Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880042091.01.T01 | XP_003626872.1 | 99.315 | 146 | 1 | 0 | 1 | 146 | 1 | 146 | 7.33E-106 | 308 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880042091.01.T01 | G7LEC4 | 99.315 | 146 | 1 | 0 | 1 | 146 | 1 | 146 | 3.50e-106 | 308 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048291.01 | MsG0880042091.01 | 0.812120 | 4.973576e-51 | 3.135225e-48 |
| MsG0080048856.01 | MsG0880042091.01 | 0.839525 | 1.504059e-57 | 2.082520e-54 |
| MsG0180000139.01 | MsG0880042091.01 | 0.820346 | 7.201296e-53 | 5.683503e-50 |
| MsG0180000145.01 | MsG0880042091.01 | 0.826847 | 2.166691e-54 | 2.055863e-51 |
| MsG0180000334.01 | MsG0880042091.01 | 0.815387 | 9.490546e-52 | 6.534107e-49 |
| MsG0180000557.01 | MsG0880042091.01 | 0.820568 | 6.401933e-53 | 5.083645e-50 |
| MsG0180000835.01 | MsG0880042091.01 | 0.809720 | 1.646036e-50 | 9.737278e-48 |
| MsG0180001828.01 | MsG0880042091.01 | 0.800157 | 1.644135e-48 | 7.600812e-46 |
| MsG0180001892.01 | MsG0880042091.01 | 0.809669 | 1.687701e-50 | 9.970485e-48 |
| MsG0180002377.01 | MsG0880042091.01 | 0.813088 | 3.054320e-51 | 1.975608e-48 |
| MsG0180003094.01 | MsG0880042091.01 | 0.832706 | 8.110888e-56 | 9.138709e-53 |
| MsG0180003455.01 | MsG0880042091.01 | 0.826378 | 2.803194e-54 | 2.624579e-51 |
| MsG0180003651.01 | MsG0880042091.01 | 0.812851 | 3.443714e-51 | 2.213367e-48 |
| MsG0180003858.01 | MsG0880042091.01 | 0.815145 | 1.073757e-51 | 7.343445e-49 |
| MsG0180003920.01 | MsG0880042091.01 | 0.823809 | 1.133895e-53 | 9.866945e-51 |
| MsG0180003951.01 | MsG0880042091.01 | 0.827288 | 1.699758e-54 | 1.633861e-51 |
| MsG0180004099.01 | MsG0880042091.01 | 0.828438 | 8.990560e-55 | 8.936513e-52 |
| MsG0180004389.01 | MsG0880042091.01 | 0.809964 | 1.458206e-50 | 8.681750e-48 |
| MsG0180004463.01 | MsG0880042091.01 | 0.803310 | 3.705914e-49 | 1.856120e-46 |
| MsG0180004754.01 | MsG0880042091.01 | 0.847493 | 1.116924e-59 | 1.988778e-56 |
| MsG0180005531.01 | MsG0880042091.01 | 0.807112 | 5.926732e-50 | 3.273086e-47 |
| MsG0180005575.01 | MsG0880042091.01 | 0.817442 | 3.291157e-52 | 2.397122e-49 |
| MsG0280006405.01 | MsG0880042091.01 | 0.809475 | 1.857845e-50 | 1.091848e-47 |
| MsG0780040669.01 | MsG0880042091.01 | 0.836346 | 9.876016e-57 | 1.241278e-53 |
| MsG0780040926.01 | MsG0880042091.01 | 0.817457 | 3.265895e-52 | 2.379725e-49 |
| MsG0780041016.01 | MsG0880042091.01 | 0.802298 | 5.994058e-49 | 2.925909e-46 |
| MsG0880041986.01 | MsG0880042091.01 | 0.850860 | 1.292411e-60 | 2.566848e-57 |
| MsG0880042090.01 | MsG0880042091.01 | 0.809693 | 1.668078e-50 | 9.860564e-48 |
| MsG0880042091.01 | MsG0880042129.01 | 0.802646 | 5.081993e-49 | 2.502590e-46 |
| MsG0880042091.01 | MsG0880042412.01 | 0.873711 | 1.190029e-67 | 5.215242e-64 |
| MsG0880042091.01 | MsG0880042544.01 | 0.817090 | 3.948808e-52 | 2.848421e-49 |
| MsG0880042091.01 | MsG0880042813.01 | 0.806527 | 7.877768e-50 | 4.285499e-47 |
| MsG0880042091.01 | MsG0880042836.01 | 0.810144 | 1.333761e-50 | 7.977823e-48 |
| MsG0880042091.01 | MsG0880043614.01 | 0.821002 | 5.089124e-53 | 4.090826e-50 |
| MsG0880042091.01 | MsG0880043992.01 | 0.815559 | 8.687737e-52 | 6.009746e-49 |
| MsG0880042091.01 | MsG0880044008.01 | 0.811829 | 5.756318e-51 | 3.600138e-48 |
| MsG0880042091.01 | MsG0880044555.01 | 0.810117 | 1.351937e-50 | 8.081182e-48 |
| MsG0880042091.01 | MsG0880044782.01 | 0.845804 | 3.230841e-59 | 5.448917e-56 |
| MsG0880042091.01 | MsG0880045294.01 | 0.847015 | 1.510455e-59 | 2.648334e-56 |
| MsG0880042091.01 | MsG0880045453.01 | 0.814181 | 1.755921e-51 | 1.170014e-48 |
| MsG0880042091.01 | MsG0880045483.01 | 0.813292 | 2.756384e-51 | 1.792845e-48 |
| MsG0880042091.01 | MsG0880046012.01 | 0.828912 | 6.904714e-55 | 6.957868e-52 |
| MsG0280010650.01 | MsG0880042091.01 | 0.818638 | 1.766001e-52 | 1.329163e-49 |
| MsG0280010779.01 | MsG0880042091.01 | 0.826313 | 2.904636e-54 | 2.714413e-51 |
| MsG0280010788.01 | MsG0880042091.01 | 0.833270 | 5.871649e-56 | 6.727931e-53 |
| MsG0280010907.01 | MsG0880042091.01 | 0.825660 | 4.153147e-54 | 3.809584e-51 |
| MsG0280010977.01 | MsG0880042091.01 | 0.824599 | 7.397102e-54 | 6.583310e-51 |
| MsG0280011014.01 | MsG0880042091.01 | 0.809980 | 1.446600e-50 | 8.616269e-48 |
| MsG0280011101.01 | MsG0880042091.01 | 0.811465 | 6.905789e-51 | 4.277848e-48 |
| MsG0280011258.01 | MsG0880042091.01 | 0.809717 | 1.648090e-50 | 9.748698e-48 |
