AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280009327.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280009327.01.T01 MTR_2g462000 98.409 440 7 0 14 453 3 442 0.0 910
MsG0280009327.01.T01 MTR_6g015880 69.324 414 123 1 17 430 1 410 0.0 643
MsG0280009327.01.T01 MTR_7g015960 66.200 429 138 2 17 445 1 422 0.0 635
MsG0280009327.01.T01 MTR_2g462010 60.321 436 165 3 19 451 18 448 0.0 586
MsG0280009327.01.T01 MTR_7g015960 68.052 385 116 2 61 445 35 412 0.0 582
MsG0280009327.01.T01 MTR_7g015950 60.185 432 160 4 25 449 17 443 0.0 574
MsG0280009327.01.T01 MTR_6g015875 57.650 451 175 5 1 447 1 439 0.0 560
MsG0280009327.01.T01 MTR_2g104890 50.714 420 196 4 34 446 27 442 6.39e-173 493
MsG0280009327.01.T01 MTR_6g015865 57.766 367 140 4 67 429 3 358 3.00e-161 459
MsG0280009327.01.T01 MTR_3g117690 39.810 422 232 8 33 444 27 436 1.69e-118 354
MsG0280009327.01.T01 MTR_2g034950 28.875 471 274 22 30 453 197 653 3.08e-35 139
MsG0280009327.01.T01 MTR_4g121080 28.571 434 257 19 30 418 193 618 2.04e-34 136
MsG0280009327.01.T01 MTR_5g005590 28.266 421 245 18 43 418 210 618 5.81e-33 132
MsG0280009327.01.T01 MTR_2g083210 27.273 418 253 18 43 419 226 633 1.86e-29 122
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280009327.01.T01 AT5G15630 73.183 399 103 2 33 431 18 412 0.0 647
MsG0280009327.01.T01 AT5G15630 73.158 380 98 2 52 431 1 376 0.0 613
MsG0280009327.01.T01 AT5G15630 73.151 365 94 2 67 431 3 363 0.0 590
MsG0280009327.01.T01 AT5G15630 73.151 365 94 2 67 431 3 363 0.0 590
MsG0280009327.01.T01 AT5G60920 61.072 429 155 4 20 438 15 441 0.0 587
MsG0280009327.01.T01 AT3G02210 58.391 435 170 4 19 450 22 448 0.0 566
MsG0280009327.01.T01 AT5G60920 63.131 396 140 3 47 438 1 394 0.0 562
MsG0280009327.01.T01 AT3G29810 59.569 418 157 4 34 446 27 437 0.0 557
MsG0280009327.01.T01 AT5G15630 70.031 327 94 2 33 359 18 340 0.0 509
MsG0280009327.01.T01 AT1G09790 48.792 414 201 6 17 427 7 412 9.00e-142 413
MsG0280009327.01.T01 AT1G09790 47.765 425 200 7 17 427 7 423 4.27e-139 407
MsG0280009327.01.T01 AT5G60950 49.171 181 84 2 43 223 30 202 9.14e-58 189
MsG0280009327.01.T01 AT4G16120 28.673 422 247 19 43 418 217 630 2.53e-39 150
MsG0280009327.01.T01 AT5G49270 27.729 458 276 20 36 447 210 658 1.42e-38 148
MsG0280009327.01.T01 AT4G27110 27.473 455 276 18 43 451 219 665 4.14e-34 135
MsG0280009327.01.T01 AT3G16860 27.948 458 265 24 43 451 210 651 1.58e-32 130
MsG0280009327.01.T01 AT3G20580 28.289 456 261 21 43 449 229 667 4.26e-32 129

Find 120 sgRNAs with CRISPR-Local

Find 279 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGCCCATATGATTTCTTTCT+TGG 0.151399 2:-50421109 None:intergenic
CCTAGAAGGGTATACTTTAA+TGG 0.184050 2:+50423214 MsG0280009327.01.T01:CDS
TATTTCCAGCAACCTCTTTC+AGG 0.198489 2:-50422392 None:intergenic
TGCAACACATTATAACAATT+TGG 0.224317 2:+50419312 MsG0280009327.01.T01:five_prime_UTR
AAGATAATTATAAGGATTAT+TGG 0.226624 2:+50422502 MsG0280009327.01.T01:CDS
AACACAACAGCTTGGGTTCT+TGG 0.235897 2:-50421910 None:intergenic
GGTAGCCTTTGAGCAGAATT+TGG 0.247873 2:-50423280 None:intergenic
ATAACAATTTGGTGATTTCT+TGG 0.256668 2:+50419323 MsG0280009327.01.T01:five_prime_UTR
CCATTAAAGTATACCCTTCT+AGG 0.259971 2:-50423214 None:intergenic
AACTGTCTTGTTAGTCCTTC+CGG 0.267626 2:-50421346 None:intergenic
TGGCGTGTGCATTGCAATAA+AGG 0.319433 2:-50422447 None:intergenic
ATTCTACAATGATTTAATAA+TGG 0.323384 2:+50423105 MsG0280009327.01.T01:CDS
GCATATAAAAGATAATTATA+AGG 0.335357 2:+50422494 MsG0280009327.01.T01:CDS
TTTCTTGGAACTTCAACTTC+AGG 0.356954 2:+50419338 MsG0280009327.01.T01:five_prime_UTR
GTGCATTGCAATAAAGGTTT+TGG 0.357973 2:-50422441 None:intergenic
GGGTAACATTACTGAGATTA+GGG 0.358595 2:-50422596 None:intergenic
TCAGGCATGGAATTTGATAA+TGG 0.367674 2:+50419356 MsG0280009327.01.T01:exon
TAATGGAAGCTGGGGCTAAA+GGG 0.368160 2:+50423122 MsG0280009327.01.T01:CDS
GATGACACAGGAATGTTCTA+TGG 0.385600 2:+50423076 MsG0280009327.01.T01:intron
TGTTGCTTGCGCTCCCATCA+TGG 0.386890 2:-50421130 None:intergenic
ATGGACATCAGATGGTTATA+TGG 0.392606 2:+50419637 MsG0280009327.01.T01:CDS
ATGAACCCGGGATGGACATT+AGG 0.394711 2:+50421075 MsG0280009327.01.T01:CDS
ATCCCGGGTTCATAATGTTT+CGG 0.395348 2:-50421065 None:intergenic
AGGTGGTGTGCTAACATCTT+GGG 0.396771 2:+50421272 MsG0280009327.01.T01:CDS
TTCAAGAAATTACGCATTAG+TGG 0.401395 2:-50423454 None:intergenic
TGGGTAACATTACTGAGATT+AGG 0.404033 2:-50422597 None:intergenic
TTTGATCCATTGGATCCAAC+TGG 0.408485 2:+50419584 MsG0280009327.01.T01:CDS
CAAGTAGTTGACTTATTACC+TGG 0.416180 2:+50421213 MsG0280009327.01.T01:CDS
GGGCCAAGAAAGAAATCATA+TGG 0.421488 2:+50421106 MsG0280009327.01.T01:CDS
