Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580025369.01.T01 | KEH27680.1 | 99.471 | 189 | 1 | 0 | 29 | 217 | 9 | 197 | 1.08E-138 | 396 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580025369.01.T01 | Q9FHI1 | 93.085 | 188 | 13 | 0 | 29 | 216 | 25 | 212 | 5.04E-133 | 375 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580025369.01.T01 | A0A445M3H0 | 98.404 | 188 | 3 | 0 | 29 | 216 | 496 | 683 | 2.09e-134 | 402 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048773.01 | MsG0580025369.01 | -0.813880 | 2.045609e-51 | 1.352009e-48 |
| MsG0080048849.01 | MsG0580025369.01 | -0.813667 | 2.278958e-51 | 1.497568e-48 |
| MsG0080048878.01 | MsG0580025369.01 | -0.864991 | 8.160794e-65 | 2.613448e-61 |
| MsG0080049068.01 | MsG0580025369.01 | -0.835314 | 1.803842e-56 | 2.197902e-53 |
| MsG0080049069.01 | MsG0580025369.01 | -0.825471 | 4.604514e-54 | 4.200635e-51 |
| MsG0180000010.01 | MsG0580025369.01 | 0.802720 | 4.907180e-49 | 2.421161e-46 |
| MsG0180000218.01 | MsG0580025369.01 | 0.819619 | 1.055882e-52 | 8.166123e-50 |
| MsG0180000355.01 | MsG0580025369.01 | -0.864009 | 1.654812e-64 | 5.117578e-61 |
| MsG0180000534.01 | MsG0580025369.01 | -0.810100 | 1.363051e-50 | 8.144080e-48 |
| MsG0180000544.01 | MsG0580025369.01 | 0.802759 | 4.816961e-49 | 2.379001e-46 |
| MsG0180001002.01 | MsG0580025369.01 | -0.805827 | 1.106101e-49 | 5.910730e-47 |
| MsG0180001356.01 | MsG0580025369.01 | -0.808452 | 3.076277e-50 | 1.759655e-47 |
| MsG0180001610.01 | MsG0580025369.01 | -0.823876 | 1.093643e-53 | 9.534436e-51 |
| MsG0180002700.01 | MsG0580025369.01 | -0.803776 | 2.966551e-49 | 1.503747e-46 |
| MsG0180003353.01 | MsG0580025369.01 | -0.866325 | 3.095964e-65 | 1.039379e-61 |
| MsG0180003697.01 | MsG0580025369.01 | -0.812766 | 3.594229e-51 | 2.305012e-48 |
| MsG0180003767.01 | MsG0580025369.01 | 0.867296 | 1.519353e-65 | 5.277994e-62 |
| MsG0180003821.01 | MsG0580025369.01 | -0.840714 | 7.362773e-58 | 1.057762e-54 |
| MsG0180003885.01 | MsG0580025369.01 | -0.815257 | 1.014452e-51 | 6.959005e-49 |
| MsG0180003942.01 | MsG0580025369.01 | 0.815870 | 7.407403e-52 | 5.167645e-49 |
| MsG0180004046.01 | MsG0580025369.01 | -0.803860 | 2.848956e-49 | 1.447329e-46 |
| MsG0180004276.01 | MsG0580025369.01 | -0.804040 | 2.614783e-49 | 1.334492e-46 |
| MsG0180004448.01 | MsG0580025369.01 | -0.801176 | 1.018733e-48 | 4.833127e-46 |
| MsG0180004466.01 | MsG0580025369.01 | -0.801574 | 8.444939e-49 | 4.046802e-46 |
| MsG0180004493.01 | MsG0580025369.01 | -0.865970 | 4.012157e-65 | 1.330174e-61 |
| MsG0180004605.01 | MsG0580025369.01 | 0.851357 | 9.353790e-61 | 1.888547e-57 |
| MsG0180004750.01 | MsG0580025369.01 | -0.834472 | 2.939166e-56 | 3.491670e-53 |
| MsG0180004759.01 | MsG0580025369.01 | 0.824935 | 6.162109e-54 | 5.537049e-51 |
