Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280011305.01.T01 | XP_003597750.1 | 98.98 | 196 | 2 | 0 | 1 | 196 | 114 | 309 | 1.53E-138 | 399 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280011305.01.T01 | G7II20 | 98.980 | 196 | 2 | 0 | 1 | 196 | 114 | 309 | 7.31e-139 | 399 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048856.01 | MsG0280011305.01 | 0.816851 | 4.467634e-52 | 3.201769e-49 |
| MsG0080048874.01 | MsG0280011305.01 | 0.802711 | 4.927317e-49 | 2.430550e-46 |
| MsG0180000091.01 | MsG0280011305.01 | 0.801410 | 9.124906e-49 | 4.354538e-46 |
| MsG0180000241.01 | MsG0280011305.01 | 0.835137 | 1.999118e-56 | 2.422455e-53 |
| MsG0180000470.01 | MsG0280011305.01 | 0.830719 | 2.506903e-55 | 2.663213e-52 |
| MsG0180000702.01 | MsG0280011305.01 | 0.805092 | 1.577441e-49 | 8.271579e-47 |
| MsG0180001063.01 | MsG0280011305.01 | 0.807895 | 4.042173e-50 | 2.278273e-47 |
| MsG0180001892.01 | MsG0280011305.01 | 0.819298 | 1.249747e-52 | 9.579185e-50 |
| MsG0180002377.01 | MsG0280011305.01 | 0.807858 | 4.116339e-50 | 2.317837e-47 |
| MsG0180002842.01 | MsG0280011305.01 | 0.808811 | 2.578416e-50 | 1.488665e-47 |
| MsG0180003455.01 | MsG0280011305.01 | 0.830567 | 2.731069e-55 | 2.888172e-52 |
| MsG0180003797.01 | MsG0280011305.01 | 0.826206 | 3.080272e-54 | 2.869770e-51 |
| MsG0180004389.01 | MsG0280011305.01 | 0.832074 | 1.163364e-55 | 1.286399e-52 |
| MsG0180004765.01 | MsG0280011305.01 | 0.800487 | 1.408348e-48 | 6.565851e-46 |
| MsG0180006224.01 | MsG0280011305.01 | 0.817527 | 3.148223e-52 | 2.298246e-49 |
| MsG0180006257.01 | MsG0280011305.01 | 0.804962 | 1.679381e-49 | 8.777161e-47 |
| MsG0280006299.01 | MsG0280011305.01 | 0.821214 | 4.548240e-53 | 3.677485e-50 |
| MsG0280010698.01 | MsG0280011305.01 | 0.807697 | 4.452922e-50 | 2.496904e-47 |
| MsG0280010736.01 | MsG0280011305.01 | 0.831119 | 1.999208e-55 | 2.148968e-52 |
| MsG0280011305.01 | MsG0380011609.01 | 0.815919 | 7.224215e-52 | 5.046517e-49 |
| MsG0280011305.01 | MsG0380012067.01 | 0.812624 | 3.860792e-51 | 2.466812e-48 |
| MsG0280011305.01 | MsG0380012460.01 | 0.815695 | 8.103946e-52 | 5.626813e-49 |
| MsG0280011305.01 | MsG0380013475.01 | 0.817149 | 3.830412e-52 | 2.767504e-49 |
| MsG0280011305.01 | MsG0380013549.01 | 0.812506 | 4.097045e-51 | 2.609737e-48 |
| MsG0280011305.01 | MsG0380014097.01 | 0.825896 | 3.649445e-54 | 3.370353e-51 |
| MsG0280011305.01 | MsG0380014495.01 | 0.817507 | 3.181496e-52 | 2.321386e-49 |
| MsG0280011305.01 | MsG0380014537.01 | 0.851869 | 6.698914e-61 | 1.374501e-57 |
| MsG0280011305.01 | MsG0380014948.01 | 0.813231 | 2.841595e-51 | 1.845137e-48 |
| MsG0280011305.01 | MsG0380014949.01 | 0.814092 | 1.837492e-51 | 1.221379e-48 |
| MsG0280011305.01 | MsG0380015034.01 | 0.817330 | 3.487059e-52 | 2.531955e-49 |
| MsG0280011305.01 | MsG0380015038.01 | 0.817007 | 4.123064e-52 | 2.967496e-49 |
| MsG0280011305.01 | MsG0380015039.01 | 0.815599 | 8.513891e-52 | 5.896058e-49 |
| MsG0280011305.01 | MsG0380015049.01 | 0.800012 | 1.759479e-48 | 8.104352e-46 |
| MsG0280011305.01 | MsG0380015196.01 | 0.850020 | 2.223979e-60 | 4.297236e-57 |
| MsG0280011305.01 | MsG0380015332.01 | 0.826553 | 2.547353e-54 | 2.396622e-51 |
| MsG0280011305.01 | MsG0380015555.01 | 0.843200 | 1.621676e-58 | 2.518050e-55 |
| MsG0280011305.01 | MsG0380015631.01 | 0.826988 | 2.004605e-54 | 1.910011e-51 |
| MsG0280011305.01 | MsG0380015677.01 | 0.816301 | 5.935490e-52 | 4.190236e-49 |
| MsG0280011305.01 | MsG0380015944.01 | 0.832723 | 8.034545e-56 | 9.057255e-53 |
| MsG0280011305.01 | MsG0380016247.01 | 0.820364 | 7.133710e-53 | 5.632863e-50 |
| MsG0280011305.01 | MsG0380016285.01 | 0.806144 | 9.485115e-50 | 5.109895e-47 |
| MsG0280011305.01 | MsG0380018075.01 | 0.803486 | 3.407563e-49 | 1.714496e-46 |
| MsG0280011305.01 | MsG0480018183.01 | 0.815301 | 9.917359e-52 | 6.811695e-49 |
| MsG0280011305.01 | MsG0480018313.01 | 0.808112 | 3.633895e-50 | 2.060039e-47 |
| MsG0280011305.01 | MsG0480018465.01 | 0.819490 | 1.130356e-52 | 8.711077e-50 |
| MsG0280011305.01 | MsG0480018513.01 | 0.809432 | 1.897620e-50 | 1.113989e-47 |
| MsG0280011305.01 | MsG0480018653.01 | 0.818610 | 1.791547e-52 | 1.347358e-49 |
| MsG0280011305.01 | MsG0480019297.01 | 0.814024 | 1.901995e-51 | 1.261967e-48 |
| MsG0280011305.01 | MsG0480019795.01 | 0.800700 | 1.274571e-48 | 5.974060e-46 |
| MsG0280011305.01 | MsG0480020465.01 | 0.828831 | 7.224985e-55 | 7.263282e-52 |