TGAGCAGAATTTGGCAAGAA+AGG 0.426117 2:-50423271 None:intergenic
TAGAATGAATTACACACAAT+GGG 0.426364 2:+50422557 MsG0280009327.01.T01:CDS
ATATGCCAATGCACACGAAC+AGG 0.426620 2:-50422477 None:intergenic
ATAATGGAAGCTGGGGCTAA+AGG 0.427586 2:+50423121 MsG0280009327.01.T01:CDS
TCTTGGGGACAGGACCCTTC+AGG 0.429022 2:+50421288 MsG0280009327.01.T01:CDS
AACTTACTTATGGCTTCATA+AGG 0.429069 2:-50422651 None:intergenic
GGCAAGAAAGGGTATGAATC+AGG 0.435645 2:-50423259 None:intergenic
TGTAGAGGCATTTGATCCAT+TGG 0.442199 2:+50419574 MsG0280009327.01.T01:intron
AATGATTTAATAATGGAAGC+TGG 0.446216 2:+50423112 MsG0280009327.01.T01:CDS
TCTGTAAGAATAACAGTTGA+AGG 0.452263 2:-50421438 None:intergenic
AAGATCCTGAAAGAGGTTGC+TGG 0.460769 2:+50422387 MsG0280009327.01.T01:CDS
GAGCAGAATTTGGCAAGAAA+GGG 0.471958 2:-50423270 None:intergenic
AGAAATCATATGGGCCATGA+TGG 0.480849 2:+50421116 MsG0280009327.01.T01:CDS
ATGATTTAATAATGGAAGCT+GGG 0.480905 2:+50423113 MsG0280009327.01.T01:CDS
ATAAAGAAACACAACAGCTT+GGG 0.481011 2:-50421917 None:intergenic
GTCCATCCTAATGTCCATCC+CGG 0.482281 2:-50421081 None:intergenic
AAATTGCTTGGACCAGGAGC+AGG 0.482649 2:+50421387 MsG0280009327.01.T01:CDS
TTTGTCCTGTTCGTGTGCAT+TGG 0.488987 2:+50422472 MsG0280009327.01.T01:CDS
TGCAATCTCGGCATTTCAGA+TGG 0.490026 2:+50421311 MsG0280009327.01.T01:CDS
GGACTTCTCTTGCAACTATG+AGG 0.491344 2:-50421189 None:intergenic
ATAAGTACATGTCACATTCC+AGG 0.497470 2:-50421871 None:intergenic
GATAAAGAAACACAACAGCT+TGG 0.498328 2:-50421918 None:intergenic
CATTTACACTTAAGCAAGGA+TGG 0.498361 2:+50423185 MsG0280009327.01.T01:CDS
AGCAGGATATTCATGTGGTC+CGG 0.502749 2:+50421404 MsG0280009327.01.T01:CDS
ACATTCCCAGTTGGATCCAA+TGG 0.502942 2:-50419590 None:intergenic
CTGGGAATGTGACAATAAGA+TGG 0.503167 2:+50419603 MsG0280009327.01.T01:CDS
GGACCCTTCAGGTGCAATCT+CGG 0.506260 2:+50421299 MsG0280009327.01.T01:CDS
TGGAACTTCAACTTCAGGCA+TGG 0.508911 2:+50419343 MsG0280009327.01.T01:exon
CAAGACAGTTAAACTACCTC+AGG 0.509450 2:+50421359 MsG0280009327.01.T01:CDS
GTCATCATTACAACACTTGT+TGG 0.509754 2:-50423301 None:intergenic
CACATTTAGAGAGCTGAAGT+TGG 0.510756 2:+50419397 MsG0280009327.01.T01:CDS
CAGATGGGTGTAGGACTCTC+CGG 0.515620 2:+50421327 MsG0280009327.01.T01:CDS
ATCTGAGGTGCTTATGAAGA+AGG 0.516290 2:+50423153 MsG0280009327.01.T01:CDS
AAGGTGGTGTGCTAACATCT+TGG 0.517435 2:+50421271 MsG0280009327.01.T01:CDS
ACAACAGCTTGGGTTCTTGG+AGG 0.528958 2:-50421907 None:intergenic
CTTATTGTCACATTCCCAGT+TGG 0.532085 2:-50419599 None:intergenic
TGTATTCAAAACTATAGACT+TGG 0.537143 2:-50422617 None:intergenic
CCACATGAATATCCTGCTCC+TGG 0.547701 2:-50421399 None:intergenic
GCTTGTCCAACTTGTGCTTG+TGG 0.548007 2:+50421966 MsG0280009327.01.T01:CDS
GGTAATAAGTCAACTACTTG+AGG 0.550335 2:-50421210 None:intergenic
CTCATTCTTATATCTCCAGC+TGG 0.550563 2:+50419440 MsG0280009327.01.T01:CDS
TTGATTGGATATATGTAACA+TGG 0.554518 2:+50423419 MsG0280009327.01.T01:three_prime_UTR
TCTTGCCAAATTCTGCTCAA+AGG 0.554568 2:+50423275 MsG0280009327.01.T01:CDS
TGCATATTGTAAGATGCTCC+AGG 0.567353 2:-50421231 None:intergenic
GAAATCATATGGGCCATGAT+GGG 0.570678 2:+50421117 MsG0280009327.01.T01:CDS
TGTGCTAACATCTTGGGGAC+AGG 0.571959 2:+50421278 MsG0280009327.01.T01:CDS
TACACAAACTGTTGCAAAGG+TGG 0.573020 2:+50421255 MsG0280009327.01.T01:CDS
AAATGATGCAATAATCACAT+AGG 0.574405 2:-50423326 None:intergenic
AACACATTTACACTTAAGCA+AGG 0.576553 2:+50423181 MsG0280009327.01.T01:CDS
ATGCCGAGATTGCACCTGAA+GGG 0.577152 2:-50421302 None:intergenic
TTGCTGGAAATAACAAGACT+AGG 0.578763 2:+50422403 MsG0280009327.01.T01:CDS
ATTACGCATTAGTGGTCTCA+AGG 0.579220 2:-50423446 None:intergenic
GTTGAAGGAACTCTCTTAGC+CGG 0.580085 2:-50421423 None:intergenic
GGAGCGCAAGCAACAGAACA+AGG 0.580360 2:+50421138 MsG0280009327.01.T01:CDS
ATTTACACTTAAGCAAGGAT+GGG 0.580564 2:+50423186 MsG0280009327.01.T01:CDS
CAATACACAAACTGTTGCAA+AGG 0.581528 2:+50421252 MsG0280009327.01.T01:CDS
TCGGCATTTCAGATGGGTGT+AGG 0.583929 2:+50421318 MsG0280009327.01.T01:CDS
TGATTTAATAATGGAAGCTG+GGG 0.584574 2:+50423114 MsG0280009327.01.T01:CDS
TGACAACCACAAGCACAAGT+TGG 0.585659 2:-50421972 None:intergenic
TGGGAATGTGACAATAAGAT+GGG 0.590389 2:+50419604 MsG0280009327.01.T01:CDS
ATGGCTTCATAAGGAAGAAG+TGG 0.591100 2:-50422642 None:intergenic
TCCATCCTAATGTCCATCCC+GGG 0.595187 2:-50421080 None:intergenic
AGATTCAAAGATCCTGAAAG+AGG 0.596172 2:+50422380 MsG0280009327.01.T01:CDS
AAGTTGGACAAGCTGTGACT+TGG 0.597255 2:-50421956 None:intergenic
AATGCCGAGATTGCACCTGA+AGG 0.597959 2:-50421303 None:intergenic
AAAGGGTATGAATCAGGAGG+TGG 0.602047 2:-50423253 None:intergenic
GGCCAAGAAAGAAATCATAT+GGG 0.602816 2:+50421107 MsG0280009327.01.T01:CDS
ATTATGTCATGGACATCAGA+TGG 0.603721 2:+50419629 MsG0280009327.01.T01:CDS
