Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880045339.01.T05 | XP_013446195.1 | 93.456 | 596 | 27 | 4 | 1 | 587 | 1 | 593 | 0 | 667 |
| MsG0880045339.01.T04 | XP_013446195.1 | 89.262 | 596 | 31 | 5 | 1 | 566 | 1 | 593 | 0 | 620 |
| MsG0880045339.01.T03 | XP_013446195.1 | 93.59 | 624 | 32 | 3 | 1 | 619 | 1 | 621 | 0 | 736 |
| MsG0880045339.01.T02 | XP_013446195.1 | 88.622 | 624 | 35 | 6 | 1 | 591 | 1 | 621 | 0 | 681 |
| MsG0880045339.01.T01 | XP_013446195.1 | 69.92 | 625 | 32 | 8 | 1 | 473 | 1 | 621 | 3.98E-155 | 464 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880045339.01.T01 | P12255 | 32.877 | 219 | 105 | 10 | 160 | 362 | 3271 | 3463 | 3.24E-11 | 69.7 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880045339.01.T01 | A0A072TS30 | 69.920 | 625 | 32 | 8 | 1 | 473 | 1 | 621 | 1.90e-155 | 464 |
| MsG0880045339.01.T02 | A0A072TS30 | 88.622 | 624 | 35 | 6 | 1 | 591 | 1 | 621 | 0.0 | 681 |
| MsG0880045339.01.T03 | A0A072TS30 | 93.590 | 624 | 32 | 3 | 1 | 619 | 1 | 621 | 0.0 | 736 |
| MsG0880045339.01.T04 | A0A072TS30 | 89.262 | 596 | 31 | 5 | 1 | 566 | 1 | 593 | 0.0 | 620 |
| MsG0880045339.01.T05 | A0A072TS30 | 93.456 | 596 | 27 | 4 | 1 | 587 | 1 | 593 | 0.0 | 667 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0880044994.01 | MsG0880045339.01 | 0.889527 | 2.236410e-73 | 1.810938e-69 |
| MsG0880045339.01 | MsG0880047773.01 | 0.896189 | 4.684536e-76 | 5.013028e-72 |
| MsG0780040592.01 | MsG0880045339.01 | 0.855800 | 4.945661e-62 | 1.155716e-58 |
| MsG0880042557.01 | MsG0880045339.01 | 0.828580 | 8.305891e-55 | 8.289935e-52 |
| MsG0280010891.01 | MsG0880045339.01 | 0.870050 | 1.954569e-66 | 7.498531e-63 |
| MsG0280010892.01 | MsG0880045339.01 | 0.875815 | 2.288986e-68 | 1.084129e-64 |
| MsG0280010893.01 | MsG0880045339.01 | 0.867061 | 1.806690e-65 | 6.223618e-62 |
| MsG0480020552.01 | MsG0880045339.01 | 0.919204 | 6.027958e-87 | 1.912616e-82 |
| MsG0480020815.01 | MsG0880045339.01 | 0.918734 | 1.081052e-86 | 3.344082e-82 |
| MsG0480020816.01 | MsG0880045339.01 | 0.891464 | 3.880702e-74 | 3.406249e-70 |
| MsG0480020817.01 | MsG0880045339.01 | 0.938451 | 6.582294e-99 | 6.348170e-94 |
| MsG0480020818.01 | MsG0880045339.01 | 0.926054 | 7.932150e-91 | 3.662384e-86 |
| MsG0480023113.01 | MsG0880045339.01 | 0.910614 | 1.538714e-82 | 3.168632e-78 |
| MsG0480023114.01 | MsG0880045339.01 | 0.929064 | 1.187359e-92 | 6.494040e-88 |
| MsG0480023115.01 | MsG0880045339.01 | 0.929666 | 5.007569e-93 | 2.831947e-88 |
| MsG0480023116.01 | MsG0880045339.01 | 0.925219 | 2.467523e-90 | 1.089067e-85 |
| MsG0280006934.01 | MsG0880045339.01 | 0.839890 | 1.208512e-57 | 1.692335e-54 |
| MsG0280009327.01 | MsG0880045339.01 | 0.864329 | 1.315080e-64 | 4.113099e-61 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880045339.01.T05 | MTR_8g069925 | 93.456 | 596 | 27 | 4 | 1 | 587 | 1 | 593 | 0.0 | 667 |
| MsG0880045339.01.T04 | MTR_8g069925 | 89.262 | 596 | 31 | 5 | 1 | 566 | 1 | 593 | 0.0 | 620 |
| MsG0880045339.01.T03 | MTR_8g069925 | 93.590 | 624 | 32 | 3 | 1 | 619 | 1 | 621 | 0.0 | 736 |
| MsG0880045339.01.T02 | MTR_8g069925 | 88.622 | 624 | 35 | 6 | 1 | 591 | 1 | 621 | 0.0 | 681 |
| MsG0880045339.01.T01 | MTR_8g069925 | 69.920 | 625 | 32 | 8 | 1 | 473 | 1 | 621 | 4.82e-159 | 464 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 186 sgRNAs with CRISPR-Local
Find 247 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATTCTAGGGGATGGGGTTT+TGG | 0.138205 | 8:-57767427 | None:intergenic |
| TGCTTGTGGGGTGGTGGTTC+TGG | 0.203685 | 8:-57767810 | None:intergenic |
| CTGTTGTTTGTTTGTATTAC+TGG | 0.204393 | 8:-57766521 | None:intergenic |
| TGTGGTGGTGGTTGAATTCT+AGG | 0.226591 | 8:-57767441 | None:intergenic |
| AGGGATTATAGTTGGTAATT+TGG | 0.235922 | 8:-57766809 | None:intergenic |
| TTTGGAACCTTTGCAGGTGC+TGG | 0.241500 | 8:-57767567 | None:intergenic |
| AATTGTAACTTAAAGTAAAA+TGG | 0.244945 | 8:-57768027 | None:intergenic |
| TTGGCCGGTGCTGGTGCTTT+TGG | 0.262072 | 8:-57767585 | None:intergenic |
| TGCTGGTGCTGGTGCTTCTT+TGG | 0.270949 | 8:-57767604 | None:intergenic |
| TTACAATGGCTGCACTGTTT+TGG | 0.271774 | 8:+57766191 | None:intergenic |
| AGCTGCCGTGACTGTGGTTA+TGG | 0.300372 | 8:-57766617 | None:intergenic |
| TGAAGTTGTACTTGGCAAAT+TGG | 0.303149 | 8:-57766284 | None:intergenic |
| GAAGGAACAGGTGATGATTT+TGG | 0.306619 | 8:-57767711 | None:intergenic |
| AACTTCACAGGAGCGAGTTT+TGG | 0.324618 | 8:-57767372 | None:intergenic |
| GGTGATGGTGGGAGAATTGC+TGG | 0.332216 | 8:-57767735 | None:intergenic |
| CTTAATGCTGGTGTAACCTT+TGG | 0.332628 | 8:-57767402 | None:intergenic |
| ACCGTTGGAGTTGCAACTTT+TGG | 0.332924 | 8:-57767138 | None:intergenic |
| GCAGGTGCTGGGGATACCTT+TGG | 0.332989 | 8:-57767555 | None:intergenic |
| GATGTTGGAGTTGTAGCTTT+TGG | 0.341303 | 8:-57767228 | None:intergenic |
| GGTGCTTCTTTGGCCGGTGC+TGG | 0.344916 | 8:-57767594 | None:intergenic |
| ATAGGCTGTTGTTTGTATAA+TGG | 0.354379 | 8:-57766436 | None:intergenic |
| TTGGAACCTTTGCAGGTGCT+GGG | 0.364855 | 8:-57767566 | None:intergenic |
| GCTGTTGGAGTTGTAACTTT+AGG | 0.364940 | 8:-57767183 | None:intergenic |
| GGTGCTGGTGTGTCTATTGT+AGG | 0.366893 | 8:-57767768 | None:intergenic |
| ATTGTTGAACTTGAACTTGT+AGG | 0.370326 | 8:-57767897 | None:intergenic |
| GGTTTCACAGGAGAAGGTTT+TGG | 0.373314 | 8:-57767288 | None:intergenic |
| GTGGTTGAATTCTAGGGGAT+GGG | 0.376592 | 8:-57767434 | None:intergenic |
| GGTTCTGGTGCATCATCTTC+AGG | 0.377101 | 8:-57767795 | None:intergenic |
| CGAAGCTGCTGTTGGCAACT+TGG | 0.377529 | 8:-57766842 | None:intergenic |
| GCAGGAGTTGCCGCCACAAT+AGG | 0.378335 | 8:-57766499 | None:intergenic |