| MsG0280011305.01 | MsG0480020471.01 | 0.807026 | 6.179744e-50 | 3.405336e-47 |
| MsG0280011305.01 | MsG0480020739.01 | 0.822796 | 1.955635e-53 | 1.653592e-50 |
| MsG0280011305.01 | MsG0480020765.01 | 0.807530 | 4.832876e-50 | 2.698290e-47 |
| MsG0280011305.01 | MsG0480020836.01 | 0.813410 | 2.595845e-51 | 1.693968e-48 |
| MsG0280011305.01 | MsG0480021056.01 | 0.812190 | 4.802568e-51 | 3.033306e-48 |
| MsG0280011305.01 | MsG0480021869.01 | 0.814894 | 1.221107e-51 | 8.294486e-49 |
| MsG0280011305.01 | MsG0480022068.01 | 0.829350 | 5.408253e-55 | 5.521642e-52 |
| MsG0280011305.01 | MsG0480022361.01 | 0.812991 | 3.208739e-51 | 2.070136e-48 |
| MsG0280011305.01 | MsG0480022686.01 | -0.815311 | 9.867194e-52 | 6.779171e-49 |
| MsG0280011305.01 | MsG0480022788.01 | 0.816653 | 4.949457e-52 | 3.527885e-49 |
| MsG0280011305.01 | MsG0480022855.01 | 0.817775 | 2.767663e-52 | 2.034325e-49 |
| MsG0280011305.01 | MsG0480023165.01 | 0.810821 | 9.527922e-51 | 5.802366e-48 |
| MsG0280011305.01 | MsG0480023251.01 | 0.828987 | 6.621757e-55 | 6.687195e-52 |
| MsG0280011305.01 | MsG0480023463.01 | 0.813896 | 2.028992e-51 | 1.341608e-48 |
| MsG0280011305.01 | MsG0480023488.01 | 0.864234 | 1.407644e-64 | 4.388475e-61 |
| MsG0280011305.01 | MsG0480023489.01 | 0.847933 | 8.451512e-60 | 1.526056e-56 |
| MsG0280011305.01 | MsG0580024552.01 | 0.802379 | 5.770390e-49 | 2.822501e-46 |
| MsG0280011305.01 | MsG0580024690.01 | 0.812679 | 3.755493e-51 | 2.402976e-48 |
| MsG0280011305.01 | MsG0580025260.01 | 0.812682 | 3.748997e-51 | 2.399068e-48 |
| MsG0280011305.01 | MsG0580025332.01 | 0.806172 | 9.357104e-50 | 5.044669e-47 |
| MsG0280011305.01 | MsG0580025723.01 | 0.831494 | 1.617163e-55 | 1.757826e-52 |
| MsG0280011305.01 | MsG0580025816.01 | 0.803539 | 3.322363e-49 | 1.673987e-46 |
| MsG0280011305.01 | MsG0580025899.01 | 0.802925 | 4.450797e-49 | 2.207444e-46 |
| MsG0280011305.01 | MsG0580025987.01 | 0.835543 | 1.578893e-56 | 1.936678e-53 |
| MsG0280011305.01 | MsG0580026075.01 | 0.805416 | 1.349241e-49 | 7.134091e-47 |
| MsG0280011305.01 | MsG0580027091.01 | 0.820310 | 7.337933e-53 | 5.785525e-50 |
| MsG0280011305.01 | MsG0580028176.01 | 0.801581 | 8.418108e-49 | 4.034568e-46 |
| MsG0280011305.01 | MsG0580028517.01 | 0.812411 | 4.296537e-51 | 2.730008e-48 |
| MsG0280011305.01 | MsG0580028592.01 | 0.820292 | 7.409024e-53 | 5.838604e-50 |
| MsG0280011305.01 | MsG0580029236.01 | 0.834209 | 3.420908e-56 | 4.031593e-53 |
| MsG0280011305.01 | MsG0680030447.01 | 0.818078 | 2.365148e-52 | 1.752791e-49 |
| MsG0280011305.01 | MsG0680030674.01 | 0.818023 | 2.432758e-52 | 1.800280e-49 |
| MsG0280011305.01 | MsG0680030677.01 | 0.827160 | 1.823275e-54 | 1.745999e-51 |
| MsG0280011305.01 | MsG0680030880.01 | 0.829056 | 6.372292e-55 | 6.448484e-52 |
| MsG0280011305.01 | MsG0680030882.01 | 0.802852 | 4.607984e-49 | 2.281218e-46 |
| MsG0280011305.01 | MsG0680031108.01 | 0.853885 | 1.777049e-61 | 3.897317e-58 |
| MsG0280011305.01 | MsG0680031360.01 | 0.804671 | 1.931632e-49 | 1.001949e-46 |
| MsG0280011305.01 | MsG0680031431.01 | 0.839178 | 1.850656e-57 | 2.535303e-54 |
| MsG0280011305.01 | MsG0680031617.01 | 0.831688 | 1.448202e-55 | 1.583341e-52 |
| MsG0280011305.01 | MsG0680033928.01 | 0.807621 | 4.623188e-50 | 2.587271e-47 |
| MsG0280011305.01 | MsG0680034739.01 | 0.811794 | 5.857031e-51 | 3.659823e-48 |
| MsG0280011305.01 | MsG0680034890.01 | 0.812689 | 3.735359e-51 | 2.390835e-48 |
| MsG0280011305.01 | MsG0680035498.01 | 0.813524 | 2.449971e-51 | 1.603747e-48 |
| MsG0280011305.01 | MsG0680035580.01 | 0.824270 | 8.841052e-54 | 7.793000e-51 |
| MsG0280011305.01 | MsG0680035692.01 | 0.803192 | 3.920554e-49 | 1.957761e-46 |
| MsG0280011305.01 | MsG0680035773.01 | 0.800295 | 1.540813e-48 | 7.148768e-46 |
| MsG0280011305.01 | MsG0780036080.01 | 0.804114 | 2.522986e-49 | 1.290110e-46 |
| MsG0280011305.01 | MsG0780036201.01 | 0.841399 | 4.865199e-58 | 7.140582e-55 |
| MsG0280011305.01 | MsG0780036602.01 | 0.827524 | 1.492130e-54 | 1.444037e-51 |
| MsG0280011305.01 | MsG0780037054.01 | 0.848068 | 7.756926e-60 | 1.406349e-56 |
| MsG0280011305.01 | MsG0780037141.01 | 0.814469 | 1.516694e-51 | 1.018591e-48 |
| MsG0280011305.01 | MsG0780037144.01 | 0.804098 | 2.542929e-49 | 1.299746e-46 |
| MsG0280011305.01 | MsG0780037146.01 | 0.817220 | 3.691891e-52 | 2.672589e-49 |
| MsG0280011305.01 | MsG0780037592.01 | 0.821593 | 3.718858e-53 | 3.038501e-50 |