| MsG0280011282.01 | MsG0880042091.01 | 0.809281 | 2.044531e-50 | 1.195420e-47 |
| MsG0280011305.01 | MsG0880042091.01 | 0.841820 | 3.769122e-58 | 5.604299e-55 |
| MsG0280011339.01 | MsG0880042091.01 | 0.840484 | 8.459012e-58 | 1.206615e-54 |
| MsG0280011341.01 | MsG0880042091.01 | 0.830208 | 3.343289e-55 | 3.499199e-52 |
| MsG0280011388.01 | MsG0880042091.01 | 0.817222 | 3.687518e-52 | 2.669582e-49 |
| MsG0280011416.01 | MsG0880042091.01 | 0.826205 | 3.082768e-54 | 2.872000e-51 |
| MsG0380013475.01 | MsG0880042091.01 | 0.846066 | 2.742967e-59 | 4.664730e-56 |
| MsG0380013476.01 | MsG0880042091.01 | 0.827261 | 1.724720e-54 | 1.656615e-51 |
| MsG0380013549.01 | MsG0880042091.01 | 0.840447 | 8.648560e-58 | 1.232290e-54 |
| MsG0380014495.01 | MsG0880042091.01 | 0.811716 | 6.091159e-51 | 3.798161e-48 |
| MsG0380014537.01 | MsG0880042091.01 | 0.808410 | 3.139713e-50 | 1.793921e-47 |
| MsG0380014778.01 | MsG0880042091.01 | 0.821516 | 3.873326e-53 | 3.157920e-50 |
| MsG0680030865.01 | MsG0880042091.01 | 0.819340 | 1.222946e-52 | 9.384136e-50 |
| MsG0680031431.01 | MsG0880042091.01 | 0.814637 | 1.392274e-51 | 9.392518e-49 |
| MsG0680031488.01 | MsG0880042091.01 | 0.821138 | 4.734919e-53 | 3.820215e-50 |
| MsG0680031506.01 | MsG0880042091.01 | 0.801035 | 1.088934e-48 | 5.148002e-46 |
| MsG0680031549.01 | MsG0880042091.01 | 0.815101 | 1.098233e-51 | 7.501730e-49 |
| MsG0680032935.01 | MsG0880042091.01 | 0.813014 | 3.170612e-51 | 2.046849e-48 |
| MsG0480019350.01 | MsG0880042091.01 | 0.862277 | 5.680512e-64 | 1.654132e-60 |
| MsG0480019710.01 | MsG0880042091.01 | 0.821067 | 4.915427e-53 | 3.958373e-50 |
| MsG0480020699.01 | MsG0880042091.01 | 0.836002 | 1.207604e-56 | 1.501958e-53 |
| MsG0480020739.01 | MsG0880042091.01 | 0.826193 | 3.102500e-54 | 2.889417e-51 |
| MsG0480020780.01 | MsG0880042091.01 | 0.804081 | 2.562942e-49 | 1.309433e-46 |
| MsG0480020847.01 | MsG0880042091.01 | 0.811326 | 7.405280e-51 | 4.570063e-48 |
| MsG0480020909.01 | MsG0880042091.01 | 0.822882 | 1.867049e-53 | 1.582573e-50 |
| MsG0480021056.01 | MsG0880042091.01 | 0.809110 | 2.225241e-50 | 1.295148e-47 |
| MsG0480021138.01 | MsG0880042091.01 | 0.848782 | 4.921895e-60 | 9.134198e-57 |
| MsG0480022045.01 | MsG0880042091.01 | 0.847447 | 1.150156e-59 | 2.044908e-56 |
| MsG0480022788.01 | MsG0880042091.01 | 0.826849 | 2.164147e-54 | 2.053563e-51 |
| MsG0480022855.01 | MsG0880042091.01 | 0.832327 | 1.007051e-55 | 1.121781e-52 |
| MsG0480023463.01 | MsG0880042091.01 | 0.862052 | 6.660139e-64 | 1.924211e-60 |
| MsG0480023488.01 | MsG0880042091.01 | 0.801285 | 9.676859e-49 | 4.603597e-46 |
| MsG0480023657.01 | MsG0880042091.01 | 0.814555 | 1.451629e-51 | 9.771282e-49 |
| MsG0580024463.01 | MsG0880042091.01 | 0.816103 | 6.570069e-52 | 4.613157e-49 |
| MsG0580025332.01 | MsG0880042091.01 | 0.805700 | 1.175901e-49 | 6.263651e-47 |
| MsG0580026059.01 | MsG0880042091.01 | 0.828433 | 9.016179e-55 | 8.960615e-52 |
| MsG0580026081.01 | MsG0880042091.01 | 0.813099 | 3.038325e-51 | 1.965770e-48 |
| MsG0380015196.01 | MsG0880042091.01 | 0.827626 | 1.410110e-54 | 1.368596e-51 |
| MsG0380015332.01 | MsG0880042091.01 | 0.834081 | 3.682451e-56 | 4.323305e-53 |
| MsG0380015363.01 | MsG0880042091.01 | 0.822768 | 1.985392e-53 | 1.677541e-50 |
| MsG0380015555.01 | MsG0880042091.01 | 0.819531 | 1.106079e-52 | 8.534112e-50 |
| MsG0380015631.01 | MsG0880042091.01 | 0.823799 | 1.140076e-53 | 9.917939e-51 |
| MsG0380015677.01 | MsG0880042091.01 | 0.835549 | 1.573234e-56 | 1.930138e-53 |
| MsG0380015786.01 | MsG0880042091.01 | 0.823298 | 1.493810e-53 | 1.281104e-50 |
| MsG0380015944.01 | MsG0880042091.01 | 0.847386 | 1.194839e-59 | 2.120235e-56 |
| MsG0380016126.01 | MsG0880042091.01 | 0.817867 | 2.638854e-52 | 1.944470e-49 |
| MsG0380016140.01 | MsG0880042091.01 | 0.816710 | 4.806696e-52 | 3.431244e-49 |
| MsG0380016247.01 | MsG0880042091.01 | 0.844477 | 7.379477e-59 | 1.192828e-55 |
| MsG0380016893.01 | MsG0880042091.01 | 0.809233 | 2.093317e-50 | 1.222418e-47 |
| MsG0380016920.01 | MsG0880042091.01 | 0.819749 | 9.863791e-53 | 7.656700e-50 |
| MsG0380016970.01 | MsG0880042091.01 | 0.816555 | 5.206718e-52 | 3.701093e-49 |
| MsG0380016994.01 | MsG0880042091.01 | 0.852621 | 4.094417e-61 | 8.605782e-58 |
| MsG0380017061.01 | MsG0880042091.01 | 0.807149 | 5.819628e-50 | 3.217115e-47 |