| GCTGTTGGAGTCGTAGCTTT+TGG | 0.378998 | 8:-57767093 | None:intergenic |
| TCTTTGTCTGGTGCGGGTGC+TGG | 0.381750 | 8:-57767648 | None:intergenic |
| GATGTTGGAGTCGCGACTTT+GGG | 0.385779 | 8:-57767048 | None:intergenic |
| GAAACAGGTGGTATAGATAA+TGG | 0.387049 | 8:-57767495 | None:intergenic |
| TCATCAGCTAGTGGTGGTGC+TGG | 0.387208 | 8:-57767936 | None:intergenic |
| CTCTTGTGCTTGTGGGGTGG+TGG | 0.387724 | 8:-57767816 | None:intergenic |
| GCTGCCGTGACTGTGGTTAT+GGG | 0.389073 | 8:-57766616 | None:intergenic |
| GGTGCCGGTGTTTCTTTGTC+TGG | 0.389256 | 8:-57767660 | None:intergenic |
| ACAGGAGTTGCTGCCACAAT+AGG | 0.390855 | 8:-57766706 | None:intergenic |
| GAACTTGAACTTGTAGGTTC+TGG | 0.392200 | 8:-57767891 | None:intergenic |
| CAAGTTCAACAATCATTAGA+AGG | 0.392890 | 8:+57767907 | MsG0880045339.01.T03:CDS |
| GATAATGGTGGTAGAGAAAC+AGG | 0.397687 | 8:-57767480 | None:intergenic |
| GCAGGAGTTGCTGCCACAAT+AGG | 0.401887 | 8:-57766454 | None:intergenic |
| ACCTTTGGTGGTTTAGAAGC+TGG | 0.402400 | 8:-57767540 | None:intergenic |
| GGTGCTGGTGCTTCTTTGGC+CGG | 0.404875 | 8:-57767600 | None:intergenic |
| TTAATGCTGGTGTAACCTTT+GGG | 0.404886 | 8:-57767401 | None:intergenic |
| GCAGGAGTTGCCGCCACAAT+AGG | 0.406498 | 8:-57766544 | None:intergenic |
| GGCAACTTGGAAGGTGCGGC+AGG | 0.411164 | 8:-57766829 | None:intergenic |
| AGATATTACCGCACTAGGAC+TGG | 0.411786 | 8:-57768000 | None:intergenic |
| GGTGTTGGTGCAGGTGATGG+TGG | 0.414784 | 8:-57767747 | None:intergenic |
| CATCAGCTAGTGGTGGTGCT+GGG | 0.417438 | 8:-57767935 | None:intergenic |
| AGCTGCCGTGACCGTGGCTG+TGG | 0.419087 | 8:-57766365 | None:intergenic |
| TCATCTTCAGGTGCTGGTGC+TGG | 0.431144 | 8:-57767783 | None:intergenic |
| GATGCTGGAGACGTAACTTT+AGG | 0.431586 | 8:-57767003 | None:intergenic |
| AGAATTGCTGGGGAAGGAAC+AGG | 0.434822 | 8:-57767723 | None:intergenic |
| TGCTGCTGAGATCGTGGTCG+AGG | 0.438663 | 8:-57766779 | None:intergenic |
| GGTTGGTTGTTTGCTAGACA+AGG | 0.438663 | 8:-57766923 | None:intergenic |
| GTTATGGGTTTGTTAGAAGT+AGG | 0.442540 | 8:-57766601 | None:intergenic |
| TTGGGGACAGGTGACTTCAC+AGG | 0.448425 | 8:-57767030 | None:intergenic |
| GTGGTGGTGGTTGAATTCTA+GGG | 0.448441 | 8:-57767440 | None:intergenic |
| GGTAATGGTGGAAGTGAAAC+AGG | 0.449450 | 8:-57767510 | None:intergenic |
| GGAGAAGTTGCTGCTACAAC+AGG | 0.450503 | 8:-57766328 | None:intergenic |
| GGTGCATCATCTTCAGGTGC+TGG | 0.451679 | 8:-57767789 | None:intergenic |
| TGGTTGAATTCTAGGGGATG+GGG | 0.451686 | 8:-57767433 | None:intergenic |
| TGTTTGTTTGTATTACTAGC+AGG | 0.457462 | 8:-57766562 | None:intergenic |
| GGTTTCACAGGTGCAGCTGT+TGG | 0.463863 | 8:-57767198 | None:intergenic |
| TTGTGTGTAGGTGCTGGTGC+TGG | 0.464570 | 8:-57767615 | None:intergenic |
| AGATGTTGGAGTCGCGACTT+TGG | 0.466079 | 8:-57767049 | None:intergenic |
| TGTTTATTTGTACTACTAGC+AGG | 0.474859 | 8:-57766472 | None:intergenic |
| GGTGGTTGAATTCTAGGGGA+TGG | 0.477465 | 8:-57767435 | None:intergenic |
| TTGTATAATGGCAGTGTTGA+AGG | 0.479559 | 8:-57766424 | None:intergenic |
| TTTGGAACTGGTGGTTTCAC+AGG | 0.480404 | 8:-57767120 | None:intergenic |
| GGTGCTGGGGATACCTTTGG+TGG | 0.480574 | 8:-57767552 | None:intergenic |
| GTAGGTGTTGGTGCAGGTGA+TGG | 0.481502 | 8:-57767750 | None:intergenic |
| GGTGTTTCTTTGTCTGGTGC+GGG | 0.485076 | 8:-57767654 | None:intergenic |
| TTTGGGACTGGCAACTTCAC+AGG | 0.489154 | 8:-57767384 | None:intergenic |
| GGTTTCACAGGAGAGGCTGT+TGG | 0.490275 | 8:-57767108 | None:intergenic |
| GACTTCACAGGGGAAGATGC+TGG | 0.490421 | 8:-57767018 | None:intergenic |
| TGAAGGGTCCGATGGATTTG+TGG | 0.492048 | 8:-57766407 | None:intergenic |
| TTTGGAACTAGTGGTTTCAC+AGG | 0.493081 | 8:-57767300 | None:intergenic |
| GGAGACGTAACTTTAGGAAC+TGG | 0.493413 | 8:-57766997 | None:intergenic |
| ATCAGCTAGTGGTGGTGCTG+GGG | 0.494871 | 8:-57767934 | None:intergenic |
| GGTTGTTGTTTCGCTACAAA+CGG | 0.496927 | 8:-57766307 | None:intergenic |
| TTTGGAACCAGTGGTTTCAC+AGG | 0.497212 | 8:-57767210 | None:intergenic |
| TTTGGAACTGGTGACTTCAC+GGG | 0.497698 | 8:-57767075 | None:intergenic |
| ATTATAGTTGGTAATTTGGA+TGG | 0.497793 | 8:-57766805 | None:intergenic |
| GATTTCAAAGGCGCAGATGT+TGG | 0.508978 | 8:-57767243 | None:intergenic |
| TGGGGACAGGTGACTTCACA+GGG | 0.509083 | 8:-57767029 | None:intergenic |
| ACTAGTGGTTTCACAGGAGA+AGG | 0.509936 | 8:-57767294 | None:intergenic |
| CGGTGTTTCTTTGTCTGGTG+CGG | 0.510168 | 8:-57767655 | None:intergenic |
| GTGTTGGTGCAGGTGATGGT+GGG | 0.510337 | 8:-57767746 | None:intergenic |
| TGTTTGTTTGTATTACTGGC+AGG | 0.510981 | 8:-57766517 | None:intergenic |
| CTAGGACTGGGTGCTGGTGA+TGG | 0.517224 | 8:-57767987 | None:intergenic |
| GATTTGACAGGAGCAGTTGT+TGG | 0.523966 | 8:-57767333 | None:intergenic |
| GGAGTCGCGACTTTGGGGAC+AGG | 0.526763 | 8:-57767042 | None:intergenic |
| GCAGATGGTGTACTAGAAGT+TGG | 0.527732 | 8:-57766865 | None:intergenic |
| TTTGGAACTGGTGATTTCAA+AGG | 0.533900 | 8:-57767255 | None:intergenic |
| GACTTCACGGGAGCAGATGT+TGG | 0.535590 | 8:-57767063 | None:intergenic |
| TGGAACCTTTGCAGGTGCTG+GGG | 0.538225 | 8:-57767565 | None:intergenic |
| TCAGCTAGTGGTGGTGCTGG+GGG | 0.540058 | 8:-57767933 | None:intergenic |
| TTTCTCTTGTGCTTGTGGGG+TGG | 0.542270 | 8:-57767819 | None:intergenic |
| GGGTTTGTTAGAAGTAGGAG+AGG | 0.542804 | 8:-57766758 | None:intergenic |
| TTGACAGGAGCAGTTGTTGG+AGG | 0.545208 | 8:-57767330 | None:intergenic |
| GGTGTGTCTATTGTAGGTGT+TGG | 0.547086 | 8:-57767762 | None:intergenic |
| TCTGGAACTGGTGATTTGAC+AGG | 0.548439 | 8:-57767345 | None:intergenic |
| GGCAGTGTTGAAGGGTCCGA+TGG | 0.550562 | 8:-57766415 | None:intergenic |