| MsG0280011305.01 | MsG0780038377.01 | 0.802503 | 5.438508e-49 | 2.668483e-46 |
| MsG0280011305.01 | MsG0780038378.01 | 0.807664 | 4.526755e-50 | 2.536087e-47 |
| MsG0280011305.01 | MsG0780038391.01 | 0.804322 | 2.283848e-49 | 1.174040e-46 |
| MsG0280011305.01 | MsG0780038439.01 | 0.817472 | 3.239714e-52 | 2.361709e-49 |
| MsG0280011305.01 | MsG0780038691.01 | 0.853091 | 3.005522e-61 | 6.418066e-58 |
| MsG0280011305.01 | MsG0780038907.01 | 0.809432 | 1.897802e-50 | 1.114093e-47 |
| MsG0280011305.01 | MsG0780039059.01 | 0.800078 | 1.706215e-48 | 7.872328e-46 |
| MsG0280011305.01 | MsG0780039063.01 | 0.803005 | 4.285869e-49 | 2.129798e-46 |
| MsG0280011305.01 | MsG0780039170.01 | 0.814860 | 1.242492e-51 | 8.432197e-49 |
| MsG0280011305.01 | MsG0780039243.01 | 0.819773 | 9.739235e-53 | 7.565465e-50 |
| MsG0280011305.01 | MsG0780039252.01 | 0.804432 | 2.166885e-49 | 1.117032e-46 |
| MsG0280011305.01 | MsG0780039257.01 | 0.836164 | 1.098495e-56 | 1.373093e-53 |
| MsG0280011305.01 | MsG0780039443.01 | 0.832875 | 7.365136e-56 | 8.339922e-53 |
| MsG0280011305.01 | MsG0780039808.01 | 0.826495 | 2.629674e-54 | 2.470008e-51 |
| MsG0280011305.01 | MsG0780040074.01 | 0.803623 | 3.191352e-49 | 1.611365e-46 |
| MsG0280011305.01 | MsG0780040669.01 | 0.814821 | 1.267502e-51 | 8.592996e-49 |
| MsG0280011305.01 | MsG0780041229.01 | 0.814734 | 1.324968e-51 | 8.961661e-49 |
| MsG0280011305.01 | MsG0780041764.01 | 0.827559 | 1.463344e-54 | 1.417609e-51 |
| MsG0280011305.01 | MsG0880041861.01 | 0.800401 | 1.466140e-48 | 6.820491e-46 |
| MsG0280011305.01 | MsG0880041863.01 | 0.814362 | 1.601671e-51 | 1.072470e-48 |
| MsG0280011305.01 | MsG0880041986.01 | 0.859305 | 4.534164e-63 | 1.192008e-59 |
| MsG0280011305.01 | MsG0880042091.01 | 0.841820 | 3.769122e-58 | 5.604299e-55 |
| MsG0280011305.01 | MsG0880042412.01 | 0.821947 | 3.079242e-53 | 2.541403e-50 |
| MsG0280011305.01 | MsG0880042520.01 | 0.842121 | 3.137813e-58 | 4.710465e-55 |
| MsG0280011305.01 | MsG0880042698.01 | 0.839213 | 1.812790e-57 | 2.486250e-54 |
| MsG0280011305.01 | MsG0880043157.01 | 0.800788 | 1.222850e-48 | 5.744429e-46 |
| MsG0280011305.01 | MsG0880043479.01 | 0.812264 | 4.626548e-51 | 2.928011e-48 |
| MsG0280011305.01 | MsG0880043480.01 | 0.816728 | 4.762090e-52 | 3.401120e-49 |
| MsG0280011305.01 | MsG0880043937.01 | 0.820038 | 8.471407e-53 | 6.629533e-50 |
| MsG0280011305.01 | MsG0880043941.01 | 0.838380 | 2.976051e-57 | 3.979069e-54 |
| MsG0280011305.01 | MsG0880043942.01 | 0.806170 | 9.367171e-50 | 5.049844e-47 |
| MsG0280011305.01 | MsG0880044131.01 | 0.803074 | 4.147205e-49 | 2.064530e-46 |
| MsG0280011305.01 | MsG0880044210.01 | 0.826771 | 2.259229e-54 | 2.138876e-51 |
| MsG0280011305.01 | MsG0880044782.01 | 0.808751 | 2.655772e-50 | 1.530928e-47 |
| MsG0280011305.01 | MsG0880044997.01 | 0.800749 | 1.245572e-48 | 5.845500e-46 |
| MsG0280011305.01 | MsG0880045443.01 | 0.822510 | 2.279562e-53 | 1.911965e-50 |
| MsG0280011305.01 | MsG0880045453.01 | 0.808723 | 2.691812e-50 | 1.550527e-47 |
| MsG0280011305.01 | MsG0880045639.01 | 0.811468 | 6.896275e-51 | 4.272265e-48 |
| MsG0280011305.01 | MsG0880045895.01 | 0.824057 | 9.916894e-54 | 8.688876e-51 |
| MsG0280011305.01 | MsG0880046012.01 | 0.815078 | 1.111739e-51 | 7.589333e-49 |
| MsG0280011305.01 | MsG0880046020.01 | 0.805390 | 1.366186e-49 | 7.218749e-47 |
| MsG0280011305.01 | MsG0880046027.01 | 0.805631 | 1.216342e-49 | 6.467074e-47 |
| MsG0280006469.01 | MsG0280011305.01 | 0.804400 | 2.199876e-49 | 1.133114e-46 |
| MsG0280006567.01 | MsG0280011305.01 | 0.834237 | 3.366358e-56 | 3.970827e-53 |
| MsG0280006570.01 | MsG0280011305.01 | 0.811852 | 5.689500e-51 | 3.560546e-48 |
| MsG0280006769.01 | MsG0280011305.01 | 0.821223 | 4.527003e-53 | 3.661181e-50 |
| MsG0280006910.01 | MsG0280011305.01 | 0.812614 | 3.880554e-51 | 2.478793e-48 |
| MsG0280007878.01 | MsG0280011305.01 | 0.806254 | 8.994325e-50 | 4.859193e-47 |
| MsG0280007955.01 | MsG0280011305.01 | 0.821976 | 3.031365e-53 | 2.503910e-50 |
| MsG0280007960.01 | MsG0280011305.01 | 0.803567 | 3.278530e-49 | 1.653101e-46 |
| MsG0280008112.01 | MsG0280011305.01 | 0.811453 | 6.948602e-51 | 4.302973e-48 |
| MsG0280008377.01 | MsG0280011305.01 | 0.811140 | 8.126407e-51 | 4.990903e-48 |
| MsG0280008615.01 | MsG0280011305.01 | 0.819400 | 1.184715e-52 | 9.106834e-50 |
| MsG0280008894.01 | MsG0280011305.01 | 0.806995 | 6.275177e-50 | 3.455051e-47 |
