AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880047656.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880047656.01.T01 MTR_4g132260 91.946 298 7 1 18 315 1 281 0.0 551
MsG0880047656.01.T01 MTR_4g132270 89.933 298 13 1 18 315 24 304 0.0 541
MsG0880047656.01.T01 MTR_4g132270 89.933 298 13 1 18 315 1 281 0.0 540
MsG0880047656.01.T01 MTR_2g023500 72.355 293 64 1 23 315 12 287 1.38e-157 442
MsG0880047656.01.T01 MTR_8g102980 64.846 293 82 2 23 315 76 347 1.99e-138 395
MsG0880047656.01.T01 MTR_8g102980 68.030 269 82 1 23 291 76 340 2.23e-137 393
MsG0880047656.01.T01 MTR_6g087120 58.020 293 102 2 23 315 77 348 2.03e-125 362
MsG0880047656.01.T01 MTR_3g110185 58.362 293 101 2 23 315 550 821 4.57e-119 362
MsG0880047656.01.T01 MTR_4g039890 58.678 242 91 2 48 289 7 239 5.43e-103 302
MsG0880047656.01.T01 MTR_4g039890 51.282 117 52 1 33 149 122 233 3.60e-31 117
MsG0880047656.01.T01 MTR_0430s0010 42.353 85 49 0 112 196 1 85 1.39e-19 82.0
MsG0880047656.01.T01 MTR_4g057685 32.000 150 75 5 35 159 31 178 2.33e-15 73.6
MsG0880047656.01.T01 MTR_4g057685 32.000 150 75 5 35 159 79 226 5.71e-15 73.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880047656.01.T01 AT1G11840 69.667 300 72 2 18 315 40 322 1.76e-154 435
MsG0880047656.01.T01 AT1G11840 69.667 300 72 2 18 315 1 283 4.14e-154 433
MsG0880047656.01.T01 AT1G11840 69.667 300 72 2 18 315 1 283 4.14e-154 433
MsG0880047656.01.T01 AT1G11840 69.667 300 72 2 18 315 1 283 4.14e-154 433
MsG0880047656.01.T01 AT1G11840 69.667 300 72 2 18 315 1 283 4.14e-154 433
MsG0880047656.01.T01 AT1G67280 63.481 293 86 2 23 315 79 350 4.26e-135 387
MsG0880047656.01.T01 AT1G67280 63.604 283 82 2 33 315 1 262 6.05e-130 371
MsG0880047656.01.T01 AT1G11840 73.516 219 56 1 18 234 1 219 2.00e-119 343
MsG0880047656.01.T01 AT1G11840 42.149 121 66 1 163 283 18 134 1.27e-24 100
MsG0880047656.01.T01 AT1G11840 44.048 84 47 0 33 116 148 231 7.71e-17 78.6
MsG0880047656.01.T01 AT1G08110 30.714 140 70 4 35 149 30 167 2.38e-12 65.1
MsG0880047656.01.T01 AT1G08110 30.714 140 70 4 35 149 30 167 2.38e-12 65.1
MsG0880047656.01.T01 AT1G08110 30.714 140 70 4 35 149 30 167 2.38e-12 65.1
MsG0880047656.01.T01 AT1G08110 30.769 143 66 5 35 149 80 217 3.82e-12 65.5

Find 88 sgRNAs with CRISPR-Local

Find 317 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCATCCTTCTGGATCTAAAA+AGG 0.229003 8:+89278016 None:intergenic
ATGTTAATTCAACAGCAAAA+TGG 0.266019 8:+89281102 None:intergenic
AAGCGACGGTTGTCTTTCTT+TGG 0.309497 8:+89281354 None:intergenic
CTTCGCGTTGGTGATTTAGA+AGG 0.318402 8:-89278884 MsG0880047656.01.T01:CDS
CTCTTCACTCCAGTTCCTTC+AGG 0.321852 8:+89277839 None:intergenic
AATAGTCTCGCAATGTTTAT+CGG 0.325779 8:-89277747 MsG0880047656.01.T01:three_prime_UTR
TTTATTAATTGTTAGATTAT+GGG 0.334646 8:-89279211 MsG0880047656.01.T01:intron
TGGTGTCACGGAATACTCTA+AGG 0.339259 8:-89278303 MsG0880047656.01.T01:CDS
TTGGAGTTGACATATAATTA+TGG 0.349283 8:-89278323 MsG0880047656.01.T01:CDS
ATGCAACCAGGGCCAATTCC+TGG 0.371022 8:-89278059 MsG0880047656.01.T01:CDS
AAGGGAGGCTGGTCCAGTTC+AGG 0.391742 8:-89279005 MsG0880047656.01.T01:CDS
GCAGATGGCTGAGATTGATT+TGG 0.397177 8:-89281382 MsG0880047656.01.T01:intron
ACAGTTGTCCCACCCTGAAC+TGG 0.400562 8:+89278992 None:intergenic
CAGTACACTATTGCTATACT+TGG 0.408650 8:-89278374 MsG0880047656.01.T01:CDS
CATACTTAATGGTGCGTTCA+AGG 0.411264 8:+89281304 None:intergenic
TACATAGGCTCTGGGCTTGA+AGG 0.411735 8:-89278595 MsG0880047656.01.T01:intron
TGTTAATTCAACAGCAAAAT+GGG 0.413274 8:+89281103 None:intergenic
GGTCGTGAACTATAGGTCTT+TGG 0.418204 8:+89278924 None:intergenic
TATGATGTTGGAGATGGCTT+TGG 0.424364 8:-89279179 MsG0880047656.01.T01:CDS
CGAAGCATTATTTGACAGAA+TGG 0.435714 8:+89278902 None:intergenic
TTTGTGTTAAGGCCAGGAAT+TGG 0.436059 8:+89278047 None:intergenic
AGGAAGTGACCTTTGTGTTA+AGG 0.436766 8:+89278036 None:intergenic
TGAAGATTTCCTGAAGGAAC+TGG 0.439430 8:-89277848 MsG0880047656.01.T01:CDS
CTTCATGTTGTTTATCGTGT+TGG 0.442764 8:-89281330 MsG0880047656.01.T01:CDS
AAGAAATAAGTAGCAGTCCT+AGG 0.447586 8:-89277807 MsG0880047656.01.T01:three_prime_UTR
AATATATAACAGATTGCTAT+TGG 0.449282 8:-89278152 MsG0880047656.01.T01:intron
CAGAATGGGTCGTGAACTAT+AGG 0.453922 8:+89278917 None:intergenic
GTTGAGCACATTCGTGCTAA+AGG 0.461496 8:-89279040 MsG0880047656.01.T01:CDS
GGAAACATCACCTTGTTCTC+AGG 0.463793 8:+89278552 None:intergenic
AGGGAGGCTGGTCCAGTTCA+GGG 0.464869 8:-89279004 MsG0880047656.01.T01:CDS
GCATTGGCATATTTCTCCTC+AGG 0.482452 8:+89281152 None:intergenic
GTGACCTTTGTGTTAAGGCC+AGG 0.488960 8:+89278041 None:intergenic
CTCCAAGCTCTTGTGTGACT+AGG 0.490880 8:+89278093 None:intergenic
AGACAAAGAGATTAAAGAGA+TGG 0.499388 8:-89282844 MsG0880047656.01.T01:CDS
GGGCTTGAAGGTGGTGAGGA+AGG 0.499959 8:-89278583 MsG0880047656.01.T01:CDS