GATGGACATTAGGATGGACA+TGG 0.605342 2:+50421085 MsG0280009327.01.T01:CDS
GTATTCAAAACTATAGACTT+GGG 0.605359 2:-50422616 None:intergenic
ATACCGAAACATTATGAACC+CGG 0.606089 2:+50421062 MsG0280009327.01.T01:CDS
GCAATCTCGGCATTTCAGAT+GGG 0.606491 2:+50421312 MsG0280009327.01.T01:CDS
ACCCGGGATGGACATTAGGA+TGG 0.607366 2:+50421079 MsG0280009327.01.T01:CDS
TACCGAAACATTATGAACCC+GGG 0.608883 2:+50421063 MsG0280009327.01.T01:CDS
TTATTCTTACAGATGATCGT+AGG 0.609804 2:+50421448 MsG0280009327.01.T01:CDS
TTGATCCATTGGATCCAACT+GGG 0.610985 2:+50419585 MsG0280009327.01.T01:CDS
GAAACATTATGAACCCGGGA+TGG 0.613102 2:+50421067 MsG0280009327.01.T01:CDS
TAAGATGGGATATTATGTCA+TGG 0.615769 2:+50419618 MsG0280009327.01.T01:CDS
CAGCTGGAGATATAAGAATG+AGG 0.620194 2:-50419439 None:intergenic
GGTGGTGTGCTAACATCTTG+GGG 0.624710 2:+50421273 MsG0280009327.01.T01:CDS
ATAGAATGAATTACACACAA+TGG 0.628977 2:+50422556 MsG0280009327.01.T01:CDS
TAAAGGGAATGTGCAATCTG+AGG 0.631122 2:+50423138 MsG0280009327.01.T01:CDS
CCAAGCAATTTAAAATCCTG+AGG 0.636131 2:-50421375 None:intergenic
TGGGTGTAGGACTCTCCGGA+AGG 0.662739 2:+50421331 MsG0280009327.01.T01:CDS
AATGCACACGAACAGGACAA+AGG 0.669891 2:-50422470 None:intergenic
GCACACGAACAGGACAAAGG+TGG 0.685930 2:-50422467 None:intergenic
AAGAAAGGGTATGAATCAGG+AGG 0.687329 2:-50423256 None:intergenic
CCAGGAGCAGGATATTCATG+TGG 0.687880 2:+50421399 MsG0280009327.01.T01:CDS
ATGGACATTAGGATGGACAT+GGG 0.698791 2:+50421086 MsG0280009327.01.T01:CDS
AGAATGAATTACACACAATG+GGG 0.725776 2:+50422558 MsG0280009327.01.T01:CDS
ATTGTGTATGCAGATGACAC+AGG 0.753079 2:+50423064 MsG0280009327.01.T01:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAATGTTATAACTTATA+AGG - Chr2:50422313-50422332 None:intergenic 10.0%
!! TTATAAGTTATAACATTATT+TGG + Chr2:50422312-50422331 MsG0280009327.01.T01:intron 10.0%
!!! TTTTGATAATTTTATTCTTT+TGG - Chr2:50419793-50419812 None:intergenic 10.0%
!! AAGATAATTATAAGGATTAT+TGG + Chr2:50422502-50422521 MsG0280009327.01.T01:CDS 15.0%
!! ATAATGTAAAAAAATATTGC+TGG + Chr2:50420875-50420894 MsG0280009327.01.T01:intron 15.0%
!! ATTCTACAATGATTTAATAA+TGG + Chr2:50423105-50423124 MsG0280009327.01.T01:CDS 15.0%
!! GCATATAAAAGATAATTATA+AGG + Chr2:50422494-50422513 MsG0280009327.01.T01:CDS 15.0%
!! TAATGTAAAAAAATATTGCT+GGG + Chr2:50420876-50420895 MsG0280009327.01.T01:intron 15.0%
!!! ATTTTTTAAAAATAATTCCC+AGG - Chr2:50420335-50420354 None:intergenic 15.0%
!!! CTTTTTTGATGTATATATAA+GGG + Chr2:50423366-50423385 MsG0280009327.01.T01:three_prime_UTR 15.0%
!!! TCTTTTTTGATGTATATATA+AGG + Chr2:50423365-50423384 MsG0280009327.01.T01:three_prime_UTR 15.0%
!!! TTAATATTTGTTTTTTCGAT+TGG - Chr2:50420634-50420653 None:intergenic 15.0%
!! AAATTGCTATATAAAGATAG+TGG + Chr2:50420719-50420738 MsG0280009327.01.T01:intron 20.0%
!! AATAAAACTCTCAAATATAC+TGG - Chr2:50420493-50420512 None:intergenic 20.0%
!! ATAGGGATATTATATGTATT+TGG - Chr2:50422989-50423008 None:intergenic 20.0%
!! ATATTTGAAGAACTTACTTA+TGG - Chr2:50422664-50422683 None:intergenic 20.0%
!! GAATGTTCAAAAAATATGTT+TGG + Chr2:50420294-50420313 MsG0280009327.01.T01:intron 20.0%
!! TAATAGTACATTTGTATTCA+AGG - Chr2:50421811-50421830 None:intergenic 20.0%
!! TCAAGTAAACAAAATATAGA+CGG - Chr2:50422693-50422712 None:intergenic 20.0%
!! TTAATATTCGCATAATAACA+CGG + Chr2:50419970-50419989 MsG0280009327.01.T01:intron 20.0%
!! TTGCATATATGAAAAAACAT+AGG + Chr2:50419472-50419491 MsG0280009327.01.T01:intron 20.0%
!!! AAATAAATTGGCTTGAAATT+TGG - Chr2:50422858-50422877 None:intergenic 20.0%
!!! AAGACTAATAATCATGATTT+TGG - Chr2:50422203-50422222 None:intergenic 20.0%
!!! ATTTTATTTTATGCTTGTAG+AGG + Chr2:50419559-50419578 MsG0280009327.01.T01:intron 20.0%
!!! CAAAATAATATGACTTTTGT+AGG + Chr2:50420554-50420573 MsG0280009327.01.T01:intron 20.0%
!!! CGAAAAACATATTTTCAAAA+TGG + Chr2:50420056-50420075 MsG0280009327.01.T01:intron 20.0%
!!! TTATTATGTGTTACTATATC+AGG - Chr2:50419923-50419942 None:intergenic 20.0%
!!! TTATTGCATCATTTTTCATT+TGG + Chr2:50423335-50423354 MsG0280009327.01.T01:CDS 20.0%
!!! TTTTACCAAATATGATACAA+GGG - Chr2:50420377-50420396 None:intergenic 20.0%
! AAACTAATCAAGATACTATG+GGG + Chr2:50420192-50420211 MsG0280009327.01.T01:intron 25.0%
! AAATACCCTTGTATCATATT+TGG + Chr2:50420369-50420388 MsG0280009327.01.T01:intron 25.0%
! AAATGATGCAATAATCACAT+AGG - Chr2:50423329-50423348 None:intergenic 25.0%
! ACTATTTGCAATATACTCAA+AGG - Chr2:50421509-50421528 None:intergenic 25.0%
! AGTAACTGAGATTCATTTAA+AGG - Chr2:50420087-50420106 None:intergenic 25.0%
! ATAGAATGAATTACACACAA+TGG + Chr2:50422556-50422575 MsG0280009327.01.T01:CDS 25.0%
! CAAACTAATCAAGATACTAT+GGG + Chr2:50420191-50420210 MsG0280009327.01.T01:intron 25.0%
