AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280006418.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280006418.01.T01 MTR_2g008050 98.615 361 5 0 1 361 1 361 0.0 734
MsG0280006418.01.T01 MTR_6g004000 92.818 362 26 0 1 362 1 362 0.0 711
MsG0280006418.01.T01 MTR_2g096840 92.541 362 27 0 1 362 1 362 0.0 709
MsG0280006418.01.T01 MTR_7g026230 92.818 362 26 0 1 362 1 362 0.0 708
MsG0280006418.01.T01 MTR_3g095530 93.352 361 24 0 1 361 1 361 0.0 707
MsG0280006418.01.T01 MTR_0015s0130 92.818 362 26 0 1 362 1 362 0.0 707
MsG0280006418.01.T01 MTR_7g093260 91.713 362 30 0 1 362 1 362 0.0 702
MsG0280006418.01.T01 MTR_7g027185 44.507 355 184 2 10 351 7 361 2.76e-117 346
MsG0280006418.01.T01 MTR_7g027185 44.507 355 184 2 10 351 7 361 7.15e-117 346
MsG0280006418.01.T01 MTR_7g027185 47.557 307 159 1 10 314 7 313 1.76e-109 325
MsG0280006418.01.T01 MTR_8g464900 35.417 432 206 11 1 362 1 429 3.69e-81 256
MsG0280006418.01.T01 MTR_5g066400 35.550 436 207 12 1 365 1 433 1.03e-80 255
MsG0280006418.01.T01 MTR_8g089630 34.158 404 216 8 10 365 10 411 1.10e-70 229
MsG0280006418.01.T01 MTR_5g066400 32.874 435 192 12 1 365 1 405 5.69e-68 221
MsG0280006418.01.T01 MTR_5g066400 33.250 400 196 11 1 332 1 397 1.47e-65 215
MsG0280006418.01.T01 MTR_3g030550 36.261 353 201 9 7 351 1 337 1.53e-57 192
MsG0280006418.01.T01 MTR_2g445210 27.725 422 239 7 8 365 6 425 5.18e-53 183
MsG0280006418.01.T01 MTR_8g007440 33.969 262 150 5 77 319 9 266 2.50e-44 155
MsG0280006418.01.T01 MTR_2g445210 27.151 372 205 7 8 315 6 375 5.92e-43 154
MsG0280006418.01.T01 MTR_3g010170 30.824 279 171 7 91 354 179 450 1.14e-38 145
MsG0280006418.01.T01 MTR_8g070520 32.500 280 163 9 91 354 187 456 1.03e-35 137
MsG0280006418.01.T01 MTR_8g070520 31.655 278 164 9 91 352 187 454 1.20e-33 131
MsG0280006418.01.T01 MTR_3g067945 28.968 252 160 7 9 245 21 268 2.03e-22 100
MsG0280006418.01.T01 MTR_3g067945 35.965 114 70 2 250 360 586 699 5.68e-15 77.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280006418.01.T01 AT3G12110 93.094 362 25 0 1 362 1 362 0.0 709
MsG0280006418.01.T01 AT5G09810 93.370 362 24 0 1 362 1 362 0.0 706
MsG0280006418.01.T01 AT3G53750 90.884 362 33 0 1 362 1 362 0.0 698
MsG0280006418.01.T01 AT3G53750 90.884 362 33 0 1 362 1 362 0.0 698
MsG0280006418.01.T01 AT2G37620 90.884 362 33 0 1 362 1 362 0.0 698
MsG0280006418.01.T01 AT2G37620 90.884 362 33 0 1 362 1 362 0.0 698
MsG0280006418.01.T01 AT2G37620 90.884 362 33 0 1 362 1 362 0.0 698
MsG0280006418.01.T01 AT2G37620 90.884 362 33 0 1 362 1 362 0.0 698
MsG0280006418.01.T01 AT5G59370 90.884 362 33 0 1 362 1 362 0.0 696
MsG0280006418.01.T01 AT5G59370 90.884 362 33 0 1 362 1 362 0.0 696
MsG0280006418.01.T01 AT3G46520 90.608 362 34 0 1 362 1 362 0.0 694
MsG0280006418.01.T01 AT3G46520 90.608 362 34 0 1 362 1 362 0.0 694
MsG0280006418.01.T01 AT1G49240 88.674 362 41 0 1 362 1 362 0.0 689
MsG0280006418.01.T01 AT3G18780 88.398 362 42 0 1 362 1 362 0.0 688
MsG0280006418.01.T01 AT3G18780 88.398 362 42 0 1 362 1 362 0.0 688
MsG0280006418.01.T01 AT3G18780 89.636 357 37 0 1 357 1 357 0.0 688
MsG0280006418.01.T01 AT2G42100 82.720 353 61 0 10 362 11 363 0.0 637
MsG0280006418.01.T01 AT2G42090 68.802 359 107 1 7 365 1 354 0.0 536
MsG0280006418.01.T01 AT2G42170 76.250 320 73 1 46 365 1 317 0.0 525
MsG0280006418.01.T01 AT2G42170 76.250 320 73 1 46 365 1 317 0.0 525
MsG0280006418.01.T01 AT2G42170 77.564 312 67 1 46 357 1 309 0.0 523
MsG0280006418.01.T01 AT2G42170 77.564 312 67 1 46 357 1 309 0.0 523
MsG0280006418.01.T01 AT3G27000 45.070 355 182 2 10 351 7 361 1.21e-118 351
MsG0280006418.01.T01 AT2G42170 75.234 214 50 1 152 365 9 219 4.61e-117 341
MsG0280006418.01.T01 AT1G18450 35.880 432 207 8 1 365 1 429 2.74e-85 267
MsG0280006418.01.T01 AT1G13180 34.518 394 206 9 10 354 9 399 2.90e-71 230
MsG0280006418.01.T01 AT3G60830 36.827 353 199 9 7 351 1 337 5.52e-56 189
MsG0280006418.01.T01 AT3G33520 29.829 409 229 7 10 365 5 408 2.83e-54 186
MsG0280006418.01.T01 AT5G56180 31.786 280 166 8 91 354 50 320 9.62e-36 134
MsG0280006418.01.T01 AT5G56180 31.786 280 166 8 91 354 182 452 5.83e-35 135
MsG0280006418.01.T01 AT3G12380 29.183 257 159 6 9 245 21 274 6.24e-26 110
MsG0280006418.01.T01 AT3G12380 33.913 115 73 1 250 361 595 709 4.76e-14 74.7
MsG0280006418.01.T01 AT3G12380 29.020 255 156 6 9 245 21 268 2.41e-25 108
MsG0280006418.01.T01 AT3G12380 33.913 115 73 1 250 361 589 703 4.57e-14 74.7
MsG0280006418.01.T01 AT1G73910 35.862 145 74 3 1 129 1 142 8.57e-24 96.7
MsG0280006418.01.T01 AT1G73910 35.862 145 74 3 1 129 1 142 8.57e-24 96.7
MsG0280006418.01.T01 AT5G56180 32.178 202 114 7 91 281 182 371 6.69e-20 91.3
MsG0280006418.01.T01 AT1G73910 29.268 123 71 2 1 107 1 123 1.40e-12 65.9