TTATTAATTGTTAGATTATG+GGG 0.500456 8:-89279210 MsG0880047656.01.T01:intron
AGTGCAAAAGTGTAGCCATC+AGG 0.500981 8:+89278950 None:intergenic
AACCTAGTCACACAAGAGCT+TGG 0.504613 8:-89278095 MsG0880047656.01.T01:CDS
ATAGTAGATTAACATGCAAA+AGG 0.507245 8:+89277648 None:intergenic
TGGCTGAGATTGATTTGGAT+TGG 0.509984 8:-89281377 MsG0880047656.01.T01:CDS
CAGTCCTAGGTAGTGAGACT+AGG 0.512406 8:-89277794 MsG0880047656.01.T01:three_prime_UTR
GGAAACATCACAAGGGAGGC+TGG 0.514310 8:-89279016 MsG0880047656.01.T01:CDS
AACTGTTATTGCCTTTGTGA+AGG 0.515188 8:-89278975 MsG0880047656.01.T01:CDS
TTAACACAATAATAAACATA+AGG 0.516713 8:+89277720 None:intergenic
TTGGGTATAAAGAGGAGGAC+GGG 0.522658 8:-89278355 MsG0880047656.01.T01:CDS
ACTCCCGTACAAAACCTTAG+TGG 0.524097 8:-89277966 MsG0880047656.01.T01:CDS
GAAGCATTATTTGACAGAAT+GGG 0.529984 8:+89278903 None:intergenic
GCCAAATCCAACAAAAGCAT+TGG 0.540130 8:+89281136 None:intergenic
TGCTATACTTGGGTATAAAG+AGG 0.540568 8:-89278363 MsG0880047656.01.T01:CDS
GGAGGACGGGGCAACTGTGT+TGG 0.541084 8:-89278342 MsG0880047656.01.T01:CDS
TAGTCACACAAGAGCTTGGA+GGG 0.541837 8:-89278091 MsG0880047656.01.T01:CDS
ATCATATTTACATAGGCTCT+GGG 0.543253 8:-89278603 MsG0880047656.01.T01:intron
TTAAGGCCAGGAATTGGCCC+TGG 0.550152 8:+89278053 None:intergenic
AGGCTGGTCCAGTTCAGGGT+GGG 0.552550 8:-89279000 MsG0880047656.01.T01:CDS
GACATATAATTATGGTGTCA+CGG 0.562845 8:-89278315 MsG0880047656.01.T01:CDS
CTAGTCACACAAGAGCTTGG+AGG 0.565602 8:-89278092 MsG0880047656.01.T01:CDS
GAGGCAGAGAGATGTTCCTG+AGG 0.566560 8:-89281168 MsG0880047656.01.T01:CDS
CTCTGGGCTTGAAGGTGGTG+AGG 0.568136 8:-89278587 MsG0880047656.01.T01:CDS
GGGGAGATCACTATGCAACC+AGG 0.570329 8:-89278071 MsG0880047656.01.T01:CDS
CGTTCACCGACCGACCACTA+AGG 0.571461 8:+89277952 None:intergenic
GGGGTGACTTCGTATGATGT+TGG 0.586000 8:-89279191 MsG0880047656.01.T01:CDS
ACTTCGTATGATGTTGGAGA+TGG 0.588102 8:-89279185 MsG0880047656.01.T01:CDS
GGTTGATAATCCTGAGAACA+AGG 0.594442 8:-89278562 MsG0880047656.01.T01:intron
TAAGGGAACTGCTTATGCAC+AGG 0.602244 8:-89278285 MsG0880047656.01.T01:intron
CAACACGATAAACAACATGA+AGG 0.610027 8:+89281331 None:intergenic
ATAGGCTCTGGGCTTGAAGG+TGG 0.613134 8:-89278592 MsG0880047656.01.T01:intron
TTATTGTGTTAACTTTCATG+TGG 0.616077 8:-89277709 MsG0880047656.01.T01:three_prime_UTR
TGTCAAATAATGCTTCGCGT+TGG 0.616848 8:-89278896 MsG0880047656.01.T01:CDS
TGACAATGAAGATTTCCTGA+AGG 0.617117 8:-89277854 MsG0880047656.01.T01:CDS
AGTACACTATTGCTATACTT+GGG 0.617674 8:-89278373 MsG0880047656.01.T01:CDS
GCCTTTGTGAAGGATCCTGA+TGG 0.627316 8:-89278965 MsG0880047656.01.T01:CDS
CTAGCCTAGTCTCACTACCT+AGG 0.627502 8:+89277790 None:intergenic
CTAAAGGTGGAAACATCACA+AGG 0.631390 8:-89279024 MsG0880047656.01.T01:CDS
GAGCACATTCGTGCTAAAGG+TGG 0.633141 8:-89279037 MsG0880047656.01.T01:CDS
GAGGCTGGTCCAGTTCAGGG+TGG 0.633429 8:-89279001 MsG0880047656.01.T01:CDS
TGGGTATAAAGAGGAGGACG+GGG 0.637554 8:-89278354 MsG0880047656.01.T01:CDS
GGTGTCACGGAATACTCTAA+GGG 0.641151 8:-89278302 MsG0880047656.01.T01:CDS
CTTGGGTATAAAGAGGAGGA+CGG 0.651509 8:-89278356 MsG0880047656.01.T01:CDS
AAACAACATGAAGGAAGCGA+CGG 0.653747 8:+89281340 None:intergenic
ACAAAACCTTAGTGGTCGGT+CGG 0.654732 8:-89277958 MsG0880047656.01.T01:intron
CCGTACAAAACCTTAGTGGT+CGG 0.661348 8:-89277962 MsG0880047656.01.T01:CDS
AATTCCTGGCCTTAACACAA+AGG 0.663624 8:-89278045 MsG0880047656.01.T01:CDS
GGGAGATCACTATGCAACCA+GGG 0.666646 8:-89278070 MsG0880047656.01.T01:CDS
TATACTTGGGTATAAAGAGG+AGG 0.676715 8:-89278360 MsG0880047656.01.T01:CDS
AGGTGGAAACATCACAAGGG+AGG 0.685845 8:-89279020 MsG0880047656.01.T01:CDS
AGTCACACAAGAGCTTGGAG+GGG 0.702624 8:-89278090 MsG0880047656.01.T01:CDS
GCCATCAGGATCCTTCACAA+AGG 0.716733 8:+89278964 None:intergenic
TAAAGGTGGAAACATCACAA+GGG 0.778099 8:-89279023 MsG0880047656.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTATTATTTTTTTTTATT+AGG - Chr8:89280030-89280049 MsG0880047656.01.T01:intron 0.0%
!! AAATTAAACAAAATTTATGT+AGG + Chr8:89280111-89280130 None:intergenic 10.0%
!! ATGATATATATAATAAACAA+CGG + Chr8:89279572-89279591 None:intergenic 10.0%
!! TCAATTTATAAAATTTACAT+AGG + Chr8:89279671-89279690 None:intergenic 10.0%
!! TTTATTAATTGTTAGATTAT+GGG - Chr8:89281237-89281256 MsG0880047656.01.T01:intron 10.0%
!!! AAAATTGTTTTTTTTTTGTT+AGG + Chr8:89279742-89279761 None:intergenic 10.0%
!!! AAATTGTTTTTTTTTTGTTA+GGG + Chr8:89279741-89279760 None:intergenic 10.0%
!!! AGAACATTTATTTTTTTTAA+TGG - Chr8:89278382-89278401 MsG0880047656.01.T01:intron 10.0%
!!! ATTAATTTTAGGATTAATTA+TGG - Chr8:89279429-89279448 MsG0880047656.01.T01:intron 10.0%
!!! TAATTTCTAGATTTTTTTTA+AGG + Chr8:89278302-89278321 None:intergenic 10.0%
!!! TATTATTTTTTTTTATTAGG+AGG - Chr8:89280033-89280052 MsG0880047656.01.T01:intron 10.0%