| GGTTCCAAAAGCACCAGCAC+CGG | 0.550807 | 8:+57767581 | MsG0880045339.01.T03:CDS |
| TTGTGTGTAGGTGCTGGTGC+CGG | 0.552274 | 8:-57767675 | None:intergenic |
| TGGTGGTGGTTGAATTCTAG+GGG | 0.552720 | 8:-57767439 | None:intergenic |
| GGTGCGGCAGGGATTATAGT+TGG | 0.553825 | 8:-57766817 | None:intergenic |
| GTTGGTTGTTTGCTAGACAA+GGG | 0.553964 | 8:-57766922 | None:intergenic |
| GAAGTAGGAGAAGTTGCTGC+TGG | 0.555616 | 8:-57766586 | None:intergenic |
| GCTGTGGGTTTGTTAGAAGT+AGG | 0.560234 | 8:-57766349 | None:intergenic |
| GTTGTACTTGGCAAATTGGA+AGG | 0.562092 | 8:-57766280 | None:intergenic |
| TTTGTGGTTGGCAACTTCGA+TGG | 0.564553 | 8:-57766391 | None:intergenic |
| GAAGCTGGTGGCAATGGTAA+TGG | 0.565289 | 8:-57767525 | None:intergenic |
| GAAGTAGGAGAGGTTGCTGC+TGG | 0.566340 | 8:-57766748 | None:intergenic |
| TTCGTGGTTGGCAACTTCGA+TGG | 0.567282 | 8:-57766643 | None:intergenic |
| TCTATTGTAGGTGTTGGTGC+AGG | 0.569333 | 8:-57767756 | None:intergenic |
| AGCTGCACCTGTGAAACCAC+TGG | 0.570651 | 8:+57767203 | MsG0880045339.01.T03:CDS |
| TTGTCTAGTGGCAATGTGGA+AGG | 0.571611 | 8:-57766676 | None:intergenic |
| GTCGAGGGTTTGTTAGAAGT+AGG | 0.572486 | 8:-57766763 | None:intergenic |
| GCAGGCGGTTGAGTGGTGGT+TGG | 0.573828 | 8:-57766940 | None:intergenic |
| GCTGCCGTGACCGTGGCTGT+GGG | 0.573904 | 8:-57766364 | None:intergenic |
| CGCACCAGACAAAGAAACAC+CGG | 0.574209 | 8:+57767656 | MsG0880045339.01.T03:CDS |
| GCTGCTGAGATCGTGGTCGA+GGG | 0.574789 | 8:-57766778 | None:intergenic |
| AACTGGTGGTTTCACAGGAG+AGG | 0.575160 | 8:-57767115 | None:intergenic |
| ACAAACGGTGAAGTTGTACT+TGG | 0.576267 | 8:-57766292 | None:intergenic |
| TCCAAAAGTTGCAACTCCAA+CGG | 0.576649 | 8:+57767137 | MsG0880045339.01.T03:CDS |
| GGCAATGTGGAAGGTGCAGA+TGG | 0.577063 | 8:-57766667 | None:intergenic |
| GAGCATTGATTGAGGCTAGA+GGG | 0.579571 | 8:-57766240 | None:intergenic |
| GGTGGGAGAATTGCTGGGGA+AGG | 0.580187 | 8:-57767729 | None:intergenic |
| GCTGCTGTTGGCAACTTGGA+AGG | 0.580282 | 8:-57766838 | None:intergenic |
| AGCTGCAGGCGGTTGAGTGG+TGG | 0.580923 | 8:-57766944 | None:intergenic |
| GGTTGCACCTGCAAAACCAC+TGG | 0.581757 | 8:+57767158 | MsG0880045339.01.T03:CDS |
| GGGGAAGTTGCTACCACAGT+AGG | 0.582185 | 8:-57766901 | None:intergenic |
| GAAGTTGGCGAAGCTGCTGT+TGG | 0.582733 | 8:-57766850 | None:intergenic |
| GTGATGGTGGGAGAATTGCT+GGG | 0.585483 | 8:-57767734 | None:intergenic |
| GGTGCAGATGGATTCGTGGT+TGG | 0.586259 | 8:-57766655 | None:intergenic |
| TGTGAAGTTGCCAGTCCCAA+AGG | 0.587433 | 8:+57767386 | MsG0880045339.01.T03:CDS |
| TGTATAATGGCAGTGTTGAA+GGG | 0.595029 | 8:-57766423 | None:intergenic |
| GTTGTAACTTTAGGAACCAG+TGG | 0.598613 | 8:-57767174 | None:intergenic |
| TTCTAACAAACCCACAGCCA+CGG | 0.599602 | 8:+57766354 | MsG0880045339.01.T03:CDS |
| GGTATCCCCAGCACCTGCAA+AGG | 0.600249 | 8:+57767560 | MsG0880045339.01.T03:CDS |
| GGTTTAGAAGCTGGTGGCAA+TGG | 0.600418 | 8:-57767531 | None:intergenic |
| GATATTACCGCACTAGGACT+GGG | 0.602120 | 8:-57767999 | None:intergenic |
| TGGTGCTGCTGCTGAGATCG+TGG | 0.602747 | 8:-57766785 | None:intergenic |
| AAATAAACAACAGCCTATTG+TGG | 0.603463 | 8:+57766486 | MsG0880045339.01.T03:intron |
| ACCGCACTAGGACTGGGTGC+TGG | 0.604435 | 8:-57767993 | None:intergenic |
| TTGAGGCTAGAGGGTAGCAT+AGG | 0.606074 | 8:-57766231 | None:intergenic |
| TGCAGCTGCAGGCGGTTGAG+TGG | 0.607510 | 8:-57766947 | None:intergenic |
| TACTACAGTGAGTTCAGATG+AGG | 0.608314 | 8:+57767962 | MsG0880045339.01.T03:CDS |
| ATGTTGGAGTCGCGACTTTG+GGG | 0.616046 | 8:-57767047 | None:intergenic |
| AAACAAACAACAGCCTATTG+TGG | 0.620655 | 8:+57766531 | MsG0880045339.01.T03:CDS |
| GAAGTTGCTACCACAGTAGG+TGG | 0.621383 | 8:-57766898 | None:intergenic |
| GCTGGTGTAACCTTTGGGAC+TGG | 0.622487 | 8:-57767396 | None:intergenic |
| GGAAGGTGCAGATGGATTCG+TGG | 0.623437 | 8:-57766659 | None:intergenic |
| GGGTCCGATGGATTTGTGGT+TGG | 0.624838 | 8:-57766403 | None:intergenic |
| ACCAGCTTCTAAACCACCAA+AGG | 0.625434 | 8:+57767539 | MsG0880045339.01.T03:CDS |
| GCAACTTGGAAGGTGCGGCA+GGG | 0.627474 | 8:-57766828 | None:intergenic |
| TTGGTTGTTTGCTAGACAAG+GGG | 0.634527 | 8:-57766921 | None:intergenic |
| ACTACAGTGAGTTCAGATGA+GGG | 0.637655 | 8:+57767963 | MsG0880045339.01.T03:CDS |
| TGAGCATTGATTGAGGCTAG+AGG | 0.640763 | 8:-57766241 | None:intergenic |
| ACCAGCACCCAGTCCTAGTG+CGG | 0.642251 | 8:+57767992 | MsG0880045339.01.T03:CDS |
| ATACAAACAACAGCCTATTG+TGG | 0.642615 | 8:+57766441 | MsG0880045339.01.T03:CDS |
| TTTGGTGGTTTAGAAGCTGG+TGG | 0.642888 | 8:-57767537 | None:intergenic |
| GCTGGTGGCAATGGTAATGG+TGG | 0.643492 | 8:-57767522 | None:intergenic |
| GTAGTATTATCATCAGCTAG+TGG | 0.646596 | 8:-57767945 | None:intergenic |
| TGGTGCAGCTGCCGTGACTG+TGG | 0.647996 | 8:-57766623 | None:intergenic |
| GTGTGATTGAGCATTGATTG+AGG | 0.648171 | 8:-57766248 | None:intergenic |
| GTAGGAGAGGTTGCTGCTGG+TGG | 0.649813 | 8:-57766745 | None:intergenic |
| GTTGCCAACCACAAATCCAT+CGG | 0.651630 | 8:+57766399 | MsG0880045339.01.T03:CDS |
| TAAACAACAGCCTATTGTGG+CGG | 0.657290 | 8:+57766489 | MsG0880045339.01.T03:intron |
| TGGTGCAGCTGCCGTGACCG+TGG | 0.659686 | 8:-57766371 | None:intergenic |
| GTATTATCATCAGCTAGTGG+TGG | 0.662925 | 8:-57767942 | None:intergenic |
| TTGTTTGTCTAGTGGCAATG+TGG | 0.664510 | 8:-57766680 | None:intergenic |
| ACAGGTGGTATAGATAATGG+TGG | 0.665011 | 8:-57767492 | None:intergenic |
| CAAACCCATAACCACAGTCA+CGG | 0.667319 | 8:+57766612 | MsG0880045339.01.T03:CDS |
| TGTTGGCAACTTGGAAGGTG+CGG | 0.669544 | 8:-57766833 | None:intergenic |
| CAAACAACAGCCTATTGTGG+CGG | 0.674147 | 8:+57766534 | MsG0880045339.01.T03:CDS |
