |
| MsG0280007960.01.T01 | AT5G49100 | 40.816 | 441 | 158 | 16 | 4 | 388 | 2 | 395 | 1.30e-59 | 198 |
Find 70 sgRNAs with CRISPR-Local
Find 85 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTCTTCATCTTCTTATTT+TGG | 0.103676 | 2:+23749867 | MsG0280007960.01.T01:CDS |
| TCATCTTCTGCTGTTGTTAC+TGG | 0.228941 | 2:+23749759 | MsG0280007960.01.T01:CDS |
| TTGTTCTTGTTATTCTTCTT+TGG | 0.251117 | 2:-23749195 | None:intergenic |
| GACAAAATCTCAACTGGGTT+TGG | 0.267561 | 2:+23749678 | MsG0280007960.01.T01:CDS |
| TCAGGAAACTTGGTTCTTCT+TGG | 0.272941 | 2:-23749315 | None:intergenic |
| GAAGCTTCTGGTTCAAGTTC+TGG | 0.276132 | 2:+23749567 | MsG0280007960.01.T01:CDS |
| AAAACCCTGCAGCAAGAAAA+TGG | 0.277792 | 2:+23749422 | MsG0280007960.01.T01:CDS |
| ATGAAGAAGATGGAAGAGTT+TGG | 0.291209 | 2:-23749089 | None:intergenic |
| TTCTTTGACAAAATCTCAAC+TGG | 0.294965 | 2:+23749672 | MsG0280007960.01.T01:CDS |
| GAAGATGAAGGAGTTATTAT+AGG | 0.296939 | 2:-23749030 | None:intergenic |
| TCTGCTGTTGTTACTGGAAA+TGG | 0.303007 | 2:+23749765 | MsG0280007960.01.T01:CDS |
| TAGAGGTAGTAGGGGTAGTT+GGG | 0.338546 | 2:+23749899 | MsG0280007960.01.T01:CDS |
| GTGAAGTGTGGTGGAATATT+TGG | 0.343193 | 2:+23749816 | MsG0280007960.01.T01:CDS |
| TCTGGTTCAAGTTCTGGTTC+TGG | 0.346626 | 2:+23749573 | MsG0280007960.01.T01:CDS |
| AAGTTCTGGTTCTGGTGGTT+TGG | 0.357183 | 2:+23749581 | MsG0280007960.01.T01:CDS |
| GAGGAAGAAGAAGAAGCTTC+TGG | 0.374770 | 2:+23749555 | MsG0280007960.01.T01:CDS |
| GGTTTCACAGTTGAGATCCT+TGG | 0.390722 | 2:-23749480 | None:intergenic |
| AGGTTTCATGTTCATGTTGA+TGG | 0.393619 | 2:-23749229 | None:intergenic |
| TGAAGAAGATGGAAGAGTTT+GGG | 0.403722 | 2:-23749088 | None:intergenic |
| GTAGAGGTAGTAGGGGTAGT+TGG | 0.405063 | 2:+23749898 | MsG0280007960.01.T01:CDS |
| GTGATGATGGTAGAGGTAGT+AGG | 0.405714 | 2:+23749889 | MsG0280007960.01.T01:CDS |
| CACGTTTGGTTGAAGTTTGA+GGG | 0.419267 | 2:-23749137 | None:intergenic |
| CCTACTGAAGAACAAAACTT+TGG | 0.422944 | 2:-23749501 | None:intergenic |
| TGTGGTAGCAGAAGCTTCTC+TGG | 0.436507 | 2:+23749645 | MsG0280007960.01.T01:CDS |
| TTCTTCTTTGGTAAGAGAAA+AGG | 0.439746 | 2:-23749183 | None:intergenic |
| TAGTAGGGGTAGTTGGGGCT+GGG | 0.445281 | 2:+23749905 | MsG0280007960.01.T01:CDS |
| ATCATCATCATCAGGAAACT+TGG | 0.446552 | 2:-23749325 | None:intergenic |
| TCACGTTTGGTTGAAGTTTG+AGG | 0.453041 | 2:-23749138 | None:intergenic |