| MsG0380017159.01 | MsG0880042091.01 | 0.854339 | 1.315082e-61 | 2.927308e-58 |
| MsG0380017559.01 | MsG0880042091.01 | 0.811080 | 8.372096e-51 | 5.133693e-48 |
| MsG0380017996.01 | MsG0880042091.01 | 0.851455 | 8.779569e-61 | 1.777965e-57 |
| MsG0480018183.01 | MsG0880042091.01 | 0.801132 | 1.040020e-48 | 4.928845e-46 |
| MsG0480018278.01 | MsG0880042091.01 | 0.803689 | 3.092423e-49 | 1.564067e-46 |
| MsG0480018313.01 | MsG0880042091.01 | 0.832208 | 1.077858e-55 | 1.196499e-52 |
| MsG0580026593.01 | MsG0880042091.01 | 0.836990 | 6.766522e-57 | 8.670359e-54 |
| MsG0580027091.01 | MsG0880042091.01 | 0.812114 | 4.989251e-51 | 3.144552e-48 |
| MsG0580027431.01 | MsG0880042091.01 | 0.864289 | 1.353440e-64 | 4.227515e-61 |
| MsG0580028060.01 | MsG0880042091.01 | 0.811270 | 7.613674e-51 | 4.691972e-48 |
| MsG0580028176.01 | MsG0880042091.01 | 0.818511 | 1.886403e-52 | 1.414915e-49 |
| MsG0580029127.01 | MsG0880042091.01 | 0.819629 | 1.050502e-52 | 8.126805e-50 |
| MsG0580029640.01 | MsG0880042091.01 | 0.808388 | 3.174311e-50 | 1.812695e-47 |
| MsG0580029729.01 | MsG0880042091.01 | 0.822071 | 2.882209e-53 | 2.387067e-50 |
| MsG0280006712.01 | MsG0880042091.01 | 0.800841 | 1.192869e-48 | 5.611477e-46 |
| MsG0280007452.01 | MsG0880042091.01 | 0.803899 | 2.797398e-49 | 1.422563e-46 |
| MsG0280007955.01 | MsG0880042091.01 | 0.814518 | 1.478818e-51 | 9.944787e-49 |
| MsG0280007960.01 | MsG0880042091.01 | 0.813408 | 2.598241e-51 | 1.695450e-48 |
| MsG0280008614.01 | MsG0880042091.01 | 0.818940 | 1.507647e-52 | 1.144453e-49 |
| MsG0280008764.01 | MsG0880042091.01 | 0.813659 | 2.288149e-51 | 1.503263e-48 |
| MsG0280008909.01 | MsG0880042091.01 | 0.814545 | 1.459101e-51 | 9.818815e-49 |
| MsG0280009514.01 | MsG0880042091.01 | 0.831117 | 2.002299e-55 | 2.152134e-52 |
| MsG0280009794.01 | MsG0880042091.01 | 0.881949 | 1.568311e-70 | 9.372275e-67 |
| MsG0280009983.01 | MsG0880042091.01 | 0.802201 | 6.276586e-49 | 3.055985e-46 |
| MsG0280010015.01 | MsG0880042091.01 | 0.809620 | 1.729318e-50 | 1.020340e-47 |
| MsG0280010489.01 | MsG0880042091.01 | 0.823457 | 1.371254e-53 | 1.181271e-50 |
| MsG0280010491.01 | MsG0880042091.01 | 0.822427 | 2.383361e-53 | 1.994351e-50 |
| MsG0780036477.01 | MsG0880042091.01 | 0.805682 | 1.186272e-49 | 6.315810e-47 |
| MsG0780036752.01 | MsG0880042091.01 | 0.873261 | 1.686401e-67 | 7.272012e-64 |
| MsG0780036757.01 | MsG0880042091.01 | 0.807285 | 5.446872e-50 | 3.021853e-47 |
| MsG0780036815.01 | MsG0880042091.01 | 0.841236 | 5.371541e-58 | 7.842236e-55 |
| MsG0780037054.01 | MsG0880042091.01 | 0.831436 | 1.670858e-55 | 1.813041e-52 |
| MsG0780037460.01 | MsG0880042091.01 | 0.808281 | 3.345607e-50 | 1.905146e-47 |
| MsG0780038401.01 | MsG0880042091.01 | 0.800026 | 1.748315e-48 | 8.055774e-46 |
| MsG0780038424.01 | MsG0880042091.01 | 0.842289 | 2.831754e-58 | 4.273526e-55 |
| MsG0780038603.01 | MsG0880042091.01 | 0.827297 | 1.691298e-54 | 1.626157e-51 |
| MsG0780038691.01 | MsG0880042091.01 | 0.819653 | 1.037438e-52 | 8.031390e-50 |
| MsG0780039243.01 | MsG0880042091.01 | 0.803067 | 4.159775e-49 | 2.070443e-46 |
| MsG0780039257.01 | MsG0880042091.01 | 0.814094 | 1.835295e-51 | 1.219996e-48 |
| MsG0780039425.01 | MsG0880042091.01 | 0.801384 | 9.237790e-49 | 4.405564e-46 |
| MsG0780039443.01 | MsG0880042091.01 | 0.821705 | 3.501984e-53 | 2.870661e-50 |
| MsG0780040057.01 | MsG0880042091.01 | 0.814446 | 1.533971e-51 | 1.029522e-48 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880042091.01.T01 | MTR_8g011470 | 99.315 | 146 | 1 | 0 | 1 | 146 | 1 | 146 | 8.88e-110 | 308 |
| MsG0880042091.01.T01 | MTR_8g011470 | 99.237 | 131 | 1 | 0 | 1 | 131 | 1 | 131 | 1.65e-96 | 274 |
| MsG0880042091.01.T01 | MTR_7g052620 | 56.376 | 149 | 59 | 4 | 4 | 146 | 3 | 151 | 1.75e-56 | 173 |
| MsG0880042091.01.T01 | MTR_7g116610 | 35.404 | 161 | 80 | 7 | 8 | 146 | 3 | 161 | 2.23e-19 | 79.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880042091.01.T01 | AT5G48500 | 51.316 | 152 | 52 | 7 | 1 | 133 | 1 | 149 | 6.39e-41 | 134 |
Find 52 sgRNAs with CRISPR-Local
Find 177 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTTGATAATATAATATTTA+AGG | 0.102558 | 8:-3569623 | MsG0880042091.01.T01:three_prime_UTR |
| AGAGAGTAAATGAATGATAA+AGG | 0.246101 | 8:+3572263 | None:intergenic |
| AGCTATGTTACCGGAAATTA+AGG | 0.264208 | 8:-3569440 | MsG0880042091.01.T01:three_prime_UTR |