| AGACAAACAAAAGCCTATTG+TGG | 0.680059 | 8:+57766693 | MsG0880045339.01.T03:CDS |
| TGGTTGTTTGCTAGACAAGG+GGG | 0.699788 | 8:-57766920 | None:intergenic |
| CAAACCCACAGCCACGGTCA+CGG | 0.711372 | 8:+57766360 | MsG0880045339.01.T03:CDS |
| TGATGGTGGGAGAATTGCTG+GGG | 0.713120 | 8:-57767733 | None:intergenic |
| AATGGTGGAAGTGAAACAGG+TGG | 0.744272 | 8:-57767507 | None:intergenic |
| GGGGACAGGTGACTTCACAG+GGG | 0.779622 | 8:-57767028 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGTTACAATTATATATTTA+TGG | + | Chr8:57768039-57768058 | MsG0880045339.01.T03:intron | 10.0% |
| !!! | TAATTTTTTTTTCATATGTA+TGG | + | Chr8:57768351-57768370 | MsG0880045339.01.T03:three_prime_UTR | 10.0% |
| !! | AAACATAAAATCATAAGATT+TGG | - | Chr8:57768155-57768174 | None:intergenic | 15.0% |
| !! | AATTGTAACTTAAAGTAAAA+TGG | - | Chr8:57768030-57768049 | None:intergenic | 15.0% |
| ! | CAATACAATGAAAGAACAAA+AGG | - | Chr8:57768418-57768437 | None:intergenic | 25.0% |
| ! | TATATATTTATGGACCTCTT+TGG | + | Chr8:57768049-57768068 | MsG0880045339.01.T03:intron | 25.0% |
| ! | TCAAGTTACACATAACAAAA+TGG | - | Chr8:57768247-57768266 | None:intergenic | 25.0% |
| ! | TTTGTTCTTTCATTGTATTG+TGG | + | Chr8:57768418-57768437 | MsG0880045339.01.T03:three_prime_UTR | 25.0% |
| !! | TGATTTTATGTTTCACAGAA+TGG | + | Chr8:57768162-57768181 | MsG0880045339.01.T03:intron | 25.0% |
| !!! | ATGATTTAGACTTGTTAATG+CGG | - | Chr8:57768086-57768105 | None:intergenic | 25.0% |
| !!! | ATTATAGTTGGTAATTTGGA+TGG | - | Chr8:57766808-57766827 | None:intergenic | 25.0% |
| AAATAAACAACAGCCTATTG+TGG | + | Chr8:57766486-57766505 | MsG0880045339.01.T03:intron | 30.0% | |
| ATTGTTGAACTTGAACTTGT+AGG | - | Chr8:57767900-57767919 | None:intergenic | 30.0% | |
| CAAGTTCAACAATCATTAGA+AGG | + | Chr8:57767907-57767926 | MsG0880045339.01.T03:CDS | 30.0% | |
| TGTTTATTTGTACTACTAGC+AGG | - | Chr8:57766475-57766494 | None:intergenic | 30.0% | |
| TGTTTGTTTGTATTACTAGC+AGG | - | Chr8:57766565-57766584 | None:intergenic | 30.0% | |
| ! | ATAGGCTGTTGTTTGTATAA+TGG | - | Chr8:57766439-57766458 | None:intergenic | 30.0% |
| ! | CTGTTGTTTGTTTGTATTAC+TGG | - | Chr8:57766524-57766543 | None:intergenic | 30.0% |
| !! | AGGGATTATAGTTGGTAATT+TGG | - | Chr8:57766812-57766831 | None:intergenic | 30.0% |
| !!! | TTTTTTTCTCTTGTGCTTGT+GGG | - | Chr8:57767826-57767845 | None:intergenic | 30.0% |
| AAACAAACAACAGCCTATTG+TGG | + | Chr8:57766531-57766550 | MsG0880045339.01.T03:CDS | 35.0% | |
| AGACAAACAAAAGCCTATTG+TGG | + | Chr8:57766693-57766712 | MsG0880045339.01.T03:CDS | 35.0% | |
| ATACAAACAACAGCCTATTG+TGG | + | Chr8:57766441-57766460 | MsG0880045339.01.T03:CDS | 35.0% | |
| CAGAAGATGCTATATATACC+AGG | + | Chr8:57768274-57768293 | MsG0880045339.01.T03:three_prime_UTR | 35.0% | |
| GAAAAAGATATTACCGCACT+AGG | - | Chr8:57768008-57768027 | None:intergenic | 35.0% | |
| GAAACAGGTGGTATAGATAA+TGG | - | Chr8:57767498-57767517 | None:intergenic | 35.0% | |
| GTAGTATTATCATCAGCTAG+TGG | - | Chr8:57767948-57767967 | None:intergenic | 35.0% | |
| GTATATATAGCATCTTCTGC+AGG | - | Chr8:57768273-57768292 | None:intergenic | 35.0% | |
| TGAAGTTGTACTTGGCAAAT+TGG | - | Chr8:57766287-57766306 | None:intergenic | 35.0% | |
| TGTTTGTTTGTATTACTGGC+AGG | - | Chr8:57766520-57766539 | None:intergenic | 35.0% | |
| TTAATGCTGGTGTAACCTTT+GGG | - | Chr8:57767404-57767423 | None:intergenic | 35.0% | |
| ! | GCTTTCTTCTTTTTGTGTGT+AGG | - | Chr8:57767690-57767709 | None:intergenic | 35.0% |
| ! | TAGGAACTGGTGATTTTACA+GGG | - | Chr8:57766987-57767006 | None:intergenic | 35.0% |
| ! | TGTATAATGGCAGTGTTGAA+GGG | - | Chr8:57766426-57766445 | None:intergenic | 35.0% |
| ! | TTAGGAACTGGTGATTTTAC+AGG | - | Chr8:57766988-57767007 | None:intergenic | 35.0% |
| ! | TTGTATAATGGCAGTGTTGA+AGG | - | Chr8:57766427-57766446 | None:intergenic | 35.0% |
| ! | TTTGGAACTGGTGATTTCAA+AGG | - | Chr8:57767258-57767277 | None:intergenic | 35.0% |
| !! | ATAGGCTTTTGTTTGTCTAG+TGG | - | Chr8:57766691-57766710 | None:intergenic | 35.0% |
| !! | GGTTGTTTTGTACTACTAAC+AGG | - | Chr8:57766727-57766746 | None:intergenic | 35.0% |
| !! | GTTATGGGTTTGTTAGAAGT+AGG | - | Chr8:57766604-57766623 | None:intergenic | 35.0% |
| !!! | AGAGAAACAGGTGCTTTTTT+GGG | - | Chr8:57767471-57767490 | None:intergenic | 35.0% |
| !!! | GGTTTTGATTTTGGAACTAG+TGG | - | Chr8:57767312-57767331 | None:intergenic | 35.0% |
| !!! | GTTGTTGGAGGTTTTGATTT+TGG | - | Chr8:57767321-57767340 | None:intergenic | 35.0% |
| !!! | GTTTTTTTCTCTTGTGCTTG+TGG | - | Chr8:57767827-57767846 | None:intergenic | 35.0% |
| !!! | TAGAGAAACAGGTGCTTTTT+TGG | - | Chr8:57767472-57767491 | None:intergenic | 35.0% |
| !!! | TTTTTTCTCTTGTGCTTGTG+GGG | - | Chr8:57767825-57767844 | None:intergenic | 35.0% |
| AATGGCAATCGCAAATACAC+CGG | - | Chr8:57768229-57768248 | None:intergenic | 40.0% | |
| ACAAACGGTGAAGTTGTACT+TGG | - | Chr8:57766295-57766314 | None:intergenic | 40.0% | |
| ACATCTTTCTCCATTGCACA+TGG | - | Chr8:57768200-57768219 | None:intergenic | 40.0% | |
| ACTACAGTGAGTTCAGATGA+GGG | + | Chr8:57767963-57767982 | MsG0880045339.01.T03:CDS | 40.0% | |
| ATTCATCCGAAGCTGTTACT+TGG | + | Chr8:57768316-57768335 | MsG0880045339.01.T03:three_prime_UTR | 40.0% | |
| ATTTATGGACCTCTTTGGTC+TGG | + | Chr8:57768054-57768073 | MsG0880045339.01.T03:intron | 40.0% | |
| CACAATCTTACCATGTGCAA+TGG | + | Chr8:57768187-57768206 | MsG0880045339.01.T03:CDS | 40.0% | |
| CAGGCTCATATGACAAAACA+TGG | + | Chr8:57768293-57768312 | MsG0880045339.01.T03:three_prime_UTR | 40.0% | |
| CTTAATGCTGGTGTAACCTT+TGG | - | Chr8:57767405-57767424 | None:intergenic | 40.0% | |