! CTAGAAAAGGATTTGAATAA+TGG + Chr2:50419881-50419900 MsG0280009327.01.T01:intron 25.0%
! CTATTTGCAATATACTCAAA+GGG - Chr2:50421508-50421527 None:intergenic 25.0%
! GAAATTCAGTCAAATACAAT+TGG + Chr2:50422101-50422120 MsG0280009327.01.T01:intron 25.0%
! GAATTATTTATTCCCATGTT+TGG - Chr2:50420941-50420960 None:intergenic 25.0%
! GTATTCAAAACTATAGACTT+GGG - Chr2:50422619-50422638 None:intergenic 25.0%
! GTTGCATCATAATCATTTAT+AGG + Chr2:50422074-50422093 MsG0280009327.01.T01:intron 25.0%
! TAATGTGGAAGTAGAAATTA+AGG - Chr2:50422027-50422046 None:intergenic 25.0%
! TAGAATGAATTACACACAAT+GGG + Chr2:50422557-50422576 MsG0280009327.01.T01:CDS 25.0%
! TCAAACTAATCAAGATACTA+TGG + Chr2:50420190-50420209 MsG0280009327.01.T01:intron 25.0%
! TGCAACACATTATAACAATT+TGG + Chr2:50419312-50419331 MsG0280009327.01.T01:five_prime_UTR 25.0%
! TGTATTCAAAACTATAGACT+TGG - Chr2:50422620-50422639 None:intergenic 25.0%
! TTAAAAGTTGGCTAATAATG+TGG - Chr2:50422042-50422061 None:intergenic 25.0%
! TTGATTGGATATATGTAACA+TGG + Chr2:50423419-50423438 MsG0280009327.01.T01:three_prime_UTR 25.0%
! TTGGATTGTACGATATTAAT+CGG - Chr2:50422839-50422858 None:intergenic 25.0%
!! AATAATCATGATTTTGGACA+CGG - Chr2:50422197-50422216 None:intergenic 25.0%
!! AATGATTTAATAATGGAAGC+TGG + Chr2:50423112-50423131 MsG0280009327.01.T01:CDS 25.0%
!! ATAACAATTTGGTGATTTCT+TGG + Chr2:50419323-50419342 MsG0280009327.01.T01:five_prime_UTR 25.0%
!! ATGATTTAATAATGGAAGCT+GGG + Chr2:50423113-50423132 MsG0280009327.01.T01:CDS 25.0%
!! CTTTTACCAAATATGATACA+AGG - Chr2:50420378-50420397 None:intergenic 25.0%
!! GATTCTTTTTGATGAATTAC+AGG - Chr2:50420466-50420485 None:intergenic 25.0%
!! GTTAATCCTGGAAATAATTT+TGG - Chr2:50420236-50420255 None:intergenic 25.0%
!! GTTTTTATTCCCAACAAAAA+GGG - Chr2:50420847-50420866 None:intergenic 25.0%
!! TTTTGATGTATATATAAGGG+AGG + Chr2:50423369-50423388 MsG0280009327.01.T01:three_prime_UTR 25.0%
!!! CACAATATAAAAGGTTTTAG+AGG - Chr2:50422257-50422276 None:intergenic 25.0%
!!! CATATTTTTTGAACATTCCT+TGG - Chr2:50420292-50420311 None:intergenic 25.0%
!!! CATCATTTTTGGAAACATTT+TGG - Chr2:50419747-50419766 None:intergenic 25.0%
!!! CTCTAAAACCTTTTATATTG+TGG + Chr2:50422255-50422274 MsG0280009327.01.T01:intron 25.0%
!!! GATTATTAGTCTTAACCATA+TGG + Chr2:50422210-50422229 MsG0280009327.01.T01:intron 25.0%
!!! GTTTTTTTAACTTTTGTGCA+TGG + Chr2:50423037-50423056 MsG0280009327.01.T01:intron 25.0%
!!! TGTTTTTATTCCCAACAAAA+AGG - Chr2:50420848-50420867 None:intergenic 25.0%
AAAATACCAAGCTTGAAATC+TGG + Chr2:50422891-50422910 MsG0280009327.01.T01:intron 30.0%
AACACATTTACACTTAAGCA+AGG + Chr2:50423181-50423200 MsG0280009327.01.T01:CDS 30.0%
AACTAATCAAGATACTATGG+GGG + Chr2:50420193-50420212 MsG0280009327.01.T01:intron 30.0%
AACTTACTTATGGCTTCATA+AGG - Chr2:50422654-50422673 None:intergenic 30.0%
ACTGCATAGGAAAAAAATAC+AGG - Chr2:50421849-50421868 None:intergenic 30.0%
AGAATGAATTACACACAATG+GGG + Chr2:50422558-50422577 MsG0280009327.01.T01:CDS 30.0%
ATAAAGAAACACAACAGCTT+GGG - Chr2:50421920-50421939 None:intergenic 30.0%
ATATGTAACCAAAGAAAACG+TGG + Chr2:50420742-50420761 MsG0280009327.01.T01:intron 30.0%
ATGCACACAAAAATATTCCA+AGG - Chr2:50420913-50420932 None:intergenic 30.0%
ATGTGACTCTATGCATTATA+GGG - Chr2:50423006-50423025 None:intergenic 30.0%
ATTTACACTTAAGCAAGGAT+GGG + Chr2:50423186-50423205 MsG0280009327.01.T01:CDS 30.0%
ATTTGTCATTATGCAAATGC+AGG + Chr2:50422355-50422374 MsG0280009327.01.T01:intron 30.0%
CTACATTTGACCATAATTCT+CGG - Chr2:50421580-50421599 None:intergenic 30.0%
GAAAAGGATTTGAATAATGG+TGG + Chr2:50419884-50419903 MsG0280009327.01.T01:intron 30.0%
GAGAAGAAATAAATTCTAGG+TGG + Chr2:50420691-50420710 MsG0280009327.01.T01:intron 30.0%
GCAGAGAAGAAATAAATTCT+AGG + Chr2:50420688-50420707 MsG0280009327.01.T01:intron 30.0%
TAAGATGGGATATTATGTCA+TGG + Chr2:50419618-50419637 MsG0280009327.01.T01:CDS 30.0%
TATGTAACCAAAGAAAACGT+GGG + Chr2:50420743-50420762 MsG0280009327.01.T01:intron 30.0%
TCCAAAAATGATGAAATCAC+TGG + Chr2:50419754-50419773 MsG0280009327.01.T01:intron 30.0%
TCTGTAAGAATAACAGTTGA+AGG - Chr2:50421441-50421460 None:intergenic 30.0%
TGCCAAAATTTGACATCATA+GGG - Chr2:50421012-50421031 None:intergenic 30.0%
TGGTTACCAAAATTATTTCC+AGG + Chr2:50420227-50420246 MsG0280009327.01.T01:intron 30.0%
TTATTCTTACAGATGATCGT+AGG + Chr2:50421448-50421467 MsG0280009327.01.T01:CDS 30.0%
TTCAAGAAATTACGCATTAG+TGG - Chr2:50423457-50423476 None:intergenic 30.0%
TTTAATACTGCCGAGAATTA+TGG + Chr2:50421567-50421586 MsG0280009327.01.T01:intron 30.0%
! ACCAGTGATTTCATCATTTT+TGG - Chr2:50419758-50419777 None:intergenic 30.0%