| AGAGAAGAAGATGAAGAAGA+TGG | 0.455088 | 2:-23749099 | None:intergenic |
| TTACTGCTAAAAGCTCTCAT+AGG | 0.455397 | 2:-23749939 | None:intergenic |
| AAATGGAAGAAAAGAGCTAC+AGG | 0.455904 | 2:+23749439 | MsG0280007960.01.T01:CDS |
| TGATGATGGTAGAGGTAGTA+GGG | 0.469192 | 2:+23749890 | MsG0280007960.01.T01:CDS |
| CCTCTTGCAGTAAGCAATGA+AGG | 0.472806 | 2:-23750020 | None:intergenic |
| GTAGTAGGGGTAGTTGGGGC+TGG | 0.475004 | 2:+23749904 | MsG0280007960.01.T01:CDS |
| GTTTCAAGATCCAGATCTGT+TGG | 0.487652 | 2:+23749621 | MsG0280007960.01.T01:CDS |
| CCTTCATTGCTTACTGCAAG+AGG | 0.489840 | 2:+23750020 | MsG0280007960.01.T01:CDS |
| GAAGGAGTTATTATAGGTAA+AGG | 0.490350 | 2:-23749024 | None:intergenic |
| CATGGTAGTTGAAGAAGAAG+AGG | 0.495452 | 2:+23749536 | MsG0280007960.01.T01:CDS |
| GCTACCACATCCAACAGATC+TGG | 0.498213 | 2:-23749631 | None:intergenic |
| GTATGCGTGAACGGCTATGA+TGG | 0.502497 | 2:-23749161 | None:intergenic |
| GAAAGAGAAGAAGAAGATGA+AGG | 0.510083 | 2:-23749042 | None:intergenic |
| GAAGATGCAATATTCAATGA+TGG | 0.516219 | 2:+23748895 | MsG0280007960.01.T01:CDS |
| GGTTCAAGTTCTGGTTCTGG+TGG | 0.527514 | 2:+23749576 | MsG0280007960.01.T01:CDS |
| GAAGGAACAGCTGACAAACT+TGG | 0.529020 | 2:-23750002 | None:intergenic |
| ACGGCTATGATGGTCACGTT+TGG | 0.537766 | 2:-23749151 | None:intergenic |
| AGAATCTCAACGTGAAGGCA+AGG | 0.549244 | 2:+23749722 | MsG0280007960.01.T01:CDS |
| GGTTCTTCTTGGTGTAGCTG+TGG | 0.553014 | 2:-23749304 | None:intergenic |
| AGAGGTAGTAGGGGTAGTTG+GGG | 0.553773 | 2:+23749900 | MsG0280007960.01.T01:CDS |
| ACATTAGCTGAAGAAGATGA+AGG | 0.554287 | 2:-23749249 | None:intergenic |
| TGAAGTTTGAGGGACAATGA+TGG | 0.561249 | 2:-23749127 | None:intergenic |
| AGTGTGGTGGAATATTTGGT+GGG | 0.564852 | 2:+23749820 | MsG0280007960.01.T01:CDS |
| AGAGTTTGGGATCTGAAAGA+AGG | 0.574748 | 2:-23749075 | None:intergenic |
| AGATCCAGATCTGTTGGATG+TGG | 0.574879 | 2:+23749627 | MsG0280007960.01.T01:CDS |
| TTTGGAACAAGAACAACGTA+AGG | 0.582596 | 2:+23749599 | MsG0280007960.01.T01:CDS |
| AAATATTCAACACTGCATGA+AGG | 0.585784 | 2:+23749788 | MsG0280007960.01.T01:CDS |
| AGAGAAAAGGTATGCGTGAA+CGG | 0.585842 | 2:-23749170 | None:intergenic |
| GAATCTCAACGTGAAGGCAA+GGG | 0.603670 | 2:+23749723 | MsG0280007960.01.T01:CDS |
| GGTTTGGAGATTGTACACTA+AGG | 0.606378 | 2:+23749694 | MsG0280007960.01.T01:CDS |