| GAACTTGAACTTGTAGGTTC+TGG | - | Chr8:57767894-57767913 | None:intergenic | 40.0% | |
| GCTGTTGGAGTTGTAACTTT+AGG | - | Chr8:57767186-57767205 | None:intergenic | 40.0% | |
| GTATTATCATCAGCTAGTGG+TGG | - | Chr8:57767945-57767964 | None:intergenic | 40.0% | |
| GTTGTACTTGGCAAATTGGA+AGG | - | Chr8:57766283-57766302 | None:intergenic | 40.0% | |
| TAAACAACAGCCTATTGTGG+CGG | + | Chr8:57766489-57766508 | MsG0880045339.01.T03:intron | 40.0% | |
| TACTACAGTGAGTTCAGATG+AGG | + | Chr8:57767962-57767981 | MsG0880045339.01.T03:CDS | 40.0% | |
| TCCAAAAGTTGCAACTCCAA+CGG | + | Chr8:57767137-57767156 | MsG0880045339.01.T03:CDS | 40.0% | |
| TGCAAACCAAGTAACAGCTT+CGG | - | Chr8:57768325-57768344 | None:intergenic | 40.0% | |
| TGCTAAAAAACCACCTACTG+TGG | + | Chr8:57766888-57766907 | MsG0880045339.01.T03:CDS | 40.0% | |
| TGGAGAAAGATGTTGTCAAC+CGG | + | Chr8:57768207-57768226 | MsG0880045339.01.T03:CDS | 40.0% | |
| TTGTTTGTCTAGTGGCAATG+TGG | - | Chr8:57766683-57766702 | None:intergenic | 40.0% | |
| ! | ACAGGTGGTATAGATAATGG+TGG | - | Chr8:57767495-57767514 | None:intergenic | 40.0% |
| ! | CATGTTTTGTCATATGAGCC+TGG | - | Chr8:57768295-57768314 | None:intergenic | 40.0% |
| ! | GAAGGAACAGGTGATGATTT+TGG | - | Chr8:57767714-57767733 | None:intergenic | 40.0% |
| ! | GATAATGGTGGTAGAGAAAC+AGG | - | Chr8:57767483-57767502 | None:intergenic | 40.0% |
| ! | GATGTTGGAGTTGTAGCTTT+TGG | - | Chr8:57767231-57767250 | None:intergenic | 40.0% |
| ! | GGTGCTTTCTTTTTGTGTGT+AGG | - | Chr8:57767630-57767649 | None:intergenic | 40.0% |
| ! | GTTGGTTGTTTGCTAGACAA+GGG | - | Chr8:57766925-57766944 | None:intergenic | 40.0% |
| ! | GTTGTAACTTTAGGAACCAG+TGG | - | Chr8:57767177-57767196 | None:intergenic | 40.0% |
| ! | TTCTTTTTGTGTGTAGGTGC+TGG | - | Chr8:57767624-57767643 | None:intergenic | 40.0% |
| ! | TTGGTTGTTTGCTAGACAAG+GGG | - | Chr8:57766924-57766943 | None:intergenic | 40.0% |
| ! | TTTGGAACTAGTGGTTTCAC+AGG | - | Chr8:57767303-57767322 | None:intergenic | 40.0% |
| !! | GGTTGTTGTTTCGCTACAAA+CGG | - | Chr8:57766310-57766329 | None:intergenic | 40.0% |
| !! | GTGTGATTGAGCATTGATTG+AGG | - | Chr8:57766251-57766270 | None:intergenic | 40.0% |
| !!! | TTTTGGAACTGGTGACTTCA+CGG | - | Chr8:57767079-57767098 | None:intergenic | 40.0% |
| ACCAGCTTCTAAACCACCAA+AGG | + | Chr8:57767539-57767558 | MsG0880045339.01.T03:CDS | 45.0% | |
| ACTAGTGGTTTCACAGGAGA+AGG | - | Chr8:57767297-57767316 | None:intergenic | 45.0% | |
| AGATATTACCGCACTAGGAC+TGG | - | Chr8:57768003-57768022 | None:intergenic | 45.0% | |
| CAAACAACAGCCTATTGTGG+CGG | + | Chr8:57766444-57766463 | MsG0880045339.01.T03:CDS | 45.0% | |
| CAAACCCATAACCACAGTCA+CGG | + | Chr8:57766612-57766631 | MsG0880045339.01.T03:CDS | 45.0% | |
| GATATTACCGCACTAGGACT+GGG | - | Chr8:57768002-57768021 | None:intergenic | 45.0% | |
| GATGCTGGAGACGTAACTTT+AGG | - | Chr8:57767006-57767025 | None:intergenic | 45.0% | |
| GATTTGACAGGAGCAGTTGT+TGG | - | Chr8:57767336-57767355 | None:intergenic | 45.0% | |
| GCAGATGGTGTACTAGAAGT+TGG | - | Chr8:57766868-57766887 | None:intergenic | 45.0% | |
| GGTGTGTCTATTGTAGGTGT+TGG | - | Chr8:57767765-57767784 | None:intergenic | 45.0% | |
| GTTGCCAACCACAAATCCAT+CGG | + | Chr8:57766399-57766418 | MsG0880045339.01.T03:CDS | 45.0% | |
| TTCTAACAAACCCACAGCCA+CGG | + | Chr8:57766354-57766373 | MsG0880045339.01.T03:CDS | 45.0% | |
| TTGTCTAGTGGCAATGTGGA+AGG | - | Chr8:57766679-57766698 | None:intergenic | 45.0% | |
| TTTGTGGTTGGCAACTTCGA+TGG | - | Chr8:57766394-57766413 | None:intergenic | 45.0% | |
| ! | AACTTCACAGGAGCGAGTTT+TGG | - | Chr8:57767375-57767394 | None:intergenic | 45.0% |
| ! | AATGGTGGAAGTGAAACAGG+TGG | - | Chr8:57767510-57767529 | None:intergenic | 45.0% |
| ! | ACCGTTGGAGTTGCAACTTT+TGG | - | Chr8:57767141-57767160 | None:intergenic | 45.0% |
| ! | ACCTTTGGTGGTTTAGAAGC+TGG | - | Chr8:57767543-57767562 | None:intergenic | 45.0% |
| ! | ACTGGTGATTTTACAGGGCT+TGG | - | Chr8:57766982-57767001 | None:intergenic | 45.0% |
| ! | GATTTCAAAGGCGCAGATGT+TGG | - | Chr8:57767246-57767265 | None:intergenic | 45.0% |
| ! | GGAGACGTAACTTTAGGAAC+TGG | - | Chr8:57767000-57767019 | None:intergenic | 45.0% |
| ! | GGTAATGGTGGAAGTGAAAC+AGG | - | Chr8:57767513-57767532 | None:intergenic | 45.0% |
| ! | GGTTGGTTGTTTGCTAGACA+AGG | - | Chr8:57766926-57766945 | None:intergenic | 45.0% |
| ! | GGTTTCACAGGAGAAGGTTT+TGG | - | Chr8:57767291-57767310 | None:intergenic | 45.0% |
| ! | GTGGTTGAATTCTAGGGGAT+GGG | - | Chr8:57767437-57767456 | None:intergenic | 45.0% |
| ! | TCTGGAACTGGTGATTTGAC+AGG | - | Chr8:57767348-57767367 | None:intergenic | 45.0% |
| ! | TGGTTGAATTCTAGGGGATG+GGG | - | Chr8:57767436-57767455 | None:intergenic | 45.0% |
| ! | TGGTTGTTTGCTAGACAAGG+GGG | - | Chr8:57766923-57766942 | None:intergenic | 45.0% |
| ! | TTTGGAACCAGTGGTTTCAC+AGG | - | Chr8:57767213-57767232 | None:intergenic | 45.0% |
| ! | TTTGGAACTGGTGACTTCAC+GGG | - | Chr8:57767078-57767097 | None:intergenic | 45.0% |
| ! | TTTGGAACTGGTGGTTTCAC+AGG | - | Chr8:57767123-57767142 | None:intergenic | 45.0% |
| ! | TTTGGTGGTTTAGAAGCTGG+TGG | - | Chr8:57767540-57767559 | None:intergenic | 45.0% |
| !! | AATTCTAGGGGATGGGGTTT+TGG | - | Chr8:57767430-57767449 | None:intergenic | 45.0% |
| !! | ATTCTAGGGGATGGGGTTTT+GGG | - | Chr8:57767429-57767448 | None:intergenic | 45.0% |
| !! | GAGCATTGATTGAGGCTAGA+GGG | - | Chr8:57766243-57766262 | None:intergenic | 45.0% |
| !! | GCTGTGGGTTTGTTAGAAGT+AGG | - | Chr8:57766352-57766371 | None:intergenic | 45.0% |
| !! | GGGTTTGTTAGAAGTAGGAG+AGG | - | Chr8:57766347-57766366 | None:intergenic | 45.0% |