Find 124 sgRNAs with CRISPR-Local

Find 266 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTTCCAGCCTTCTCTAAT+TGG 0.203357 2:-1696926 MsG0280006418.01.T01:CDS
TGAAAGTCTCAAACATAATC+TGG 0.264920 2:+1697836 None:intergenic
ATTCTTCGTTTGGATCTTGC+TGG 0.283771 2:-1697184 MsG0280006418.01.T01:CDS
AGAAGCACAGGGTGTTCTTC+TGG 0.289026 2:+1697904 None:intergenic
ACGAGGTCGCCCAATGATAC+TGG 0.294802 2:+1698101 None:intergenic
TCCCCATGCAATTCTTCGTT+TGG 0.297491 2:-1697194 MsG0280006418.01.T01:CDS
GTAGGTATTGTGCTTGATTC+TGG 0.298638 2:-1697262 MsG0280006418.01.T01:intron
CGAGGAGTGGGAAGTGTTAC+AGG 0.312663 2:+1698886 None:intergenic
AGCATGGTATAGTTAGTAAC+TGG 0.325644 2:-1697981 MsG0280006418.01.T01:CDS
GGAGGTTCTACTATGTTTCC+TGG 0.336897 2:-1696806 MsG0280006418.01.T01:CDS
AACCAAACTTGACTGAAATA+TGG 0.338167 2:+1696416 None:intergenic
AAGAGCATACCCTTCATATA+TGG 0.341233 2:+1697216 None:intergenic
TTGAAACGCACCTTGTTAGA+AGG 0.349336 2:+1698819 None:intergenic
CCATTTCTTGTTCAAAATCA+AGG 0.349898 2:+1697047 None:intergenic
GTGATGAAGCTCAGTCAAAA+AGG 0.356008 2:-1698032 MsG0280006418.01.T01:CDS
CATTGGTTAAGCAACCAAAT+TGG 0.363739 2:-1694676 None:intergenic
ACCCAACTCAGAAGCACTTT+CGG 0.364555 2:+1696478 None:intergenic
GCCGTGTTCCCCAGTATCAT+TGG 0.371777 2:-1698111 MsG0280006418.01.T01:CDS
CTGGATTGGTGGGTCTATCT+TGG 0.374688 2:-1696690 MsG0280006418.01.T01:CDS
GAAGGCTGGAAGAGTACTTC+GGG 0.376616 2:+1696935 None:intergenic
ATGTTTCTTCTTTAGGTCCT+TGG 0.378100 2:-1696313 MsG0280006418.01.T01:intron
CTAACTATACCATGCTCTAT+AGG 0.385023 2:+1697988 None:intergenic
AGTTAGTAACTGGGACGATA+TGG 0.387331 2:-1697971 MsG0280006418.01.T01:CDS
CTCATACGGTCAGCAATTCC+AGG 0.397451 2:+1696788 None:intergenic
TGAAGTGTGATGTTGATATT+AGG 0.398134 2:-1696859 MsG0280006418.01.T01:CDS
ACCGAAAGTGCTTCTGAGTT+GGG 0.400428 2:-1696479 MsG0280006418.01.T01:CDS
TTCTTCGTTTGGATCTTGCT+GGG 0.403209 2:-1697183 MsG0280006418.01.T01:CDS
AGAATTTGATCACAACTCAT+TGG 0.428205 2:+1696449 None:intergenic
GATATTAGGAAGGATCTATA+TGG 0.429892 2:-1696845 MsG0280006418.01.T01:CDS
GGGACGATATGGAAAAGATT+TGG 0.432591 2:-1697960 MsG0280006418.01.T01:CDS
TATGGAAATATTGTGCTTAG+TGG 0.440342 2:-1696827 MsG0280006418.01.T01:CDS
TTGCAGGTGATGATGCTCCT+AGG 0.440390 2:-1698134 MsG0280006418.01.T01:CDS
GTCATACCGGTGTAATGGTT+GGG 0.440783 2:-1698080 MsG0280006418.01.T01:CDS
CACCGAAAGTGCTTCTGAGT+TGG 0.441198 2:-1696480 MsG0280006418.01.T01:CDS
CTTGTCGTTGACAATGGAAC+TGG 0.444949 2:-1698286 MsG0280006418.01.T01:CDS
ATTGTTATGACCTGTCCATC+AGG 0.450057 2:+1696980 None:intergenic
TGGATTGCAACATACATTGC+AGG 0.450250 2:+1697808 None:intergenic
CTGAGAGGAAGTACAGTGTC+TGG 0.452337 2:-1696709 MsG0280006418.01.T01:CDS
GGAGCCTCGGTAAGAAGCAC+AGG 0.455052 2:+1697892 None:intergenic
TGCAATGTATGTTGCAATCC+AGG 0.457549 2:-1697806 MsG0280006418.01.T01:CDS
ATCACTCAGTACCTTTCAAC+AGG 0.460639 2:-1696666 MsG0280006418.01.T01:intron
GATGGACAGGTCATAACAAT+AGG 0.466277 2:-1696977 MsG0280006418.01.T01:CDS
CTACGAGTTGCCTGATGGAC+AGG 0.466607 2:-1696990 MsG0280006418.01.T01:CDS
CCGTGTTCCCCAGTATCATT+GGG 0.466998 2:-1698110 MsG0280006418.01.T01:CDS
CCAGCCTTCTCTAATTGGTA+TGG 0.471456 2:-1696921 MsG0280006418.01.T01:CDS
TACCGGTGTAATGGTTGGGA+TGG 0.474226 2:-1698076 MsG0280006418.01.T01:CDS
CACTGATTTCCTTGCTCATA+CGG 0.481431 2:+1696774 None:intergenic
CTATTGGCTTTAGGATTGAG+TGG 0.488468 2:+1697871 None:intergenic
CGAGGTCGCCCAATGATACT+GGG 0.492401 2:+1698102 None:intergenic
CTCCACGGCAGAGCTGCTCT+TGG 0.494017 2:+1697018 None:intergenic
AAGTACAGTGTCTGGATTGG+TGG 0.495328 2:-1696701 MsG0280006418.01.T01:CDS
TGGAGAAGCGAGCGAGGAGT+GGG 0.495732 2:+1698874 None:intergenic
CATTTCTTGTTCAAAATCAA+GGG 0.500283 2:+1697048 None:intergenic
GCGTGATTTAACAGAGTACT+TGG 0.505684 2:-1697161 MsG0280006418.01.T01:CDS
AGAGCATACCCTTCATATAT+GGG 0.507300 2:+1697217 None:intergenic
TTGGTTGCTTAACCAATGCC+CGG 0.509581 2:+1694681 None:intergenic
CAAACCTGTGGTACGTCCAC+TGG 0.513599 2:+1697765 None:intergenic
CAGACACTGTACTTCCTCTC+AGG 0.514199 2:+1696710 None:intergenic
ACCTCGTCATACCGGTGTAA+TGG 0.515976 2:-1698085 MsG0280006418.01.T01:CDS
CACACAGTGCCCATATATGA+AGG 0.517963 2:-1697226 MsG0280006418.01.T01:CDS
CGTCATACCGGTGTAATGGT+TGG 0.521275 2:-1698081 MsG0280006418.01.T01:CDS
CTTCAGTACCTCAGCTGAGA+AGG 0.523675 2:-1697110 MsG0280006418.01.T01:CDS
CTAATTGGTATGGAAGCTAC+TGG 0.524153 2:-1696911 MsG0280006418.01.T01:CDS
CAAAGAGAAACTAGCATATG+TGG 0.529444 2:-1697071 MsG0280006418.01.T01:CDS
CCCAATGATACTGGGGAACA+CGG 0.529959 2:+1698110 None:intergenic
CAACCTCTTGTCGTTGACAA+TGG 0.532453 2:-1698292 MsG0280006418.01.T01:CDS
GAAAGTCTCAAACATAATCT+GGG 0.537293 2:+1697837 None:intergenic
ATCCAAACGAAGAATTGCAT+GGG 0.537295 2:+1697192 None:intergenic