| CTATAATATGATAATCTTCT+TGG | 0.285873 | 8:+3569599 | None:intergenic |
| TGATTGTTGTTCCACGTAGA+AGG | 0.326423 | 8:-3571681 | MsG0880042091.01.T01:CDS |
| GTTTGTAAAAGCTATGTTAC+CGG | 0.348816 | 8:-3569449 | MsG0880042091.01.T01:three_prime_UTR |
| TGGAGTGGAGATGATGAAAA+AGG | 0.372040 | 8:+3572306 | None:intergenic |
| CAGCATTTGGTAGCTGGGAT+TGG | 0.398463 | 8:-3571846 | MsG0880042091.01.T01:CDS |
| TTGTACAAGTCTTCATCAAC+AGG | 0.401129 | 8:+3570037 | None:intergenic |
| GATCAAGATCTTTATGTTGC+TGG | 0.401416 | 8:-3571739 | MsG0880042091.01.T01:CDS |
| TGATTATTGTGCTAAGCTCT+TGG | 0.402533 | 8:-3569571 | MsG0880042091.01.T01:three_prime_UTR |
| CTTTGAGGTGTATCATTGAT+TGG | 0.403387 | 8:-3569483 | MsG0880042091.01.T01:three_prime_UTR |
| ATGTACCAGCATTTGGTAGC+TGG | 0.414664 | 8:-3571852 | MsG0880042091.01.T01:CDS |
| TTAGTCTTTGATGTACTTTG+AGG | 0.416023 | 8:-3569498 | MsG0880042091.01.T01:three_prime_UTR |
| GTTGAGTGAGAGAATGTAGA+AGG | 0.420719 | 8:+3572060 | None:intergenic |
| GACATTGGACTAGGACTTGG+TGG | 0.430538 | 8:+3570076 | None:intergenic |
| AGGAACCATGTACCAGCATT+TGG | 0.438003 | 8:-3571859 | MsG0880042091.01.T01:CDS |
| GATTCAAAGCATTGAGTGAA+TGG | 0.443836 | 8:+3571811 | None:intergenic |
| TCATCAACAGGCTTTGGTGT+TGG | 0.446438 | 8:+3570049 | None:intergenic |
| GAGAGTAAATGAATGATAAA+GGG | 0.457565 | 8:+3572264 | None:intergenic |
| CGTGGAACAACAATCATTGC+AGG | 0.459147 | 8:+3571688 | None:intergenic |
| AAGTCTTCATCAACAGGCTT+TGG | 0.463769 | 8:+3570043 | None:intergenic |
| GTGGTTGGAAGCAATATAAA+AGG | 0.472003 | 8:+3572126 | None:intergenic |
| GGTACGTTCCCAACATGAAA+AGG | 0.486529 | 8:-3570140 | MsG0880042091.01.T01:CDS |
| ATAGTAGATAGATACTCTCT+TGG | 0.491827 | 8:-3569656 | MsG0880042091.01.T01:three_prime_UTR |
| TTTGGTGTTGGTCTTGACAT+TGG | 0.498140 | 8:+3570061 | None:intergenic |
| TGTACCAGCATTTGGTAGCT+GGG | 0.509582 | 8:-3571851 | MsG0880042091.01.T01:CDS |
| CTTGACATTGGACTAGGACT+TGG | 0.515351 | 8:+3570073 | None:intergenic |
| TTCAAAGAAACAAAGCCTCT+TGG | 0.516769 | 8:-3572090 | MsG0880042091.01.T01:five_prime_UTR |
| AGCTACCAAATGCTGGTACA+TGG | 0.523568 | 8:+3571854 | None:intergenic |
| GATTGTTGTTCCACGTAGAA+GGG | 0.539249 | 8:-3571680 | MsG0880042091.01.T01:intron |
| TTAATGTGAGGTGGAAAGAA+AGG | 0.539311 | 8:+3572172 | None:intergenic |
| TTGGTGGTTCTTTCACAACA+TGG | 0.545398 | 8:+3570092 | None:intergenic |
| CAATCCCAGCTACCAAATGC+TGG | 0.549172 | 8:+3571847 | None:intergenic |
| ATCTTCTTTATGTCAAAACT+AGG | 0.563542 | 8:-3570003 | MsG0880042091.01.T01:CDS |
| CACTTGTTTCATCAAAACAA+TGG | 0.567991 | 8:-3572038 | MsG0880042091.01.T01:exon |
| GTTGGTCTTGACATTGGACT+AGG | 0.569668 | 8:+3570067 | None:intergenic |
| GTACATGGTTCCTCTTGAAG+TGG | 0.570983 | 8:+3571869 | None:intergenic |
| AGATAACGAAGTAACAGAGT+AGG | 0.578708 | 8:+3572351 | None:intergenic |
| TCTTTATGTCAAAACTAGGA+AGG | 0.584419 | 8:-3569999 | MsG0880042091.01.T01:intron |
| GTTGGAAGCAATATAAAAGG+AGG | 0.598565 | 8:+3572129 | None:intergenic |
| TGCTTTGAATCTGCAAGACA+AGG | 0.600221 | 8:-3571799 | MsG0880042091.01.T01:CDS |
| AATAGGAATACCACTTCAAG+AGG | 0.609300 | 8:-3571879 | MsG0880042091.01.T01:intron |
| GTAGAAGGTTATTGACCAAG+AGG | 0.631756 | 8:+3572075 | None:intergenic |
| TAATGTGAGGTGGAAAGAAA+GGG | 0.631792 | 8:+3572173 | None:intergenic |
| GAGCGTGTGTTAATGTGAGG+TGG | 0.636602 | 8:+3572163 | None:intergenic |
| ATGAGTCAAGAAAATTTGAG+AGG | 0.637897 | 8:-3569720 | MsG0880042091.01.T01:three_prime_UTR |
| AGTAACAGAGTAGGAGACAG+AGG | 0.638884 | 8:+3572360 | None:intergenic |
| TTTGAATCTGCAAGACAAGG+TGG | 0.656042 | 8:-3571796 | MsG0880042091.01.T01:CDS |
| TAGGAGACAGAGGAACAAAG+AGG | 0.663899 | 8:+3572370 | None:intergenic |
| TGTGAGCGTGTGTTAATGTG+AGG | 0.723893 | 8:+3572160 | None:intergenic |
| AGGTGACATACCCTTCTACG+TGG | 0.761356 | 8:+3571670 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATAATTAATTTCTCTA+TGG | - | Chr8:3570596-3570615 | MsG0880042091.01.T01:intron | 10.0% |
| !! | AAATAAAAATGATTAAATGA+AGG | - | Chr8:3572107-3572126 | MsG0880042091.01.T01:five_prime_UTR | 10.0% |
| !! | TTATTAATTAGAGTTATAAA+GGG | - | Chr8:3570901-3570920 | MsG0880042091.01.T01:intron | 10.0% |
| !!! | AAATGAAAATTTAATTTTAG+TGG | + | Chr8:3571858-3571877 | None:intergenic | 10.0% |
| !!! | ATCATTTTTATTTACAATAT+TGG | + | Chr8:3572100-3572119 | None:intergenic | 10.0% |
| !!! | CAAAAAAAAAAATTCTTTTT+TGG | - | Chr8:3571303-3571322 | MsG0880042091.01.T01:intron | 10.0% |