!!! TATTTGTTTGTTTTATTTTT+AGG + Chr8:89278068-89278087 None:intergenic 10.0%
!!! TTAAACAATCATAATTTTAT+AGG + Chr8:89279640-89279659 None:intergenic 10.0%
!!! TTAATTTTAGGATTAATTAT+GGG - Chr8:89279430-89279449 MsG0880047656.01.T01:intron 10.0%
!!! TTATATTTTGAAATAATTGA+TGG - Chr8:89278764-89278783 MsG0880047656.01.T01:intron 10.0%
!!! TTTATTTTTTTTTTTTGTGT+AGG - Chr8:89282564-89282583 MsG0880047656.01.T01:intron 10.0%
!!! TTTTAAAATATTAATAGAGT+TGG - Chr8:89280434-89280453 MsG0880047656.01.T01:intron 10.0%
!!! TTTTATTAATTGTTAGATTA+TGG - Chr8:89281236-89281255 MsG0880047656.01.T01:intron 10.0%
!! ACATATAAAAAGGAAATTAA+AGG + Chr8:89279396-89279415 None:intergenic 15.0%
!! AGAAAAAAATAGTGATAATA+AGG + Chr8:89281015-89281034 None:intergenic 15.0%
!! AGTAATAAGTCAATAATTAT+AGG + Chr8:89278157-89278176 None:intergenic 15.0%
!! ATCATAAATTAACACTAAAT+CGG - Chr8:89277793-89277812 MsG0880047656.01.T01:three_prime_UTR 15.0%
!! ATCATTTGAATTGTATTTAT+TGG - Chr8:89280693-89280712 MsG0880047656.01.T01:intron 15.0%
!! CATATAAAAAGGAAATTAAA+GGG + Chr8:89279395-89279414 None:intergenic 15.0%
!! CATTAAATAATTTATGTATG+TGG + Chr8:89281133-89281152 None:intergenic 15.0%
!! GAGAAATAATACATATAAAA+AGG + Chr8:89279406-89279425 None:intergenic 15.0%
!! TAGCAAAAATAAATTGAAAA+AGG + Chr8:89280991-89281010 None:intergenic 15.0%
!! TTAACACAATAATAAACATA+AGG + Chr8:89282731-89282750 None:intergenic 15.0%
!! TTATTAATTGTTAGATTATG+GGG - Chr8:89281238-89281257 MsG0880047656.01.T01:intron 15.0%
!! TTCGAAATATTAATAGATTT+GGG + Chr8:89280205-89280224 None:intergenic 15.0%
!! TTTATATAAATAGATTAGAG+TGG - Chr8:89278349-89278368 MsG0880047656.01.T01:CDS 15.0%
!! TTTCGAAATATTAATAGATT+TGG + Chr8:89280206-89280225 None:intergenic 15.0%
!!! ATAATTATTGACTTATTACT+AGG - Chr8:89278157-89278176 MsG0880047656.01.T01:intron 15.0%
!!! CATTTATTTTTTTTAATGGA+TGG - Chr8:89278386-89278405 MsG0880047656.01.T01:intron 15.0%
!!! TATTTCTCTTCATTAATTTT+AGG - Chr8:89279418-89279437 MsG0880047656.01.T01:intron 15.0%
!!! TGCTATTTTTTTTTTTTTGA+AGG + Chr8:89278870-89278889 None:intergenic 15.0%
!!! TTTATTTTAGGTTTACAAAT+TGG - Chr8:89281386-89281405 MsG0880047656.01.T01:intron 15.0%
!!! TTTGCTTCAATTTTTATTTT+AGG - Chr8:89281374-89281393 MsG0880047656.01.T01:CDS 15.0%
!! AACATAAATTTGCACTAAAT+CGG - Chr8:89277816-89277835 MsG0880047656.01.T01:three_prime_UTR 20.0%
!! AACTATTTGTTTAATGAGTT+TGG + Chr8:89278330-89278349 None:intergenic 20.0%
!! AATATAATTATAAACGGTTG+AGG + Chr8:89278751-89278770 None:intergenic 20.0%
!! AATATATAACAGATTGCTAT+TGG - Chr8:89282296-89282315 MsG0880047656.01.T01:intron 20.0%
!! AATTCAAATGATAAAAGACT+AGG + Chr8:89280685-89280704 None:intergenic 20.0%
!! ATAAGAAAAATAGAGAGAAA+AGG + Chr8:89278662-89278681 None:intergenic 20.0%
!! ATTAATTGTCTCTTGTAAAT+AGG - Chr8:89281163-89281182 MsG0880047656.01.T01:CDS 20.0%
!! ATTCAAATGATAAAAGACTA+GGG + Chr8:89280684-89280703 None:intergenic 20.0%
!! ATTGAAAAAGGATATGAAAA+AGG + Chr8:89280979-89280998 None:intergenic 20.0%
!! ATTTACCATAAGAAAATGTT+GGG + Chr8:89278460-89278479 None:intergenic 20.0%
!! CAAAAGTTAAACATACTTAA+TGG + Chr8:89279158-89279177 None:intergenic 20.0%
!! TAAGAAAAATAGAGAGAAAA+GGG + Chr8:89278661-89278680 None:intergenic 20.0%
!! TATTTACCATAAGAAAATGT+TGG + Chr8:89278461-89278480 None:intergenic 20.0%
!! TCGAAATATTAATAGATTTG+GGG + Chr8:89280204-89280223 None:intergenic 20.0%
!! TTAGTTCATAAGTTAAAAAG+TGG - Chr8:89282186-89282205 MsG0880047656.01.T01:intron 20.0%
!! TTTATTCATCTTTGAATCTT+GGG + Chr8:89277736-89277755 None:intergenic 20.0%
!!! ACAAAAATTGTCTCAAATTT+TGG - Chr8:89278699-89278718 MsG0880047656.01.T01:intron 20.0%
!!! ACAAAACTTGTTTTAAGTTT+CGG + Chr8:89278524-89278543 None:intergenic 20.0%
!!! ATTATTTTGTGATTTATGTC+AGG + Chr8:89278234-89278253 None:intergenic 20.0%
!!! TAATTTAGTTTCACTGTTTT+TGG - Chr8:89279463-89279482 MsG0880047656.01.T01:intron 20.0%
! AACACATGCAAAAGTAATTA+AGG + Chr8:89279046-89279065 None:intergenic 25.0%
! AAGGGAATTATTACCATAAA+AGG - Chr8:89280888-89280907 MsG0880047656.01.T01:intron 25.0%
! AATATGCATTAAACCAAATG+TGG - Chr8:89281794-89281813 MsG0880047656.01.T01:intron 25.0%
! ACCAAATCAACACATAAATA+TGG - Chr8:89277944-89277963 MsG0880047656.01.T01:intron 25.0%
! AGTAAATTAAACCACCAAAT+TGG + Chr8:89280493-89280512 None:intergenic 25.0%
! ATAGTAGATTAACATGCAAA+AGG + Chr8:89282803-89282822 None:intergenic 25.0%
! ATGTTAATTCAACAGCAAAA+TGG + Chr8:89279349-89279368 None:intergenic 25.0%
! ATTACTGTGAAATGCTAATA+AGG - Chr8:89278252-89278271 MsG0880047656.01.T01:intron 25.0%
! CCAAAATCAAAATTGTTAAG+GGG + Chr8:89279718-89279737 None:intergenic 25.0%
! CTTATGGATCATATTTACAT+AGG - Chr8:89281838-89281857 MsG0880047656.01.T01:intron 25.0%
! CTTATTTCCCTAAAGATAAA+GGG - Chr8:89279852-89279871 MsG0880047656.01.T01:intron 25.0%