TGCAGGTGATGATGCTCCTA+GGG 0.537820 2:-1698133 MsG0280006418.01.T01:CDS
ATTGTGCTTGATTCTGGTGA+TGG 0.539615 2:-1697256 MsG0280006418.01.T01:CDS
CTTCTCAGCTGAGGTACTGA+AGG 0.541718 2:+1697111 None:intergenic
TGGTTGCTTAACCAATGCCC+GGG 0.542634 2:+1694682 None:intergenic
CCATACCAATTAGAGAAGGC+TGG 0.544939 2:+1696921 None:intergenic
ATAATGTTAACCAGTGCCCC+CGG 0.551483 2:-1694700 MsG0280006418.01.T01:CDS
TTTAGGATTGAGTGGAGCCT+CGG 0.559877 2:+1697879 None:intergenic
AGAAGGCTGGAAGAGTACTT+CGG 0.560097 2:+1696934 None:intergenic
TATGCCAGTGGACGTACCAC+AGG 0.563139 2:-1697769 MsG0280006418.01.T01:intron
GGTCAGAAGGATGCTTATGT+AGG 0.563553 2:-1698054 MsG0280006418.01.T01:CDS
AAGAGCTACGAGTTGCCTGA+TGG 0.564122 2:-1696995 MsG0280006418.01.T01:CDS
AATGGTTGGGATGGGTCAGA+AGG 0.565362 2:-1698067 MsG0280006418.01.T01:CDS
ATACTGGGGAACACGGCCCT+AGG 0.566767 2:+1698117 None:intergenic
GGAAATATTGTGCTTAGTGG+AGG 0.572013 2:-1696824 MsG0280006418.01.T01:CDS
ATCAACATCACACTTCATGA+TGG 0.572991 2:+1696865 None:intergenic
CATACAGAGATAAGACGGCC+TGG 0.574959 2:+1697788 None:intergenic
GATCCAAACGAAGAATTGCA+TGG 0.574973 2:+1697191 None:intergenic
CTAGTTTCTCTTTGACATCA+CGG 0.575209 2:+1697080 None:intergenic
ATTGGGCGACCTCGTCATAC+CGG 0.575640 2:-1698093 MsG0280006418.01.T01:CDS
TACCAAGAGCAGCTCTGCCG+TGG 0.577097 2:-1697020 MsG0280006418.01.T01:CDS
GTGGAGAAGCGAGCGAGGAG+TGG 0.580963 2:+1698873 None:intergenic
GGAAGAGTACTTCGGGGCAA+CGG 0.581700 2:+1696942 None:intergenic
AGTACAGTGTCTGGATTGGT+GGG 0.583080 2:-1696700 MsG0280006418.01.T01:CDS
ACCGGTGTAATGGTTGGGAT+GGG 0.584646 2:-1698075 MsG0280006418.01.T01:CDS
TCCAAGTAGCATGAAAATCA+AGG 0.588368 2:-1696744 MsG0280006418.01.T01:CDS
GTTCCATTGTCAACGACAAG+AGG 0.589221 2:+1698289 None:intergenic
GTCTTATCTCTGTATGCCAG+TGG 0.591211 2:-1697781 MsG0280006418.01.T01:CDS
GAACGGTGGAGAAGCGAGCG+AGG 0.591368 2:+1698868 None:intergenic
GTGAAAATTCTCACTGAGAG+AGG 0.601733 2:-1697139 MsG0280006418.01.T01:CDS
CAATGGAACTGGAATGGTCA+AGG 0.605491 2:-1698275 MsG0280006418.01.T01:intron
TTGAAGTATCCTATAGAGCA+TGG 0.607917 2:-1697997 MsG0280006418.01.T01:CDS
TTCGGGGCAACGGAATCTCT+CGG 0.608877 2:+1696952 None:intergenic
GACAATTTCCTTCTCAGCTG+AGG 0.611009 2:+1697102 None:intergenic
AGGAAGTACAGTGTCTGGAT+TGG 0.611355 2:-1696704 MsG0280006418.01.T01:CDS
GTGAGTTCATACCTGTTGAA+AGG 0.619084 2:+1696655 None:intergenic
AATTGCTGACCGTATGAGCA+AGG 0.626661 2:-1696783 MsG0280006418.01.T01:CDS
GCATGGTATAGTTAGTAACT+GGG 0.634959 2:-1697980 MsG0280006418.01.T01:CDS
GCTTCCATACCAATTAGAGA+AGG 0.635424 2:+1696917 None:intergenic
CGTTGACAATGGAACTGGAA+TGG 0.640256 2:-1698281 MsG0280006418.01.T01:CDS
GTGTGATGTTGATATTAGGA+AGG 0.640348 2:-1696855 MsG0280006418.01.T01:CDS
ACCCATCCCAACCATTACAC+CGG 0.641755 2:+1698074 None:intergenic
GGTTGCTTAACCAATGCCCG+GGG 0.651014 2:+1694683 None:intergenic
ACCATTACACCGGTATGACG+AGG 0.651416 2:+1698084 None:intergenic
ACTGGCATACAGAGATAAGA+CGG 0.654330 2:+1697783 None:intergenic
AGGTGGTTGCACCTCCTGAG+AGG 0.655646 2:-1696724 MsG0280006418.01.T01:CDS
CTATAGGATACTTCAATGTG+AGG 0.657321 2:+1698004 None:intergenic
ACACAGTGCCCATATATGAA+GGG 0.658479 2:-1697225 MsG0280006418.01.T01:CDS
ACACTGTACTTCCTCTCAGG+AGG 0.673323 2:+1696713 None:intergenic
ACACCCTGTGCTTCTTACCG+AGG 0.679352 2:-1697896 MsG0280006418.01.T01:CDS
AAGGCTGGAAGAGTACTTCG+GGG 0.692122 2:+1696936 None:intergenic
TCCAAACGAAGAATTGCATG+GGG 0.695056 2:+1697193 None:intergenic
GAGCCTCGGTAAGAAGCACA+GGG 0.711665 2:+1697893 None:intergenic
CAACTCGTAGCTCTTCTCCA+CGG 0.712406 2:+1697003 None:intergenic
GAGGTCGCCCAATGATACTG+GGG 0.722255 2:+1698103 None:intergenic
GTTGCTTAACCAATGCCCGG+GGG 0.722272 2:+1694684 None:intergenic
AAGTAGCATGAAAATCAAGG+TGG 0.729568 2:-1696741 MsG0280006418.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATCAAAAAAAAATAAAGTT+TGG + Chr2:1698148-1698167 None:intergenic 10.0%
!! TCTTTATTCAATTTATATAA+GGG - Chr2:1698106-1698125 MsG0280006418.01.T01:CDS 10.0%
!! TTCTTTATTCAATTTATATA+AGG - Chr2:1698105-1698124 MsG0280006418.01.T01:CDS 10.0%
!!! CTATCTTTTAAAAAATAAAT+AGG + Chr2:1697841-1697860 None:intergenic 10.0%
!! ACTAATGTATAAATACAAAT+AGG - Chr2:1698839-1698858 MsG0280006418.01.T01:five_prime_UTR 15.0%
!! ATTGGAAAAGAAAAAAAAAT+TGG + Chr2:1696951-1696970 None:intergenic 15.0%
!! TAGTAGTAAATTAATTAGTA+AGG - Chr2:1697689-1697708 MsG0280006418.01.T01:intron 15.0%
!! TATACATTAGTTAAAAAGTA+TGG + Chr2:1698830-1698849 None:intergenic 15.0%
!! TTAAAAAATAAATAGGAAGA+GGG + Chr2:1697834-1697853 None:intergenic 15.0%
!! TTTAAAAAATAAATAGGAAG+AGG + Chr2:1697835-1697854 None:intergenic 15.0%
!!! GAATTTTATAATGATTTCTT+AGG - Chr2:1696229-1696248 MsG0280006418.01.T01:intron 15.0%
!!! GTTGCATTTTTTTTTTTTTT+TGG - Chr2:1698202-1698221 MsG0280006418.01.T01:intron 15.0%
