Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480023909.01.T01 | XP_020220489.1 | 98.182 | 55 | 1 | 0 | 41 | 95 | 91 | 145 | 2.26E-29 | 112 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480023909.01.T01 | F4JJT9 | 83.636 | 55 | 9 | 0 | 41 | 95 | 609 | 663 | 8.35E-26 | 102 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480023909.01.T01 | A0A072TW65 | 98.182 | 55 | 1 | 0 | 41 | 95 | 399 | 453 | 1.45e-27 | 114 |
| MsG0480023909.01.T01 | A0A392MWS1 | 96.296 | 54 | 2 | 0 | 42 | 95 | 1 | 54 | 2.95e-29 | 108 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048878.01 | MsG0480023909.01 | 0.813186 | 2.907811e-51 | 1.885801e-48 |
| MsG0080049040.01 | MsG0480023909.01 | 0.809308 | 2.017692e-50 | 1.180532e-47 |
| MsG0080049068.01 | MsG0480023909.01 | 0.832036 | 1.188832e-55 | 1.313149e-52 |
| MsG0080049069.01 | MsG0480023909.01 | 0.811380 | 7.207103e-51 | 4.454328e-48 |
| MsG0180000355.01 | MsG0480023909.01 | 0.850428 | 1.708891e-60 | 3.346510e-57 |
| MsG0180001270.01 | MsG0480023909.01 | 0.845194 | 4.728915e-59 | 7.818929e-56 |
| MsG0180003353.01 | MsG0480023909.01 | 0.838493 | 2.784009e-57 | 3.735059e-54 |
| MsG0180003815.01 | MsG0480023909.01 | 0.808272 | 3.360741e-50 | 1.913319e-47 |
| MsG0180003821.01 | MsG0480023909.01 | 0.824423 | 8.137896e-54 | 7.204595e-51 |
| MsG0180004192.01 | MsG0480023909.01 | 0.804544 | 2.053175e-49 | 1.061484e-46 |
| MsG0180004276.01 | MsG0480023909.01 | 0.805052 | 1.607817e-49 | 8.422396e-47 |
| MsG0180004448.01 | MsG0480023909.01 | 0.809678 | 1.680714e-50 | 9.931331e-48 |
| MsG0180004605.01 | MsG0480023909.01 | -0.816677 | 4.888998e-52 | 3.486871e-49 |
| MsG0180005169.01 | MsG0480023909.01 | 0.868703 | 5.361715e-66 | 1.958457e-62 |
| MsG0180005807.01 | MsG0480023909.01 | 0.800275 | 1.555407e-48 | 7.212637e-46 |
| MsG0180006031.01 | MsG0480023909.01 | 0.821205 | 4.569575e-53 | 3.693800e-50 |
| MsG0180006034.01 | MsG0480023909.01 | -0.803957 | 2.720613e-49 | 1.385571e-46 |
| MsG0280006418.01 | MsG0480023909.01 | -0.838313 | 3.096432e-57 | 4.131077e-54 |
| MsG0380014584.01 | MsG0480023909.01 | 0.873881 | 1.042950e-67 | 4.598571e-64 |
| MsG0480018584.01 | MsG0480023909.01 | 0.807372 | 5.219248e-50 | 2.902017e-47 |
| MsG0480018850.01 | MsG0480023909.01 | 0.807303 | 5.398739e-50 | 2.996573e-47 |
| MsG0480018911.01 | MsG0480023909.01 | 0.826547 | 2.555544e-54 | 2.403976e-51 |
| MsG0480019007.01 | MsG0480023909.01 | 0.824696 | 7.017192e-54 | 6.262717e-51 |
| MsG0480020690.01 | MsG0480023909.01 | 0.833158 | 6.261307e-56 | 7.150671e-53 |
| MsG0480022401.01 | MsG0480023909.01 | 0.813365 | 2.656085e-51 | 1.731140e-48 |