| AAGTGTGGTGGAATATTTGG+TGG | 0.607838 | 2:+23749819 | MsG0280007960.01.T01:CDS |
| GTTTGGGATCTGAAAGAAGG+TGG | 0.624652 | 2:-23749072 | None:intergenic |
| GATGATGATGATAAAGCAGA+AGG | 0.626457 | 2:+23749342 | MsG0280007960.01.T01:CDS |
| AGAGTAGAATCTCAACGTGA+AGG | 0.633094 | 2:+23749717 | MsG0280007960.01.T01:CDS |
| TCTTTGACAAAATCTCAACT+GGG | 0.633654 | 2:+23749673 | MsG0280007960.01.T01:CDS |
| TTGATAGTAACAGTAGTCCA+AGG | 0.636956 | 2:+23749463 | MsG0280007960.01.T01:CDS |
| AAGGAAAGAGTGAAGTGTGG+TGG | 0.639020 | 2:+23749807 | MsG0280007960.01.T01:CDS |
| TTCATGTTGATGGAAGATGA+AGG | 0.640282 | 2:-23749219 | None:intergenic |
| GATGATGGTAGAGGTAGTAG+GGG | 0.647310 | 2:+23749891 | MsG0280007960.01.T01:CDS |
| AATGGAAGAAAAGAGCTACA+GGG | 0.686527 | 2:+23749440 | MsG0280007960.01.T01:CDS |
| AGTAGGAAGAAACTGTGACA+TGG | 0.706316 | 2:+23749518 | MsG0280007960.01.T01:CDS |
| ATGAAGGAAAGAGTGAAGTG+TGG | 0.774179 | 2:+23749804 | MsG0280007960.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTTGTCTTCAAGAAAAACT+TGG | + | Chr2:23748979-23748998 | MsG0280007960.01.T01:CDS | 25.0% |
| !!! | TCTTCTTCATCTTCTTATTT+TGG | + | Chr2:23749867-23749886 | MsG0280007960.01.T01:CDS | 25.0% |
| !!! | TTGTTCTTGTTATTCTTCTT+TGG | - | Chr2:23749198-23749217 | None:intergenic | 25.0% |
| AAATATTCAACACTGCATGA+AGG | + | Chr2:23749788-23749807 | MsG0280007960.01.T01:CDS | 30.0% | |
| GAAGATGAAGGAGTTATTAT+AGG | - | Chr2:23749033-23749052 | None:intergenic | 30.0% | |
| GAAGATGCAATATTCAATGA+TGG | + | Chr2:23748895-23748914 | MsG0280007960.01.T01:CDS | 30.0% | |
| GAAGGAGTTATTATAGGTAA+AGG | - | Chr2:23749027-23749046 | None:intergenic | 30.0% | |
| GATGAAGAAAAGACCAAAAA+CGG | - | Chr2:23749392-23749411 | None:intergenic | 30.0% | |
| TCTTTGACAAAATCTCAACT+GGG | + | Chr2:23749673-23749692 | MsG0280007960.01.T01:CDS | 30.0% | |
| TTATCATCATCATCATCATC+AGG | - | Chr2:23749336-23749355 | None:intergenic | 30.0% | |
| TTCTTCTTTGGTAAGAGAAA+AGG | - | Chr2:23749186-23749205 | None:intergenic | 30.0% | |
| TTCTTTGACAAAATCTCAAC+TGG | + | Chr2:23749672-23749691 | MsG0280007960.01.T01:CDS | 30.0% | |
| !!! | TCTTCTTATTTTGGTGATGA+TGG | + | Chr2:23749876-23749895 | MsG0280007960.01.T01:CDS | 30.0% |
| AAATGGAAGAAAAGAGCTAC+AGG | + | Chr2:23749439-23749458 | MsG0280007960.01.T01:CDS | 35.0% | |
| AATGGAAGAAAAGAGCTACA+GGG | + | Chr2:23749440-23749459 | MsG0280007960.01.T01:CDS | 35.0% | |