!!! TGAATATTCTTTTCTTTTTT+TGG + Chr2:1697925-1697944 None:intergenic 15.0%
!!! TTATTTATTTTATGCTTAGT+TGG - Chr2:1697450-1697469 MsG0280006418.01.T01:intron 15.0%
!!! TTGTGTTTAAAACATAAAAT+AGG - Chr2:1697651-1697670 MsG0280006418.01.T01:intron 15.0%
!! ACAAACAATTCTATATGTAT+TGG - Chr2:1696133-1696152 MsG0280006418.01.T01:intron 20.0%
!! AGTGAATAAAGTTGTTAAAA+AGG + Chr2:1698415-1698434 None:intergenic 20.0%
!! ATATATAATTTCGTGTTTGA+AGG - Chr2:1695149-1695168 MsG0280006418.01.T01:intron 20.0%
!! ATGTGAATTGGATATTATTA+GGG - Chr2:1697968-1697987 MsG0280006418.01.T01:CDS 20.0%
!! TTAACTTTCAAAATGTTACT+AGG - Chr2:1697753-1697772 MsG0280006418.01.T01:intron 20.0%
!! TTAGATGAAAAAATATATCC+AGG - Chr2:1698669-1698688 MsG0280006418.01.T01:intron 20.0%
!! TTGAAATTTATGATGTGAAT+TGG - Chr2:1697956-1697975 MsG0280006418.01.T01:CDS 20.0%
!! TTTCAACAAAATTAACAGAT+CGG + Chr2:1695088-1695107 None:intergenic 20.0%
!!! AATATATCTAGTTTAACGAA+TGG - Chr2:1697204-1697223 MsG0280006418.01.T01:CDS 20.0%
!!! AGGAGTTTTAAATTATAACT+AGG - Chr2:1698727-1698746 MsG0280006418.01.T01:intron 20.0%
!!! ATATAAGGCAATAAGTTTTT+TGG + Chr2:1697715-1697734 None:intergenic 20.0%
!!! ATATTTTGTGGCATTATTTA+AGG - Chr2:1698707-1698726 MsG0280006418.01.T01:intron 20.0%
!!! GTAACATTTTGAAAGTTAAA+AGG + Chr2:1697752-1697771 None:intergenic 20.0%
! AATCATTTCACTTTGATGTA+AGG - Chr2:1698273-1698292 MsG0280006418.01.T01:intron 25.0%
! AGAATCAAAAAATCAAATCC+AGG + Chr2:1694960-1694979 None:intergenic 25.0%
! ATGCTATATGTTTCTTCTTT+AGG - Chr2:1697242-1697261 MsG0280006418.01.T01:CDS 25.0%
! ATGTACATGTCTTTAAACTT+CGG - Chr2:1695958-1695977 MsG0280006418.01.T01:intron 25.0%
! CAAACTGCATATAAAATTTC+AGG + Chr2:1695998-1696017 None:intergenic 25.0%
! CATTTCTTGTTCAAAATCAA+GGG + Chr2:1696517-1696536 None:intergenic 25.0%
! CCTCATACAAATATAGATTA+AGG + Chr2:1697517-1697536 None:intergenic 25.0%
! CCTTAATCTATATTTGTATG+AGG - Chr2:1697514-1697533 MsG0280006418.01.T01:intron 25.0%
! GATGTGAATTGGATATTATT+AGG - Chr2:1697967-1697986 MsG0280006418.01.T01:CDS 25.0%
! TGCATAATAACAAATGTACA+AGG - Chr2:1696193-1696212 MsG0280006418.01.T01:intron 25.0%
! TGTGAATTGGATATTATTAG+GGG - Chr2:1697969-1697988 MsG0280006418.01.T01:CDS 25.0%
! TTCCTTCCAAAAACTATATT+TGG - Chr2:1698438-1698457 MsG0280006418.01.T01:intron 25.0%
! TTGAAGGAATTATGAAATCA+CGG - Chr2:1695165-1695184 MsG0280006418.01.T01:intron 25.0%
!! ATCCTATGACTTATATTTTG+TGG - Chr2:1698695-1698714 MsG0280006418.01.T01:intron 25.0%
!! CAATATTCACATTTTCCTAA+CGG + Chr2:1698182-1698201 None:intergenic 25.0%
!! TATGCTCCAAATATAGTTTT+TGG + Chr2:1698447-1698466 None:intergenic 25.0%
!! TTCTTTTCCAATTGTCATAA+TGG - Chr2:1696959-1696978 MsG0280006418.01.T01:CDS 25.0%
!!! ACGTTAGAATCTGATTTTTT+AGG - Chr2:1698596-1698615 MsG0280006418.01.T01:intron 25.0%
!!! ATTGGACATGTATTTTGAAA+CGG + Chr2:1698771-1698790 None:intergenic 25.0%
!!! ATTTTAAAGACTCTTAGCAT+TGG - Chr2:1698527-1698546 MsG0280006418.01.T01:intron 25.0%
!!! CGTTAGAATCTGATTTTTTA+GGG - Chr2:1698597-1698616 MsG0280006418.01.T01:intron 25.0%
!!! CTTTTATTTGTTTTTCATGC+TGG - Chr2:1697341-1697360 MsG0280006418.01.T01:intron 25.0%
!!! TGTACATTTGTTATTATGCA+AGG + Chr2:1696193-1696212 None:intergenic 25.0%
!!! TTCCATTTTTTTCATTAAGC+AGG + Chr2:1698641-1698660 None:intergenic 25.0%
!!! TTTTTTTTTGGAACTTTCAG+AGG - Chr2:1698214-1698233 MsG0280006418.01.T01:intron 25.0%
AACCAAACTTGACTGAAATA+TGG + Chr2:1697149-1697168 None:intergenic 30.0%
ACAAACAATTCAAACCATGA+AGG + Chr2:1696275-1696294 None:intergenic 30.0%
AGAATTTGATCACAACTCAT+TGG + Chr2:1697116-1697135 None:intergenic 30.0%
ATAGTGCACATTGCAAAAAT+TGG + Chr2:1698789-1698808 None:intergenic 30.0%
CACCTGCTTAATGAAAAAAA+TGG - Chr2:1698636-1698655 MsG0280006418.01.T01:intron 30.0%
CCAATTGCATAAAAATAGTC+TGG + Chr2:1697278-1697297 None:intergenic 30.0%
CCATTTCTTGTTCAAAATCA+AGG + Chr2:1696518-1696537 None:intergenic 30.0%
CGTTAGGAAAATGTGAATAT+TGG - Chr2:1698180-1698199 MsG0280006418.01.T01:intron 30.0%
CTATATTTGTATGAGGTGAT+GGG - Chr2:1697521-1697540 MsG0280006418.01.T01:intron 30.0%
GAAAGTCTCAAACATAATCT+GGG + Chr2:1695728-1695747 None:intergenic 30.0%
GACTTATTATTTGATGCTGT+GGG - Chr2:1697169-1697188 MsG0280006418.01.T01:CDS 30.0%
GATATTAGGAAGGATCTATA+TGG - Chr2:1696717-1696736 MsG0280006418.01.T01:CDS 30.0%
GCAACTTGAAATTCTATATG+CGG - Chr2:1696074-1696093 MsG0280006418.01.T01:intron 30.0%
TATAAGTCATAGGATATTCC+TGG + Chr2:1698690-1698709 None:intergenic 30.0%
TATGGAAATATTGTGCTTAG+TGG - Chr2:1696735-1696754 MsG0280006418.01.T01:CDS 30.0%
TCTATATTTGTATGAGGTGA+TGG - Chr2:1697520-1697539 MsG0280006418.01.T01:intron 30.0%
TGAAAGTCTCAAACATAATC+TGG + Chr2:1695729-1695748 None:intergenic 30.0%
TGAAGTGTGATGTTGATATT+AGG - Chr2:1696703-1696722 MsG0280006418.01.T01:CDS 30.0%