| MsG0280009122.01 | MsG0280011305.01 | 0.815830 | 7.561643e-52 | 5.269484e-49 |
| MsG0280009417.01 | MsG0280011305.01 | 0.814284 | 1.666011e-51 | 1.113231e-48 |
| MsG0280009421.01 | MsG0280011305.01 | 0.802822 | 4.675139e-49 | 2.312771e-46 |
| MsG0280009514.01 | MsG0280011305.01 | 0.805906 | 1.064433e-49 | 5.699612e-47 |
| MsG0280009748.01 | MsG0280011305.01 | 0.829847 | 4.092753e-55 | 4.239880e-52 |
| MsG0280009794.01 | MsG0280011305.01 | 0.808272 | 3.359985e-50 | 1.912918e-47 |
| MsG0280010349.01 | MsG0280011305.01 | 0.831514 | 1.599234e-55 | 1.739395e-52 |
| MsG0280010350.01 | MsG0280011305.01 | 0.808808 | 2.582381e-50 | 1.490822e-47 |
| MsG0280010489.01 | MsG0280011305.01 | 0.836368 | 9.751776e-57 | 1.226377e-53 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280011305.01.T01 | MTR_2g101870 | 98.980 | 196 | 2 | 0 | 1 | 196 | 114 | 309 | 1.85e-142 | 399 |
| MsG0280011305.01.T01 | MTR_6g087880 | 52.083 | 192 | 91 | 1 | 4 | 195 | 115 | 305 | 2.06e-72 | 221 |
| MsG0280011305.01.T01 | MTR_6g081930 | 44.103 | 195 | 106 | 2 | 3 | 195 | 100 | 293 | 4.25e-53 | 172 |
| MsG0280011305.01.T01 | MTR_8g106580 | 44.898 | 196 | 105 | 2 | 2 | 195 | 101 | 295 | 5.17e-45 | 151 |
| MsG0280011305.01.T01 | MTR_4g075730 | 40.884 | 181 | 100 | 4 | 21 | 196 | 140 | 318 | 2.72e-40 | 139 |
| MsG0280011305.01.T01 | MTR_8g086610 | 34.270 | 178 | 108 | 5 | 24 | 196 | 106 | 279 | 3.15e-32 | 117 |
| MsG0280011305.01.T01 | MTR_0154s0010 | 40.441 | 136 | 78 | 3 | 63 | 196 | 1 | 135 | 7.46e-30 | 107 |
| MsG0280011305.01.T01 | MTR_4g075730 | 48.193 | 83 | 43 | 0 | 21 | 103 | 140 | 222 | 2.90e-22 | 90.5 |
| MsG0280011305.01.T01 | MTR_3g037650 | 32.558 | 172 | 107 | 4 | 13 | 180 | 90 | 256 | 2.12e-21 | 89.0 |
| MsG0280011305.01.T01 | MTR_3g033530 | 24.000 | 175 | 132 | 1 | 10 | 184 | 162 | 335 | 5.30e-13 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280011305.01.T01 | AT3G24600 | 47.059 | 170 | 88 | 2 | 25 | 193 | 133 | 301 | 7.20e-49 | 161 |
| MsG0280011305.01.T01 | AT3G24605 | 38.919 | 185 | 111 | 2 | 10 | 193 | 113 | 296 | 5.12e-43 | 146 |
| MsG0280011305.01.T01 | AT4G35170 | 41.860 | 172 | 95 | 3 | 6 | 174 | 108 | 277 | 1.09e-40 | 140 |
| MsG0280011305.01.T01 | AT5G42860 | 38.660 | 194 | 98 | 1 | 2 | 174 | 103 | 296 | 4.06e-39 | 136 |
| MsG0280011305.01.T01 | AT1G45688 | 39.175 | 194 | 96 | 1 | 5 | 176 | 127 | 320 | 1.80e-37 | 132 |
| MsG0280011305.01.T01 | AT2G41990 | 34.524 | 168 | 106 | 1 | 13 | 180 | 119 | 282 | 1.21e-26 | 103 |
| MsG0280011305.01.T01 | AT1G45688 | 38.525 | 122 | 70 | 2 | 5 | 122 | 127 | 247 | 8.01e-22 | 89.7 |
| MsG0280011305.01.T01 | AT3G08490 | 23.636 | 165 | 126 | 0 | 14 | 178 | 87 | 251 | 7.21e-12 | 63.2 |
Find 78 sgRNAs with CRISPR-Local
Find 124 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTAGTGCTTTGAAATTAAA+AGG | 0.150017 | 2:-82179292 | None:intergenic |
| GGTAATAAGATTCCCCTTTA+TGG | 0.167603 | 2:+82181234 | MsG0280011305.01.T01:CDS |
| GAATTCTTCTTGAATTTAAT+AGG | 0.271825 | 2:-82181420 | None:intergenic |
| TCTCCTTCACATCCTTCTTT+TGG | 0.272863 | 2:+82179840 | MsG0280011305.01.T01:five_prime_UTR |
| ACAATACGGTGACTCTTTCT+TGG | 0.322732 | 2:-82181195 | None:intergenic |
| ACATAGTATACAGGTCTCTT+TGG | 0.336582 | 2:-82179736 | None:intergenic |
| TCCGGTTTGTGAAACTGTTA+TGG | 0.345177 | 2:-82181268 | None:intergenic |
| CTCCATAGGACTGTTGATAT+TGG | 0.350073 | 2:-82179817 | None:intergenic |
| AATGGAAATAAATGAGATAA+TGG | 0.364937 | 2:-82179396 | None:intergenic |
| GGGTGCTAGCAGGCCTTTCA+AGG | 0.389621 | 2:+82180093 | MsG0280011305.01.T01:CDS |
| AGGTGATGTGGTGGGGAAAC+TGG | 0.391294 | 2:+82181335 | MsG0280011305.01.T01:CDS |
| CCGGTTTGTGAAACTGTTAT+GGG | 0.395573 | 2:-82181267 | None:intergenic |
| TAAGGAAATCACTTGTCCTT+TGG | 0.400348 | 2:+82181374 | MsG0280011305.01.T01:CDS |
| TAACAAGAAACTCAAAGAAA+TGG | 0.408295 | 2:-82179414 | None:intergenic |
| GGTCTCTTTGGAGATCTTGA+TGG | 0.410924 | 2:-82179724 | None:intergenic |
| CCTTTGGTTATCAATTCTGC+TGG | 0.414114 | 2:+82181390 | MsG0280011305.01.T01:CDS |
| CCATCATGTGAATCTCTTGA+AGG | 0.414191 | 2:-82179766 | None:intergenic |
| CAGTACATAATCTATATGTT+TGG | 0.415741 | 2:+82180860 | MsG0280011305.01.T01:CDS |
| TCAGAAACTTCTCTTGCAAA+TGG | 0.415938 | 2:-82181557 | None:intergenic |
| TGATCATTTGGGGTGCTAGC+AGG | 0.416591 | 2:+82180083 | MsG0280011305.01.T01:CDS |
| AGTACATAATCTATATGTTT+GGG | 0.418371 | 2:+82180861 | MsG0280011305.01.T01:CDS |