| ACATTAGCTGAAGAAGATGA+AGG | - | Chr2:23749252-23749271 | None:intergenic | 35.0% | |
| AGAGAAGAAGATGAAGAAGA+TGG | - | Chr2:23749102-23749121 | None:intergenic | 35.0% | |
| AGGTTTCATGTTCATGTTGA+TGG | - | Chr2:23749232-23749251 | None:intergenic | 35.0% | |
| ATCATCATCATCAGGAAACT+TGG | - | Chr2:23749328-23749347 | None:intergenic | 35.0% | |
| ATGAAGAAGATGGAAGAGTT+TGG | - | Chr2:23749092-23749111 | None:intergenic | 35.0% | |
| CATCCTAACAAAAAAAACCC+TGG | + | Chr2:23748943-23748962 | MsG0280007960.01.T01:CDS | 35.0% | |
| CCTACTGAAGAACAAAACTT+TGG | - | Chr2:23749504-23749523 | None:intergenic | 35.0% | |
| GAAAGAGAAGAAGAAGATGA+AGG | - | Chr2:23749045-23749064 | None:intergenic | 35.0% | |
| TGAAGAAGATGGAAGAGTTT+GGG | - | Chr2:23749091-23749110 | None:intergenic | 35.0% | |
| TTACTGCTAAAAGCTCTCAT+AGG | - | Chr2:23749942-23749961 | None:intergenic | 35.0% | |
| ! | AAAAAGCACATATACCACCA+GGG | - | Chr2:23748963-23748982 | None:intergenic | 35.0% |
| ! | CTAGAAAGAGAAACCGTTTT+TGG | + | Chr2:23749376-23749395 | MsG0280007960.01.T01:CDS | 35.0% |
| ! | GATGATGATGATAAAGCAGA+AGG | + | Chr2:23749342-23749361 | MsG0280007960.01.T01:CDS | 35.0% |
| ! | TTCATGTTGATGGAAGATGA+AGG | - | Chr2:23749222-23749241 | None:intergenic | 35.0% |
| ! | TTGATAGTAACAGTAGTCCA+AGG | + | Chr2:23749463-23749482 | MsG0280007960.01.T01:CDS | 35.0% |
| ! | TTTGGAACAAGAACAACGTA+AGG | + | Chr2:23749599-23749618 | MsG0280007960.01.T01:CDS | 35.0% |
| !!! | CAGGGTTTTTTTTGTTAGGA+TGG | - | Chr2:23748945-23748964 | None:intergenic | 35.0% |
| !!! | CCAAAGTTTTGTTCTTCAGT+AGG | + | Chr2:23749501-23749520 | MsG0280007960.01.T01:CDS | 35.0% |
| !!! | TATTTTGGTGATGATGGTAG+AGG | + | Chr2:23749882-23749901 | MsG0280007960.01.T01:CDS | 35.0% |
| AAAACCCTGCAGCAAGAAAA+TGG | + | Chr2:23749422-23749441 | MsG0280007960.01.T01:CDS | 40.0% | |
| AGAGTAGAATCTCAACGTGA+AGG | + | Chr2:23749717-23749736 | MsG0280007960.01.T01:CDS | 40.0% | |
| AGTAGGAAGAAACTGTGACA+TGG | + | Chr2:23749518-23749537 | MsG0280007960.01.T01:CDS | 40.0% | |
| ATGAAGGAAAGAGTGAAGTG+TGG | + | Chr2:23749804-23749823 | MsG0280007960.01.T01:CDS | 40.0% | |
| CACGTTTGGTTGAAGTTTGA+GGG | - | Chr2:23749140-23749159 | None:intergenic | 40.0% | |
| CATGGTAGTTGAAGAAGAAG+AGG | + | Chr2:23749536-23749555 | MsG0280007960.01.T01:CDS | 40.0% | |