TGACTTATTATTTGATGCTG+TGG - Chr2:1697168-1697187 MsG0280006418.01.T01:CDS 30.0%
TGCCACAAAATATAAGTCAT+AGG + Chr2:1698700-1698719 None:intergenic 30.0%
TGTACAAGGATGATAATACA+TGG - Chr2:1696207-1696226 MsG0280006418.01.T01:intron 30.0%
TGTGATCATGTATCTTCAAT+TGG - Chr2:1695850-1695869 MsG0280006418.01.T01:intron 30.0%
TGTTTAATTCTATGCAGATG+TGG - Chr2:1697019-1697038 MsG0280006418.01.T01:CDS 30.0%
TTGAATTGTTTGTTCTACGT+AGG - Chr2:1696282-1696301 MsG0280006418.01.T01:CDS 30.0%
TTGTACATGTCTTGAAACTT+TGG - Chr2:1696041-1696060 MsG0280006418.01.T01:intron 30.0%
! AATGGAATGGACCATTTTAT+GGG - Chr2:1696977-1696996 MsG0280006418.01.T01:CDS 30.0%
! CCTTGATTTTGAACAAGAAA+TGG - Chr2:1696515-1696534 MsG0280006418.01.T01:intron 30.0%
! TAATGGAATGGACCATTTTA+TGG - Chr2:1696976-1696995 MsG0280006418.01.T01:CDS 30.0%
! TTCCAATTGTCATAATGGAA+TGG - Chr2:1696964-1696983 MsG0280006418.01.T01:CDS 30.0%
!! CTCCAAATATAGTTTTTGGA+AGG + Chr2:1698443-1698462 None:intergenic 30.0%
!! TTTTATGCTTAGTTGGTTTC+AGG - Chr2:1697457-1697476 MsG0280006418.01.T01:intron 30.0%
!!! ACTATTTTTATGCAATTGGC+GGG - Chr2:1697279-1697298 MsG0280006418.01.T01:intron 30.0%
!!! ATCTTTTCTCTATTGGCTTT+AGG + Chr2:1695703-1695722 None:intergenic 30.0%
!!! CATTTTTTTCATTAAGCAGG+TGG + Chr2:1698638-1698657 None:intergenic 30.0%
!!! CCAGACTATTTTTATGCAAT+TGG - Chr2:1697275-1697294 MsG0280006418.01.T01:intron 30.0%
!!! CGCTTTTTTAATCGTTTACT+TGG - Chr2:1694783-1694802 MsG0280006418.01.T01:intron 30.0%
!!! GACTATTTTTATGCAATTGG+CGG - Chr2:1697278-1697297 MsG0280006418.01.T01:intron 30.0%
!!! TACTTGGTCTTTTTTGTTTC+TGG - Chr2:1694799-1694818 MsG0280006418.01.T01:intron 30.0%
!!! TATGCATAGGTTTTGAAAGA+TGG - Chr2:1695230-1695249 MsG0280006418.01.T01:intron 30.0%
AAGTAGCATGAAAATCAAGG+TGG - Chr2:1696821-1696840 MsG0280006418.01.T01:CDS 35.0%
AGAGCATACCCTTCATATAT+GGG + Chr2:1696348-1696367 None:intergenic 35.0%
AGCAAATCAAACAACCCTAT+AGG + Chr2:1697547-1697566 None:intergenic 35.0%
AGCATGGTATAGTTAGTAAC+TGG - Chr2:1695581-1695600 MsG0280006418.01.T01:intron 35.0%
ATCAACATCACACTTCATGA+TGG + Chr2:1696700-1696719 None:intergenic 35.0%
ATCCAAACGAAGAATTGCAT+GGG + Chr2:1696373-1696392 None:intergenic 35.0%
ATGTTTCTTCTTTAGGTCCT+TGG - Chr2:1697249-1697268 MsG0280006418.01.T01:CDS 35.0%
CAAAGAGAAACTAGCATATG+TGG - Chr2:1696491-1696510 MsG0280006418.01.T01:CDS 35.0%
CAAGGGTGAATATGAAATCT+GGG - Chr2:1697047-1697066 MsG0280006418.01.T01:CDS 35.0%
CATCAACAAAAACAAACCTG+TGG + Chr2:1695812-1695831 None:intergenic 35.0%
CTAACTATACCATGCTCTAT+AGG + Chr2:1695577-1695596 None:intergenic 35.0%
CTAGTTTCTCTTTGACATCA+CGG + Chr2:1696485-1696504 None:intergenic 35.0%
CTATAGGATACTTCAATGTG+AGG + Chr2:1695561-1695580 None:intergenic 35.0%
GATTAGATGTCAAAACCGTT+AGG - Chr2:1698164-1698183 MsG0280006418.01.T01:intron 35.0%
GCATGGTATAGTTAGTAACT+GGG - Chr2:1695582-1695601 MsG0280006418.01.T01:intron 35.0%
GCCAAAACAGTGAAGATATA+AGG + Chr2:1697730-1697749 None:intergenic 35.0%
GTCCATTCCATTATGACAAT+TGG + Chr2:1696969-1696988 None:intergenic 35.0%
GTCTTTAAACTTCGGTTAAC+TGG - Chr2:1695966-1695985 MsG0280006418.01.T01:intron 35.0%
GTGTGATGTTGATATTAGGA+AGG - Chr2:1696707-1696726 MsG0280006418.01.T01:CDS 35.0%
GTTCTTTCTGTTGTATGCAT+AGG - Chr2:1695217-1695236 MsG0280006418.01.T01:intron 35.0%
GTTTGAATCATTTCACTCGT+TGG - Chr2:1698361-1698380 MsG0280006418.01.T01:intron 35.0%
TCCAAGTAGCATGAAAATCA+AGG - Chr2:1696818-1696837 MsG0280006418.01.T01:CDS 35.0%
TGAACTTTGTAGGTTCTGTT+TGG - Chr2:1697309-1697328 MsG0280006418.01.T01:intron 35.0%
TGATGAAGCTCAGTCAAAAA+GGG - Chr2:1695531-1695550 MsG0280006418.01.T01:intron 35.0%
TGCCATATTTCAGTCAAGTT+TGG - Chr2:1697144-1697163 MsG0280006418.01.T01:CDS 35.0%
TGTGTAATAATGCTGTGAGT+TGG - Chr2:1695892-1695911 MsG0280006418.01.T01:intron 35.0%
TTCATGCTGGTCATGAATTT+AGG - Chr2:1697354-1697373 MsG0280006418.01.T01:intron 35.0%
! AAGAGCATACCCTTCATATA+TGG + Chr2:1696349-1696368 None:intergenic 35.0%
! ACCATTTTATGGGATTCATG+GGG - Chr2:1696987-1697006 MsG0280006418.01.T01:CDS 35.0%
! ACCTTGATTTTCATGCTACT+TGG + Chr2:1696822-1696841 None:intergenic 35.0%
! ATATCTATTTCTCCCAGACA+GGG - Chr2:1697409-1697428 MsG0280006418.01.T01:intron 35.0%
! CTCTAAAGACTAATCACACA+AGG - Chr2:1697995-1698014 MsG0280006418.01.T01:CDS 35.0%
! GACCATTTTATGGGATTCAT+GGG - Chr2:1696986-1697005 MsG0280006418.01.T01:CDS 35.0%
! GCCTTATATCTTCACTGTTT+TGG - Chr2:1697726-1697745 MsG0280006418.01.T01:intron 35.0%
! TAAAAATAGTCTGGCTTCCA+AGG + Chr2:1697269-1697288 None:intergenic 35.0%
! TTGAAGTATCCTATAGAGCA+TGG - Chr2:1695565-1695584 MsG0280006418.01.T01:intron 35.0%
! TTGTAACGCTATTTCCTTCA+TGG - Chr2:1696258-1696277 MsG0280006418.01.T01:intron 35.0%