| MsG0480022587.01 | MsG0480023909.01 | 0.825839 | 3.766942e-54 | 3.473032e-51 |
| MsG0480022647.01 | MsG0480023909.01 | 0.839342 | 1.678197e-57 | 2.310822e-54 |
| MsG0480023009.01 | MsG0480023909.01 | 0.829818 | 4.159789e-55 | 4.305795e-52 |
| MsG0480023073.01 | MsG0480023909.01 | 0.808216 | 3.454554e-50 | 1.963790e-47 |
| MsG0480023162.01 | MsG0480023909.01 | 0.822254 | 2.612968e-53 | 2.175644e-50 |
| MsG0480023314.01 | MsG0480023909.01 | 0.819592 | 1.071371e-52 | 8.280022e-50 |
| MsG0480023738.01 | MsG0480023909.01 | 0.806574 | 7.700493e-50 | 4.194089e-47 |
| MsG0480023739.01 | MsG0480023909.01 | 0.810416 | 1.165058e-50 | 7.018579e-48 |
| MsG0480023867.01 | MsG0480023909.01 | 0.823383 | 1.426840e-53 | 1.226530e-50 |
| MsG0480023877.01 | MsG0480023909.01 | 0.816922 | 4.308469e-52 | 3.093575e-49 |
| MsG0480023909.01 | MsG0580024084.01 | 0.808205 | 3.472646e-50 | 1.973522e-47 |
| MsG0480023909.01 | MsG0580024619.01 | 0.825873 | 3.697567e-54 | 3.412415e-51 |
| MsG0480023909.01 | MsG0580024873.01 | 0.816197 | 6.261476e-52 | 4.407732e-49 |
| MsG0480023909.01 | MsG0580025369.01 | -0.808617 | 2.836633e-50 | 1.629393e-47 |
| MsG0480023909.01 | MsG0580028021.01 | 0.818594 | 1.806726e-52 | 1.358177e-49 |
| MsG0480023909.01 | MsG0680031010.01 | 0.824844 | 6.477386e-54 | 5.805116e-51 |
| MsG0480023909.01 | MsG0680031469.01 | 0.802187 | 6.318284e-49 | 3.075221e-46 |
| MsG0480023909.01 | MsG0680032473.01 | -0.802229 | 6.195317e-49 | 3.018598e-46 |
| MsG0480023909.01 | MsG0680032827.01 | 0.828888 | 6.999504e-55 | 7.048133e-52 |
| MsG0480023909.01 | MsG0680032830.01 | 0.813404 | 2.603487e-51 | 1.698701e-48 |
| MsG0480023909.01 | MsG0680033377.01 | 0.826939 | 2.060155e-54 | 1.960116e-51 |
| MsG0480023909.01 | MsG0680034064.01 | 0.830107 | 3.538484e-55 | 3.692378e-52 |
| MsG0480023909.01 | MsG0680035877.01 | 0.829102 | 6.211551e-55 | 6.294666e-52 |
| MsG0480023909.01 | MsG0780037157.01 | 0.801707 | 7.928571e-49 | 3.812186e-46 |
| MsG0480023909.01 | MsG0780037701.01 | 0.802207 | 6.258492e-49 | 3.047640e-46 |
| MsG0480023909.01 | MsG0780037710.01 | 0.817437 | 3.299847e-52 | 2.403107e-49 |
| MsG0480023909.01 | MsG0780040284.01 | 0.824510 | 7.763599e-54 | 6.890939e-51 |
| MsG0480023909.01 | MsG0780041391.01 | 0.819791 | 9.649303e-53 | 7.499230e-50 |
| MsG0480023909.01 | MsG0880041947.01 | 0.810585 | 1.071265e-50 | 6.482838e-48 |
| MsG0480023909.01 | MsG0880044392.01 | 0.832051 | 1.178471e-55 | 1.302298e-52 |
| MsG0480023909.01 | MsG0880044487.01 | 0.804368 | 2.234188e-49 | 1.149896e-46 |