| GTTTGCACTTTGCAAGGAAA+TGG | 0.429304 | 2:-82179340 | None:intergenic |
| AAGATTCCCCTTTATGGAGC+TGG | 0.446069 | 2:+82181240 | MsG0280011305.01.T01:CDS |
| GGGTGATCCAGCTCCATAAA+GGG | 0.452029 | 2:-82181247 | None:intergenic |
| AAGTGCTACTTCAACACTTC+CGG | 0.453891 | 2:-82181286 | None:intergenic |
| CCGTATTGTATCAGTGAACT+TGG | 0.454362 | 2:+82181209 | MsG0280011305.01.T01:CDS |
| AGGCTTGGAACAAAACATAA+AGG | 0.468103 | 2:-82179247 | None:intergenic |
| CCCATAACAGTTTCACAAAC+CGG | 0.469930 | 2:+82181267 | MsG0280011305.01.T01:CDS |
| CTCCAATATCAACAGTCCTA+TGG | 0.476892 | 2:+82179815 | MsG0280011305.01.T01:five_prime_UTR |
| GGAGATCTTGATGGTGAAGA+TGG | 0.477710 | 2:-82179715 | None:intergenic |
| GGTAAGGACAAGGCATCATA+AGG | 0.484890 | 2:+82181356 | MsG0280011305.01.T01:CDS |
| CTAGTGCTTTGAAATTAAAA+GGG | 0.488026 | 2:-82179291 | None:intergenic |
| GGACTTTGTACATAGTATAC+AGG | 0.503085 | 2:-82179745 | None:intergenic |
| CTCGAGTGACGGCCAAAAGA+AGG | 0.504004 | 2:-82179852 | None:intergenic |
| TGGGTGATCCAGCTCCATAA+AGG | 0.514919 | 2:-82181248 | None:intergenic |
| AGGTTTGTTTGCACTTTGCA+AGG | 0.518892 | 2:-82179346 | None:intergenic |
| CCTTCAAGAGATTCACATGA+TGG | 0.519036 | 2:+82179766 | MsG0280011305.01.T01:five_prime_UTR |
| GAAGGAAAGGTAGTAGAAAG+AGG | 0.523236 | 2:+82179922 | MsG0280011305.01.T01:five_prime_UTR |
| ACAGTAACTTCTGCCTTGAA+AGG | 0.531838 | 2:-82180106 | None:intergenic |
| AGTAGAAAGAGGAATGACAA+AGG | 0.534517 | 2:+82179933 | MsG0280011305.01.T01:five_prime_UTR |
| AAGTAAAGTAAGTGATTGAA+AGG | 0.534784 | 2:-82179267 | None:intergenic |
| TCAGATATCAGTATCGCAAC+CGG | 0.536332 | 2:+82181012 | MsG0280011305.01.T01:CDS |
| AAGTAAGTGATTGAAAGGCT+TGG | 0.546484 | 2:-82179262 | None:intergenic |
| CCAAGTTCACTGATACAATA+CGG | 0.554928 | 2:-82181209 | None:intergenic |
| GTAGAAAGAGGAATGACAAA+GGG | 0.562041 | 2:+82179934 | MsG0280011305.01.T01:five_prime_UTR |
| CAAGGCAGAAGTTACTGTCA+AGG | 0.562919 | 2:+82180111 | MsG0280011305.01.T01:CDS |
| GATCGCGAGGTGATGTGGTG+GGG | 0.563802 | 2:+82181328 | MsG0280011305.01.T01:CDS |
| CGATCGCGAGGTGATGTGGT+GGG | 0.564068 | 2:+82181327 | MsG0280011305.01.T01:CDS |
| TGATCGGTGAAGTGTGGACA+TGG | 0.570257 | 2:-82180978 | None:intergenic |
| AGGTCATCTTCAGGAAGGAA+AGG | 0.572600 | 2:+82179909 | MsG0280011305.01.T01:five_prime_UTR |
| CGAGAAACTCTTCTGCTAGT+CGG | 0.574468 | 2:+82179871 | MsG0280011305.01.T01:five_prime_UTR |
| TAAGAATGATCTTACCTCAC+CGG | 0.575350 | 2:-82181031 | None:intergenic |
| ATGTGGTGGGGAAACTGGTA+AGG | 0.575803 | 2:+82181340 | MsG0280011305.01.T01:CDS |
| TCTGAGTAAACAAGATTGAT+CGG | 0.590368 | 2:-82180994 | None:intergenic |
| CTTTAAGAAACAAACATCAC+TGG | 0.592949 | 2:-82179224 | None:intergenic |
| CAGAAGAGTTTCTCGAGTGA+CGG | 0.597006 | 2:-82179863 | None:intergenic |
| AATCCGATCGCGAGGTGATG+TGG | 0.597666 | 2:+82181323 | MsG0280011305.01.T01:CDS |
| ATTGTATCAGTGAACTTGGA+AGG | 0.600518 | 2:+82181213 | MsG0280011305.01.T01:CDS |
| TGATATTGGAGTAGCTTGCA+TGG | 0.603257 | 2:-82179803 | None:intergenic |
| GGATGTGAAGGAGACTCCAT+AGG | 0.604242 | 2:-82179831 | None:intergenic |
| AGGTTCTTATCGTGAATTCG+AGG | 0.604549 | 2:+82179985 | MsG0280011305.01.T01:five_prime_UTR |
| CGGCCAAAAGAAGGATGTGA+AGG | 0.605614 | 2:-82179843 | None:intergenic |
| ACATAATCTATATGTTTGGG+AGG | 0.606954 | 2:+82180864 | MsG0280011305.01.T01:CDS |
| CAAGATTGATCGGTGAAGTG+TGG | 0.610457 | 2:-82180984 | None:intergenic |
| CCACCACATCACCTCGCGAT+CGG | 0.610908 | 2:-82181326 | None:intergenic |
| CCGATCGCGAGGTGATGTGG+TGG | 0.611667 | 2:+82181326 | MsG0280011305.01.T01:CDS |
| TGGGGAAACTGGTAAGGACA+AGG | 0.623482 | 2:+82181346 | MsG0280011305.01.T01:CDS |
| CCAGCAGAATTGATAACCAA+AGG | 0.632275 | 2:-82181390 | None:intergenic |
| AAGTTTGAAATCCGATCGCG+AGG | 0.634220 | 2:+82181315 | MsG0280011305.01.T01:CDS |
| TCAAGTATAACACCACACTC+AGG | 0.641739 | 2:-82179960 | None:intergenic |
| GAAAGAGGAATGACAAAGGG+TGG | 0.643960 | 2:+82179937 | MsG0280011305.01.T01:five_prime_UTR |
| GACAAAGGGTGGCCTGAGTG+TGG | 0.645761 | 2:+82179948 | MsG0280011305.01.T01:five_prime_UTR |
| GGTGATCCAGCTCCATAAAG+GGG | 0.651471 | 2:-82181246 | None:intergenic |
| CATAATCTATATGTTTGGGA+GGG | 0.659908 | 2:+82180865 | MsG0280011305.01.T01:CDS |
| GTGTGGTGTTATACTTGAAG+AGG | 0.668351 | 2:+82179965 | MsG0280011305.01.T01:five_prime_UTR |
| TATCAGTATCGCAACCGGTG+AGG | 0.671558 | 2:+82181017 | MsG0280011305.01.T01:CDS |
| ATAGATATGATATGATGATG+AGG | 0.673601 | 2:-82179366 | None:intergenic |