| !!! | TAATTATTTTTCATTAACAA+AGG | + | Chr8:3570587-3570606 | None:intergenic | 10.0% |
| !! | AAAAAAAGTGATATTAGAAA+AGG | + | Chr8:3571993-3572012 | None:intergenic | 15.0% |
| !! | ACTTTATCACAATTAAAATT+GGG | + | Chr8:3571366-3571385 | None:intergenic | 15.0% |
| !! | GTTATTAATTAGAGTTATAA+AGG | - | Chr8:3570900-3570919 | MsG0880042091.01.T01:intron | 15.0% |
| !! | TAAGGATACTAAAAAAAATT+GGG | - | Chr8:3571055-3571074 | MsG0880042091.01.T01:intron | 15.0% |
| !! | TACTTTATCACAATTAAAAT+TGG | + | Chr8:3571367-3571386 | None:intergenic | 15.0% |
| !! | TGGATTTAAATCATTAATTA+TGG | - | Chr8:3570387-3570406 | MsG0880042091.01.T01:intron | 15.0% |
| !! | TTAAGGATACTAAAAAAAAT+TGG | - | Chr8:3571054-3571073 | MsG0880042091.01.T01:intron | 15.0% |
| !!! | AATTTTAATTGTGATAAAGT+AGG | - | Chr8:3571366-3571385 | MsG0880042091.01.T01:intron | 15.0% |
| !!! | ATGAAAACTAAATGTTTTAT+GGG | - | Chr8:3569866-3569885 | MsG0880042091.01.T01:intron | 15.0% |
| !!! | ATTAATTATGGATTTTTGTT+TGG | - | Chr8:3570399-3570418 | MsG0880042091.01.T01:intron | 15.0% |
| !!! | TATGAAAACTAAATGTTTTA+TGG | - | Chr8:3569865-3569884 | MsG0880042091.01.T01:intron | 15.0% |
| !!! | TTACTACTTTTTTTTTTTGA+GGG | - | Chr8:3570432-3570451 | MsG0880042091.01.T01:intron | 15.0% |
| !!! | TTTACTACTTTTTTTTTTTG+AGG | - | Chr8:3570431-3570450 | MsG0880042091.01.T01:intron | 15.0% |
| !!! | TTTTAATGAGAAATGTTAAT+CGG | - | Chr8:3571014-3571033 | MsG0880042091.01.T01:intron | 15.0% |
| !! | AAAAAGGAAATAAGGTAAAA+TGG | + | Chr8:3569475-3569494 | None:intergenic | 20.0% |
| !! | AATAAGAAACAAAACTAACA+AGG | + | Chr8:3570162-3570181 | None:intergenic | 20.0% |
| !! | AATTGAATATGCACTAATAT+AGG | + | Chr8:3571914-3571933 | None:intergenic | 20.0% |
| !! | ATAATTAATTTCTCTATGGT+AGG | - | Chr8:3570600-3570619 | MsG0880042091.01.T01:intron | 20.0% |
| !! | ATCATTAATGTCAATACAAT+AGG | + | Chr8:3570650-3570669 | None:intergenic | 20.0% |
| !! | ATGCAAAACAATAAAATACT+AGG | + | Chr8:3570353-3570372 | None:intergenic | 20.0% |
| !! | CTATAATATGATAATCTTCT+TGG | + | Chr8:3572198-3572217 | None:intergenic | 20.0% |
| !! | TAAGTGTATATAACAAACAA+AGG | + | Chr8:3569800-3569819 | None:intergenic | 20.0% |
| !! | TATATAAATAAAAGGGAAAG+TGG | - | Chr8:3570848-3570867 | MsG0880042091.01.T01:intron | 20.0% |
| !! | TATATTTGTTTCATTAACCA+GGG | - | Chr8:3571206-3571225 | MsG0880042091.01.T01:intron | 20.0% |
| !! | TTAATAATGCATCTAACTTT+AGG | - | Chr8:3571406-3571425 | MsG0880042091.01.T01:intron | 20.0% |
| !! | TTATATTTGTTTCATTAACC+AGG | - | Chr8:3571205-3571224 | MsG0880042091.01.T01:intron | 20.0% |
| !! | TTTATAAAAAGTGACATTTG+TGG | + | Chr8:3571592-3571611 | None:intergenic | 20.0% |
| !!! | AGTAGTATTGAAAATTGAAA+TGG | - | Chr8:3570958-3570977 | MsG0880042091.01.T01:intron | 20.0% |
| !!! | TGAAAACTAAATGTTTTATG+GGG | - | Chr8:3569867-3569886 | MsG0880042091.01.T01:intron | 20.0% |
| !!! | TGTTTCTTATTTTCTAAAAG+AGG | - | Chr8:3570171-3570190 | MsG0880042091.01.T01:intron | 20.0% |
| !!! | TTTCTTCTTTTTCTCTTAAA+CGG | - | Chr8:3572252-3572271 | MsG0880042091.01.T01:intron | 20.0% |
| ! | AGAGAGTAAATGAATGATAA+AGG | + | Chr8:3569534-3569553 | None:intergenic | 25.0% |
| ! | AGATGATGAAAAAGGAAATA+AGG | + | Chr8:3569483-3569502 | None:intergenic | 25.0% |
| ! | ATAAAGGGTTGAAAAAGAAA+GGG | + | Chr8:3569518-3569537 | None:intergenic | 25.0% |
| ! | ATATTTGTTTCATTAACCAG+GGG | - | Chr8:3571207-3571226 | MsG0880042091.01.T01:intron | 25.0% |
| ! | ATCTTCTTTATGTCAAAACT+AGG | - | Chr8:3571791-3571810 | MsG0880042091.01.T01:CDS | 25.0% |
| ! | ATTAATGTCAATACAATAGG+AGG | + | Chr8:3570647-3570666 | None:intergenic | 25.0% |
| ! | CACATATATTGTCAAAGTTA+GGG | - | Chr8:3570210-3570229 | MsG0880042091.01.T01:intron | 25.0% |
| ! | GAGAGTAAATGAATGATAAA+GGG | + | Chr8:3569533-3569552 | None:intergenic | 25.0% |
| ! | TAAATTGTATTGCATCAAAG+TGG | - | Chr8:3570516-3570535 | MsG0880042091.01.T01:intron | 25.0% |
| ! | TCACATATATTGTCAAAGTT+AGG | - | Chr8:3570209-3570228 | MsG0880042091.01.T01:intron | 25.0% |
| ! | TCACCAAAATTATAGACAAT+GGG | - | Chr8:3571451-3571470 | MsG0880042091.01.T01:intron | 25.0% |
| ! | TGCATTATTAAACAAAGTCA+TGG | + | Chr8:3571397-3571416 | None:intergenic | 25.0% |
| ! | TTATGAAAGCAAAGTAGTAA+AGG | + | Chr8:3571882-3571901 | None:intergenic | 25.0% |
| !! | AAAACTAAATGTTTTATGGG+GGG | - | Chr8:3569869-3569888 | MsG0880042091.01.T01:intron | 25.0% |
| !! | ATCTTGTTATGATATACACA+TGG | + | Chr8:3571479-3571498 | None:intergenic | 25.0% |