| MsG0480023909.01 | MsG0880045010.01 | -0.830058 | 3.637015e-55 | 3.789779e-52 |
| MsG0480023909.01 | MsG0880045017.01 | 0.813075 | 3.075789e-51 | 1.988760e-48 |
| MsG0480023909.01 | MsG0880046382.01 | 0.811165 | 8.025829e-51 | 4.932193e-48 |
| MsG0480023909.01 | MsG0880046583.01 | 0.825218 | 5.285501e-54 | 4.787723e-51 |
| MsG0480023909.01 | MsG0880046765.01 | 0.833326 | 5.687198e-56 | 6.528178e-53 |
| MsG0480023909.01 | MsG0880046867.01 | 0.804186 | 2.437818e-49 | 1.248789e-46 |
| MsG0480023909.01 | MsG0880047322.01 | 0.804988 | 1.658132e-49 | 8.671639e-47 |
| MsG0480023909.01 | MsG0880047324.01 | 0.810597 | 1.065240e-50 | 6.448346e-48 |
| MsG0480023909.01 | MsG0880047422.01 | -0.804796 | 1.819242e-49 | 9.467339e-47 |
| MsG0480023909.01 | MsG0880047587.01 | 0.859792 | 3.236223e-63 | 8.652135e-60 |
| MsG0480023909.01 | MsG0880047656.01 | 0.813010 | 3.177874e-51 | 2.051302e-48 |
| MsG0480023909.01 | MsG0880047703.01 | 0.822348 | 2.485822e-53 | 2.075400e-50 |
| MsG0480023909.01 | MsG0880047763.01 | 0.802264 | 6.092593e-49 | 2.971275e-46 |
| MsG0380015547.01 | MsG0480023909.01 | 0.802826 | 4.666496e-49 | 2.308754e-46 |
| MsG0380015784.01 | MsG0480023909.01 | 0.818691 | 1.717468e-52 | 1.294550e-49 |
| MsG0380016194.01 | MsG0480023909.01 | 0.828453 | 8.913396e-55 | 8.863908e-52 |
| MsG0380016284.01 | MsG0480023909.01 | 0.820194 | 7.803436e-53 | 6.133128e-50 |
| MsG0380016347.01 | MsG0480023909.01 | -0.820288 | 7.424047e-53 | 5.849812e-50 |
| MsG0380016559.01 | MsG0480023909.01 | 0.822340 | 2.496595e-53 | 2.083865e-50 |
| MsG0380016560.01 | MsG0480023909.01 | 0.819607 | 1.062895e-52 | 8.217572e-50 |
| MsG0380016671.01 | MsG0480023909.01 | 0.824293 | 8.730046e-54 | 7.700095e-51 |
| MsG0380016864.01 | MsG0480023909.01 | 0.812500 | 4.110105e-51 | 2.617578e-48 |
| MsG0380016883.01 | MsG0480023909.01 | 0.805957 | 1.038786e-49 | 5.569596e-47 |
| MsG0380017087.01 | MsG0480023909.01 | 0.808864 | 2.511267e-50 | 1.451994e-47 |
| MsG0380017540.01 | MsG0480023909.01 | 0.835976 | 1.226260e-56 | 1.523945e-53 |
| MsG0380017663.01 | MsG0480023909.01 | 0.802409 | 5.686537e-49 | 2.783612e-46 |
| MsG0380017703.01 | MsG0480023909.01 | 0.848411 | 6.237425e-60 | 1.143698e-56 |
| MsG0380017728.01 | MsG0480023909.01 | 0.814705 | 1.344690e-51 | 9.087965e-49 |
| MsG0380017776.01 | MsG0480023909.01 | -0.822129 | 2.793499e-53 | 2.317651e-50 |
| MsG0380017785.01 | MsG0480023909.01 | 0.801206 | 1.004434e-48 | 4.768777e-46 |
| MsG0380018037.01 | MsG0480023909.01 | 0.800812 | 1.209172e-48 | 5.683631e-46 |
| MsG0380018044.01 | MsG0480023909.01 | 0.814884 | 1.227405e-51 | 8.335026e-49 |