! GCCAAAATCAAAATTGTTAA+GGG + Chr8:89279719-89279738 None:intergenic 25.0%
! GTTTATTCATCTTTGAATCT+TGG + Chr8:89277737-89277756 None:intergenic 25.0%
! TCAAAATAGCATATTTCTCT+TGG - Chr8:89279903-89279922 MsG0880047656.01.T01:intron 25.0%
! TGTTAATTCAACAGCAAAAT+GGG + Chr8:89279348-89279367 None:intergenic 25.0%
! TTATTGTGTTAACTTTCATG+TGG - Chr8:89282739-89282758 MsG0880047656.01.T01:intron 25.0%
! TTATTTCCCTAAAGATAAAG+GGG - Chr8:89279853-89279872 MsG0880047656.01.T01:intron 25.0%
! TTGGAGTTGACATATAATTA+TGG - Chr8:89282125-89282144 MsG0880047656.01.T01:intron 25.0%
! TTGTCAAAAGTTTCTCAATT+AGG + Chr8:89280257-89280238 None:intergenic 25.0%
! TTTGAATAGTGATTGATTGA+TGG + Chr8:89278415-89278434 None:intergenic 25.0%
!! AAAAACTTTTCACAAAGACA+AGG - Chr8:89280407-89280426 MsG0880047656.01.T01:intron 25.0%
!! AAATACCCAACATTTTCTTA+TGG - Chr8:89278452-89278471 MsG0880047656.01.T01:intron 25.0%
!! AATTGAGAAACTTTTGACAA+AGG + Chr8:89280318-89280299 None:intergenic 25.0%
!! ATGGTAATAATTCCCTTTTA+TGG + Chr8:89280885-89280904 None:intergenic 25.0%
!! ATTTAACCCCTATTGTTATT+TGG - Chr8:89280820-89280839 MsG0880047656.01.T01:intron 25.0%
!! CAGCGTTTTATAAAATTAAG+TGG + Chr8:89279766-89279785 None:intergenic 25.0%
!! GAAAAATCGTCTATTTTCTA+AGG - Chr8:89280758-89280777 MsG0880047656.01.T01:intron 25.0%
!! TCAAAAACAGTTTCCTTTTA+TGG + Chr8:89280904-89280923 None:intergenic 25.0%
!! TCTTATTTCCCTAAAGATAA+AGG - Chr8:89279851-89279870 MsG0880047656.01.T01:intron 25.0%
!! TTTTGAGCTTATTTATGGTT+TGG - Chr8:89278985-89279004 MsG0880047656.01.T01:CDS 25.0%
!!! AAAAAGCATATTTTCGTTAG+AGG - Chr8:89279879-89279898 MsG0880047656.01.T01:intron 25.0%
!!! AAAAGCATATTTTCGTTAGA+GGG - Chr8:89279880-89279899 MsG0880047656.01.T01:intron 25.0%
!!! ATGTTTTAGTCTAGCAAAAT+AGG - Chr8:89280726-89280745 MsG0880047656.01.T01:intron 25.0%
!!! ATTTTTAGGATCACAAATGA+TGG + Chr8:89278054-89278073 None:intergenic 25.0%
!!! CATGTTTTTGAGCTTATTTA+TGG - Chr8:89278980-89278999 MsG0880047656.01.T01:CDS 25.0%
!!! TTTAACCCCTATTGTTATTT+GGG - Chr8:89280821-89280840 MsG0880047656.01.T01:intron 25.0%
!!! TTTTCTAAGGACTTTTTGTA+TGG - Chr8:89280771-89280790 MsG0880047656.01.T01:intron 25.0%
AAATAGAGAGAAAAGGGAAA+AGG + Chr8:89278655-89278674 None:intergenic 30.0%
AAATGCTAATGTCTTGGATA+TGG - Chr8:89279215-89279234 MsG0880047656.01.T01:intron 30.0%
AACATAAATATGCGCCAAAT+CGG - Chr8:89277862-89277881 MsG0880047656.01.T01:CDS 30.0%
AATAGTCTCGCAATGTTTAT+CGG - Chr8:89282701-89282720 MsG0880047656.01.T01:intron 30.0%
ACAATCCAAGACATATTTCT+AGG - Chr8:89281612-89281631 MsG0880047656.01.T01:intron 30.0%
ACATGATGTTAGAAACCTAT+AGG + Chr8:89282545-89282564 None:intergenic 30.0%
AGACAAAGAGATTAAAGAGA+TGG - Chr8:89277604-89277623 MsG0880047656.01.T01:three_prime_UTR 30.0%
AGATGAATAAACAAGTCTGA+TGG - Chr8:89277745-89277764 MsG0880047656.01.T01:three_prime_UTR 30.0%
AGTACACTATTGCTATACTT+GGG - Chr8:89282075-89282094 MsG0880047656.01.T01:intron 30.0%
ATCATATTTACATAGGCTCT+GGG - Chr8:89281845-89281864 MsG0880047656.01.T01:intron 30.0%
CGCATATTTATGTTCTGATT+TGG + Chr8:89277856-89277875 None:intergenic 30.0%
CTTATTACTAGGATGAGATA+AGG - Chr8:89278168-89278187 MsG0880047656.01.T01:intron 30.0%
GATGAATAAACAAGTCTGAT+GGG - Chr8:89277746-89277765 MsG0880047656.01.T01:three_prime_UTR 30.0%
GGCCAAAATCAAAATTGTTA+AGG + Chr8:89279720-89279739 None:intergenic 30.0%
GTCAACTTTCTCTTGTAAAT+AGG + Chr8:89281064-89281083 None:intergenic 30.0%
TAACTACATTGCAAAGAAAG+AGG + Chr8:89281927-89281946 None:intergenic 30.0%
TAGGACTATGTGTTAATTCA+AGG + Chr8:89280092-89280111 None:intergenic 30.0%
TATAAAGACATGGACCAAAT+TGG + Chr8:89280163-89280182 None:intergenic 30.0%
TCTATGCTTTCTGATTAGAA+TGG + Chr8:89281977-89281996 None:intergenic 30.0%
TGACAAAAACAAAGAGAAAG+AGG + Chr8:89280367-89280386 None:intergenic 30.0%
TGAGAAGAAAGCTAAAAAGA+GGG + Chr8:89277978-89277997 None:intergenic 30.0%
TGCAAATATTTACAGAGTCA+CGG + Chr8:89279510-89279529 None:intergenic 30.0%
TGCTTAAAATGCTAATGTCT+TGG - Chr8:89279209-89279228 MsG0880047656.01.T01:intron 30.0%
TTATAAAGACAGGACCAATT+TGG - Chr8:89280476-89280495 MsG0880047656.01.T01:intron 30.0%
TTCTTCCTAGAAATATGTCT+TGG + Chr8:89281620-89281639 None:intergenic 30.0%
TTGAGAAGAAAGCTAAAAAG+AGG + Chr8:89277979-89277998 None:intergenic 30.0%
TTTAGTCACTTACACAAGAT+GGG - Chr8:89280562-89280581 MsG0880047656.01.T01:intron 30.0%
! AAATATGCCAATGCTTTTGT+TGG - Chr8:89279305-89279324 MsG0880047656.01.T01:intron 30.0%
! GAAGCATTATTTGACAGAAT+GGG + Chr8:89281548-89281567 None:intergenic 30.0%
! GACATATAATTATGGTGTCA+CGG - Chr8:89282133-89282152 MsG0880047656.01.T01:intron 30.0%
! TGCAATTTTATGTTCCGATT+TGG + Chr8:89277879-89277898 None:intergenic 30.0%
! TTTACAAAGAGTTGCGATTT+TGG + Chr8:89279814-89279833 None:intergenic 30.0%