| CCTAACAAAAAAAACCCTGG+TGG | + | Chr2:23748946-23748965 | MsG0280007960.01.T01:CDS | 40.0% | |
| GACAAAATCTCAACTGGGTT+TGG | + | Chr2:23749678-23749697 | MsG0280007960.01.T01:CDS | 40.0% | |
| GGTTTGGAGATTGTACACTA+AGG | + | Chr2:23749694-23749713 | MsG0280007960.01.T01:CDS | 40.0% | |
| GTTTCAAGATCCAGATCTGT+TGG | + | Chr2:23749621-23749640 | MsG0280007960.01.T01:CDS | 40.0% | |
| TCACGTTTGGTTGAAGTTTG+AGG | - | Chr2:23749141-23749160 | None:intergenic | 40.0% | |
| TCATCTTCTGCTGTTGTTAC+TGG | + | Chr2:23749759-23749778 | MsG0280007960.01.T01:CDS | 40.0% | |
| TCTGCTGTTGTTACTGGAAA+TGG | + | Chr2:23749765-23749784 | MsG0280007960.01.T01:CDS | 40.0% | |
| TGAAGTTTGAGGGACAATGA+TGG | - | Chr2:23749130-23749149 | None:intergenic | 40.0% | |
| ! | AAGTGTGGTGGAATATTTGG+TGG | + | Chr2:23749819-23749838 | MsG0280007960.01.T01:CDS | 40.0% |
| ! | AGAGAAAAGGTATGCGTGAA+CGG | - | Chr2:23749173-23749192 | None:intergenic | 40.0% |
| ! | AGAGTTTGGGATCTGAAAGA+AGG | - | Chr2:23749078-23749097 | None:intergenic | 40.0% |
| ! | AGTGTGGTGGAATATTTGGT+GGG | + | Chr2:23749820-23749839 | MsG0280007960.01.T01:CDS | 40.0% |
| ! | CAAAAAGCACATATACCACC+AGG | - | Chr2:23748964-23748983 | None:intergenic | 40.0% |
| ! | GTGAAGTGTGGTGGAATATT+TGG | + | Chr2:23749816-23749835 | MsG0280007960.01.T01:CDS | 40.0% |
| ! | TCAGGAAACTTGGTTCTTCT+TGG | - | Chr2:23749318-23749337 | None:intergenic | 40.0% |
| ! | TCTTCCATTTTCTTGCTGCA+GGG | - | Chr2:23749429-23749448 | None:intergenic | 40.0% |
| ! | TTCTTCCATTTTCTTGCTGC+AGG | - | Chr2:23749430-23749449 | None:intergenic | 40.0% |
| !! | TGATGATGGTAGAGGTAGTA+GGG | + | Chr2:23749890-23749909 | MsG0280007960.01.T01:CDS | 40.0% |
| !!! | CCACCAGGGTTTTTTTTGTT+AGG | - | Chr2:23748949-23748968 | None:intergenic | 40.0% |
| AAGGAAAGAGTGAAGTGTGG+TGG | + | Chr2:23749807-23749826 | MsG0280007960.01.T01:CDS | 45.0% | |
| AGAATCTCAACGTGAAGGCA+AGG | + | Chr2:23749722-23749741 | MsG0280007960.01.T01:CDS | 45.0% | |
| AGATCCAGATCTGTTGGATG+TGG | + | Chr2:23749627-23749646 | MsG0280007960.01.T01:CDS | 45.0% | |
| CCTCTTGCAGTAAGCAATGA+AGG | - | Chr2:23750023-23750042 | None:intergenic | 45.0% | |
| CCTTCATTGCTTACTGCAAG+AGG | + | Chr2:23750020-23750039 | MsG0280007960.01.T01:CDS | 45.0% | |
| GAAGGAACAGCTGACAAACT+TGG | - | Chr2:23750005-23750024 | None:intergenic | 45.0% | |
| GAATCTCAACGTGAAGGCAA+GGG | + | Chr2:23749723-23749742 | MsG0280007960.01.T01:CDS | 45.0% | |