| MsG0380018069.01 | MsG0480023909.01 | 0.818988 | 1.470077e-52 | 1.117403e-49 |
| MsG0480018091.01 | MsG0480023909.01 | -0.814433 | 1.544646e-51 | 1.036332e-48 |
| MsG0480018319.01 | MsG0480023909.01 | 0.830738 | 2.480147e-55 | 2.636193e-52 |
| MsG0280006593.01 | MsG0480023909.01 | 0.808928 | 2.433876e-50 | 1.409565e-47 |
| MsG0280006996.01 | MsG0480023909.01 | 0.808144 | 3.577166e-50 | 2.029660e-47 |
| MsG0280007062.01 | MsG0480023909.01 | 0.850429 | 1.708020e-60 | 3.344881e-57 |
| MsG0280007193.01 | MsG0480023909.01 | -0.845162 | 4.821981e-59 | 7.964614e-56 |
| MsG0280007883.01 | MsG0480023909.01 | 0.836791 | 7.608354e-57 | 9.690801e-54 |
| MsG0280008429.01 | MsG0480023909.01 | 0.800778 | 1.228653e-48 | 5.770268e-46 |
| MsG0280008928.01 | MsG0480023909.01 | 0.839530 | 1.499620e-57 | 2.076653e-54 |
| MsG0280009685.01 | MsG0480023909.01 | 0.822997 | 1.755681e-53 | 1.493042e-50 |
| MsG0280009981.01 | MsG0480023909.01 | -0.800826 | 1.201323e-48 | 5.648842e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480023909.01.T01 | MTR_8g104740 | 98.182 | 55 | 1 | 0 | 41 | 95 | 399 | 453 | 3.67e-31 | 114 |
| MsG0480023909.01.T01 | MTR_4g120810 | 100.000 | 55 | 0 | 0 | 41 | 95 | 609 | 663 | 5.26e-31 | 114 |
| MsG0480023909.01.T01 | MTR_8g104740 | 98.182 | 55 | 1 | 0 | 41 | 95 | 611 | 665 | 1.98e-30 | 112 |
| MsG0480023909.01.T01 | MTR_4g052070 | 96.364 | 55 | 2 | 0 | 41 | 95 | 589 | 643 | 5.86e-30 | 111 |
| MsG0480023909.01.T01 | MTR_1g113700 | 85.484 | 62 | 2 | 1 | 41 | 95 | 548 | 609 | 1.81e-27 | 104 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480023909.01.T01 | AT4G33760 | 83.636 | 55 | 9 | 0 | 41 | 95 | 473 | 527 | 6.46e-27 | 102 |
| MsG0480023909.01.T01 | AT4G33760 | 83.636 | 55 | 9 | 0 | 41 | 95 | 609 | 663 | 8.52e-27 | 102 |
Find 23 sgRNAs with CRISPR-Local
Find 62 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCAGGCTGAAGCTAAGTT+TGG | 0.318198 | 4:-91145099 | MsG0480023909.01.T01:CDS |
| TGAAAGATCTTTCAGCTGTT+GGG | 0.361402 | 4:+91144209 | None:intergenic |
| AATGCAGGAGGCATAGCTTT+TGG | 0.364469 | 4:-91144348 | MsG0480023909.01.T01:CDS |
| AGATTGGTTATGTTGCTAGC+TGG | 0.406190 | 4:-91144318 | MsG0480023909.01.T01:CDS |
| GATTGGTTATGTTGCTAGCT+GGG | 0.406860 | 4:-91144317 | MsG0480023909.01.T01:CDS |
| TTGAAAGATCTTTCAGCTGT+TGG | 0.431611 | 4:+91144208 | None:intergenic |
| TAGCTGGGGCTAATTCAATC+AGG | 0.434319 | 4:-91144302 | MsG0480023909.01.T01:CDS |
| ATTATTTATATATCAAATGC+AGG | 0.486124 | 4:-91144363 | MsG0480023909.01.T01:CDS |
| GAAAGATCTTTCAGCTGTTG+GGG | 0.499570 | 4:+91144210 | None:intergenic |