! TTTTAGTCACTTACACAAGA+TGG - Chr8:89280561-89280580 MsG0880047656.01.T01:intron 30.0%
! TTTTGACCCCTTTATCTTTA+GGG + Chr8:89279862-89279881 None:intergenic 30.0%
! TTTTTGACCCCTTTATCTTT+AGG + Chr8:89279863-89279882 None:intergenic 30.0%
!! CAAGTTTTTGAGCAAAAGAA+TGG + Chr8:89278026-89278045 None:intergenic 30.0%
!! GCCATATTTATGTGTTGATT+TGG + Chr8:89277948-89277967 None:intergenic 30.0%
!!! AACTTGTTTTAAGTTTCGGT+TGG + Chr8:89278520-89278539 None:intergenic 30.0%
!!! ACTTGTTTTAAGTTTCGGTT+GGG + Chr8:89278519-89278538 None:intergenic 30.0%
!!! CCCCTTAACAATTTTGATTT+TGG - Chr8:89279715-89279734 MsG0880047656.01.T01:intron 30.0%
!!! TTAGTTTCACTGTTTTTGGT+TGG - Chr8:89279467-89279486 MsG0880047656.01.T01:intron 30.0%
!!! TTCTTTCAGGTTTTATACTG+AGG - Chr8:89279238-89279257 MsG0880047656.01.T01:intron 30.0%
!!! TTTTTTTTTTGTGTAGGCGT+TGG - Chr8:89282570-89282589 MsG0880047656.01.T01:intron 30.0%
AACTGTTATTGCCTTTGTGA+AGG - Chr8:89281473-89281492 MsG0880047656.01.T01:intron 35.0%
AAGAAATAAGTAGCAGTCCT+AGG - Chr8:89282641-89282660 MsG0880047656.01.T01:intron 35.0%
ACAAATGCATCAATGCCTAT+AGG - Chr8:89282527-89282546 MsG0880047656.01.T01:intron 35.0%
CAAAAACATGCAATCAGCAA+AGG + Chr8:89278970-89278989 None:intergenic 35.0%
CAAAACTCATACACTAAGTG+CGG - Chr8:89280606-89280625 MsG0880047656.01.T01:intron 35.0%
CAAATGTGGTTTATTAACCG+AGG - Chr8:89281808-89281827 MsG0880047656.01.T01:intron 35.0%
CAACACGATAAACAACATGA+AGG + Chr8:89279120-89279139 None:intergenic 35.0%
CAGTACACTATTGCTATACT+TGG - Chr8:89282074-89282093 MsG0880047656.01.T01:intron 35.0%
CGGTTAAGCATACCATAAAA+GGG - Chr8:89280870-89280889 MsG0880047656.01.T01:intron 35.0%
CTCGGTTAATAAACCACATT+TGG + Chr8:89281810-89281829 None:intergenic 35.0%
GAGAGTCACTTATAAAGACA+TGG + Chr8:89280173-89280192 None:intergenic 35.0%
GATCATATTTACATAGGCTC+TGG - Chr8:89281844-89281863 MsG0880047656.01.T01:intron 35.0%
GTATAGCAATAGTGTACTGT+AGG + Chr8:89282073-89282092 None:intergenic 35.0%
GTGACAAAAACATAGAGACA+AGG + Chr8:89280265-89280284 None:intergenic 35.0%
GTGACTCTGTAAATATTTGC+AGG - Chr8:89279509-89279528 MsG0880047656.01.T01:intron 35.0%
TAAAGGTGGAAACATCACAA+GGG - Chr8:89281425-89281444 MsG0880047656.01.T01:intron 35.0%
TAAATAAACCTCCGTTGTCA+CGG - Chr8:89278475-89278494 MsG0880047656.01.T01:intron 35.0%
TATACTTGGGTATAAAGAGG+AGG - Chr8:89282088-89282107 MsG0880047656.01.T01:intron 35.0%
TGACAATGAAGATTTCCTGA+AGG - Chr8:89282594-89282613 MsG0880047656.01.T01:intron 35.0%
TGAGAGTGACTTATAAAGAC+AGG - Chr8:89280466-89280485 MsG0880047656.01.T01:intron 35.0%
TGCTATACTTGGGTATAAAG+AGG - Chr8:89282085-89282104 MsG0880047656.01.T01:intron 35.0%
TTCAAAGTAAATACTCCCTC+CGG + Chr8:89281190-89281209 None:intergenic 35.0%
TTGTCTCTTGTAAATAGGAC+CGG - Chr8:89281168-89281187 MsG0880047656.01.T01:CDS 35.0%
! ACTTCCTTTTTAGATCCAGA+AGG - Chr8:89282428-89282447 MsG0880047656.01.T01:intron 35.0%
! AGAAACTTTTGACAAAGGCA+TGG + Chr8:89280233-89280252 None:intergenic 35.0%
! CCTTTTATGGTATGCTTAAC+CGG + Chr8:89280872-89280891 None:intergenic 35.0%
! CGAAGCATTATTTGACAGAA+TGG + Chr8:89281549-89281568 None:intergenic 35.0%
! CTTCATGTTGTTTATCGTGT+TGG - Chr8:89279118-89279137 MsG0880047656.01.T01:intron 35.0%
! GCATTGATGCATTTGTAATG+TGG + Chr8:89282523-89282542 None:intergenic 35.0%
! GTGCATTTCTCTAAAGATAG+AGG - Chr8:89280004-89280023 MsG0880047656.01.T01:intron 35.0%
! GTTCCTCTTGCTATAAATTG+AGG + Chr8:89277773-89277792 None:intergenic 35.0%
! TTTTAGTCCCCTATTTTGCT+TGG - Chr8:89280128-89280147 MsG0880047656.01.T01:intron 35.0%
AAACAACATGAAGGAAGCGA+CGG + Chr8:89279111-89279130 None:intergenic 40.0%
AAAGACATGGACCAAATTGG+TGG + Chr8:89280160-89280179 None:intergenic 40.0%
AAAGTTGCTGAGAAGAACAG+AGG - Chr8:89279787-89279806 MsG0880047656.01.T01:intron 40.0%
AAATAAACCTCCGTTGTCAC+GGG - Chr8:89278476-89278495 MsG0880047656.01.T01:intron 40.0%
AAGTTGCTGAGAAGAACAGA+GGG - Chr8:89279788-89279807 MsG0880047656.01.T01:intron 40.0%
ACTTCGTATGATGTTGGAGA+TGG - Chr8:89281263-89281282 MsG0880047656.01.T01:intron 40.0%
AGAAACTCTCTTCAACCTCA+AGG + Chr8:89279950-89279969 None:intergenic 40.0%
AGGAAGTGACCTTTGTGTTA+AGG + Chr8:89282415-89282434 None:intergenic 40.0%
AGGAGGACCCAAATAACAAT+AGG + Chr8:89280831-89280850 None:intergenic 40.0%
ATACACTAAGTGCGGAGAAA+TGG - Chr8:89280614-89280633 MsG0880047656.01.T01:intron 40.0%
ATGCAATCAGCAAAGGCAAA+CGG + Chr8:89278963-89278982 None:intergenic 40.0%
ATGTCAGGAGACAAGCAAAT+AGG + Chr8:89278219-89278238 None:intergenic 40.0%
ATTTGATCTGTTAGAGGAGC+AGG + Chr8:89280657-89280676 None:intergenic 40.0%
CATACTTAATGGTGCGTTCA+AGG + Chr8:89279147-89279166 None:intergenic 40.0%
CCATCCTTCTGGATCTAAAA+AGG + Chr8:89282435-89282454 None:intergenic 40.0%