| GAGGAAGAAGAAGAAGCTTC+TGG | + | Chr2:23749555-23749574 | MsG0280007960.01.T01:CDS | 45.0% | |
| GGTTTCACAGTTGAGATCCT+TGG | - | Chr2:23749483-23749502 | None:intergenic | 45.0% | |
| TAGAGGTAGTAGGGGTAGTT+GGG | + | Chr2:23749899-23749918 | MsG0280007960.01.T01:CDS | 45.0% | |
| ! | GATGATGGTAGAGGTAGTAG+GGG | + | Chr2:23749891-23749910 | MsG0280007960.01.T01:CDS | 45.0% |
| ! | GTTTGGGATCTGAAAGAAGG+TGG | - | Chr2:23749075-23749094 | None:intergenic | 45.0% |
| !! | AAGTTCTGGTTCTGGTGGTT+TGG | + | Chr2:23749581-23749600 | MsG0280007960.01.T01:CDS | 45.0% |
| !! | GAAGCTTCTGGTTCAAGTTC+TGG | + | Chr2:23749567-23749586 | MsG0280007960.01.T01:CDS | 45.0% |
| !! | GTGATGATGGTAGAGGTAGT+AGG | + | Chr2:23749889-23749908 | MsG0280007960.01.T01:CDS | 45.0% |
| !! | TCTGGTTCAAGTTCTGGTTC+TGG | + | Chr2:23749573-23749592 | MsG0280007960.01.T01:CDS | 45.0% |
| ACGGCTATGATGGTCACGTT+TGG | - | Chr2:23749154-23749173 | None:intergenic | 50.0% | |
| AGAGGTAGTAGGGGTAGTTG+GGG | + | Chr2:23749900-23749919 | MsG0280007960.01.T01:CDS | 50.0% | |
| GCTACCACATCCAACAGATC+TGG | - | Chr2:23749634-23749653 | None:intergenic | 50.0% | |
| GTAGAGGTAGTAGGGGTAGT+TGG | + | Chr2:23749898-23749917 | MsG0280007960.01.T01:CDS | 50.0% | |
| GTATGCGTGAACGGCTATGA+TGG | - | Chr2:23749164-23749183 | None:intergenic | 50.0% | |
| TGTGGTAGCAGAAGCTTCTC+TGG | + | Chr2:23749645-23749664 | MsG0280007960.01.T01:CDS | 50.0% | |
| ! | GGTTCTTCTTGGTGTAGCTG+TGG | - | Chr2:23749307-23749326 | None:intergenic | 50.0% |
| !! | GGTTCAAGTTCTGGTTCTGG+TGG | + | Chr2:23749576-23749595 | MsG0280007960.01.T01:CDS | 50.0% |
| TAGTAGGGGTAGTTGGGGCT+GGG | + | Chr2:23749905-23749924 | MsG0280007960.01.T01:CDS | 55.0% | |
| GTAGTAGGGGTAGTTGGGGC+TGG | + | Chr2:23749904-23749923 | MsG0280007960.01.T01:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr2 | gene | 23748877 | 23750046 | 23748877 | ID=MsG0280007960.01;Name=MsG0280007960.01 |
| Chr2 | mRNA | 23748877 | 23750046 | 23748877 | ID=MsG0280007960.01.T01;Parent=MsG0280007960.01;Name=MsG0280007960.01.T01;_AED=0.28;_eAED=0.28;_QI=0|-1|0|1|-1|1|1|0|389 |
| Chr2 | exon | 23748877 | 23750046 | 23748877 | ID=MsG0280007960.01.T01:exon:40512;Parent=MsG0280007960.01.T01 |
| Chr2 | CDS | 23748877 | 23750046 | 23748877 | ID=MsG0280007960.01.T01:cds;Parent=MsG0280007960.01.T01 |
| Gene Sequence |
| Protein sequence |