| TGGGAGGGTACAGACCACAC+AGG | 0.759316 | 2:+82180880 | MsG0280011305.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATACTATTATAAAATCAGT+TGG | + | Chr2:82180300-82180319 | MsG0280011305.01.T01:intron | 15.0% |
| !! | AACTTAAGCTTAATGTATAA+AGG | - | Chr2:82180368-82180387 | None:intergenic | 20.0% |
| !! | AATGGAAATAAATGAGATAA+TGG | - | Chr2:82179399-82179418 | None:intergenic | 20.0% |
| !! | AGAATAATATAGAAACATAC+AGG | - | Chr2:82180675-82180694 | None:intergenic | 20.0% |
| !! | AGACTTAAGAATAACAAAAT+TGG | - | Chr2:82180140-82180159 | None:intergenic | 20.0% |
| !! | AGTACATAATCTATATGTTT+GGG | + | Chr2:82180861-82180880 | MsG0280011305.01.T01:CDS | 20.0% |
| !! | GAATTCTTCTTGAATTTAAT+AGG | - | Chr2:82181423-82181442 | None:intergenic | 20.0% |
| !! | TTAATTAATAATGCAGAGTT+TGG | + | Chr2:82180837-82180856 | MsG0280011305.01.T01:intron | 20.0% |
| !! | TTGAAAGTTAAAAATACAGT+TGG | + | Chr2:82180569-82180588 | MsG0280011305.01.T01:intron | 20.0% |
| !!! | AACTGTATTTTTAACTTTCA+AGG | - | Chr2:82180570-82180589 | None:intergenic | 20.0% |
| !!! | AATAGTTTAACTTTTCTTTG+TGG | + | Chr2:82180406-82180425 | MsG0280011305.01.T01:intron | 20.0% |
| !!! | AATTCAAGTAACTTTTTTCT+TGG | + | Chr2:82181110-82181129 | MsG0280011305.01.T01:intron | 20.0% |
| !!! | AATTTTGTTTCAATCACTTT+GGG | + | Chr2:82180716-82180735 | MsG0280011305.01.T01:intron | 20.0% |
| !!! | TAATTGTCAGAATTTTTGTT+GGG | - | Chr2:82180909-82180928 | None:intergenic | 20.0% |
| !!! | TTAATTGTCAGAATTTTTGT+TGG | - | Chr2:82180910-82180929 | None:intergenic | 20.0% |
| ! | AAGTAAAGTAAGTGATTGAA+AGG | - | Chr2:82179270-82179289 | None:intergenic | 25.0% |
| ! | ACAATACTACTTAATTTCCA+AGG | - | Chr2:82180802-82180821 | None:intergenic | 25.0% |
| ! | CAAAGTGATTGAAACAAAAT+TGG | - | Chr2:82180717-82180736 | None:intergenic | 25.0% |
| ! | CAGTACATAATCTATATGTT+TGG | + | Chr2:82180860-82180879 | MsG0280011305.01.T01:CDS | 25.0% |
| ! | TAACAAGAAACTCAAAGAAA+TGG | - | Chr2:82179417-82179436 | None:intergenic | 25.0% |
| !! | ATAGATATGATATGATGATG+AGG | - | Chr2:82179369-82179388 | None:intergenic | 25.0% |
| !! | CTTTTGTACCAAAAAAGAAA+TGG | + | Chr2:82180748-82180767 | MsG0280011305.01.T01:intron | 25.0% |
| !!! | CAATTTTGTTTCAATCACTT+TGG | + | Chr2:82180715-82180734 | MsG0280011305.01.T01:intron | 25.0% |
| !!! | CTAGTGCTTTGAAATTAAAA+GGG | - | Chr2:82179294-82179313 | None:intergenic | 25.0% |
| !!! | TGTGTTTTGTTTGATCATTT+GGG | + | Chr2:82180072-82180091 | MsG0280011305.01.T01:CDS | 25.0% |
| !!! | TGTTTTCTAGTACTATTTAC+TGG | + | Chr2:82179523-82179542 | MsG0280011305.01.T01:five_prime_UTR | 25.0% |
| !!! | TTCTTTTTTGGTACAAAAGA+GGG | - | Chr2:82180747-82180766 | None:intergenic | 25.0% |
| !!! | TTGCTATTTATAATGTTCCT+TGG | + | Chr2:82180782-82180801 | MsG0280011305.01.T01:intron | 25.0% |
| !!! | TTTCTTTTTTGGTACAAAAG+AGG | - | Chr2:82180748-82180767 | None:intergenic | 25.0% |
| !!! | TTTGAGTATTTTTGAGATTG+AGG | + | Chr2:82181530-82181549 | MsG0280011305.01.T01:three_prime_UTR | 25.0% |
| AACTAAAATGGATGCATAGT+AGG | - | Chr2:82180516-82180535 | None:intergenic | 30.0% | |
| ACATAATCTATATGTTTGGG+AGG | + | Chr2:82180864-82180883 | MsG0280011305.01.T01:CDS | 30.0% | |
| CATAATCTATATGTTTGGGA+GGG | + | Chr2:82180865-82180884 | MsG0280011305.01.T01:CDS | 30.0% | |
| TCTGAGTAAACAAGATTGAT+CGG | - | Chr2:82180997-82181016 | None:intergenic | 30.0% | |
| ! | CTTTAAGAAACAAACATCAC+TGG | - | Chr2:82179227-82179246 | None:intergenic | 30.0% |
| !! | GCTAGTGCTTTGAAATTAAA+AGG | - | Chr2:82179295-82179314 | None:intergenic | 30.0% |
| !! | TACTATGCATCCATTTTAGT+TGG | + | Chr2:82180515-82180534 | MsG0280011305.01.T01:intron | 30.0% |
| !! | TTATTTCTACAAGCTCTCTT+GGG | + | Chr2:82180258-82180277 | MsG0280011305.01.T01:intron | 30.0% |
| !!! | CTGTGTTTTGTTTGATCATT+TGG | + | Chr2:82180071-82180090 | MsG0280011305.01.T01:CDS | 30.0% |
| !!! | GTGTTTTGTTTGATCATTTG+GGG | + | Chr2:82180073-82180092 | MsG0280011305.01.T01:CDS | 30.0% |
| !!! | TGCTACTACCATTTCTTTTT+TGG | - | Chr2:82180759-82180778 | None:intergenic | 30.0% |
| AAGTAAGTGATTGAAAGGCT+TGG | - | Chr2:82179265-82179284 | None:intergenic | 35.0% | |
| ACATAGTATACAGGTCTCTT+TGG | - | Chr2:82179739-82179758 | None:intergenic | 35.0% | |
| AGGCTTGGAACAAAACATAA+AGG | - | Chr2:82179250-82179269 | None:intergenic | 35.0% | |
| AGTAGAAAGAGGAATGACAA+AGG | + | Chr2:82179933-82179952 | MsG0280011305.01.T01:five_prime_UTR | 35.0% | |