CCGGTTAAGCATACCATAAA+AGG - Chr8:89280869-89280888 MsG0880047656.01.T01:intron 40.0%
CTAAAGGTGGAAACATCACA+AGG - Chr8:89281424-89281443 MsG0880047656.01.T01:intron 40.0%
CTACATGAATTTACTCCCTC+AGG - Chr8:89281037-89281056 MsG0880047656.01.T01:intron 40.0%
CTCTCAGCCAAATGAATTCA+CGG - Chr8:89279968-89279987 MsG0880047656.01.T01:intron 40.0%
CTCTTGTAAATAGGACCTGA+GGG + Chr8:89281055-89281074 None:intergenic 40.0%
GAAAGCTAGTTCAAGCTTCA+AGG + Chr8:89282249-89282268 None:intergenic 40.0%
GAGGACCCAAATAACAATAG+GGG + Chr8:89280829-89280848 None:intergenic 40.0%
GATCCATAAGAACATAGCCT+CGG + Chr8:89281828-89281847 None:intergenic 40.0%
GGAGGACCCAAATAACAATA+GGG + Chr8:89280830-89280849 None:intergenic 40.0%
GGTCCTCAATTTATAGCAAG+AGG - Chr8:89277767-89277786 MsG0880047656.01.T01:three_prime_UTR 40.0%
GGTGACATTTGATCTGTTAG+AGG + Chr8:89280663-89280682 None:intergenic 40.0%
GTCTTGGATATGGTTCTTTC+AGG - Chr8:89279225-89279244 MsG0880047656.01.T01:intron 40.0%
GTTAACTAACCACTGAACAG+AGG + Chr8:89278940-89278959 None:intergenic 40.0%
GTTTGCTCCAAGCAAAATAG+GGG + Chr8:89280138-89280157 None:intergenic 40.0%
TAAAGACAGGACCAATTTGG+TGG - Chr8:89280479-89280498 MsG0880047656.01.T01:intron 40.0%
TAACCGAGGCTATGTTCTTA+TGG - Chr8:89281822-89281841 MsG0880047656.01.T01:intron 40.0%
TATGATGTTGGAGATGGCTT+TGG - Chr8:89281269-89281288 MsG0880047656.01.T01:intron 40.0%
TCTCAGCCAAATGAATTCAC+GGG - Chr8:89279969-89279988 MsG0880047656.01.T01:intron 40.0%
TCTCTTGTAAATAGGACCTG+AGG + Chr8:89281056-89281075 None:intergenic 40.0%
TGAAGATTTCCTGAAGGAAC+TGG - Chr8:89282600-89282619 MsG0880047656.01.T01:intron 40.0%
TGTCAAATAATGCTTCGCGT+TGG - Chr8:89281552-89281571 MsG0880047656.01.T01:intron 40.0%
TGTCAGGAGACAAGCAAATA+GGG + Chr8:89278218-89278237 None:intergenic 40.0%
TTTGTGTTAAGGCCAGGAAT+TGG + Chr8:89282404-89282423 None:intergenic 40.0%
! ACTTTTGCATGTGTTGCAGA+TGG - Chr8:89279051-89279070 MsG0880047656.01.T01:CDS 40.0%
! ATTGCAAAGAAAGAGGCATG+AGG + Chr8:89281920-89281939 None:intergenic 40.0%
! CAGCTTTCTCGTTGCAATTT+TGG + Chr8:89280059-89280078 None:intergenic 40.0%
! CCTTTTTAGATCCAGAAGGA+TGG - Chr8:89282432-89282451 MsG0880047656.01.T01:intron 40.0%
! CTCTTGGGATGAAACTTTTG+AGG - Chr8:89279261-89279280 MsG0880047656.01.T01:intron 40.0%
! CTTACAGTTTTCCATCCTTC+TGG + Chr8:89282446-89282465 None:intergenic 40.0%
! GCCAAATCCAACAAAAGCAT+TGG + Chr8:89279315-89279334 None:intergenic 40.0%
! GCCAATGCTTTTGTTGGATT+TGG - Chr8:89279311-89279330 MsG0880047656.01.T01:intron 40.0%
! GGTTTGCTCCAAGCAAAATA+GGG + Chr8:89280139-89280158 None:intergenic 40.0%
!! AATTCCTGGCCTTAACACAA+AGG - Chr8:89282403-89282422 MsG0880047656.01.T01:intron 40.0%
!! AGGTTTTATACTGAGGCTCT+TGG - Chr8:89279245-89279264 MsG0880047656.01.T01:intron 40.0%
!! GGTTGATAATCCTGAGAACA+AGG - Chr8:89281886-89281905 MsG0880047656.01.T01:intron 40.0%
!! GGTTTTATACTGAGGCTCTT+GGG - Chr8:89279246-89279265 MsG0880047656.01.T01:intron 40.0%
!! TAAGGTTTTGTACGGGAGTT+TGG + Chr8:89282481-89282500 None:intergenic 40.0%
!! TGGCTGAGATTGATTTGGAT+TGG - Chr8:89279071-89279090 MsG0880047656.01.T01:intron 40.0%
!! TGGTTGGTGCTTTTAACTGT+GGG - Chr8:89279483-89279502 MsG0880047656.01.T01:intron 40.0%
!! TGGTTTGCTCCAAGCAAAAT+AGG + Chr8:89280140-89280159 None:intergenic 40.0%
!! TTGGTTGGTGCTTTTAACTG+TGG - Chr8:89279482-89279501 MsG0880047656.01.T01:intron 40.0%
!!! TTTTAAGTTTCGGTTGGGAC+CGG + Chr8:89278514-89278533 None:intergenic 40.0%
AACCTAGTCACACAAGAGCT+TGG - Chr8:89282353-89282372 MsG0880047656.01.T01:intron 45.0%
AAGCGACGGTTGTCTTTCTT+TGG + Chr8:89279097-89279116 None:intergenic 45.0%
ACAAAACCTTAGTGGTCGGT+CGG - Chr8:89282490-89282509 MsG0880047656.01.T01:intron 45.0%
ACGGTGAATCATTCCACACA+AGG + Chr8:89279553-89279572 None:intergenic 45.0%
ACTCCCGTACAAAACCTTAG+TGG - Chr8:89282482-89282501 MsG0880047656.01.T01:intron 45.0%
ATAAGCCAACGTGTCAATCG+TGG + Chr8:89278792-89278811 None:intergenic 45.0%
CAGAATGGGTCGTGAACTAT+AGG + Chr8:89281534-89281553 None:intergenic 45.0%
CCGTACAAAACCTTAGTGGT+CGG - Chr8:89282486-89282505 MsG0880047656.01.T01:intron 45.0%
CTCTTCAACCTCAAGGAACT+CGG + Chr8:89279943-89279962 None:intergenic 45.0%
CTCTTGTAAATAGGACCGGA+GGG - Chr8:89281172-89281191 MsG0880047656.01.T01:CDS 45.0%
CTGTCTCCCGTGAATTCATT+TGG + Chr8:89279978-89279997 None:intergenic 45.0%
CTTGGAGCAAACCACCAATT+TGG - Chr8:89280146-89280165 MsG0880047656.01.T01:intron 45.0%
CTTGGGTATAAAGAGGAGGA+CGG - Chr8:89282092-89282111 MsG0880047656.01.T01:intron 45.0%
GCAGATGGCTGAGATTGATT+TGG - Chr8:89279066-89279085 MsG0880047656.01.T01:intron 45.0%
GCTAGTTCAAGCTTCAAGGT+CGG + Chr8:89282245-89282264 None:intergenic 45.0%
GGAAACATCACCTTGTTCTC+AGG + Chr8:89281899-89281918 None:intergenic 45.0%
GGTCGTGAACTATAGGTCTT+TGG + Chr8:89281527-89281546 None:intergenic 45.0%