!! TGTTAGAAGGAAAAAGCGTT+AGG + Chr2:1694733-1694752 None:intergenic 35.0%
!!! AACGCTTTTTCCTTCTAACA+AGG - Chr2:1694733-1694752 MsG0280006418.01.T01:intron 35.0%
!!! GACATGTATTTTGAAACGGA+TGG + Chr2:1698767-1698786 None:intergenic 35.0%
!!! GGTCTTTTTTGTTTCTGGAT+CGG - Chr2:1694804-1694823 MsG0280006418.01.T01:intron 35.0%
ACACAGTGCCCATATATGAA+GGG - Chr2:1696337-1696356 MsG0280006418.01.T01:intron 40.0%
ACCCCATGAATCCCATAAAA+TGG + Chr2:1696991-1697010 None:intergenic 40.0%
ACTGGCATACAGAGATAAGA+CGG + Chr2:1695782-1695801 None:intergenic 40.0%
AGTTAGTAACTGGGACGATA+TGG - Chr2:1695591-1695610 MsG0280006418.01.T01:intron 40.0%
ATCACTCAGTACCTTTCAAC+AGG - Chr2:1696896-1696915 MsG0280006418.01.T01:CDS 40.0%
ATGACTCAAAATTCCCTGTC+TGG + Chr2:1697425-1697444 None:intergenic 40.0%
ATTCTTCGTTTGGATCTTGC+TGG - Chr2:1696378-1696397 MsG0280006418.01.T01:intron 40.0%
ATTGTGCTTGATTCTGGTGA+TGG - Chr2:1696306-1696325 MsG0280006418.01.T01:intron 40.0%
ATTGTTATGACCTGTCCATC+AGG + Chr2:1696585-1696604 None:intergenic 40.0%
CCAAGGGTGAATATGAAATC+TGG - Chr2:1697046-1697065 MsG0280006418.01.T01:CDS 40.0%
CCAGATTTCATATTCACCCT+TGG + Chr2:1697049-1697068 None:intergenic 40.0%
CTAATTGGTATGGAAGCTAC+TGG - Chr2:1696651-1696670 MsG0280006418.01.T01:intron 40.0%
CTTGTACTATGTTTGCTTGC+AGG - Chr2:1695399-1695418 MsG0280006418.01.T01:intron 40.0%
GAATTTAGGTGCCTCTAGTT+AGG - Chr2:1697368-1697387 MsG0280006418.01.T01:intron 40.0%
GAGTGAATTGTTTCACACTG+AGG - Chr2:1698246-1698265 MsG0280006418.01.T01:intron 40.0%
GATCCAAACGAAGAATTGCA+TGG + Chr2:1696374-1696393 None:intergenic 40.0%
GATCGGAAACATGCATATGA+AGG + Chr2:1695071-1695090 None:intergenic 40.0%
GATGAAGCTCAGTCAAAAAG+GGG - Chr2:1695532-1695551 MsG0280006418.01.T01:intron 40.0%
GATGGACAGGTCATAACAAT+AGG - Chr2:1696585-1696604 MsG0280006418.01.T01:intron 40.0%
GCTTCCATACCAATTAGAGA+AGG + Chr2:1696648-1696667 None:intergenic 40.0%
GGAAATATTGTGCTTAGTGG+AGG - Chr2:1696738-1696757 MsG0280006418.01.T01:CDS 40.0%
GGGACGATATGGAAAAGATT+TGG - Chr2:1695602-1695621 MsG0280006418.01.T01:intron 40.0%
GTCTTGAAACTTTGGTTAGC+TGG - Chr2:1696049-1696068 MsG0280006418.01.T01:intron 40.0%
GTGAAAATTCTCACTGAGAG+AGG - Chr2:1696423-1696442 MsG0280006418.01.T01:intron 40.0%
GTGAGTTCATACCTGTTGAA+AGG + Chr2:1696910-1696929 None:intergenic 40.0%
GTGATGAAGCTCAGTCAAAA+AGG - Chr2:1695530-1695549 MsG0280006418.01.T01:intron 40.0%
TCCAAACGAAGAATTGCATG+GGG + Chr2:1696372-1696391 None:intergenic 40.0%
TGACTCAAAATTCCCTGTCT+GGG + Chr2:1697424-1697443 None:intergenic 40.0%
TGCAATGTATGTTGCAATCC+AGG - Chr2:1695756-1695775 MsG0280006418.01.T01:intron 40.0%
TGGATTGCAACATACATTGC+AGG + Chr2:1695757-1695776 None:intergenic 40.0%
TTCTTCGTTTGGATCTTGCT+GGG - Chr2:1696379-1696398 MsG0280006418.01.T01:intron 40.0%
TTGAAACGCACCTTGTTAGA+AGG + Chr2:1694746-1694765 None:intergenic 40.0%
! AAGAGTTTTGCTCATGATCG+CGG + Chr2:1698030-1698049 None:intergenic 40.0%
! CATATCTATTTCTCCCAGAC+AGG - Chr2:1697408-1697427 MsG0280006418.01.T01:intron 40.0%
! CTGGGTCATCTTTTCTCTAT+TGG + Chr2:1695710-1695729 None:intergenic 40.0%
! GCGTGATTTAACAGAGTACT+TGG - Chr2:1696401-1696420 MsG0280006418.01.T01:intron 40.0%
! GGACCATTTTATGGGATTCA+TGG - Chr2:1696985-1697004 MsG0280006418.01.T01:CDS 40.0%
! GGGATGGTATTGAACTTTGT+AGG - Chr2:1697299-1697318 MsG0280006418.01.T01:intron 40.0%
! GTAGGTATTGTGCTTGATTC+TGG - Chr2:1696300-1696319 MsG0280006418.01.T01:CDS 40.0%
! TTTTTATGCAATTGGCGGGA+TGG - Chr2:1697283-1697302 MsG0280006418.01.T01:intron 40.0%
!! AAAGCGTTAGGATTTTGCAG+CGG + Chr2:1694721-1694740 None:intergenic 40.0%
!! CACTGATTTCCTTGCTCATA+CGG + Chr2:1696791-1696810 None:intergenic 40.0%
!! CTATTGGCTTTAGGATTGAG+TGG + Chr2:1695694-1695713 None:intergenic 40.0%
AATTGCTGACCGTATGAGCA+AGG - Chr2:1696779-1696798 MsG0280006418.01.T01:CDS 45.0%
ATAATGTTAACCAGTGCCCC+CGG - Chr2:1698862-1698881 MsG0280006418.01.T01:five_prime_UTR 45.0%
ATGCAGATGTGGATCTCCAA+GGG - Chr2:1697030-1697049 MsG0280006418.01.T01:CDS 45.0%
CAACCTCTTGTCGTTGACAA+TGG - Chr2:1695270-1695289 MsG0280006418.01.T01:intron 45.0%
CAATGGAACTGGAATGGTCA+AGG - Chr2:1695287-1695306 MsG0280006418.01.T01:intron 45.0%
CACACAGTGCCCATATATGA+AGG - Chr2:1696336-1696355 MsG0280006418.01.T01:intron 45.0%
CACTTTCGGTGAACAATAGC+TGG + Chr2:1697073-1697092 None:intergenic 45.0%
CCAGCCTTCTCTAATTGGTA+TGG - Chr2:1696641-1696660 MsG0280006418.01.T01:intron 45.0%
CCATACCAATTAGAGAAGGC+TGG + Chr2:1696644-1696663 None:intergenic 45.0%
CGTTGACAATGGAACTGGAA+TGG - Chr2:1695281-1695300 MsG0280006418.01.T01:intron 45.0%
CTCTTCCAGCCTTCTCTAAT+TGG - Chr2:1696636-1696655 MsG0280006418.01.T01:intron 45.0%
CTTGTCGTTGACAATGGAAC+TGG - Chr2:1695276-1695295 MsG0280006418.01.T01:intron 45.0%
GACAATTTCCTTCTCAGCTG+AGG + Chr2:1696463-1696482 None:intergenic 45.0%