| MsG0180005001.01 | MsG0580025369.01 | 0.805870 | 1.083417e-49 | 5.795974e-47 |
| MsG0180005153.01 | MsG0580025369.01 | -0.813769 | 2.164818e-51 | 1.426404e-48 |
| MsG0180005169.01 | MsG0580025369.01 | -0.830665 | 2.584469e-55 | 2.741130e-52 |
| MsG0180006031.01 | MsG0580025369.01 | -0.821710 | 3.493536e-53 | 2.864060e-50 |
| MsG0180006096.01 | MsG0580025369.01 | -0.808267 | 3.369048e-50 | 1.917794e-47 |
| MsG0180006267.01 | MsG0580025369.01 | 0.820098 | 8.207420e-53 | 6.433956e-50 |
| MsG0280006306.01 | MsG0580025369.01 | 0.880816 | 4.017613e-70 | 2.298158e-66 |
| MsG0280006418.01 | MsG0580025369.01 | 0.847487 | 1.120880e-59 | 1.995477e-56 |
| MsG0280010564.01 | MsG0580025369.01 | -0.806569 | 7.719213e-50 | 4.203816e-47 |
| MsG0280010604.01 | MsG0580025369.01 | 0.841512 | 4.541936e-58 | 6.689370e-55 |
| MsG0280011048.01 | MsG0580025369.01 | 0.823111 | 1.651014e-53 | 1.408603e-50 |
| MsG0280011059.01 | MsG0580025369.01 | 0.834956 | 2.220754e-56 | 2.676750e-53 |
| MsG0280011440.01 | MsG0580025369.01 | 0.810017 | 1.420470e-50 | 8.469007e-48 |
| MsG0380011844.01 | MsG0580025369.01 | -0.816657 | 4.939683e-52 | 3.521314e-49 |
| MsG0380013295.01 | MsG0580025369.01 | 0.856592 | 2.899032e-62 | 6.955224e-59 |
| MsG0380013794.01 | MsG0580025369.01 | 0.810210 | 1.290948e-50 | 7.734655e-48 |
| MsG0380014225.01 | MsG0580025369.01 | 0.860899 | 1.496701e-63 | 4.156312e-60 |
| MsG0480018584.01 | MsG0580025369.01 | -0.831135 | 1.982191e-55 | 2.131677e-52 |
| MsG0480018644.01 | MsG0580025369.01 | -0.800280 | 1.551996e-48 | 7.197706e-46 |
| MsG0480018850.01 | MsG0580025369.01 | -0.839340 | 1.680253e-57 | 2.313478e-54 |
| MsG0480018911.01 | MsG0580025369.01 | -0.853485 | 2.316855e-61 | 5.013806e-58 |
| MsG0480019148.01 | MsG0580025369.01 | -0.814120 | 1.811568e-51 | 1.205080e-48 |
| MsG0480019689.01 | MsG0580025369.01 | 0.811501 | 6.784229e-51 | 4.206652e-48 |
| MsG0480020024.01 | MsG0580025369.01 | -0.811419 | 7.067525e-51 | 4.372705e-48 |
| MsG0480020025.01 | MsG0580025369.01 | -0.803721 | 3.045106e-49 | 1.541372e-46 |
| MsG0480020690.01 | MsG0580025369.01 | -0.839631 | 1.411698e-57 | 1.961092e-54 |
| MsG0480020890.01 | MsG0580025369.01 | -0.811001 | 8.708980e-51 | 5.329777e-48 |
| MsG0480020935.01 | MsG0580025369.01 | 0.851875 | 6.672580e-61 | 1.369358e-57 |
| MsG0480021153.01 | MsG0580025369.01 | 0.818369 | 2.032322e-52 | 1.518475e-49 |
| MsG0480021201.01 | MsG0580025369.01 | -0.815478 | 9.055988e-52 | 6.251019e-49 |
| MsG0480021248.01 | MsG0580025369.01 | -0.803107 | 4.082663e-49 | 2.034142e-46 |
| MsG0480021768.01 | MsG0580025369.01 | -0.805346 | 1.395388e-49 | 7.364974e-47 |
| MsG0480021776.01 | MsG0580025369.01 | 0.852099 | 5.762790e-61 | 1.191305e-57 |