GTTATTTGGGTCCTCCTAAC+CGG - Chr8:89280834-89280853 MsG0880047656.01.T01:intron 45.0%
GTTGAGCACATTCGTGCTAA+AGG - Chr8:89281408-89281427 MsG0880047656.01.T01:intron 45.0%
TAAGGGAACTGCTTATGCAC+AGG - Chr8:89282163-89282182 MsG0880047656.01.T01:intron 45.0%
TAGTCACACAAGAGCTTGGA+GGG - Chr8:89282357-89282376 MsG0880047656.01.T01:intron 45.0%
TCTCTTGTAAATAGGACCGG+AGG - Chr8:89281171-89281190 MsG0880047656.01.T01:CDS 45.0%
TGCAATCAGCAAAGGCAAAC+GGG + Chr8:89278962-89278981 None:intergenic 45.0%
TTGGGTATAAAGAGGAGGAC+GGG - Chr8:89282093-89282112 MsG0880047656.01.T01:intron 45.0%
! AGTGCAAAAGTGTAGCCATC+AGG + Chr8:89281501-89281520 None:intergenic 45.0%
! GCATTGGCATATTTCTCCTC+AGG + Chr8:89279299-89279318 None:intergenic 45.0%
! GGTGTCACGGAATACTCTAA+GGG - Chr8:89282146-89282165 MsG0880047656.01.T01:intron 45.0%
!! CCGACCACTAAGGTTTTGTA+CGG + Chr8:89282489-89282508 None:intergenic 45.0%
!! CGACCACTAAGGTTTTGTAC+GGG + Chr8:89282488-89282507 None:intergenic 45.0%
!! CTTCGCGTTGGTGATTTAGA+AGG - Chr8:89281564-89281583 MsG0880047656.01.T01:intron 45.0%
!! TGGTGTCACGGAATACTCTA+AGG - Chr8:89282145-89282164 MsG0880047656.01.T01:intron 45.0%
!! TTTCAAAATATAATTATAAA+CGG + Chr8:89278757-89278776 None:intergenic 5.0%
!!! AAAAATTAATATTTTATACT+TGG - Chr8:89278813-89278832 MsG0880047656.01.T01:intron 5.0%
!!! AAATTTTATAAATTGAATTA+AGG - Chr8:89279675-89279694 MsG0880047656.01.T01:intron 5.0%
!!! ATTAATTATGTTTTTATTTT+AGG - Chr8:89279613-89279632 MsG0880047656.01.T01:intron 5.0%
!!! ATTTTTATTTGTTAAAAAAA+AGG - Chr8:89279590-89279609 MsG0880047656.01.T01:intron 5.0%
AACCACTGAACAGAGGAGTG+AGG + Chr8:89278933-89278952 None:intergenic 50.0%
ACCACTGAACAGAGGAGTGA+GGG + Chr8:89278932-89278951 None:intergenic 50.0%
AGGTGGAAACATCACAAGGG+AGG - Chr8:89281428-89281447 MsG0880047656.01.T01:intron 50.0%
AGTCACACAAGAGCTTGGAG+GGG - Chr8:89282358-89282377 MsG0880047656.01.T01:intron 50.0%
CAGTCCTAGGTAGTGAGACT+AGG - Chr8:89282654-89282673 MsG0880047656.01.T01:intron 50.0%
CTAGCCTAGTCTCACTACCT+AGG + Chr8:89282661-89282680 None:intergenic 50.0%
CTAGTCACACAAGAGCTTGG+AGG - Chr8:89282356-89282375 MsG0880047656.01.T01:intron 50.0%
CTCCAAGCTCTTGTGTGACT+AGG + Chr8:89282358-89282377 None:intergenic 50.0%
CTCTTCACTCCAGTTCCTTC+AGG + Chr8:89282612-89282631 None:intergenic 50.0%
CTCTTTCTGCACACCTTGTG+TGG - Chr8:89279537-89279556 MsG0880047656.01.T01:intron 50.0%
GAGCACATTCGTGCTAAAGG+TGG - Chr8:89281411-89281430 MsG0880047656.01.T01:intron 50.0%
GCCATCAGGATCCTTCACAA+AGG + Chr8:89281487-89281506 None:intergenic 50.0%
GCCTTTGTGAAGGATCCTGA+TGG - Chr8:89281483-89281502 MsG0880047656.01.T01:intron 50.0%
GGGAGATCACTATGCAACCA+GGG - Chr8:89282378-89282397 MsG0880047656.01.T01:intron 50.0%
GGGGTGACTTCGTATGATGT+TGG - Chr8:89281257-89281276 MsG0880047656.01.T01:intron 50.0%
GTGACCTTTGTGTTAAGGCC+AGG + Chr8:89282410-89282429 None:intergenic 50.0%
GTGAGGGATGTCTGTTGGTA+AGG + Chr8:89278916-89278935 None:intergenic 50.0%
TCGACATACTCCCGTGACAA+CGG + Chr8:89278489-89278508 None:intergenic 50.0%
TGGGTATAAAGAGGAGGACG+GGG - Chr8:89282094-89282113 MsG0880047656.01.T01:intron 50.0%
!! GGTTTTGTACGGGAGTTTGG+AGG + Chr8:89282478-89282497 None:intergenic 50.0%
!! TACATAGGCTCTGGGCTTGA+AGG - Chr8:89281853-89281872 MsG0880047656.01.T01:intron 50.0%
ACAGTTGTCCCACCCTGAAC+TGG + Chr8:89281459-89281478 None:intergenic 55.0%
ACATACTCCCGTGACAACGG+AGG + Chr8:89278486-89278505 None:intergenic 55.0%
ATGCAACCAGGGCCAATTCC+TGG - Chr8:89282389-89282408 MsG0880047656.01.T01:intron 55.0%
GAGGAGTGAGGGATGTCTGT+TGG + Chr8:89278921-89278940 None:intergenic 55.0%
GAGGCAGAGAGATGTTCCTG+AGG - Chr8:89279280-89279299 MsG0880047656.01.T01:intron 55.0%
GCGCATCTCTGCACGACTAA+TGG - Chr8:89282270-89282289 MsG0880047656.01.T01:intron 55.0%
GGAAACATCACAAGGGAGGC+TGG - Chr8:89281432-89281451 MsG0880047656.01.T01:intron 55.0%
GGGGAGATCACTATGCAACC+AGG - Chr8:89282377-89282396 MsG0880047656.01.T01:intron 55.0%
GTCTCGAACCGAGTTCCTTG+AGG - Chr8:89279932-89279951 MsG0880047656.01.T01:intron 55.0%
TCCCTCACTCCTCTGTTCAG+TGG - Chr8:89278928-89278947 MsG0880047656.01.T01:CDS 55.0%
TTAAGGCCAGGAATTGGCCC+TGG + Chr8:89282398-89282417 None:intergenic 55.0%
! CAAGGAACTCGGTTCGAGAC+TGG + Chr8:89279932-89279951 None:intergenic 55.0%
! TCACGGGAGTATGTCGACAC+CGG - Chr8:89278492-89278511 MsG0880047656.01.T01:intron 55.0%
!! ATAGGCTCTGGGCTTGAAGG+TGG - Chr8:89281856-89281875 MsG0880047656.01.T01:intron 55.0%
!! TGGTGCCACGATTGACACGT+TGG - Chr8:89278784-89278803 MsG0880047656.01.T01:intron 55.0%
CGTTCACCGACCGACCACTA+AGG + Chr8:89282499-89282518 None:intergenic 60.0%
CTCTGGGCTTGAAGGTGGTG+AGG - Chr8:89281861-89281880 MsG0880047656.01.T01:intron 60.0%
GGGCTTGAAGGTGGTGAGGA+AGG - Chr8:89281865-89281884 MsG0880047656.01.T01:intron 60.0%