| !! | GAAAACTAAATGTTTTATGG+GGG | - | Chr8:3569868-3569887 | MsG0880042091.01.T01:intron | 25.0% |
| !! | GCTTTATTGTCTATGTTAAT+GGG | - | Chr8:3571428-3571447 | MsG0880042091.01.T01:intron | 25.0% |
| !! | TGACTAACAATTTCTTCTTT+TGG | + | Chr8:3571120-3571139 | None:intergenic | 25.0% |
| !!! | CCTTTTTTTTCCTTAATTTC+CGG | + | Chr8:3572367-3572386 | None:intergenic | 25.0% |
| !!! | TAATTTGCTGTTAACATTGT+AGG | - | Chr8:3571627-3571646 | MsG0880042091.01.T01:intron | 25.0% |
| !!! | TTGTTTTGCATGTCTTTAAT+TGG | - | Chr8:3570362-3570381 | MsG0880042091.01.T01:intron | 25.0% |
| AATAAATGTGAAATGAGTCG+AGG | + | Chr8:3570820-3570839 | None:intergenic | 30.0% | |
| AGAGTTATAAAGGGAAAAAG+TGG | - | Chr8:3570910-3570929 | MsG0880042091.01.T01:intron | 30.0% | |
| AGGATGTGAAAAAGCAAAAT+TGG | - | Chr8:3571674-3571693 | MsG0880042091.01.T01:intron | 30.0% | |
| ATAAATGTGAAATGAGTCGA+GGG | + | Chr8:3570819-3570838 | None:intergenic | 30.0% | |
| ATAGTAGATAGATACTCTCT+TGG | - | Chr8:3572138-3572157 | MsG0880042091.01.T01:five_prime_UTR | 30.0% | |
| ATGAGTCAAGAAAATTTGAG+AGG | - | Chr8:3572074-3572093 | MsG0880042091.01.T01:five_prime_UTR | 30.0% | |
| CACTTGTTTCATCAAAACAA+TGG | - | Chr8:3569756-3569775 | MsG0880042091.01.T01:CDS | 30.0% | |
| CCGGAAATTAAGGAAAAAAA+AGG | - | Chr8:3572364-3572383 | MsG0880042091.01.T01:five_prime_UTR | 30.0% | |
| GATAAAGGGTTGAAAAAGAA+AGG | + | Chr8:3569519-3569538 | None:intergenic | 30.0% | |
| GGATGTGAAAAAGCAAAATT+GGG | - | Chr8:3571675-3571694 | MsG0880042091.01.T01:intron | 30.0% | |
| GTCACCAAAATTATAGACAA+TGG | - | Chr8:3571450-3571469 | MsG0880042091.01.T01:intron | 30.0% | |
| GTTTGTAAAAGCTATGTTAC+CGG | - | Chr8:3572345-3572364 | MsG0880042091.01.T01:five_prime_UTR | 30.0% | |
| TAAAGGGTTGAAAAAGAAAG+GGG | + | Chr8:3569517-3569536 | None:intergenic | 30.0% | |
| TAACAAGGATAAGAGAGTTA+AGG | + | Chr8:3570147-3570166 | None:intergenic | 30.0% | |
| TATTGCATCAAAGTGGTTAT+AGG | - | Chr8:3570523-3570542 | MsG0880042091.01.T01:intron | 30.0% | |
| TCTTTATGTCAAAACTAGGA+AGG | - | Chr8:3571795-3571814 | MsG0880042091.01.T01:CDS | 30.0% | |
| TTGCATGTCTTTAATTGGAT+TGG | - | Chr8:3570367-3570386 | MsG0880042091.01.T01:intron | 30.0% | |
| ! | GATCCCATTGTCTATAATTT+TGG | + | Chr8:3571457-3571476 | None:intergenic | 30.0% |
| ! | TCTTTCTTTTTCTACTCTCA+CGG | + | Chr8:3570557-3570576 | None:intergenic | 30.0% |
| ! | TTAGTCTTTGATGTACTTTG+AGG | - | Chr8:3572296-3572315 | MsG0880042091.01.T01:five_prime_UTR | 30.0% |
| ! | TTGAAATGGCTCAGTTATTT+TGG | - | Chr8:3570972-3570991 | MsG0880042091.01.T01:intron | 30.0% |
| ! | TTTCACATCCTTTTCATGTT+GGG | + | Chr8:3571665-3571684 | None:intergenic | 30.0% |
| ! | TTTTCACATCCTTTTCATGT+TGG | + | Chr8:3571666-3571685 | None:intergenic | 30.0% |
| !! | GGCTTTATTGTCTATGTTAA+TGG | - | Chr8:3571427-3571446 | MsG0880042091.01.T01:intron | 30.0% |
| !! | GTTTTGACATAAAGAAGATC+TGG | + | Chr8:3571790-3571809 | None:intergenic | 30.0% |
| !! | TGAAATGGCTCAGTTATTTT+GGG | - | Chr8:3570973-3570992 | MsG0880042091.01.T01:intron | 30.0% |
| !! | TTTTTATTTGGGGGTGTAAT+AGG | - | Chr8:3569898-3569917 | MsG0880042091.01.T01:intron | 30.0% |
| !!! | GTTATTTTGGGACAAGTAAA+TGG | - | Chr8:3570985-3571004 | MsG0880042091.01.T01:intron | 30.0% |
| AAAGGGTTGAAAAAGAAAGG+GGG | + | Chr8:3569516-3569535 | None:intergenic | 35.0% | |
| AATAGGAATACCACTTCAAG+AGG | - | Chr8:3569915-3569934 | MsG0880042091.01.T01:intron | 35.0% | |
| AGATAACGAAGTAACAGAGT+AGG | + | Chr8:3569446-3569465 | None:intergenic | 35.0% | |
| AGCTATGTTACCGGAAATTA+AGG | - | Chr8:3572354-3572373 | MsG0880042091.01.T01:five_prime_UTR | 35.0% | |
| AGTGGAGAAAAAGCAAAAGA+GGG | + | Chr8:3571840-3571859 | None:intergenic | 35.0% | |
| GAAATGTTAATCGGTATCCT+CGG | - | Chr8:3571023-3571042 | MsG0880042091.01.T01:intron | 35.0% | |
| GATCAAGATCTTTATGTTGC+TGG | - | Chr8:3570055-3570074 | MsG0880042091.01.T01:CDS | 35.0% | |
| GCTGTTAACATTGTAGGAAA+AGG | - | Chr8:3571633-3571652 | MsG0880042091.01.T01:intron | 35.0% | |
| GGGAATCTATCATTCTATGT+TGG | - | Chr8:3570230-3570249 | MsG0880042091.01.T01:intron | 35.0% | |
| GTGGTTGGAAGCAATATAAA+AGG | + | Chr8:3569671-3569690 | None:intergenic | 35.0% | |
| GTTGGAAGCAATATAAAAGG+AGG | + | Chr8:3569668-3569687 | None:intergenic | 35.0% | |
| TAAAATTGGGTCATGCTAAC+CGG | + | Chr8:3571353-3571372 | None:intergenic | 35.0% | |