| !! | GTCGAGGGTTTGTTAGAAGT+AGG | - | Chr8:57766766-57766785 | None:intergenic | 45.0% |
| !! | GTGGTGGTGGTTGAATTCTA+GGG | - | Chr8:57767443-57767462 | None:intergenic | 45.0% |
| !! | TCTATTGTAGGTGTTGGTGC+AGG | - | Chr8:57767759-57767778 | None:intergenic | 45.0% |
| !! | TGAGCATTGATTGAGGCTAG+AGG | - | Chr8:57766244-57766263 | None:intergenic | 45.0% |
| !! | TGGTGGTGGTTGAATTCTAG+GGG | - | Chr8:57767442-57767461 | None:intergenic | 45.0% |
| !! | TGTGGTGGTGGTTGAATTCT+AGG | - | Chr8:57767444-57767463 | None:intergenic | 45.0% |
| !! | TTAGGAACCAGTGGTTTTGC+AGG | - | Chr8:57767168-57767187 | None:intergenic | 45.0% |
| !!! | AGTTTTGGAGGATCTGGAAC+TGG | - | Chr8:57767360-57767379 | None:intergenic | 45.0% |
| !!! | GAAACAGGTGCTTTTTTGGG+TGG | - | Chr8:57767468-57767487 | None:intergenic | 45.0% |
| !!! | GGAGTTGCAACTTTTGGAAC+TGG | - | Chr8:57767135-57767154 | None:intergenic | 45.0% |
| !!! | GGTGGTTTTTTAGCAGCAGA+TGG | - | Chr8:57766883-57766902 | None:intergenic | 45.0% |
| !!! | GTTGCAACTTTTGGAACTGG+TGG | - | Chr8:57767132-57767151 | None:intergenic | 45.0% |
| !!! | GTTGTAGCTTTTGGAACCAG+TGG | - | Chr8:57767222-57767241 | None:intergenic | 45.0% |
| AACTGGTGGTTTCACAGGAG+AGG | - | Chr8:57767118-57767137 | None:intergenic | 50.0% | |
| ACAGGAGTTGCTGCCACAAT+AGG | - | Chr8:57766709-57766728 | None:intergenic | 50.0% | |
| AGAATTGCTGGGGAAGGAAC+AGG | - | Chr8:57767726-57767745 | None:intergenic | 50.0% | |
| AGATGTTGGAGTCGCGACTT+TGG | - | Chr8:57767052-57767071 | None:intergenic | 50.0% | |
| ATGTTGGAGTCGCGACTTTG+GGG | - | Chr8:57767050-57767069 | None:intergenic | 50.0% | |
| CGCACCAGACAAAGAAACAC+CGG | + | Chr8:57767656-57767675 | MsG0880045339.01.T03:CDS | 50.0% | |
| CGGCATAATCCAGACCAAAG+AGG | - | Chr8:57768066-57768085 | None:intergenic | 50.0% | |
| CGGTGTTTCTTTGTCTGGTG+CGG | - | Chr8:57767658-57767677 | None:intergenic | 50.0% | |
| GAAGCTGGTGGCAATGGTAA+TGG | - | Chr8:57767528-57767547 | None:intergenic | 50.0% | |
| GAAGTAGGAGAAGTTGCTGC+TGG | - | Chr8:57766337-57766356 | None:intergenic | 50.0% | |
| GAAGTTGCTACCACAGTAGG+TGG | - | Chr8:57766901-57766920 | None:intergenic | 50.0% | |
| GATGTTGGAGTCGCGACTTT+GGG | - | Chr8:57767051-57767070 | None:intergenic | 50.0% | |
| GGAGAAGTTGCTGCTACAAC+AGG | - | Chr8:57766331-57766350 | None:intergenic | 50.0% | |
| GGTGTTTCTTTGTCTGGTGC+GGG | - | Chr8:57767657-57767676 | None:intergenic | 50.0% | |
| GGTTTAGAAGCTGGTGGCAA+TGG | - | Chr8:57767534-57767553 | None:intergenic | 50.0% | |
| TGTGAAGTTGCCAGTCCCAA+AGG | + | Chr8:57767386-57767405 | MsG0880045339.01.T03:CDS | 50.0% | |
| TGTTGGCAACTTGGAAGGTG+CGG | - | Chr8:57766836-57766855 | None:intergenic | 50.0% | |
| TTCGTGGTTGGCAACTTCGA+TGG | - | Chr8:57766646-57766665 | None:intergenic | 50.0% | |
| TTGACAGGAGCAGTTGTTGG+AGG | - | Chr8:57767333-57767352 | None:intergenic | 50.0% | |
| TTGAGGCTAGAGGGTAGCAT+AGG | - | Chr8:57766234-57766253 | None:intergenic | 50.0% | |
| TTGGAACCTTTGCAGGTGCT+GGG | - | Chr8:57767569-57767588 | None:intergenic | 50.0% | |
| TTTCTCTTGTGCTTGTGGGG+TGG | - | Chr8:57767822-57767841 | None:intergenic | 50.0% | |
| ! | GATGATTTTGCAGCTGCAGG+CGG | - | Chr8:57766958-57766977 | None:intergenic | 50.0% |
| ! | GCTGTTGGAGTCGTAGCTTT+TGG | - | Chr8:57767096-57767115 | None:intergenic | 50.0% |
| ! | GGAGATGATTTTGCAGCTGC+AGG | - | Chr8:57766961-57766980 | None:intergenic | 50.0% |
| ! | GGTGGTTGAATTCTAGGGGA+TGG | - | Chr8:57767438-57767457 | None:intergenic | 50.0% |
| ! | GGTTCTGGTGCATCATCTTC+AGG | - | Chr8:57767798-57767817 | None:intergenic | 50.0% |
| ! | TGAAGGGTCCGATGGATTTG+TGG | - | Chr8:57766410-57766429 | None:intergenic | 50.0% |
| ! | TTTGGAACCTTTGCAGGTGC+TGG | - | Chr8:57767570-57767589 | None:intergenic | 50.0% |
| ! | TTTGGGACTGGCAACTTCAC+AGG | - | Chr8:57767387-57767406 | None:intergenic | 50.0% |
| !! | ACAGGAGAAGGTTTTGGTGC+GGG | - | Chr8:57767285-57767304 | None:intergenic | 50.0% |
| !! | CACAGGAGAAGGTTTTGGTG+CGG | - | Chr8:57767286-57767305 | None:intergenic | 50.0% |
| !! | GGTGCTGGTGTGTCTATTGT+AGG | - | Chr8:57767771-57767790 | None:intergenic | 50.0% |
| !! | GTGATGGTGGGAGAATTGCT+GGG | - | Chr8:57767737-57767756 | None:intergenic | 50.0% |
| !! | TGATGGTGGGAGAATTGCTG+GGG | - | Chr8:57767736-57767755 | None:intergenic | 50.0% |
| !! | TTCACAGGAGCGAGTTTTGG+AGG | - | Chr8:57767372-57767391 | None:intergenic | 50.0% |
| !!! | GCTTTTTTGGGTGGATGTGG+TGG | - | Chr8:57767459-57767478 | None:intergenic | 50.0% |
| !!! | GGAGTCGTAGCTTTTGGAAC+TGG | - | Chr8:57767090-57767109 | None:intergenic | 50.0% |
| !!! | GGGGTTTTGGGACTTAATGC+TGG | - | Chr8:57767417-57767436 | None:intergenic | 50.0% |
| !!! | GGTGCTTTTGGAACCTTTGC+AGG | - | Chr8:57767576-57767595 | None:intergenic | 50.0% |
| !!! | GGTGCTTTTTTGGGTGGATG+TGG | - | Chr8:57767462-57767481 | None:intergenic | 50.0% |
| !!! | TTTTTGGGTGGATGTGGTGG+TGG | - | Chr8:57767456-57767475 | None:intergenic | 50.0% |
| AGCTGCACCTGTGAAACCAC+TGG | + | Chr8:57767203-57767222 | MsG0880045339.01.T03:CDS | 55.0% | |
| AGCTGCCGTGACTGTGGTTA+TGG | - | Chr8:57766620-57766639 | None:intergenic | 55.0% | |
| CGAAGCTGCTGTTGGCAACT+TGG | - | Chr8:57766845-57766864 | None:intergenic | 55.0% | |
| GAAGTAGGAGAGGTTGCTGC+TGG | - | Chr8:57766751-57766770 | None:intergenic | 55.0% | |
| GAAGTTGGCGAAGCTGCTGT+TGG | - | Chr8:57766853-57766872 | None:intergenic | 55.0% | |
| GACTTCACAGGGGAAGATGC+TGG | - | Chr8:57767021-57767040 | None:intergenic | 55.0% | |
| GACTTCACGGGAGCAGATGT+TGG | - | Chr8:57767066-57767085 | None:intergenic | 55.0% | |