| TTCTTGAAGCTCTTGACATG+GGG | 0.505034 | 4:-91145071 | MsG0480023909.01.T01:CDS |
| CTTCTTGAAGCTCTTGACAT+GGG | 0.540430 | 4:-91145072 | MsG0480023909.01.T01:CDS |
| CAGCTGTTGGGGATCCACCT+CGG | 0.573724 | 4:+91144221 | None:intergenic |
| TCTTCTTGAAGCTCTTGACA+TGG | 0.595100 | 4:-91145073 | MsG0480023909.01.T01:CDS |
| CCTCGGAAGGTGATCTCGTG+AGG | 0.598148 | 4:+91144238 | None:intergenic |
| TGTTGGGGATCCACCTCGGA+AGG | 0.606271 | 4:+91144225 | None:intergenic |
| ATTGGTTATGTTGCTAGCTG+GGG | 0.606846 | 4:-91144316 | MsG0480023909.01.T01:CDS |
| CACGAGATCACCTTCCGAGG+TGG | 0.609144 | 4:-91144235 | MsG0480023909.01.T01:CDS |
| AGCTGGGGCTAATTCAATCA+GGG | 0.612567 | 4:-91144301 | MsG0480023909.01.T01:CDS |
| TCTTGAAGCTCTTGACATGG+GGG | 0.620703 | 4:-91145070 | MsG0480023909.01.T01:CDS |
| CTCGGAAGGTGATCTCGTGA+GGG | 0.643918 | 4:+91144239 | None:intergenic |
| TTAGAAGACTTACCATGTGG+CGG | 0.647061 | 4:+91145045 | None:intergenic |
| CCTCACGAGATCACCTTCCG+AGG | 0.653984 | 4:-91144238 | MsG0480023909.01.T01:CDS |
| ATTTATATATCAAATGCAGG+AGG | 0.679862 | 4:-91144360 | MsG0480023909.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATTTATATATCAAATGC+AGG | - | Chr4:91144950-91144969 | MsG0480023909.01.T01:intron | 15.0% |
| !!! | TTATCAAGTTGAAATTTAAT+TGG | - | Chr4:91144838-91144857 | MsG0480023909.01.T01:intron | 15.0% |
| !! | CTTCAATAAATAAAGAAAAC+TGG | + | Chr4:91144393-91144412 | None:intergenic | 20.0% |
| !!! | TGCATTATAATTTCTTTTTC+AGG | - | Chr4:91144198-91144217 | MsG0480023909.01.T01:CDS | 20.0% |
| ! | ATTTATATATCAAATGCAGG+AGG | - | Chr4:91144953-91144972 | MsG0480023909.01.T01:intron | 25.0% |
| !! | AGTTCAAGCAATTTTATTGA+AGG | - | Chr4:91144670-91144689 | MsG0480023909.01.T01:intron | 25.0% |
| !! | TGAAATGTTTTCAGTTTAGT+GGG | + | Chr4:91144801-91144820 | None:intergenic | 25.0% |
| !! | TTGAAATGTTTTCAGTTTAG+TGG | + | Chr4:91144802-91144821 | None:intergenic | 25.0% |
| !!! | ATTTGCTATTATCACTAATG+CGG | - | Chr4:91144524-91144543 | MsG0480023909.01.T01:intron | 25.0% |
| AATGATCACAACACAATCAA+TGG | - | Chr4:91144500-91144519 | MsG0480023909.01.T01:intron | 30.0% | |
| ACTTAGTGAATAGAATGATG+TGG | - | Chr4:91144700-91144719 | MsG0480023909.01.T01:intron | 30.0% | |
| ATAATCCAGTTTATCGACAA+GGG | + | Chr4:91144316-91144335 | None:intergenic | 30.0% | |
| TGATCCTGAAAACATGTATA+TGG | - | Chr4:91144564-91144583 | MsG0480023909.01.T01:intron | 30.0% | |
| ! | ATTGCCATATACATGTTTTC+AGG | + | Chr4:91144571-91144590 | None:intergenic | 30.0% |
| !! | ATTTTAGAAGACTTACCATG+TGG | + | Chr4:91144274-91144293 | None:intergenic | 30.0% |