| TAATGTGAGGTGGAAAGAAA+GGG | + | Chr8:3569624-3569643 | None:intergenic | 35.0% | |
| TACTACTGTCTATCCTCAAT+TGG | - | Chr8:3570461-3570480 | MsG0880042091.01.T01:intron | 35.0% | |
| TAGTGGAGAAAAAGCAAAAG+AGG | + | Chr8:3571841-3571860 | None:intergenic | 35.0% | |
| TATCCTTAATCAATGTTCCG+AGG | + | Chr8:3571043-3571062 | None:intergenic | 35.0% | |
| TGATTATTGTGCTAAGCTCT+TGG | - | Chr8:3572223-3572242 | MsG0880042091.01.T01:five_prime_UTR | 35.0% | |
| TTAATGTGAGGTGGAAAGAA+AGG | + | Chr8:3569625-3569644 | None:intergenic | 35.0% | |
| TTCAAAGAAACAAAGCCTCT+TGG | - | Chr8:3569704-3569723 | MsG0880042091.01.T01:three_prime_UTR | 35.0% | |
| TTGTACAAGTCTTCATCAAC+AGG | + | Chr8:3571760-3571779 | None:intergenic | 35.0% | |
| ! | TATCCTCGGAACATTGATTA+AGG | - | Chr8:3571037-3571056 | MsG0880042091.01.T01:intron | 35.0% |
| ! | TTTTCACACTCTTCCAATTG+AGG | + | Chr8:3570477-3570496 | None:intergenic | 35.0% |
| !! | CTTTGAGGTGTATCATTGAT+TGG | - | Chr8:3572311-3572330 | MsG0880042091.01.T01:five_prime_UTR | 35.0% |
| !! | GATTCAAAGCATTGAGTGAA+TGG | + | Chr8:3569986-3570005 | None:intergenic | 35.0% |
| !!! | TTCTTTGAAGTGTGCTTTTC+AGG | + | Chr8:3569693-3569712 | None:intergenic | 35.0% |
| AAGTCTTCATCAACAGGCTT+TGG | + | Chr8:3571754-3571773 | None:intergenic | 40.0% | |
| AGTCGAGGGCTCAATTAATT+CGG | + | Chr8:3570805-3570824 | None:intergenic | 40.0% | |
| GTAGAAGGTTATTGACCAAG+AGG | + | Chr8:3569722-3569741 | None:intergenic | 40.0% | |
| GTTGAAAAAGAAAGGGGGTA+TGG | + | Chr8:3569511-3569530 | None:intergenic | 40.0% | |
| GTTGAGTGAGAGAATGTAGA+AGG | + | Chr8:3569737-3569756 | None:intergenic | 40.0% | |
| TGGAGTGGAGATGATGAAAA+AGG | + | Chr8:3569491-3569510 | None:intergenic | 40.0% | |
| TTTGAATCTGCAAGACAAGG+TGG | - | Chr8:3569998-3570017 | MsG0880042091.01.T01:intron | 40.0% | |
| ! | AAAAAGCAAAAGAGGGTGTG+TGG | + | Chr8:3571833-3571852 | None:intergenic | 40.0% |
| ! | AAAAGCAAAAGAGGGTGTGT+GGG | + | Chr8:3571832-3571851 | None:intergenic | 40.0% |
| ! | GATTGTTGTTCCACGTAGAA+GGG | - | Chr8:3570114-3570133 | MsG0880042091.01.T01:CDS | 40.0% |
| ! | TAAATGTTTTATGGGGGGTG+TGG | - | Chr8:3569874-3569893 | MsG0880042091.01.T01:intron | 40.0% |
| ! | TGATTGTTGTTCCACGTAGA+AGG | - | Chr8:3570113-3570132 | MsG0880042091.01.T01:CDS | 40.0% |
| ! | TGCTTTGAATCTGCAAGACA+AGG | - | Chr8:3569995-3570014 | MsG0880042091.01.T01:intron | 40.0% |
| ! | TTAACAAGTGTCTGAGACAC+CGG | - | Chr8:3571331-3571350 | MsG0880042091.01.T01:intron | 40.0% |
| ! | TTGGTGGTTCTTTCACAACA+TGG | + | Chr8:3571705-3571724 | None:intergenic | 40.0% |
| ! | TTTTGCCAATGCAGAAGAGA+GGG | - | Chr8:3572010-3572029 | MsG0880042091.01.T01:intron | 40.0% |
| ! | TTTTTGCCAATGCAGAAGAG+AGG | - | Chr8:3572009-3572028 | MsG0880042091.01.T01:intron | 40.0% |
| !! | TTTGAAGTGTGCTTTTCAGG+TGG | + | Chr8:3569690-3569709 | None:intergenic | 40.0% |
| !! | TTTGGTGTTGGTCTTGACAT+TGG | + | Chr8:3571736-3571755 | None:intergenic | 40.0% |
| !!! | GGGGGTGTGGTTTTTTATTT+GGG | - | Chr8:3569887-3569906 | MsG0880042091.01.T01:intron | 40.0% |
| !!! | GGGGTGTGGTTTTTTATTTG+GGG | - | Chr8:3569888-3569907 | MsG0880042091.01.T01:intron | 40.0% |
| !!! | GGGTGTGGTTTTTTATTTGG+GGG | - | Chr8:3569889-3569908 | MsG0880042091.01.T01:intron | 40.0% |
| AAAATGTTAACCAGTGCCCC+TGG | + | Chr8:3571226-3571245 | None:intergenic | 45.0% | |
| AGCTACCAAATGCTGGTACA+TGG | + | Chr8:3569943-3569962 | None:intergenic | 45.0% | |
| AGGAACCATGTACCAGCATT+TGG | - | Chr8:3569935-3569954 | MsG0880042091.01.T01:intron | 45.0% | |
| AGGGCTCAATTAATTCGGGA+CGG | + | Chr8:3570800-3570819 | None:intergenic | 45.0% | |
| AGTAACAGAGTAGGAGACAG+AGG | + | Chr8:3569437-3569456 | None:intergenic | 45.0% | |
| CGTGGAACAACAATCATTGC+AGG | + | Chr8:3570109-3570128 | None:intergenic | 45.0% | |
| CTCAATTAATTCGGGACGGA+GGG | + | Chr8:3570796-3570815 | None:intergenic | 45.0% | |
| GGTACGTTCCCAACATGAAA+AGG | - | Chr8:3571654-3571673 | MsG0880042091.01.T01:intron | 45.0% | |
| GTACATGGTTCCTCTTGAAG+TGG | + | Chr8:3569928-3569947 | None:intergenic | 45.0% | |
| GTCGAGGGCTCAATTAATTC+GGG | + | Chr8:3570804-3570823 | None:intergenic | 45.0% | |
| TAGGAGACAGAGGAACAAAG+AGG | + | Chr8:3569427-3569446 | None:intergenic | 45.0% | |
| TGTGAGCGTGTGTTAATGTG+AGG | + | Chr8:3569637-3569656 | None:intergenic | 45.0% | |
| ! | AAAAGAAAGGGGGTATGGAG+TGG | + | Chr8:3569506-3569525 | None:intergenic | 45.0% |
| ! | AAAGCAAAAGAGGGTGTGTG+GGG | + | Chr8:3571831-3571850 | None:intergenic | 45.0% |