| GCAGGAGTTGCTGCCACAAT+AGG | - | Chr8:57766457-57766476 | None:intergenic | 55.0% | |
| GCTGCCGTGACTGTGGTTAT+GGG | - | Chr8:57766619-57766638 | None:intergenic | 55.0% | |
| GCTGCTGTTGGCAACTTGGA+AGG | - | Chr8:57766841-57766860 | None:intergenic | 55.0% | |
| GGGGAAGTTGCTACCACAGT+AGG | - | Chr8:57766904-57766923 | None:intergenic | 55.0% | |
| GGTGCATCATCTTCAGGTGC+TGG | - | Chr8:57767792-57767811 | None:intergenic | 55.0% | |
| GGTGCGGCAGGGATTATAGT+TGG | - | Chr8:57766820-57766839 | None:intergenic | 55.0% | |
| GGTTGCACCTGCAAAACCAC+TGG | + | Chr8:57767158-57767177 | MsG0880045339.01.T03:CDS | 55.0% | |
| GGTTTCACAGGAGAGGCTGT+TGG | - | Chr8:57767111-57767130 | None:intergenic | 55.0% | |
| GGTTTCACAGGTGCAGCTGT+TGG | - | Chr8:57767201-57767220 | None:intergenic | 55.0% | |
| TGGGGACAGGTGACTTCACA+GGG | - | Chr8:57767032-57767051 | None:intergenic | 55.0% | |
| TTGGGGACAGGTGACTTCAC+AGG | - | Chr8:57767033-57767052 | None:intergenic | 55.0% | |
| ! | ATCAGCTAGTGGTGGTGCTG+GGG | - | Chr8:57767937-57767956 | None:intergenic | 55.0% |
| ! | CATCAGCTAGTGGTGGTGCT+GGG | - | Chr8:57767938-57767957 | None:intergenic | 55.0% |
| ! | GGAAGGTGCAGATGGATTCG+TGG | - | Chr8:57766662-57766681 | None:intergenic | 55.0% |
| ! | GGCAATGTGGAAGGTGCAGA+TGG | - | Chr8:57766670-57766689 | None:intergenic | 55.0% |
| ! | GGGTCCGATGGATTTGTGGT+TGG | - | Chr8:57766406-57766425 | None:intergenic | 55.0% |
| ! | GGTGCAGATGGATTCGTGGT+TGG | - | Chr8:57766658-57766677 | None:intergenic | 55.0% |
| ! | GGTTTTGCAGGTGCAACCGT+TGG | - | Chr8:57767156-57767175 | None:intergenic | 55.0% |
| ! | GTGTTGGTGCAGGTGATGGT+GGG | - | Chr8:57767749-57767768 | None:intergenic | 55.0% |
| ! | TCATCAGCTAGTGGTGGTGC+TGG | - | Chr8:57767939-57767958 | None:intergenic | 55.0% |
| ! | TGGAACCTTTGCAGGTGCTG+GGG | - | Chr8:57767568-57767587 | None:intergenic | 55.0% |
| !! | GCTGGTGGCAATGGTAATGG+TGG | - | Chr8:57767525-57767544 | None:intergenic | 55.0% |
| !! | GCTGGTGTAACCTTTGGGAC+TGG | - | Chr8:57767399-57767418 | None:intergenic | 55.0% |
| !! | GGCTGCACTGTTTTGGGCAT+TGG | + | Chr8:57766198-57766217 | MsG0880045339.01.T03:CDS | 55.0% |
| !! | GGTGATGGTGGGAGAATTGC+TGG | - | Chr8:57767738-57767757 | None:intergenic | 55.0% |
| !! | GGTGCCGGTGTTTCTTTGTC+TGG | - | Chr8:57767663-57767682 | None:intergenic | 55.0% |
| !! | GGTTCCAAAAGCACCAGCAC+CGG | + | Chr8:57767581-57767600 | MsG0880045339.01.T03:CDS | 55.0% |
| !! | GGTTTTGGTGCGGGAGCTTT+TGG | - | Chr8:57767276-57767295 | None:intergenic | 55.0% |
| !! | GTAGGTGTTGGTGCAGGTGA+TGG | - | Chr8:57767753-57767772 | None:intergenic | 55.0% |
| !! | TCATCTTCAGGTGCTGGTGC+TGG | - | Chr8:57767786-57767805 | None:intergenic | 55.0% |
| !! | TGCTGGTGCTGGTGCTTCTT+TGG | - | Chr8:57767607-57767626 | None:intergenic | 55.0% |
| !! | TTGTGTGTAGGTGCTGGTGC+CGG | - | Chr8:57767618-57767637 | None:intergenic | 55.0% |
| !! | TTGTGTGTAGGTGCTGGTGC+TGG | - | Chr8:57767618-57767637 | None:intergenic | 55.0% |
| !!! | GGAGCGAGTTTTGGAGGATC+TGG | - | Chr8:57767366-57767385 | None:intergenic | 55.0% |
| ACCAGCACCCAGTCCTAGTG+CGG | + | Chr8:57767992-57768011 | MsG0880045339.01.T03:CDS | 60.0% | |
| CAAACCCACAGCCACGGTCA+CGG | + | Chr8:57766360-57766379 | MsG0880045339.01.T03:CDS | 60.0% | |
| CTCTTGTGCTTGTGGGGTGG+TGG | - | Chr8:57767819-57767838 | None:intergenic | 60.0% | |
| GCAGGAGTTGCCGCCACAAT+AGG | - | Chr8:57766502-57766521 | None:intergenic | 60.0% | |
| GCTGCTGAGATCGTGGTCGA+GGG | - | Chr8:57766781-57766800 | None:intergenic | 60.0% | |
| GGGGACAGGTGACTTCACAG+GGG | - | Chr8:57767031-57767050 | None:intergenic | 60.0% | |
| GGTATCCCCAGCACCTGCAA+AGG | + | Chr8:57767560-57767579 | MsG0880045339.01.T03:CDS | 60.0% | |
| GGTGGGAGAATTGCTGGGGA+AGG | - | Chr8:57767732-57767751 | None:intergenic | 60.0% | |
| GTAGGAGAGGTTGCTGCTGG+TGG | - | Chr8:57766748-57766767 | None:intergenic | 60.0% | |
| TCTTTGTCTGGTGCGGGTGC+TGG | - | Chr8:57767651-57767670 | None:intergenic | 60.0% | |
| TGCTGCTGAGATCGTGGTCG+AGG | - | Chr8:57766782-57766801 | None:intergenic | 60.0% | |
| ! | GCAACTTGGAAGGTGCGGCA+GGG | - | Chr8:57766831-57766850 | None:intergenic | 60.0% |
| ! | GGCAGTGTTGAAGGGTCCGA+TGG | - | Chr8:57766418-57766437 | None:intergenic | 60.0% |
| ! | GGTGCTGGGGATACCTTTGG+TGG | - | Chr8:57767555-57767574 | None:intergenic | 60.0% |
| ! | TCAGCTAGTGGTGGTGCTGG+GGG | - | Chr8:57767936-57767955 | None:intergenic | 60.0% |
| ! | TGCTTGTGGGGTGGTGGTTC+TGG | - | Chr8:57767813-57767832 | None:intergenic | 60.0% |
| !! | CTAGGACTGGGTGCTGGTGA+TGG | - | Chr8:57767990-57768009 | None:intergenic | 60.0% |
| !! | GCAGGTGCTGGGGATACCTT+TGG | - | Chr8:57767558-57767577 | None:intergenic | 60.0% |
| !! | GGTGCTGGTGCTTCTTTGGC+CGG | - | Chr8:57767603-57767622 | None:intergenic | 60.0% |
| !! | GGTGTTGGTGCAGGTGATGG+TGG | - | Chr8:57767750-57767769 | None:intergenic | 60.0% |
| !! | TGGTGCTGCTGCTGAGATCG+TGG | - | Chr8:57766788-57766807 | None:intergenic | 60.0% |
| !!! | GGTGCGGGAGCTTTTGGAAC+TGG | - | Chr8:57767270-57767289 | None:intergenic | 60.0% |
| !!! | TTGGCCGGTGCTGGTGCTTT+TGG | - | Chr8:57767588-57767607 | None:intergenic | 60.0% |
| ACCGCACTAGGACTGGGTGC+TGG | - | Chr8:57767996-57768015 | None:intergenic | 65.0% | |
| AGCTGCAGGCGGTTGAGTGG+TGG | - | Chr8:57766947-57766966 | None:intergenic | 65.0% | |
| GCAGGCGGTTGAGTGGTGGT+TGG | - | Chr8:57766943-57766962 | None:intergenic | 65.0% | |
| GGTGCTTCTTTGGCCGGTGC+TGG | - | Chr8:57767597-57767616 | None:intergenic | 65.0% | |
| TGCAGCTGCAGGCGGTTGAG+TGG | - | Chr8:57766950-57766969 | None:intergenic | 65.0% | |