GGTATGCTTAACCGGTGCCC+CGG + Chr8:89280864-89280883 None:intergenic 60.0%
GTATGCTTAACCGGTGCCCC+GGG + Chr8:89280863-89280882 None:intergenic 60.0%
TATGCTTAACCGGTGCCCCG+GGG + Chr8:89280862-89280881 None:intergenic 60.0%
! AAGGGAGGCTGGTCCAGTTC+AGG - Chr8:89281443-89281462 MsG0880047656.01.T01:intron 60.0%
! AGGCTGGTCCAGTTCAGGGT+GGG - Chr8:89281448-89281467 MsG0880047656.01.T01:intron 60.0%
! AGGGAGGCTGGTCCAGTTCA+GGG - Chr8:89281444-89281463 MsG0880047656.01.T01:intron 60.0%
GGAGGACGGGGCAACTGTGT+TGG - Chr8:89282106-89282125 MsG0880047656.01.T01:intron 65.0%
! GAGGCTGGTCCAGTTCAGGG+TGG - Chr8:89281447-89281466 MsG0880047656.01.T01:intron 65.0%
GGTCCTCCTAACCGGTGCCC+CGG - Chr8:89280842-89280861 MsG0880047656.01.T01:intron 70.0%
GTCCTCCTAACCGGTGCCCC+GGG - Chr8:89280843-89280862 MsG0880047656.01.T01:intron 70.0%
TCCTCCTAACCGGTGCCCCG+GGG - Chr8:89280844-89280863 MsG0880047656.01.T01:intron 70.0%
TAACCGGTGCCCCGGGGCAC+CGG - Chr8:89280850-89280869 MsG0880047656.01.T01:intron 75.0%
TAACCGGTGCCCCGGGGCAC+CGG + Chr8:89280869-89280850 None:intergenic 75.0%
!!! GCCCCGGGGCACCGGTTAGG+AGG + Chr8:89280848-89280867 None:intergenic 80.0%
!!! GGTGCCCCGGGGCACCGGTT+AGG + Chr8:89280874-89280855 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
Chr8 gene 89277593 89282877 89277593 ID=MsG0880047656.01;Name=MsG0880047656.01
Chr8 mRNA 89277593 89282877 89277593 ID=MsG0880047656.01.T01;Parent=MsG0880047656.01;Name=MsG0880047656.01.T01;_AED=0.47;_eAED=0.52;_QI=0|0.75|0.77|1|0.87|0.77|9|250|315
Chr8 exon 89277593 89277884 89277593 ID=MsG0880047656.01.T01:exon:18802;Parent=MsG0880047656.01.T01
Chr8 exon 89277959 89278162 89277959 ID=MsG0880047656.01.T01:exon:18801;Parent=MsG0880047656.01.T01
Chr8 exon 89278286 89278393 89278286 ID=MsG0880047656.01.T01:exon:18800;Parent=MsG0880047656.01.T01
Chr8 exon 89278563 89278610 89278563 ID=MsG0880047656.01.T01:exon:18799;Parent=MsG0880047656.01.T01
Chr8 exon 89278862 89279074 89278862 ID=MsG0880047656.01.T01:exon:18798;Parent=MsG0880047656.01.T01
Chr8 exon 89279154 89279218 89279154 ID=MsG0880047656.01.T01:exon:18797;Parent=MsG0880047656.01.T01
Chr8 exon 89281099 89281223 89281099 ID=MsG0880047656.01.T01:exon:18796;Parent=MsG0880047656.01.T01
Chr8 exon 89281309 89281400 89281309 ID=MsG0880047656.01.T01:exon:18795;Parent=MsG0880047656.01.T01
Chr8 exon 89282827 89282877 89282827 ID=MsG0880047656.01.T01:exon:18794;Parent=MsG0880047656.01.T01
Chr8 CDS 89282827 89282877 89282827 ID=MsG0880047656.01.T01:cds;Parent=MsG0880047656.01.T01
Chr8 CDS 89281309 89281400 89281309 ID=MsG0880047656.01.T01:cds;Parent=MsG0880047656.01.T01
Chr8 CDS 89281099 89281223 89281099 ID=MsG0880047656.01.T01:cds;Parent=MsG0880047656.01.T01
Chr8 CDS 89279154 89279218 89279154 ID=MsG0880047656.01.T01:cds;Parent=MsG0880047656.01.T01
Chr8 CDS 89278862 89279074 89278862 ID=MsG0880047656.01.T01:cds;Parent=MsG0880047656.01.T01
Chr8 CDS 89278563 89278610 89278563 ID=MsG0880047656.01.T01:cds;Parent=MsG0880047656.01.T01
Chr8 CDS 89278286 89278393 89278286 ID=MsG0880047656.01.T01:cds;Parent=MsG0880047656.01.T01
Chr8 CDS 89277959 89278162 89277959 ID=MsG0880047656.01.T01:cds;Parent=MsG0880047656.01.T01
Chr8 CDS 89277843 89277884 89277843 ID=MsG0880047656.01.T01:cds;Parent=MsG0880047656.01.T01
Chr8 three_prime_UTR 89277593 89277842 89277593 ID=MsG0880047656.01.T01:three_prime_utr;Parent=MsG0880047656.01.T01
Gene Sequence

>MsG0880047656.01.T01

ATGTTCATCGTAGACAAAGAGATTAAAGAGATGGAGAAGAAATACATGAGAATGGCTGAGATTGATTTGGATTGGCCAAAGAAAGACAACCGTCGCTTCCTTCATGTTGTTTATCGTGTTGGTGACCTTGAACGCACCATTAAGTTTTATACTGAGGCTCTTGGGATGAAACTTTTGAGGCAGAGAGATGTTCCTGAGGAGAAATATGCCAATGCTTTTGTTGGATTTGGCGATGAACATTCCCATTTTGCTGTTGAATTAACATATAATTATGGGGTGACTTCGTATGATGTTGGAGATGGCTTTGGACATTTTGCAATTGCAACTCAAGATGTTTACAAATTGGTTGAGCACATTCGTGCTAAAGGTGGAAACATCACAAGGGAGGCTGGTCCAGTTCAGGGTGGGACAACTGTTATTGCCTTTGTGAAGGATCCTGATGGCTACACTTTTGCACTTGTCCAAAGACCTATAGTTCACGACCCATTCTGTCAAATAATGCTTCGCGTTGGTGATTTAGAAGGCGCCATAAAGTTTTATGAAAAGGCTCTGGGCTTGAAGGTGGTGAGGAAGGTTGATAATCCTGAGAACAAGTACACTATTGCTATACTTGGGTATAAAGAGGAGGACGGGGCAACTGTGTTGGAGTTGACATATAATTATGGTGTCACGGAATACTCTAAGGGAACTGCTTATGCACAGATTGCTATTGGTACTGATGATGTCTACAAGAGTGCTGATGTAGTCAACCTAGTCACACAAGAGCTTGGAGGGGAGATCACTATGCAACCAGGGCCAATTCCTGGCCTTAACACAAAGGTCACTTCCTTTTTAGATCCAGAAGGATGGAAAACTGTAAGTTTGTTTTTCCTCCAAACTCCCGTACAAAACCTTAGTGGTCGGTCGGCGTTGGTTGACAATGAAGATTTCCTGAAGGAACTGGAGTGA

Protein sequence

>MsG0880047656.01.T01

MFIVDKEIKEMEKKYMRMAEIDLDWPKKDNRRFLHVVYRVGDLERTIKFYTEALGMKLLRQRDVPEEKYANAFVGFGDEHSHFAVELTYNYGVTSYDVGDGFGHFAIATQDVYKLVEHIRAKGGNITREAGPVQGGTTVIAFVKDPDGYTFALVQRPIVHDPFCQIMLRVGDLEGAIKFYEKALGLKVVRKVDNPENKYTIAILGYKEEDGATVLELTYNYGVTEYSKGTAYAQIAIGTDDVYKSADVVNLVTQELGGEITMQPGPIPGLNTKVTSFLDPEGWKTVSLFFLQTPVQNLSGRSALVDNEDFLKELE*