! CTGATCATGCTATTCTTTTA+AGG + Chr2:50419681-50419700 MsG0280009327.01.T01:intron 30.0%
! GTTGTCTTATTAAGATCAGA+CGG - Chr2:50422918-50422937 None:intergenic 30.0%
! TGATTTAATAATGGAAGCTG+GGG + Chr2:50423114-50423133 MsG0280009327.01.T01:CDS 30.0%
!! GGTTGATAATTTGAATTCCT+GGG + Chr2:50420315-50420334 MsG0280009327.01.T01:intron 30.0%
!! TGGTTGATAATTTGAATTCC+TGG + Chr2:50420314-50420333 MsG0280009327.01.T01:intron 30.0%
!! TTTTTCGATTGGATGTTAGT+AGG - Chr2:50420623-50420642 None:intergenic 30.0%
AAGAAAACGTGGGTATATTG+CGG + Chr2:50420753-50420772 MsG0280009327.01.T01:intron 35.0%
AATGAATCTCAGTTACTTCG+AGG + Chr2:50420090-50420109 MsG0280009327.01.T01:intron 35.0%
AATGGTCTTTCCAAACACAA+AGG + Chr2:50420791-50420810 MsG0280009327.01.T01:intron 35.0%
AATTCCCATCTTAGATTCCT+GGG + Chr2:50420956-50420975 MsG0280009327.01.T01:intron 35.0%
AGATTCAAAGATCCTGAAAG+AGG + Chr2:50422380-50422399 MsG0280009327.01.T01:CDS 35.0%
AGGATCTGCAATTACAATCA+AGG - Chr2:50421665-50421684 None:intergenic 35.0%
ATAAGTACATGTCACATTCC+AGG - Chr2:50421874-50421893 None:intergenic 35.0%
ATACCGAAACATTATGAACC+CGG + Chr2:50421062-50421081 MsG0280009327.01.T01:CDS 35.0%
ATGAATCTCAGTTACTTCGA+GGG + Chr2:50420091-50420110 MsG0280009327.01.T01:intron 35.0%
ATGGACATCAGATGGTTATA+TGG + Chr2:50419637-50419656 MsG0280009327.01.T01:CDS 35.0%
ATTATGTCATGGACATCAGA+TGG + Chr2:50419629-50419648 MsG0280009327.01.T01:CDS 35.0%
CAATACACAAACTGTTGCAA+AGG + Chr2:50421252-50421271 MsG0280009327.01.T01:CDS 35.0%
CATGTGACTCTATGCATTAT+AGG - Chr2:50423007-50423026 None:intergenic 35.0%
CATTGCAATCAACATGTTTG+TGG + Chr2:50422809-50422828 MsG0280009327.01.T01:intron 35.0%
CATTTACACTTAAGCAAGGA+TGG + Chr2:50423185-50423204 MsG0280009327.01.T01:CDS 35.0%
CCAAAATTTGACATCATAGG+GGG - Chr2:50421010-50421029 None:intergenic 35.0%
CCATTAAAGTATACCCTTCT+AGG - Chr2:50423217-50423236 None:intergenic 35.0%
CGACGTCTCTAATACAAATT+CGG + Chr2:50422763-50422782 MsG0280009327.01.T01:intron 35.0%
CTGCCAAAATTTGACATCAT+AGG - Chr2:50421013-50421032 None:intergenic 35.0%
GATAAAGAAACACAACAGCT+TGG - Chr2:50421921-50421940 None:intergenic 35.0%
GCCAAAATTTGACATCATAG+GGG - Chr2:50421011-50421030 None:intergenic 35.0%
GGCCAAGAAAGAAATCATAT+GGG + Chr2:50421107-50421126 MsG0280009327.01.T01:CDS 35.0%
GGGTAACATTACTGAGATTA+GGG - Chr2:50422599-50422618 None:intergenic 35.0%
GGTAATAAGTCAACTACTTG+AGG - Chr2:50421213-50421232 None:intergenic 35.0%
GTCATCATTACAACACTTGT+TGG - Chr2:50423304-50423323 None:intergenic 35.0%
GTGTAACACACATAGATGTT+TGG + Chr2:50419992-50420011 MsG0280009327.01.T01:intron 35.0%
TAATTCCCATCTTAGATTCC+TGG + Chr2:50420955-50420974 MsG0280009327.01.T01:intron 35.0%
TAGATTCGAGAAGCTAGAAA+AGG + Chr2:50419868-50419887 MsG0280009327.01.T01:intron 35.0%
TAGCATGATCAGACAAAGTT+TGG - Chr2:50419673-50419692 None:intergenic 35.0%
TCAGGCATGGAATTTGATAA+TGG + Chr2:50419356-50419375 MsG0280009327.01.T01:exon 35.0%
TGGGAATGTGACAATAAGAT+GGG + Chr2:50419604-50419623 MsG0280009327.01.T01:CDS 35.0%
TGGGTAACATTACTGAGATT+AGG - Chr2:50422600-50422619 None:intergenic 35.0%
TGGTTACAAATTGAATTCCC+AGG - Chr2:50420976-50420995 None:intergenic 35.0%
TTAATCTCCACAATTACACG+TGG + Chr2:50420115-50420134 MsG0280009327.01.T01:intron 35.0%
TTATTCCCAACAAAAAGGGT+GGG - Chr2:50420843-50420862 None:intergenic 35.0%
TTGCTGGAAATAACAAGACT+AGG + Chr2:50422403-50422422 MsG0280009327.01.T01:CDS 35.0%
TTTATTCCCAACAAAAAGGG+TGG - Chr2:50420844-50420863 None:intergenic 35.0%
TTTCTTGGAACTTCAACTTC+AGG + Chr2:50419338-50419357 MsG0280009327.01.T01:five_prime_UTR 35.0%
! AACCATCAAGGTTTTCGAAA+AGG - Chr2:50421685-50421704 None:intergenic 35.0%
! AACCTTTTCCCAGGAATAAA+AGG + Chr2:50420253-50420272 MsG0280009327.01.T01:intron 35.0%
! AATTCCCAGGAATCTAAGAT+GGG - Chr2:50420963-50420982 None:intergenic 35.0%
! AGTAGGCAATGCACTTTTAT+TGG - Chr2:50420606-50420625 None:intergenic 35.0%
! ATAAAACCCACCCTTTTTGT+TGG + Chr2:50420834-50420853 MsG0280009327.01.T01:intron 35.0%
! ATCCTTTTCGAAAACCTTGA+TGG + Chr2:50421680-50421699 MsG0280009327.01.T01:intron 35.0%
! CAAGTAGTTGACTTATTACC+TGG + Chr2:50421213-50421232 MsG0280009327.01.T01:CDS 35.0%
! CAATATACCCACGTTTTCTT+TGG - Chr2:50420753-50420772 None:intergenic 35.0%
! CCAAGCAATTTAAAATCCTG+AGG - Chr2:50421378-50421397 None:intergenic 35.0%
! CCTAGAAGGGTATACTTTAA+TGG + Chr2:50423214-50423233 MsG0280009327.01.T01:CDS 35.0%
! CCTCAGGATTTTAAATTGCT+TGG + Chr2:50421375-50421394 MsG0280009327.01.T01:CDS 35.0%
! GATTTTAAATTGCTTGGACC+AGG + Chr2:50421381-50421400 MsG0280009327.01.T01:CDS 35.0%
! GTGCATTGCAATAAAGGTTT+TGG - Chr2:50422444-50422463 None:intergenic 35.0%
! TAAAACCCACCCTTTTTGTT+GGG + Chr2:50420835-50420854 MsG0280009327.01.T01:intron 35.0%