| MsG0480022149.01 | MsG0580025369.01 | -0.801626 | 8.240095e-49 | 3.953717e-46 |
| MsG0480022275.01 | MsG0580025369.01 | 0.900815 | 5.018913e-78 | 6.593609e-74 |
| MsG0480022781.01 | MsG0580025369.01 | 0.828089 | 1.091109e-54 | 1.073599e-51 |
| MsG0480022872.01 | MsG0580025369.01 | 0.862204 | 5.979736e-64 | 1.737104e-60 |
| MsG0480023073.01 | MsG0580025369.01 | -0.829711 | 4.418214e-55 | 4.558460e-52 |
| MsG0480023162.01 | MsG0580025369.01 | -0.800113 | 1.678229e-48 | 7.750000e-46 |
| MsG0480023261.01 | MsG0580025369.01 | -0.826376 | 2.806157e-54 | 2.627219e-51 |
| MsG0480023400.01 | MsG0580025369.01 | 0.817054 | 4.023664e-52 | 2.899659e-49 |
| MsG0480023660.01 | MsG0580025369.01 | -0.801491 | 8.782858e-49 | 4.199984e-46 |
| MsG0480023867.01 | MsG0580025369.01 | -0.805463 | 1.319092e-49 | 6.983299e-47 |
| MsG0480023909.01 | MsG0580025369.01 | -0.808617 | 2.836633e-50 | 1.629393e-47 |
| MsG0580024161.01 | MsG0580025369.01 | -0.809613 | 1.735405e-50 | 1.023740e-47 |
| MsG0580024619.01 | MsG0580025369.01 | -0.802508 | 5.425932e-49 | 2.662639e-46 |
| MsG0580024790.01 | MsG0580025369.01 | 0.880277 | 6.265270e-70 | 3.507591e-66 |
| MsG0580024930.01 | MsG0580025369.01 | 0.838948 | 2.122771e-57 | 2.887634e-54 |
| MsG0580024952.01 | MsG0580025369.01 | -0.809972 | 1.453031e-50 | 8.652441e-48 |
| MsG0580025047.01 | MsG0580025369.01 | 0.827720 | 1.338549e-54 | 1.302882e-51 |
| MsG0580025055.01 | MsG0580025369.01 | -0.845670 | 3.514282e-59 | 5.900877e-56 |
| MsG0580025182.01 | MsG0580025369.01 | 0.808049 | 3.749047e-50 | 2.121702e-47 |
| MsG0580025357.01 | MsG0580025369.01 | 0.808731 | 2.681116e-50 | 1.544688e-47 |
| MsG0580025369.01 | MsG0580025407.01 | 0.824991 | 5.979270e-54 | 5.381378e-51 |
| MsG0580025369.01 | MsG0580025561.01 | 0.817757 | 2.794966e-52 | 2.053344e-49 |
| MsG0580025369.01 | MsG0580025627.01 | -0.822740 | 2.015135e-53 | 1.701329e-50 |
| MsG0580025369.01 | MsG0580026159.01 | 0.851869 | 6.700088e-61 | 1.374684e-57 |
| MsG0580025369.01 | MsG0580026175.01 | -0.812753 | 3.616753e-51 | 2.318737e-48 |
| MsG0580025369.01 | MsG0580027103.01 | -0.802054 | 6.730118e-49 | 3.264660e-46 |
| MsG0580025369.01 | MsG0580027394.01 | -0.816748 | 4.712644e-52 | 3.367733e-49 |
| MsG0580025369.01 | MsG0580028232.01 | 0.824404 | 8.221595e-54 | 7.274631e-51 |
| MsG0580025369.01 | MsG0580028235.01 | 0.817481 | 3.225261e-52 | 2.351621e-49 |
| MsG0580025369.01 | MsG0580028407.01 | -0.831048 | 2.081264e-55 | 2.232549e-52 |
| MsG0580025369.01 | MsG0580028613.01 | 0.809192 | 2.136289e-50 | 1.246114e-47 |
| MsG0580025369.01 | MsG0580028630.01 | -0.857507 | 1.556882e-62 | 3.851528e-59 |
| MsG0580025369.01 | MsG0580029039.01 | -0.804055 | 2.595358e-49 | 1.325149e-46 |
| MsG0580025369.01 | MsG0580029522.01 | 0.809767 | 1.608305e-50 | 9.526060e-48 |