| ! | ATGTACCAGCATTTGGTAGC+TGG | - | Chr8:3569942-3569961 | MsG0880042091.01.T01:intron | 45.0% |
| ! | CTTGACATTGGACTAGGACT+TGG | + | Chr8:3571724-3571743 | None:intergenic | 45.0% |
| ! | GGTGTCTCAGACACTTGTTA+AGG | + | Chr8:3571332-3571351 | None:intergenic | 45.0% |
| ! | TCATCAACAGGCTTTGGTGT+TGG | + | Chr8:3571748-3571767 | None:intergenic | 45.0% |
| ! | TGTACCAGCATTTGGTAGCT+GGG | - | Chr8:3569943-3569962 | MsG0880042091.01.T01:intron | 45.0% |
| !! | GTTGGTCTTGACATTGGACT+AGG | + | Chr8:3571730-3571749 | None:intergenic | 45.0% |
| !!! | AAGTGTGCTTTTCAGGTGGT+TGG | + | Chr8:3569686-3569705 | None:intergenic | 45.0% |
| !!! | GGGGGGTGTGGTTTTTTATT+TGG | - | Chr8:3569886-3569905 | MsG0880042091.01.T01:intron | 45.0% |
| !! | AAGAAAAATATATAAATAAA+AGG | - | Chr8:3570840-3570859 | MsG0880042091.01.T01:intron | 5.0% |
| !! | AGAAAAATATATAAATAAAA+GGG | - | Chr8:3570841-3570860 | MsG0880042091.01.T01:intron | 5.0% |
| !!! | ATTTGATAATATAATATTTA+AGG | - | Chr8:3572171-3572190 | MsG0880042091.01.T01:five_prime_UTR | 5.0% |
| !!! | ATTTTATTTTTTTTATTACA+TGG | - | Chr8:3570310-3570329 | MsG0880042091.01.T01:intron | 5.0% |
| !!! | TATAAAATTAATAAAACTTT+TGG | + | Chr8:3571965-3571984 | None:intergenic | 5.0% |
| !!! | TTTTATTTTTTTTATTACAT+GGG | - | Chr8:3570311-3570330 | MsG0880042091.01.T01:intron | 5.0% |
| AGGTGACATACCCTTCTACG+TGG | + | Chr8:3570127-3570146 | None:intergenic | 50.0% | |
| CAATCCCAGCTACCAAATGC+TGG | + | Chr8:3569950-3569969 | None:intergenic | 50.0% | |
| CACAACCCTCTCTTCTGCAT+TGG | + | Chr8:3572018-3572037 | None:intergenic | 50.0% | |
| GAGCGTGTGTTAATGTGAGG+TGG | + | Chr8:3569634-3569653 | None:intergenic | 50.0% | |
| GCTCAATTAATTCGGGACGG+AGG | + | Chr8:3570797-3570816 | None:intergenic | 50.0% | |
| GTCATGTTAACCAGTGCCCT+CGG | - | Chr8:3571077-3571096 | MsG0880042091.01.T01:intron | 50.0% | |
| TCATGTTAACCAGTGCCCTC+GGG | - | Chr8:3571078-3571097 | MsG0880042091.01.T01:intron | 50.0% | |
| TTCCTTAACCAGTGACCCGA+GGG | + | Chr8:3571096-3571115 | None:intergenic | 50.0% | |
| ! | CAGCATTTGGTAGCTGGGAT+TGG | - | Chr8:3569948-3569967 | MsG0880042091.01.T01:intron | 50.0% |
| ! | GACATTGGACTAGGACTTGG+TGG | + | Chr8:3571721-3571740 | None:intergenic | 50.0% |
| ! | GTTTCATTAACCAGGGGCAC+TGG | - | Chr8:3571213-3571232 | MsG0880042091.01.T01:intron | 50.0% |
| CTTCCTTAACCAGTGACCCG+AGG | + | Chr8:3571097-3571116 | None:intergenic | 55.0% | |
| ! | TGCCCTCGGGTCACTGGTTA+AGG | - | Chr8:3571091-3571110 | MsG0880042091.01.T01:intron | 60.0% |
| AACCAGTGCCCTCGGGTCAC+TGG | - | Chr8:3571085-3571104 | MsG0880042091.01.T01:intron | 65.0% | |
| ! | AACCAGTGACCCGAGGGCAC+TGG | + | Chr8:3571090-3571109 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 3569423 | 3572393 | 3569423 | ID=MsG0880042091.01;Name=MsG0880042091.01 |
| Chr8 | mRNA | 3569423 | 3572393 | 3569423 | ID=MsG0880042091.01.T01;Parent=MsG0880042091.01;Name=MsG0880042091.01.T01;_AED=0.46;_eAED=0.46;_QI=324|1|1|1|0.25|0.2|5|322|146 |
| Chr8 | exon | 3569423 | 3569792 | 3569423 | ID=MsG0880042091.01.T01:exon:2285;Parent=MsG0880042091.01.T01 |
| Chr8 | exon | 3570000 | 3570167 | 3570000 | ID=MsG0880042091.01.T01:exon:2284;Parent=MsG0880042091.01.T01 |
| Chr8 | exon | 3571681 | 3571896 | 3571681 | ID=MsG0880042091.01.T01:exon:2283;Parent=MsG0880042091.01.T01 |
| Chr8 | exon | 3572033 | 3572247 | 3572033 | ID=MsG0880042091.01.T01:exon:2282;Parent=MsG0880042091.01.T01 |
| Chr8 | exon | 3572276 | 3572393 | 3572276 | ID=MsG0880042091.01.T01:exon:2281;Parent=MsG0880042091.01.T01 |
| Chr8 | five_prime_UTR | 3572276 | 3572393 | 3572276 | ID=MsG0880042091.01.T01:five_prime_utr;Parent=MsG0880042091.01.T01 |
| Chr8 | five_prime_UTR | 3572042 | 3572247 | 3572042 | ID=MsG0880042091.01.T01:five_prime_utr;Parent=MsG0880042091.01.T01 |
| Chr8 | CDS | 3572033 | 3572041 | 3572033 | ID=MsG0880042091.01.T01:cds;Parent=MsG0880042091.01.T01 |
| Chr8 | CDS | 3571681 | 3571896 | 3571681 | ID=MsG0880042091.01.T01:cds;Parent=MsG0880042091.01.T01 |
| Chr8 | CDS | 3570000 | 3570167 | 3570000 | ID=MsG0880042091.01.T01:cds;Parent=MsG0880042091.01.T01 |
| Chr8 | CDS | 3569745 | 3569792 | 3569745 | ID=MsG0880042091.01.T01:cds;Parent=MsG0880042091.01.T01 |
| Chr8 | three_prime_UTR | 3569423 | 3569744 | 3569423 | ID=MsG0880042091.01.T01:three_prime_utr;Parent=MsG0880042091.01.T01 |
| Gene Sequence |
| Protein sequence |