| ATTGTATCAGTGAACTTGGA+AGG | + | Chr2:82181213-82181232 | MsG0280011305.01.T01:CDS | 35.0% | |
| CCAAGTTCACTGATACAATA+CGG | - | Chr2:82181212-82181231 | None:intergenic | 35.0% | |
| GGACTTTGTACATAGTATAC+AGG | - | Chr2:82179748-82179767 | None:intergenic | 35.0% | |
| GGTAATAAGATTCCCCTTTA+TGG | + | Chr2:82181234-82181253 | MsG0280011305.01.T01:CDS | 35.0% | |
| GTAGAAAGAGGAATGACAAA+GGG | + | Chr2:82179934-82179953 | MsG0280011305.01.T01:five_prime_UTR | 35.0% | |
| GTGTTATCAGCCAACTAAAA+TGG | - | Chr2:82180528-82180547 | None:intergenic | 35.0% | |
| TAAGAATGATCTTACCTCAC+CGG | - | Chr2:82181034-82181053 | None:intergenic | 35.0% | |
| TAAGGAAATCACTTGTCCTT+TGG | + | Chr2:82181374-82181393 | MsG0280011305.01.T01:CDS | 35.0% | |
| TCAGAAACTTCTCTTGCAAA+TGG | - | Chr2:82181560-82181579 | None:intergenic | 35.0% | |
| TGATGCCTTCTTCAAAAAGA+TGG | - | Chr2:82180433-82180452 | None:intergenic | 35.0% | |
| !! | CTTATTTCTACAAGCTCTCT+TGG | + | Chr2:82180257-82180276 | MsG0280011305.01.T01:intron | 35.0% |
| !! | GATTGCTGTGTTTACTTTTC+TGG | + | Chr2:82180039-82180058 | MsG0280011305.01.T01:CDS | 35.0% |
| !!! | GAGTATTTTTGAGATTGAGG+AGG | + | Chr2:82181533-82181552 | MsG0280011305.01.T01:three_prime_UTR | 35.0% |
| !!! | TACAACCCTGCTACATTTTT+TGG | + | Chr2:82180952-82180971 | MsG0280011305.01.T01:CDS | 35.0% |
| !!! | TTTTTAGGTCATCTTCAGGA+AGG | + | Chr2:82179904-82179923 | MsG0280011305.01.T01:five_prime_UTR | 35.0% |
| ACAATACGGTGACTCTTTCT+TGG | - | Chr2:82181198-82181217 | None:intergenic | 40.0% | |
| ACAGTAACTTCTGCCTTGAA+AGG | - | Chr2:82180109-82180128 | None:intergenic | 40.0% | |
| AGGTTCTTATCGTGAATTCG+AGG | + | Chr2:82179985-82180004 | MsG0280011305.01.T01:five_prime_UTR | 40.0% | |
| ATAGTAGGTGCAAGTGCAAA+TGG | - | Chr2:82180501-82180520 | None:intergenic | 40.0% | |
| CCATCATGTGAATCTCTTGA+AGG | - | Chr2:82179769-82179788 | None:intergenic | 40.0% | |
| CCCATAACAGTTTCACAAAC+CGG | + | Chr2:82181267-82181286 | MsG0280011305.01.T01:CDS | 40.0% | |
| CCGTATTGTATCAGTGAACT+TGG | + | Chr2:82181209-82181228 | MsG0280011305.01.T01:CDS | 40.0% | |
| CCTTCAAGAGATTCACATGA+TGG | + | Chr2:82179766-82179785 | MsG0280011305.01.T01:five_prime_UTR | 40.0% | |
| CCTTTGGTTATCAATTCTGC+TGG | + | Chr2:82181390-82181409 | MsG0280011305.01.T01:CDS | 40.0% | |
| CTCCAATATCAACAGTCCTA+TGG | + | Chr2:82179815-82179834 | MsG0280011305.01.T01:five_prime_UTR | 40.0% | |
| CTCCATAGGACTGTTGATAT+TGG | - | Chr2:82179820-82179839 | None:intergenic | 40.0% | |
| GAAGGAAAGGTAGTAGAAAG+AGG | + | Chr2:82179922-82179941 | MsG0280011305.01.T01:five_prime_UTR | 40.0% | |
| GGATGCCAAAAAATGTAGCA+GGG | - | Chr2:82180960-82180979 | None:intergenic | 40.0% | |
| GTTTGCACTTTGCAAGGAAA+TGG | - | Chr2:82179343-82179362 | None:intergenic | 40.0% | |
| TCAAGTATAACACCACACTC+AGG | - | Chr2:82179963-82179982 | None:intergenic | 40.0% | |
| TCAGATATCAGTATCGCAAC+CGG | + | Chr2:82181012-82181031 | MsG0280011305.01.T01:CDS | 40.0% | |
| TGGATGCCAAAAAATGTAGC+AGG | - | Chr2:82180961-82180980 | None:intergenic | 40.0% | |
| ! | AGGTTTGTTTGCACTTTGCA+AGG | - | Chr2:82179349-82179368 | None:intergenic | 40.0% |
| ! | CCAGCAGAATTGATAACCAA+AGG | - | Chr2:82181393-82181412 | None:intergenic | 40.0% |
| ! | CCGGTTTGTGAAACTGTTAT+GGG | - | Chr2:82181270-82181289 | None:intergenic | 40.0% |
| ! | TCCGGTTTGTGAAACTGTTA+TGG | - | Chr2:82181271-82181290 | None:intergenic | 40.0% |
| ! | TCTCCTTCACATCCTTCTTT+TGG | + | Chr2:82179840-82179859 | MsG0280011305.01.T01:five_prime_UTR | 40.0% |
| ! | TGATATTGGAGTAGCTTGCA+TGG | - | Chr2:82179806-82179825 | None:intergenic | 40.0% |
| !! | AAGTGCTACTTCAACACTTC+CGG | - | Chr2:82181289-82181308 | None:intergenic | 40.0% |
| !! | GTGGACCATCTTTTTGAAGA+AGG | + | Chr2:82180425-82180444 | MsG0280011305.01.T01:intron | 40.0% |
| !! | GTGTGGTGTTATACTTGAAG+AGG | + | Chr2:82179965-82179984 | MsG0280011305.01.T01:five_prime_UTR | 40.0% |
| !!! | GGGATTTTTAGGTCATCTTC+AGG | + | Chr2:82179900-82179919 | MsG0280011305.01.T01:five_prime_UTR | 40.0% |
| AAGATTCCCCTTTATGGAGC+TGG | + | Chr2:82181240-82181259 | MsG0280011305.01.T01:CDS | 45.0% | |
| AGGTCATCTTCAGGAAGGAA+AGG | + | Chr2:82179909-82179928 | MsG0280011305.01.T01:five_prime_UTR | 45.0% | |
| CAAGATTGATCGGTGAAGTG+TGG | - | Chr2:82180987-82181006 | None:intergenic | 45.0% | |
| CAAGGCAGAAGTTACTGTCA+AGG | + | Chr2:82180111-82180130 | MsG0280011305.01.T01:CDS | 45.0% | |