| !! | CTGTAGCTTTAACATAAGTT+TGG | + | Chr4:91144633-91144652 | None:intergenic | 30.0% |
| !! | TTTGCTATTATCACTAATGC+GGG | - | Chr4:91144525-91144544 | MsG0480023909.01.T01:intron | 30.0% |
| AGCATTTATCACTAACTGCA+AGG | - | Chr4:91144414-91144433 | MsG0480023909.01.T01:intron | 35.0% | |
| GATAATCCAGTTTATCGACA+AGG | + | Chr4:91144317-91144336 | None:intergenic | 35.0% | |
| TGAAAGATCTTTCAGCTGTT+GGG | + | Chr4:91145107-91145126 | None:intergenic | 35.0% | |
| TTGAAAGATCTTTCAGCTGT+TGG | + | Chr4:91145108-91145127 | None:intergenic | 35.0% | |
| ! | AGCACTACTCTAAAAACATG+AGG | - | Chr4:91144875-91144894 | MsG0480023909.01.T01:intron | 35.0% |
| ! | TGTTTTCAGTTTAGTGGGAA+TGG | + | Chr4:91144796-91144815 | None:intergenic | 35.0% |
| !!! | ACTGTGCAGTTGTTGTTTTT+GGG | + | Chr4:91145051-91145070 | None:intergenic | 35.0% |
| ATTGGTTATGTTGCTAGCTG+GGG | - | Chr4:91144997-91145016 | MsG0480023909.01.T01:intron | 40.0% | |
| CATATCGAGGAAAGGGAAAA+AGG | - | Chr4:91144367-91144386 | MsG0480023909.01.T01:CDS | 40.0% | |
| CTTCTTGAAGCTCTTGACAT+GGG | - | Chr4:91144241-91144260 | MsG0480023909.01.T01:CDS | 40.0% | |
| GAAAGATCTTTCAGCTGTTG+GGG | + | Chr4:91145106-91145125 | None:intergenic | 40.0% | |
| TATCACTAACTGCAAGGTAG+TGG | - | Chr4:91144420-91144439 | MsG0480023909.01.T01:intron | 40.0% | |
| TCTTCTTGAAGCTCTTGACA+TGG | - | Chr4:91144240-91144259 | MsG0480023909.01.T01:CDS | 40.0% | |
| TTAGAAGACTTACCATGTGG+CGG | + | Chr4:91144271-91144290 | None:intergenic | 40.0% | |
| TTCTTGAAGCTCTTGACATG+GGG | - | Chr4:91144242-91144261 | MsG0480023909.01.T01:CDS | 40.0% | |
| TTTATCGACAAGGGAGGAAT+GGG | + | Chr4:91144307-91144326 | None:intergenic | 40.0% | |
| TTTCAGGCTGAAGCTAAGTT+TGG | - | Chr4:91144214-91144233 | MsG0480023909.01.T01:CDS | 40.0% | |
| ! | AGATTGGTTATGTTGCTAGC+TGG | - | Chr4:91144995-91145014 | MsG0480023909.01.T01:intron | 40.0% |
| ! | CTTTTTCCCTTTCCTCGATA+TGG | + | Chr4:91144369-91144388 | None:intergenic | 40.0% |
| ! | GATTGGTTATGTTGCTAGCT+GGG | - | Chr4:91144996-91145015 | MsG0480023909.01.T01:intron | 40.0% |
| !!! | CACTGTGCAGTTGTTGTTTT+TGG | + | Chr4:91145052-91145071 | None:intergenic | 40.0% |
| AGCTGGGGCTAATTCAATCA+GGG | - | Chr4:91145012-91145031 | MsG0480023909.01.T01:intron | 45.0% | |
| ATCCAGTTTATCGACAAGGG+AGG | + | Chr4:91144313-91144332 | None:intergenic | 45.0% | |
| GCACAACCATATCGAGGAAA+GGG | - | Chr4:91144360-91144379 | MsG0480023909.01.T01:CDS | 45.0% | |
| GTTTATCGACAAGGGAGGAA+TGG | + | Chr4:91144308-91144327 | None:intergenic | 45.0% | |
| TAGCTGGGGCTAATTCAATC+AGG | - | Chr4:91145011-91145030 | MsG0480023909.01.T01:intron | 45.0% | |