GGAGGTTCTACTATGTTTCC+TGG - Chr2:1696756-1696775 MsG0280006418.01.T01:CDS 45.0%
GGTCAGAAGGATGCTTATGT+AGG - Chr2:1695508-1695527 MsG0280006418.01.T01:intron 45.0%
GTCATACCGGTGTAATGGTT+GGG - Chr2:1695482-1695501 MsG0280006418.01.T01:intron 45.0%
GTCTTATCTCTGTATGCCAG+TGG - Chr2:1695781-1695800 MsG0280006418.01.T01:intron 45.0%
GTTCCATTGTCAACGACAAG+AGG + Chr2:1695276-1695295 None:intergenic 45.0%
TACTATGTTTGCTTGCAGGC+TGG - Chr2:1695403-1695422 MsG0280006418.01.T01:intron 45.0%
TATGCAGATGTGGATCTCCA+AGG - Chr2:1697029-1697048 MsG0280006418.01.T01:CDS 45.0%
TCCCCATGCAATTCTTCGTT+TGG - Chr2:1696368-1696387 MsG0280006418.01.T01:intron 45.0%
TTGGTTGCTTAACCAATGCC+CGG + Chr2:1698884-1698903 None:intergenic 45.0%
TTTAGGTGCCTCTAGTTAGG+AGG - Chr2:1697371-1697390 MsG0280006418.01.T01:intron 45.0%
! AAGTACAGTGTCTGGATTGG+TGG - Chr2:1696861-1696880 MsG0280006418.01.T01:CDS 45.0%
! AGGAAGTACAGTGTCTGGAT+TGG - Chr2:1696858-1696877 MsG0280006418.01.T01:CDS 45.0%
! TAGGATTTTGCAGCGGAGAA+CGG + Chr2:1694714-1694733 None:intergenic 45.0%
! TTTAGGATTGAGTGGAGCCT+CGG + Chr2:1695686-1695705 None:intergenic 45.0%
!! ACCCAACTCAGAAGCACTTT+CGG + Chr2:1697087-1697106 None:intergenic 45.0%
!! ACCGAAAGTGCTTCTGAGTT+GGG - Chr2:1697083-1697102 MsG0280006418.01.T01:CDS 45.0%
!! AGAAGGCTGGAAGAGTACTT+CGG + Chr2:1696631-1696650 None:intergenic 45.0%
!! AGTACAGTGTCTGGATTGGT+GGG - Chr2:1696862-1696881 MsG0280006418.01.T01:CDS 45.0%
!! TATGAGGTGATGGGCCTATA+GGG - Chr2:1697530-1697549 MsG0280006418.01.T01:intron 45.0%
!!! AAGCTGCTTTTTGATGCACC+TGG - Chr2:1694939-1694958 MsG0280006418.01.T01:intron 45.0%
AAGAGCTACGAGTTGCCTGA+TGG - Chr2:1696567-1696586 MsG0280006418.01.T01:intron 50.0%
AATGGTTGGGATGGGTCAGA+AGG - Chr2:1695495-1695514 MsG0280006418.01.T01:intron 50.0%
ACACTGTACTTCCTCTCAGG+AGG + Chr2:1696852-1696871 None:intergenic 50.0%
ACCATTACACCGGTATGACG+AGG + Chr2:1695481-1695500 None:intergenic 50.0%
ACCCATCCCAACCATTACAC+CGG + Chr2:1695491-1695510 None:intergenic 50.0%
ACCGGTGTAATGGTTGGGAT+GGG - Chr2:1695487-1695506 MsG0280006418.01.T01:intron 50.0%
ACCTCGTCATACCGGTGTAA+TGG - Chr2:1695477-1695496 MsG0280006418.01.T01:intron 50.0%
CAACTCGTAGCTCTTCTCCA+CGG + Chr2:1696562-1696581 None:intergenic 50.0%
CAGACACTGTACTTCCTCTC+AGG + Chr2:1696855-1696874 None:intergenic 50.0%
CATACAGAGATAAGACGGCC+TGG + Chr2:1695777-1695796 None:intergenic 50.0%
CCCAATGATACTGGGGAACA+CGG + Chr2:1695455-1695474 None:intergenic 50.0%
CCGTGTTCCCCAGTATCATT+GGG - Chr2:1695452-1695471 MsG0280006418.01.T01:intron 50.0%
CGTCATACCGGTGTAATGGT+TGG - Chr2:1695481-1695500 MsG0280006418.01.T01:intron 50.0%
CTCATACGGTCAGCAATTCC+AGG + Chr2:1696777-1696796 None:intergenic 50.0%
CTTCAGTACCTCAGCTGAGA+AGG - Chr2:1696452-1696471 MsG0280006418.01.T01:CDS 50.0%
TAATGTTAACCAGTGCCCCC+GGG - Chr2:1698863-1698882 MsG0280006418.01.T01:five_prime_UTR 50.0%
TACCGGTGTAATGGTTGGGA+TGG - Chr2:1695486-1695505 MsG0280006418.01.T01:intron 50.0%
TGGTTGCTTAACCAATGCCC+GGG + Chr2:1698883-1698902 None:intergenic 50.0%
! AGAAGCACAGGGTGTTCTTC+TGG + Chr2:1695661-1695680 None:intergenic 50.0%
! CTGAGAGGAAGTACAGTGTC+TGG - Chr2:1696853-1696872 MsG0280006418.01.T01:CDS 50.0%
! TGCAGGTGATGATGCTCCTA+GGG - Chr2:1695429-1695448 MsG0280006418.01.T01:intron 50.0%
! TTGCAGGTGATGATGCTCCT+AGG - Chr2:1695428-1695447 MsG0280006418.01.T01:intron 50.0%
!! AAGGCTGGAAGAGTACTTCG+GGG + Chr2:1696629-1696648 None:intergenic 50.0%
!! CACCGAAAGTGCTTCTGAGT+TGG - Chr2:1697082-1697101 MsG0280006418.01.T01:CDS 50.0%
!! CTGGATTGGTGGGTCTATCT+TGG - Chr2:1696872-1696891 MsG0280006418.01.T01:CDS 50.0%
!! CTTCTCAGCTGAGGTACTGA+AGG + Chr2:1696454-1696473 None:intergenic 50.0%
!! GAAGGCTGGAAGAGTACTTC+GGG + Chr2:1696630-1696649 None:intergenic 50.0%
!! GTATGAGGTGATGGGCCTAT+AGG - Chr2:1697529-1697548 MsG0280006418.01.T01:intron 50.0%
ACACCCTGTGCTTCTTACCG+AGG - Chr2:1695666-1695685 MsG0280006418.01.T01:intron 55.0%
ACGAGGTCGCCCAATGATAC+TGG + Chr2:1695464-1695483 None:intergenic 55.0%
AGGTGCCTCTAGTTAGGAGG+AGG - Chr2:1697374-1697393 MsG0280006418.01.T01:intron 55.0%
ATTGGGCGACCTCGTCATAC+CGG - Chr2:1695469-1695488 MsG0280006418.01.T01:intron 55.0%
CAAACCTGTGGTACGTCCAC+TGG + Chr2:1695800-1695819 None:intergenic 55.0%
CGAGGTCGCCCAATGATACT+GGG + Chr2:1695463-1695482 None:intergenic 55.0%
CTCACCCTCCTCCTAACTAG+AGG + Chr2:1697382-1697401 None:intergenic 55.0%
GAGGTCGCCCAATGATACTG+GGG + Chr2:1695462-1695481 None:intergenic 55.0%
GCCGTGTTCCCCAGTATCAT+TGG - Chr2:1695451-1695470 MsG0280006418.01.T01:intron 55.0%
GGTGCCTCTAGTTAGGAGGA+GGG - Chr2:1697375-1697394 MsG0280006418.01.T01:intron 55.0%
GGTTGCTTAACCAATGCCCG+GGG + Chr2:1698882-1698901 None:intergenic 55.0%