| TGGTGCAGCTGCCGTGACTG+TGG | - | Chr8:57766626-57766645 | None:intergenic | 65.0% | |
| ! | GGAGTCGCGACTTTGGGGAC+AGG | - | Chr8:57767045-57767064 | None:intergenic | 65.0% |
| ! | GGCAACTTGGAAGGTGCGGC+AGG | - | Chr8:57766832-57766851 | None:intergenic | 65.0% |
| AGCTGCCGTGACCGTGGCTG+TGG | - | Chr8:57766368-57766387 | None:intergenic | 70.0% | |
| GCTGCCGTGACCGTGGCTGT+GGG | - | Chr8:57766367-57766386 | None:intergenic | 70.0% | |
| TGGTGCAGCTGCCGTGACCG+TGG | - | Chr8:57766374-57766393 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 57766196 | 57768480 | 57766196 | ID=MsG0880045339.01;Name=MsG0880045339.01 |
| Chr8 | mRNA | 57766196 | 57768480 | 57766196 | ID=MsG0880045339.01.T01;Parent=MsG0880045339.01;Name=MsG0880045339.01.T01;_AED=0.18;_eAED=0.18;_QI=0|0.2|0.16|1|0|0|6|214|473 |
| Chr8 | exon | 57766196 | 57766295 | 57766196 | ID=MsG0880045339.01.T01:exon:24593;Parent=MsG0880045339.01.T01 |
| Chr8 | exon | 57766377 | 57766442 | 57766377 | ID=MsG0880045339.01.T01:exon:24594;Parent=MsG0880045339.01.T01 |
| Chr8 | exon | 57766629 | 57766700 | 57766629 | ID=MsG0880045339.01.T01:exon:24595;Parent=MsG0880045339.01.T01 |
| Chr8 | exon | 57766797 | 57767543 | 57766797 | ID=MsG0880045339.01.T01:exon:24596;Parent=MsG0880045339.01.T01 |
| Chr8 | exon | 57767664 | 57768013 | 57767664 | ID=MsG0880045339.01.T01:exon:24597;Parent=MsG0880045339.01.T01 |
| Chr8 | CDS | 57766196 | 57766295 | 57766196 | ID=MsG0880045339.01.T01:cds;Parent=MsG0880045339.01.T01 |
| Chr8 | CDS | 57766377 | 57766442 | 57766377 | ID=MsG0880045339.01.T01:cds;Parent=MsG0880045339.01.T01 |
| Chr8 | CDS | 57766629 | 57766700 | 57766629 | ID=MsG0880045339.01.T01:cds;Parent=MsG0880045339.01.T01 |
| Chr8 | CDS | 57766797 | 57767543 | 57766797 | ID=MsG0880045339.01.T01:cds;Parent=MsG0880045339.01.T01 |
| Chr8 | CDS | 57767664 | 57768013 | 57767664 | ID=MsG0880045339.01.T01:cds;Parent=MsG0880045339.01.T01 |
| Chr8 | CDS | 57768180 | 57768266 | 57768180 | ID=MsG0880045339.01.T01:cds;Parent=MsG0880045339.01.T01 |
| Chr8 | three_prime_UTR | 57768267 | 57768480 | 57768267 | ID=MsG0880045339.01.T01:three_prime_utr;Parent=MsG0880045339.01.T01 |
| Chr8 | mRNA | 57766196 | 57768480 | 57766196 | ID=MsG0880045339.01.T02;Parent=MsG0880045339.01;Name=MsG0880045339.01.T02;_AED=0.11;_eAED=0.11;_QI=0|0.33|0.25|1|0|0|4|214|591 |
| Chr8 | exon | 57766196 | 57766419 | 57766196 | ID=MsG0880045339.01.T02:exon:24599;Parent=MsG0880045339.01.T02 |
| Chr8 | exon | 57766483 | 57767627 | 57766483 | ID=MsG0880045339.01.T02:exon:24600;Parent=MsG0880045339.01.T02 |
| Chr8 | exon | 57767694 | 57768013 | 57767694 | ID=MsG0880045339.01.T02:exon:24601;Parent=MsG0880045339.01.T02 |
| Chr8 | CDS | 57766196 | 57766419 | 57766196 | ID=MsG0880045339.01.T02:cds;Parent=MsG0880045339.01.T02 |
| Chr8 | CDS | 57766483 | 57767627 | 57766483 | ID=MsG0880045339.01.T02:cds;Parent=MsG0880045339.01.T02 |
| Chr8 | CDS | 57767694 | 57768013 | 57767694 | ID=MsG0880045339.01.T02:cds;Parent=MsG0880045339.01.T02 |
| Chr8 | CDS | 57768180 | 57768266 | 57768180 | ID=MsG0880045339.01.T02:cds;Parent=MsG0880045339.01.T02 |
| Chr8 | three_prime_UTR | 57768267 | 57768480 | 57768267 | ID=MsG0880045339.01.T02:three_prime_utr;Parent=MsG0880045339.01.T02 |
| Chr8 | mRNA | 57766196 | 57768480 | 57766196 | ID=MsG0880045339.01.T03;Parent=MsG0880045339.01;Name=MsG0880045339.01.T03;_AED=0.10;_eAED=0.10;_QI=0|0.5|0.33|1|0|0|3|214|619 |
| Chr8 | exon | 57766196 | 57766478 | 57766196 | ID=MsG0880045339.01.T03:exon:24602;Parent=MsG0880045339.01.T03 |
| Chr8 | exon | 57766524 | 57768013 | 57766524 | ID=MsG0880045339.01.T03:exon:24603;Parent=MsG0880045339.01.T03 |
| Chr8 | CDS | 57766196 | 57766478 | 57766196 | ID=MsG0880045339.01.T03:cds;Parent=MsG0880045339.01.T03 |
| Chr8 | CDS | 57766524 | 57768013 | 57766524 | ID=MsG0880045339.01.T03:cds;Parent=MsG0880045339.01.T03 |
| Chr8 | CDS | 57768180 | 57768266 | 57768180 | ID=MsG0880045339.01.T03:cds;Parent=MsG0880045339.01.T03 |
| Chr8 | three_prime_UTR | 57768267 | 57768480 | 57768267 | ID=MsG0880045339.01.T03:three_prime_utr;Parent=MsG0880045339.01.T03 |
| Chr8 | mRNA | 57766196 | 57768040 | 57766196 | ID=MsG0880045339.01.T04;Parent=MsG0880045339.01;Name=MsG0880045339.01.T04;_AED=0.16;_eAED=0.18;_QI=0|0|0|1|0|0|3|0|574 |
| Chr8 | exon | 57766196 | 57766487 | 57766196 | ID=MsG0880045339.01.T04:exon:24604;Parent=MsG0880045339.01.T04 |
| Chr8 | exon | 57766578 | 57766909 | 57766578 | ID=MsG0880045339.01.T04:exon:24605;Parent=MsG0880045339.01.T04 |
| Chr8 | exon | 57766940 | 57768040 | 57766940 | ID=MsG0880045339.01.T04:exon:24606;Parent=MsG0880045339.01.T04 |
| Chr8 | CDS | 57766196 | 57766487 | 57766196 | ID=MsG0880045339.01.T04:cds;Parent=MsG0880045339.01.T04 |
| Chr8 | CDS | 57766578 | 57766909 | 57766578 | ID=MsG0880045339.01.T04:cds;Parent=MsG0880045339.01.T04 |
| Chr8 | CDS | 57766940 | 57768040 | 57766940 | ID=MsG0880045339.01.T04:cds;Parent=MsG0880045339.01.T04 |
| Chr8 | mRNA | 57766196 | 57768040 | 57766196 | ID=MsG0880045339.01.T05;Parent=MsG0880045339.01;Name=MsG0880045339.01.T05;_AED=0.15;_eAED=0.17;_QI=0|0|0|1|0|0|2|0|595 |
| Chr8 | exon | 57766196 | 57766457 | 57766196 | ID=MsG0880045339.01.T05:exon:24607;Parent=MsG0880045339.01.T05 |
| Chr8 | exon | 57766515 | 57768040 | 57766515 | ID=MsG0880045339.01.T05:exon:24608;Parent=MsG0880045339.01.T05 |
| Chr8 | CDS | 57766196 | 57766457 | 57766196 | ID=MsG0880045339.01.T05:cds;Parent=MsG0880045339.01.T05 |
| Chr8 | CDS | 57766515 | 57768040 | 57766515 | ID=MsG0880045339.01.T05:cds;Parent=MsG0880045339.01.T05 |
| Gene Sequence |
| Protein sequence |