! TCTCTGCACTAATTTTGCTA+TGG - Chr2:50420675-50420694 None:intergenic 35.0%
!! ACGCTTTAAAGAAACTGTTC+TGG + Chr2:50421712-50421731 MsG0280009327.01.T01:intron 35.0%
!! ATATGTTTTTCGATACGCAC+TGG - Chr2:50420048-50420067 None:intergenic 35.0%
!! CTATGATGTCAAATTTTGGC+AGG + Chr2:50421011-50421030 MsG0280009327.01.T01:intron 35.0%
!!! CGAGAGTGTTTGATTTTGAT+TGG + Chr2:50423404-50423423 MsG0280009327.01.T01:three_prime_UTR 35.0%
AACTGCGGCCACAATATAAA+AGG - Chr2:50422266-50422285 None:intergenic 40.0%
AAGGTGTGGACTTTATTCCA+AGG + Chr2:50420272-50420291 MsG0280009327.01.T01:intron 40.0%
AATTGCACGCATTCATACAG+TGG - Chr2:50422951-50422970 None:intergenic 40.0%
ACACGAACTCCTATGGTTAA+GGG - Chr2:50420020-50420039 None:intergenic 40.0%
AGAAATCATATGGGCCATGA+TGG + Chr2:50421116-50421135 MsG0280009327.01.T01:CDS 40.0%
ATCCCGGGTTCATAATGTTT+CGG - Chr2:50421068-50421087 None:intergenic 40.0%
ATGCAAAGCAATTTACCAGC+TGG - Chr2:50419458-50419477 None:intergenic 40.0%
ATGGACATTAGGATGGACAT+GGG + Chr2:50421086-50421105 MsG0280009327.01.T01:CDS 40.0%
ATGGCTTCATAAGGAAGAAG+TGG - Chr2:50422645-50422664 None:intergenic 40.0%
ATTACGCATTAGTGGTCTCA+AGG - Chr2:50423449-50423468 None:intergenic 40.0%
ATTGTGTATGCAGATGACAC+AGG + Chr2:50423064-50423083 MsG0280009327.01.T01:intron 40.0%
CAAGACAGTTAAACTACCTC+AGG + Chr2:50421359-50421378 MsG0280009327.01.T01:CDS 40.0%
CACATTTAGAGAGCTGAAGT+TGG + Chr2:50419397-50419416 MsG0280009327.01.T01:CDS 40.0%
CAGCTGGAGATATAAGAATG+AGG - Chr2:50419442-50419461 None:intergenic 40.0%
CGGTTAACATCCTTTGTGTT+TGG - Chr2:50420804-50420823 None:intergenic 40.0%
CTATCATCCACGTGTAATTG+TGG - Chr2:50420125-50420144 None:intergenic 40.0%
CTCATTCTTATATCTCCAGC+TGG + Chr2:50419440-50419459 MsG0280009327.01.T01:CDS 40.0%
CTCGACAGCAGTTTAAAAGT+TGG - Chr2:50422054-50422073 None:intergenic 40.0%
CTGGGAATGTGACAATAAGA+TGG + Chr2:50419603-50419622 MsG0280009327.01.T01:CDS 40.0%
CTTATTGTCACATTCCCAGT+TGG - Chr2:50419602-50419621 None:intergenic 40.0%
GAAATCATATGGGCCATGAT+GGG + Chr2:50421117-50421136 MsG0280009327.01.T01:CDS 40.0%
GAATTCCCAGGAATCTAAGA+TGG - Chr2:50420964-50420983 None:intergenic 40.0%
GAGCAGAATTTGGCAAGAAA+GGG - Chr2:50423273-50423292 None:intergenic 40.0%
GATGACACAGGAATGTTCTA+TGG + Chr2:50423076-50423095 MsG0280009327.01.T01:intron 40.0%
GCTGGGAATAATTCATTCCT+TGG + Chr2:50420893-50420912 MsG0280009327.01.T01:intron 40.0%
GGCCCATATGATTTCTTTCT+TGG - Chr2:50421112-50421131 None:intergenic 40.0%
GGGCCAAGAAAGAAATCATA+TGG + Chr2:50421106-50421125 MsG0280009327.01.T01:CDS 40.0%
TAAAGGGAATGTGCAATCTG+AGG + Chr2:50423138-50423157 MsG0280009327.01.T01:CDS 40.0%
TAACTGCTATTGCAGCCATA+TGG - Chr2:50422228-50422247 None:intergenic 40.0%
TACACAAACTGTTGCAAAGG+TGG + Chr2:50421255-50421274 MsG0280009327.01.T01:CDS 40.0%
TACCGAAACATTATGAACCC+GGG + Chr2:50421063-50421082 MsG0280009327.01.T01:CDS 40.0%
TATTTCCAGCAACCTCTTTC+AGG - Chr2:50422395-50422414 None:intergenic 40.0%
TCTTGCCAAATTCTGCTCAA+AGG + Chr2:50423275-50423294 MsG0280009327.01.T01:CDS 40.0%
TGAATCTCAGTTACTTCGAG+GGG + Chr2:50420092-50420111 MsG0280009327.01.T01:intron 40.0%
TGAGCAGAATTTGGCAAGAA+AGG - Chr2:50423274-50423293 None:intergenic 40.0%
TGCATATTGTAAGATGCTCC+AGG - Chr2:50421234-50421253 None:intergenic 40.0%
TGGTAAAAGAGACGTGTCTT+TGG + Chr2:50420389-50420408 MsG0280009327.01.T01:intron 40.0%
TGTGCATGTCTACCAAACAT+GGG + Chr2:50420926-50420945 MsG0280009327.01.T01:intron 40.0%
TGTTTGGATCCCTTAACCAT+AGG + Chr2:50420008-50420027 MsG0280009327.01.T01:intron 40.0%
TTCATACAGTGGCACATATG+TGG - Chr2:50422940-50422959 None:intergenic 40.0%
TTGATCCATTGGATCCAACT+GGG + Chr2:50419585-50419604 MsG0280009327.01.T01:CDS 40.0%
TTTCCCAGGAATAAAAGGTG+TGG + Chr2:50420258-50420277 MsG0280009327.01.T01:intron 40.0%
TTTGATCCATTGGATCCAAC+TGG + Chr2:50419584-50419603 MsG0280009327.01.T01:CDS 40.0%
! AACTGTCTTGTTAGTCCTTC+CGG - Chr2:50421349-50421368 None:intergenic 40.0%
! AAGAAAGGGTATGAATCAGG+AGG - Chr2:50423259-50423278 None:intergenic 40.0%
! AAGTCCACACCTTTTATTCC+TGG - Chr2:50420265-50420284 None:intergenic 40.0%
! AGTCCACACCTTTTATTCCT+GGG - Chr2:50420264-50420283 None:intergenic 40.0%
! ATCTGAGGTGCTTATGAAGA+AGG + Chr2:50423153-50423172 MsG0280009327.01.T01:CDS 40.0%
! CAACTTTTAAACTGCTGTCG+AGG + Chr2:50422052-50422071 MsG0280009327.01.T01:intron 40.0%
! CACCTTTTATTCCTGGGAAA+AGG - Chr2:50420258-50420277 None:intergenic 40.0%
! CCCCCTATGATGTCAAATTT+TGG + Chr2:50421007-50421026 MsG0280009327.01.T01:intron 40.0%
!! AGCGTTGATTGTAACCATCA+AGG - Chr2:50421697-50421716 None:intergenic 40.0%
!! TGTAGAGGCATTTGATCCAT+TGG + Chr2:50419574-50419593 MsG0280009327.01.T01:intron 40.0%