GTTGCTTAACCAATGCCCGG+GGG + Chr2:1698881-1698900 None:intergenic 55.0%
TATGCCAGTGGACGTACCAC+AGG - Chr2:1695793-1695812 MsG0280006418.01.T01:intron 55.0%
TTCGGGGCAACGGAATCTCT+CGG + Chr2:1696613-1696632 None:intergenic 55.0%
! CTACGAGTTGCCTGATGGAC+AGG - Chr2:1696572-1696591 MsG0280006418.01.T01:intron 55.0%
! GAGCCTCGGTAAGAAGCACA+GGG + Chr2:1695672-1695691 None:intergenic 55.0%
! GATTTTGCAGCGGAGAACGG+TGG + Chr2:1694711-1694730 None:intergenic 55.0%
!! GGAAGAGTACTTCGGGGCAA+CGG + Chr2:1696623-1696642 None:intergenic 55.0%
!!! TGCTTGCAGGCTGGTTTTGC+AGG - Chr2:1695412-1695431 MsG0280006418.01.T01:intron 55.0%
AGGTGGTTGCACCTCCTGAG+AGG - Chr2:1696838-1696857 MsG0280006418.01.T01:CDS 60.0%
ATACTGGGGAACACGGCCCT+AGG + Chr2:1695448-1695467 None:intergenic 60.0%
TACCAAGAGCAGCTCTGCCG+TGG - Chr2:1696542-1696561 MsG0280006418.01.T01:intron 60.0%
TGGAGAAGCGAGCGAGGAGT+GGG + Chr2:1694691-1694710 None:intergenic 60.0%
! GGAGCCTCGGTAAGAAGCAC+AGG + Chr2:1695673-1695692 None:intergenic 60.0%
CTCCACGGCAGAGCTGCTCT+TGG + Chr2:1696547-1696566 None:intergenic 65.0%
GAACGGTGGAGAAGCGAGCG+AGG + Chr2:1694697-1694716 None:intergenic 65.0%
GTGGAGAAGCGAGCGAGGAG+TGG + Chr2:1694692-1694711 None:intergenic 65.0%
TAACCAGTGCCCCCGGGCAT+TGG - Chr2:1698869-1698888 MsG0280006418.01.T01:five_prime_UTR 65.0%
! TAACCAATGCCCGGGGGCAC+TGG + Chr2:1698875-1698894 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr2 gene 1694679 1698905 1694679 ID=MsG0280006418.01;Name=MsG0280006418.01
Chr2 mRNA 1694679 1698905 1694679 ID=MsG0280006418.01.T01;Parent=MsG0280006418.01;Name=MsG0280006418.01.T01;_AED=0.49;_eAED=0.55;_QI=86|0.5|0.57|1|0.83|0.57|7|0|412
Chr2 exon 1694679 1694723 1694679 ID=MsG0280006418.01.T01:exon:254;Parent=MsG0280006418.01.T01
Chr2 exon 1696280 1696320 1696280 ID=MsG0280006418.01.T01:exon:253;Parent=MsG0280006418.01.T01
Chr2 exon 1696429 1696510 1696429 ID=MsG0280006418.01.T01:exon:252;Parent=MsG0280006418.01.T01
Chr2 exon 1696667 1697280 1696667 ID=MsG0280006418.01.T01:exon:251;Parent=MsG0280006418.01.T01
Chr2 exon 1697770 1698163 1697770 ID=MsG0280006418.01.T01:exon:250;Parent=MsG0280006418.01.T01
Chr2 exon 1698276 1698345 1698276 ID=MsG0280006418.01.T01:exon:249;Parent=MsG0280006418.01.T01
Chr2 exon 1698830 1698905 1698830 ID=MsG0280006418.01.T01:exon:248;Parent=MsG0280006418.01.T01
Chr2 five_prime_UTR 1698830 1698905 1698830 ID=MsG0280006418.01.T01:five_prime_utr;Parent=MsG0280006418.01.T01
Chr2 five_prime_UTR 1698336 1698345 1698336 ID=MsG0280006418.01.T01:five_prime_utr;Parent=MsG0280006418.01.T01
Chr2 CDS 1698276 1698335 1698276 ID=MsG0280006418.01.T01:cds;Parent=MsG0280006418.01.T01
Chr2 CDS 1697770 1698163 1697770 ID=MsG0280006418.01.T01:cds;Parent=MsG0280006418.01.T01
Chr2 CDS 1696667 1697280 1696667 ID=MsG0280006418.01.T01:cds;Parent=MsG0280006418.01.T01
Chr2 CDS 1696429 1696510 1696429 ID=MsG0280006418.01.T01:cds;Parent=MsG0280006418.01.T01
Chr2 CDS 1696280 1696320 1696280 ID=MsG0280006418.01.T01:cds;Parent=MsG0280006418.01.T01
Chr2 CDS 1694679 1694723 1694679 ID=MsG0280006418.01.T01:cds;Parent=MsG0280006418.01.T01
Gene Sequence

>MsG0280006418.01.T01

ATGGCTGATGCTGAAGACATTCAACCTCTTGTCGTTGACAATGGAACTGGAATGGTCAAGGCTGGTTTTGCAGGTGATGATGCTCCTAGGGCCGTGTTCCCCAGTATCATTGGGCGACCTCGTCATACCGGTGTAATGGTTGGGATGGGTCAGAAGGATGCTTATGTAGGTGATGAAGCTCAGTCAAAAAGGGGTATCCTCACATTGAAGTATCCTATAGAGCATGGTATAGTTAGTAACTGGGACGATATGGAAAAGATTTGGCATCACACATTTTACAATGAGCTTCGTGTTGCTCCAGAAGAACACCCTGTGCTTCTTACCGAGGCTCCACTCAATCCTAAAGCCAATAGAGAAAAGATGACCCAGATTATGTTTGAGACTTTCAATGTGCCTGCAATGTATGTTGCAATCCAGGCCGTCTTATCTCTGTATGCCAGTGGACGTACCACAGGTATTGTGCTTGATTCTGGTGATGGTGTGAGTCACACAGTGCCCATATATGAAGGGTATGCTCTTCCCCATGCAATTCTTCGTTTGGATCTTGCTGGGCGTGATTTAACAGAGTACTTGGTGAAAATTCTCACTGAGAGAGGATACTCCTTCAGTACCTCAGCTGAGAAGGAAATTGTCCGTGATGTCAAAGAGAAACTAGCATATGTGGCCCTTGATTTTGAACAAGAAATGGAGACTACCAAGAGCAGCTCTGCCGTGGAGAAGAGCTACGAGTTGCCTGATGGACAGGTCATAACAATAGGTTCCGAGAGATTCCGTTGCCCCGAAGTACTCTTCCAGCCTTCTCTAATTGGTATGGAAGCTACTGGAATTCATGAAACTACATACAACTCCATCATGAAGTGTGATGTTGATATTAGGAAGGATCTATATGGAAATATTGTGCTTAGTGGAGGTTCTACTATGTTTCCTGGAATTGCTGACCGTATGAGCAAGGAAATCAGTGCTCTTGCTCCAAGTAGCATGAAAATCAAGGTGGTTGCACCTCCTGAGAGGAAGTACAGTGTCTGGATTGGTGGGTCTATCTTGGCATCACTCAGTACCTTTCAACAGCTATTGTTCACCGAAAGTGCTTCTGAGTTGGGTCAAGTTCCAATGAGTTGTGATCAAATTCTCAGTCTTGTGCCATATTTCAGTCCTTGGAAGCCAGACTATTTTTATGCAATTGGCGGGATGGATAATGTTAACCAGTGCCCCCGGGCATTGGTTAAGCAACCAAAT

Protein sequence

>MsG0280006418.01.T01

MADAEDIQPLVVDNGTGMVKAGFAGDDAPRAVFPSIIGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTEYLVKILTERGYSFSTSAEKEIVRDVKEKLAYVALDFEQEMETTKSSSAVEKSYELPDGQVITIGSERFRCPEVLFQPSLIGMEATGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQLLFTESASELGQVPMSCDQILSLVPYFSPWKPDYFYAIGGMDNVNQCPRALVKQPN