| CAGAAGAGTTTCTCGAGTGA+CGG | - | Chr2:82179866-82179885 | None:intergenic | 45.0% | |
| CGAGAAACTCTTCTGCTAGT+CGG | + | Chr2:82179871-82179890 | MsG0280011305.01.T01:five_prime_UTR | 45.0% | |
| GAAAGAGGAATGACAAAGGG+TGG | + | Chr2:82179937-82179956 | MsG0280011305.01.T01:five_prime_UTR | 45.0% | |
| GGCTGATAACACTGACAGAA+AGG | + | Chr2:82180536-82180555 | MsG0280011305.01.T01:intron | 45.0% | |
| ! | AAGTTTGAAATCCGATCGCG+AGG | + | Chr2:82181315-82181334 | MsG0280011305.01.T01:CDS | 45.0% |
| ! | GGTAAGGACAAGGCATCATA+AGG | + | Chr2:82181356-82181375 | MsG0280011305.01.T01:CDS | 45.0% |
| ! | GGTCTCTTTGGAGATCTTGA+TGG | - | Chr2:82179727-82179746 | None:intergenic | 45.0% |
| ! | TTTTTGTTGGGACTCCTGTG+TGG | - | Chr2:82180897-82180916 | None:intergenic | 45.0% |
| !! | CTCTTCTGCTAGTCGGTTTT+CGG | + | Chr2:82179878-82179897 | MsG0280011305.01.T01:five_prime_UTR | 45.0% |
| !! | GGAGATCTTGATGGTGAAGA+TGG | - | Chr2:82179718-82179737 | None:intergenic | 45.0% |
| !! | GTCGGTTTTCGGGGATTTTT+AGG | + | Chr2:82179889-82179908 | MsG0280011305.01.T01:five_prime_UTR | 45.0% |
| !! | TCTTCTGCTAGTCGGTTTTC+GGG | + | Chr2:82179879-82179898 | MsG0280011305.01.T01:five_prime_UTR | 45.0% |
| CGGCCAAAAGAAGGATGTGA+AGG | - | Chr2:82179846-82179865 | None:intergenic | 50.0% | |
| GGATGTGAAGGAGACTCCAT+AGG | - | Chr2:82179834-82179853 | None:intergenic | 50.0% | |
| GGGTGATCCAGCTCCATAAA+GGG | - | Chr2:82181250-82181269 | None:intergenic | 50.0% | |
| GGTGATCCAGCTCCATAAAG+GGG | - | Chr2:82181249-82181268 | None:intergenic | 50.0% | |
| TATCAGTATCGCAACCGGTG+AGG | + | Chr2:82181017-82181036 | MsG0280011305.01.T01:CDS | 50.0% | |
| TGATCGGTGAAGTGTGGACA+TGG | - | Chr2:82180981-82181000 | None:intergenic | 50.0% | |
| TGGGGAAACTGGTAAGGACA+AGG | + | Chr2:82181346-82181365 | MsG0280011305.01.T01:CDS | 50.0% | |
| TGGGTGATCCAGCTCCATAA+AGG | - | Chr2:82181251-82181270 | None:intergenic | 50.0% | |
| ! | ATGTGGTGGGGAAACTGGTA+AGG | + | Chr2:82181340-82181359 | MsG0280011305.01.T01:CDS | 50.0% |
| ! | TGATCATTTGGGGTGCTAGC+AGG | + | Chr2:82180083-82180102 | MsG0280011305.01.T01:CDS | 50.0% |
| !! | CTTCTGCTAGTCGGTTTTCG+GGG | + | Chr2:82179880-82179899 | MsG0280011305.01.T01:five_prime_UTR | 50.0% |
| AATCCGATCGCGAGGTGATG+TGG | + | Chr2:82181323-82181342 | MsG0280011305.01.T01:CDS | 55.0% | |
| CTCGAGTGACGGCCAAAAGA+AGG | - | Chr2:82179855-82179874 | None:intergenic | 55.0% | |
| ! | AGGTGATGTGGTGGGGAAAC+TGG | + | Chr2:82181335-82181354 | MsG0280011305.01.T01:CDS | 55.0% |
| CCACCACATCACCTCGCGAT+CGG | - | Chr2:82181329-82181348 | None:intergenic | 60.0% | |
| CGATCGCGAGGTGATGTGGT+GGG | + | Chr2:82181327-82181346 | MsG0280011305.01.T01:CDS | 60.0% | |
| GACAAAGGGTGGCCTGAGTG+TGG | + | Chr2:82179948-82179967 | MsG0280011305.01.T01:five_prime_UTR | 60.0% | |
| GATCGCGAGGTGATGTGGTG+GGG | + | Chr2:82181328-82181347 | MsG0280011305.01.T01:CDS | 60.0% | |
| GGGTGCTAGCAGGCCTTTCA+AGG | + | Chr2:82180093-82180112 | MsG0280011305.01.T01:CDS | 60.0% | |
| ! | TGGGAGGGTACAGACCACAC+AGG | + | Chr2:82180880-82180899 | MsG0280011305.01.T01:CDS | 60.0% |
| CCGATCGCGAGGTGATGTGG+TGG | + | Chr2:82181326-82181345 | MsG0280011305.01.T01:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr2 | gene | 82179222 | 82181694 | 82179222 | ID=MsG0280011305.01;Name=MsG0280011305.01 |
| Chr2 | mRNA | 82179222 | 82181694 | 82179222 | ID=MsG0280011305.01.T01;Parent=MsG0280011305.01;Name=MsG0280011305.01.T01;_AED=0.39;_eAED=0.39;_QI=788|1|1|1|1|1|3|236|196 |
| Chr2 | exon | 82179222 | 82180132 | 82179222 | ID=MsG0280011305.01.T01:exon:12295;Parent=MsG0280011305.01.T01 |
| Chr2 | exon | 82180853 | 82181038 | 82180853 | ID=MsG0280011305.01.T01:exon:12296;Parent=MsG0280011305.01.T01 |
| Chr2 | exon | 82181177 | 82181694 | 82181177 | ID=MsG0280011305.01.T01:exon:12297;Parent=MsG0280011305.01.T01 |
| Chr2 | five_prime_UTR | 82179222 | 82180009 | 82179222 | ID=MsG0280011305.01.T01:five_prime_utr;Parent=MsG0280011305.01.T01 |
| Chr2 | CDS | 82180010 | 82180132 | 82180010 | ID=MsG0280011305.01.T01:cds;Parent=MsG0280011305.01.T01 |
| Chr2 | CDS | 82180853 | 82181038 | 82180853 | ID=MsG0280011305.01.T01:cds;Parent=MsG0280011305.01.T01 |
| Chr2 | CDS | 82181177 | 82181458 | 82181177 | ID=MsG0280011305.01.T01:cds;Parent=MsG0280011305.01.T01 |
| Chr2 | three_prime_UTR | 82181459 | 82181694 | 82181459 | ID=MsG0280011305.01.T01:three_prime_utr;Parent=MsG0280011305.01.T01 |
| Gene Sequence |
| Protein sequence |