| TCAGGATCAGCGTTAATACG+TGG | + | Chr4:91144553-91144572 | None:intergenic | 45.0% | |
| TCTTGAAGCTCTTGACATGG+GGG | - | Chr4:91144243-91144262 | MsG0480023909.01.T01:CDS | 45.0% | |
| TGCACAACCATATCGAGGAA+AGG | - | Chr4:91144359-91144378 | MsG0480023909.01.T01:CDS | 45.0% | |
| TTATCGACAAGGGAGGAATG+GGG | + | Chr4:91144306-91144325 | None:intergenic | 45.0% | |
| TTCCTCCCTTGTCGATAAAC+TGG | - | Chr4:91144308-91144327 | MsG0480023909.01.T01:CDS | 45.0% | |
| ! | AGCTTTTGGTCTGGACAGAT+TGG | - | Chr4:91144979-91144998 | MsG0480023909.01.T01:intron | 45.0% |
| ! | AGGTAGTGGCAGTTTAGACA+AGG | - | Chr4:91144434-91144453 | MsG0480023909.01.T01:intron | 45.0% |
| ! | GGTAGTGGCAGTTTAGACAA+GGG | - | Chr4:91144435-91144454 | MsG0480023909.01.T01:intron | 45.0% |
| !! | AATGCAGGAGGCATAGCTTT+TGG | - | Chr4:91144965-91144984 | MsG0480023909.01.T01:intron | 45.0% |
| AAAGCTACAGCTGCAGAGAC+AGG | - | Chr4:91144643-91144662 | MsG0480023909.01.T01:intron | 50.0% | |
| GTCTGTGCACAACCATATCG+AGG | - | Chr4:91144354-91144373 | MsG0480023909.01.T01:CDS | 50.0% | |
| !! | AGGAGGCATAGCTTTTGGTC+TGG | - | Chr4:91144970-91144989 | MsG0480023909.01.T01:intron | 50.0% |
| CTCGGAAGGTGATCTCGTGA+GGG | + | Chr4:91145077-91145096 | None:intergenic | 55.0% | |
| CACGAGATCACCTTCCGAGG+TGG | - | Chr4:91145078-91145097 | MsG0480023909.01.T01:CDS | 60.0% | |
| CAGCTGTTGGGGATCCACCT+CGG | + | Chr4:91145095-91145114 | None:intergenic | 60.0% | |
| CCTCACGAGATCACCTTCCG+AGG | - | Chr4:91145075-91145094 | MsG0480023909.01.T01:CDS | 60.0% | |
| CCTCGGAAGGTGATCTCGTG+AGG | + | Chr4:91145078-91145097 | None:intergenic | 60.0% | |
| TGTTGGGGATCCACCTCGGA+AGG | + | Chr4:91145091-91145110 | None:intergenic | 60.0% | |
| GACATGGGGGCTCCGCCACA+TGG | - | Chr4:91144256-91144275 | MsG0480023909.01.T01:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 91144197 | 91145138 | 91144197 | ID=MsG0480023909.01;Name=MsG0480023909.01 |
| Chr4 | mRNA | 91144197 | 91145138 | 91144197 | ID=MsG0480023909.01.T01;Parent=MsG0480023909.01;Name=MsG0480023909.01.T01;_AED=0.49;_eAED=0.60;_QI=0|0|0|1|0|0.5|2|0|95 |
| Chr4 | exon | 91145058 | 91145138 | 91145058 | ID=MsG0480023909.01.T01:exon:5129;Parent=MsG0480023909.01.T01 |
| Chr4 | exon | 91144197 | 91144403 | 91144197 | ID=MsG0480023909.01.T01:exon:5128;Parent=MsG0480023909.01.T01 |
| Chr4 | CDS | 91145058 | 91145138 | 91145058 | ID=MsG0480023909.01.T01:cds;Parent=MsG0480023909.01.T01 |
| Chr4 | CDS | 91144197 | 91144403 | 91144197 | ID=MsG0480023909.01.T01:cds;Parent=MsG0480023909.01.T01 |
| Gene Sequence |
| Protein sequence |