!!! GGGTGGGTTTTATTTATTCC+CGG - Chr2:50420827-50420846 None:intergenic 40.0%
!!! GGTATATTGCGGTTTTAGGA+GGG + Chr2:50420764-50420783 MsG0280009327.01.T01:intron 40.0%
!!! TGGGTTTTATTTATTCCCGG+CGG - Chr2:50420824-50420843 None:intergenic 40.0%
!!! TTTTTTCCTATGCAGTGTCC+TGG + Chr2:50421853-50421872 MsG0280009327.01.T01:intron 40.0%
AACACAACAGCTTGGGTTCT+TGG - Chr2:50421913-50421932 None:intergenic 45.0%
AACCATAGGAGTTCGTGTCA+TGG + Chr2:50420022-50420041 MsG0280009327.01.T01:intron 45.0%
AAGATCCTGAAAGAGGTTGC+TGG + Chr2:50422387-50422406 MsG0280009327.01.T01:CDS 45.0%
AAGGTGGTGTGCTAACATCT+TGG + Chr2:50421271-50421290 MsG0280009327.01.T01:CDS 45.0%
AAGTTGGACAAGCTGTGACT+TGG - Chr2:50421959-50421978 None:intergenic 45.0%
AATGCACACGAACAGGACAA+AGG - Chr2:50422473-50422492 None:intergenic 45.0%
ACACAAAGGATGTTAACCGC+CGG + Chr2:50420805-50420824 MsG0280009327.01.T01:intron 45.0%
ACATTCCCAGTTGGATCCAA+TGG - Chr2:50419593-50419612 None:intergenic 45.0%
AGCAGGATATTCATGTGGTC+CGG + Chr2:50421404-50421423 MsG0280009327.01.T01:CDS 45.0%
AGGTGGTGTGCTAACATCTT+GGG + Chr2:50421272-50421291 MsG0280009327.01.T01:CDS 45.0%
ATATGCCAATGCACACGAAC+AGG - Chr2:50422480-50422499 None:intergenic 45.0%
GAAACATTATGAACCCGGGA+TGG + Chr2:50421067-50421086 MsG0280009327.01.T01:CDS 45.0%
GACACGAACTCCTATGGTTA+AGG - Chr2:50420021-50420040 None:intergenic 45.0%
GATGGACATTAGGATGGACA+TGG + Chr2:50421085-50421104 MsG0280009327.01.T01:CDS 45.0%
GCAATCTCGGCATTTCAGAT+GGG + Chr2:50421312-50421331 MsG0280009327.01.T01:CDS 45.0%
GGACTTCTCTTGCAACTATG+AGG - Chr2:50421192-50421211 None:intergenic 45.0%
GGTAGCCTTTGAGCAGAATT+TGG - Chr2:50423283-50423302 None:intergenic 45.0%
GTGTGCATGTCTACCAAACA+TGG + Chr2:50420925-50420944 MsG0280009327.01.T01:intron 45.0%
GTTGAAGGAACTCTCTTAGC+CGG - Chr2:50421426-50421445 None:intergenic 45.0%
TAATGGAAGCTGGGGCTAAA+GGG + Chr2:50423122-50423141 MsG0280009327.01.T01:CDS 45.0%
TCCTGGGAAAAGGTTAATCC+TGG - Chr2:50420248-50420267 None:intergenic 45.0%
TGACAACCACAAGCACAAGT+TGG - Chr2:50421975-50421994 None:intergenic 45.0%
TGCAATCTCGGCATTTCAGA+TGG + Chr2:50421311-50421330 MsG0280009327.01.T01:CDS 45.0%
TGGAACTTCAACTTCAGGCA+TGG + Chr2:50419343-50419362 MsG0280009327.01.T01:exon 45.0%
TGGCGTGTGCATTGCAATAA+AGG - Chr2:50422450-50422469 None:intergenic 45.0%
TTTGTCCTGTTCGTGTGCAT+TGG + Chr2:50422472-50422491 MsG0280009327.01.T01:CDS 45.0%
! AAAGGGTATGAATCAGGAGG+TGG - Chr2:50423256-50423275 None:intergenic 45.0%
! ATAATGGAAGCTGGGGCTAA+AGG + Chr2:50423121-50423140 MsG0280009327.01.T01:CDS 45.0%
! CGTGGGTATATTGCGGTTTT+AGG + Chr2:50420760-50420779 MsG0280009327.01.T01:intron 45.0%
! GGCAAGAAAGGGTATGAATC+AGG - Chr2:50423262-50423281 None:intergenic 45.0%
! TCCAGGATTAACCTTTTCCC+AGG + Chr2:50420244-50420263 MsG0280009327.01.T01:intron 45.0%
!! AAGGATGGGCTTTTCCTAGA+AGG + Chr2:50423200-50423219 MsG0280009327.01.T01:CDS 45.0%
!! AGGATGGGCTTTTCCTAGAA+GGG + Chr2:50423201-50423220 MsG0280009327.01.T01:CDS 45.0%
!!! CGGTTTTAGGAGGGTAGAAA+TGG + Chr2:50420773-50420792 MsG0280009327.01.T01:intron 45.0%
!!! GGGTATATTGCGGTTTTAGG+AGG + Chr2:50420763-50420782 MsG0280009327.01.T01:intron 45.0%
!! GATTAAAAAAATAAATAAAT+TGG - Chr2:50422870-50422889 None:intergenic 5.0%
AAATTGCTTGGACCAGGAGC+AGG + Chr2:50421387-50421406 MsG0280009327.01.T01:CDS 50.0%
AATGCCGAGATTGCACCTGA+AGG - Chr2:50421306-50421325 None:intergenic 50.0%
ACAACAGCTTGGGTTCTTGG+AGG - Chr2:50421910-50421929 None:intergenic 50.0%
ATGAACCCGGGATGGACATT+AGG + Chr2:50421075-50421094 MsG0280009327.01.T01:CDS 50.0%
ATGCCGAGATTGCACCTGAA+GGG - Chr2:50421305-50421324 None:intergenic 50.0%
CACAAAGCGACGATCACTAC+AGG + Chr2:50421779-50421798 MsG0280009327.01.T01:intron 50.0%
CACAAAGGATGTTAACCGCC+GGG + Chr2:50420806-50420825 MsG0280009327.01.T01:intron 50.0%
CACATTCCAGGACACTGCAT+AGG - Chr2:50421862-50421881 None:intergenic 50.0%
CCACATGAATATCCTGCTCC+TGG - Chr2:50421402-50421421 None:intergenic 50.0%
CCAGGAGCAGGATATTCATG+TGG + Chr2:50421399-50421418 MsG0280009327.01.T01:CDS 50.0%
CTGCAATACGACTGAGACTG+AGG - Chr2:50421612-50421631 None:intergenic 50.0%
GACGGTCCAGATTTCAAGCT+TGG - Chr2:50422900-50422919 None:intergenic 50.0%
GCTTGTCCAACTTGTGCTTG+TGG + Chr2:50421966-50421985 MsG0280009327.01.T01:CDS 50.0%
GGTGGTGTGCTAACATCTTG+GGG + Chr2:50421273-50421292 MsG0280009327.01.T01:CDS 50.0%
GTCCATCCTAATGTCCATCC+CGG - Chr2:50421084-50421103 None:intergenic 50.0%
TCCATCCTAATGTCCATCCC+GGG - Chr2:50421083-50421102 None:intergenic 50.0%
TCGGCATTTCAGATGGGTGT+AGG + Chr2:50421318-50421337 MsG0280009327.01.T01:CDS 50.0%
TGTGCTAACATCTTGGGGAC+AGG + Chr2:50421278-50421297 MsG0280009327.01.T01:CDS 50.0%
!! CATAGGGGGCGTTTGTTTCA+TGG - Chr2:50420996-50421015 None:intergenic 50.0%
ACCCGGGATGGACATTAGGA+TGG + Chr2:50421079-50421098 MsG0280009327.01.T01:CDS 55.0%
CAGATGGGTGTAGGACTCTC+CGG + Chr2:50421327-50421346 MsG0280009327.01.T01:CDS 55.0%
GCACACGAACAGGACAAAGG+TGG - Chr2:50422470-50422489 None:intergenic 55.0%
GGACCCTTCAGGTGCAATCT+CGG + Chr2:50421299-50421318 MsG0280009327.01.T01:CDS 55.0%
GGAGCGCAAGCAACAGAACA+AGG + Chr2:50421138-50421157 MsG0280009327.01.T01:CDS 55.0%
GGCCATGACACGAACTCCTA+TGG - Chr2:50420027-50420046 None:intergenic 55.0%
! TGTTGCTTGCGCTCCCATCA+TGG - Chr2:50421133-50421152 None:intergenic 55.0%
!! CTATGGGGGCGTTTGTTTCG+TGG + Chr2:50420207-50420226 MsG0280009327.01.T01:intron 55.0%
GCGTCCTGTGACTGCAACTG+CGG - Chr2:50422281-50422300 None:intergenic 60.0%
TCTTGGGGACAGGACCCTTC+AGG + Chr2:50421288-50421307 MsG0280009327.01.T01:CDS 60.0%
TGGGTGTAGGACTCTCCGGA+AGG + Chr2:50421331-50421350 MsG0280009327.01.T01:CDS 60.0%
GTGGCCGCAGTTGCAGTCAC+AGG + Chr2:50422274-50422293 MsG0280009327.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr2 gene 50419311 50423487 50419311 ID=MsG0280009327.01;Name=MsG0280009327.01
Chr2 mRNA 50419311 50423487 50419311 ID=MsG0280009327.01.T01;Parent=MsG0280009327.01;Name=MsG0280009327.01.T01;_AED=0.32;_eAED=0.32;_QI=51|1|1|1|1|1|6|124|453
Chr2 exon 50419311 50419461 50419311 ID=MsG0280009327.01.T01:exon:6403;Parent=MsG0280009327.01.T01
Chr2 exon 50419579 50419658 50419579 ID=MsG0280009327.01.T01:exon:6404;Parent=MsG0280009327.01.T01
Chr2 exon 50421033 50421489 50421033 ID=MsG0280009327.01.T01:exon:6405;Parent=MsG0280009327.01.T01
Chr2 exon 50421868 50422015 50421868 ID=MsG0280009327.01.T01:exon:6406;Parent=MsG0280009327.01.T01
Chr2 exon 50422377 50422666 50422377 ID=MsG0280009327.01.T01:exon:6407;Parent=MsG0280009327.01.T01
Chr2 exon 50423077 50423487 50423077 ID=MsG0280009327.01.T01:exon:6408;Parent=MsG0280009327.01.T01
Chr2 five_prime_UTR 50419311 50419361 50419311 ID=MsG0280009327.01.T01:five_prime_utr;Parent=MsG0280009327.01.T01
Chr2 CDS 50419362 50419461 50419362 ID=MsG0280009327.01.T01:cds;Parent=MsG0280009327.01.T01
Chr2 CDS 50419579 50419658 50419579 ID=MsG0280009327.01.T01:cds;Parent=MsG0280009327.01.T01
Chr2 CDS 50421033 50421489 50421033 ID=MsG0280009327.01.T01:cds;Parent=MsG0280009327.01.T01
Chr2 CDS 50421868 50422015 50421868 ID=MsG0280009327.01.T01:cds;Parent=MsG0280009327.01.T01
Chr2 CDS 50422377 50422666 50422377 ID=MsG0280009327.01.T01:cds;Parent=MsG0280009327.01.T01
Chr2 CDS 50423077 50423363 50423077 ID=MsG0280009327.01.T01:cds;Parent=MsG0280009327.01.T01
Chr2 three_prime_UTR 50423364 50423487 50423364 ID=MsG0280009327.01.T01:three_prime_utr;Parent=MsG0280009327.01.T01
Gene Sequence

>MsG0280009327.01.T01

ATGGAATTTGATAATGGTAAACATCATCAGAGATGCACATTTAGAGAGCTGAAGTTGGTTGCATTTGTTGCTCTATGCCTCATTCTTATATCTCCAGCTGAGGCATTTGATCCATTGGATCCAACTGGGAATGTGACAATAAGATGGGATATTATGTCATGGACATCAGATGGTTATATGGCAACTGTAACTTTGTTTAACTTTCAACTATACCGAAACATTATGAACCCGGGATGGACATTAGGATGGACATGGGCCAAGAAAGAAATCATATGGGCCATGATGGGAGCGCAAGCAACAGAACAAGGAGATTGTTCAAAGTTCAAGTTAAAGATTCCTCATAGTTGCAAGAGAAGTCCTCAAGTAGTTGACTTATTACCTGGAGCATCTTACAATATGCAATACACAAACTGTTGCAAAGGTGGTGTGCTAACATCTTGGGGACAGGACCCTTCAGGTGCAATCTCGGCATTTCAGATGGGTGTAGGACTCTCCGGAAGGACTAACAAGACAGTTAAACTACCTCAGGATTTTAAATTGCTTGGACCAGGAGCAGGATATTCATGTGGTCCGGCTAAGAGAGTTCCTTCAACTGTTATTCTTACAGATGATCGTAGGCGAAAAGCTCAAGCTTTGATGTCCTGGAATGTGACATGTACTTATTCACAATTTCTTGCCTCCAAGAACCCAAGCTGTTGTGTTTCTTTATCAACATTCTACAATGACCAAGTCACAGCTTGTCCAACTTGTGCTTGTGGTTGTCAGAATAATGCTACTTGCGTAACGAAAGATTCAAAGATCCTGAAAGAGGTTGCTGGAAATAACAAGACTAGGAAGAGTGATATCGCACCAAAACCTTTATTGCAATGCACACGCCACCTTTGTCCTGTTCGTGTGCATTGGCATATAAAAGATAATTATAAGGATTATTGGCGTGTAAAGATTGCAATCATCAACTTCAAGTATAGAATGAATTACACACAATGGGGTCTTGTTGTGCAACACCCTAATCTCAGTAATGTTACCCAAGTCTATAGTTTTGAATACATGCCACTTCTTCCTTATGAAGCCATAAATGACACAGGAATGTTCTATGGTTTGAAATTCTACAATGATTTAATAATGGAAGCTGGGGCTAAAGGGAATGTGCAATCTGAGGTGCTTATGAAGAAGGACAAGAACACATTTACACTTAAGCAAGGATGGGCTTTTCCTAGAAGGGTATACTTTAATGGTGATGAATGTATGCTTCCACCTCCTGATTCATACCCTTTCTTGCCAAATTCTGCTCAAAGGCTACCAACAAGTGTTGTAATGATGACAACCTATGTGATTATTGCATCATTTTTCATTTGGTTTTGA
Protein sequence

>MsG0280009327.01.T01

MEFDNGKHHQRCTFRELKLVAFVALCLILISPAEAFDPLDPTGNVTIRWDIMSWTSDGYMATVTLFNFQLYRNIMNPGWTLGWTWAKKEIIWAMMGAQATEQGDCSKFKLKIPHSCKRSPQVVDLLPGASYNMQYTNCCKGGVLTSWGQDPSGAISAFQMGVGLSGRTNKTVKLPQDFKLLGPGAGYSCGPAKRVPSTVILTDDRRRKAQALMSWNVTCTYSQFLASKNPSCCVSLSTFYNDQVTACPTCACGCQNNATCVTKDSKILKEVAGNNKTRKSDIAPKPLLQCTRHLCPVRVHWHIKDNYKDYWRVKIAIINFKYRMNYTQWGLVVQHPNLSNVTQVYSFEYMPLLPYEAINDTGMFYGLKFYNDLIMEAGAKGNVQSEVLMKKDKNTFTLKQGWAFPRRVYFNGDECMLPPPDSYPFLPNSAQRLPTSVVMMTTYVIIASFFIWF*