| MsG0580025369.01 | MsG0680030356.01 | 0.815425 | 9.304768e-52 | 6.412943e-49 |
| MsG0580025369.01 | MsG0680030515.01 | -0.805666 | 1.195476e-49 | 6.362008e-47 |
| MsG0580025369.01 | MsG0680031010.01 | -0.803636 | 3.170822e-49 | 1.601551e-46 |
| MsG0580025369.01 | MsG0680031264.01 | -0.838706 | 2.452662e-57 | 3.312317e-54 |
| MsG0580025369.01 | MsG0680031333.01 | 0.802534 | 5.361442e-49 | 2.632646e-46 |
| MsG0580025369.01 | MsG0680031621.01 | -0.824172 | 9.319711e-54 | 8.192833e-51 |
| MsG0580025369.01 | MsG0680031939.01 | -0.832310 | 1.017010e-55 | 1.132247e-52 |
| MsG0580025369.01 | MsG0680032473.01 | 0.812341 | 4.451660e-51 | 2.823137e-48 |
| MsG0580025369.01 | MsG0680032830.01 | -0.810946 | 8.951194e-51 | 5.469923e-48 |
| MsG0580025369.01 | MsG0680033377.01 | -0.846351 | 2.293762e-59 | 3.937027e-56 |
| MsG0580025369.01 | MsG0680035877.01 | -0.813409 | 2.597500e-51 | 1.694988e-48 |
| MsG0580025369.01 | MsG0780036347.01 | 0.824283 | 8.777781e-54 | 7.739949e-51 |
| MsG0580025369.01 | MsG0780036385.01 | -0.809093 | 2.244030e-50 | 1.305449e-47 |
| MsG0580025369.01 | MsG0780036396.01 | 0.806424 | 8.281992e-50 | 4.493578e-47 |
| MsG0580025369.01 | MsG0780036486.01 | -0.830732 | 2.488677e-55 | 2.644846e-52 |
| MsG0580025369.01 | MsG0780036659.01 | -0.811324 | 7.412603e-51 | 4.574379e-48 |
| MsG0580025369.01 | MsG0780036711.01 | -0.803473 | 3.428490e-49 | 1.724427e-46 |
| MsG0580025369.01 | MsG0780037093.01 | -0.816209 | 6.223660e-52 | 4.382560e-49 |
| MsG0580025369.01 | MsG0780037395.01 | -0.801293 | 9.641514e-49 | 4.587694e-46 |
| MsG0580025369.01 | MsG0780038309.01 | 0.802676 | 5.011048e-49 | 2.469525e-46 |
| MsG0580025369.01 | MsG0780038584.01 | 0.845199 | 4.713589e-59 | 7.794878e-56 |
| MsG0580025369.01 | MsG0780038598.01 | 0.826325 | 2.886753e-54 | 2.698503e-51 |
| MsG0580025369.01 | MsG0780038744.01 | -0.810695 | 1.014427e-50 | 6.157018e-48 |
| MsG0580025369.01 | MsG0780038784.01 | -0.824619 | 7.319218e-54 | 6.517825e-51 |
| MsG0580025369.01 | MsG0780039369.01 | -0.803846 | 2.867956e-49 | 1.456495e-46 |
| MsG0580025369.01 | MsG0780040295.01 | 0.813767 | 2.167017e-51 | 1.427761e-48 |
| MsG0580025369.01 | MsG0780040430.01 | -0.804434 | 2.164235e-49 | 1.115750e-46 |
| MsG0580025369.01 | MsG0780040939.01 | 0.821988 | 3.011902e-53 | 2.488707e-50 |
| MsG0580025369.01 | MsG0780041391.01 | -0.804714 | 1.892281e-49 | 9.826447e-47 |
| MsG0580025369.01 | MsG0780041440.01 | -0.811725 | 6.062769e-51 | 3.781555e-48 |
| MsG0580025369.01 | MsG0780041729.01 | 0.827614 | 1.419200e-54 | 1.376962e-51 |
| MsG0580025369.01 | MsG0780041734.01 | 0.802471 | 5.524107e-49 | 2.708214e-46 |
| MsG0580025369.01 | MsG0780041747.01 | -0.808840 | 2.541861e-50 | 1.468671e-47 |
| MsG0580025369.01 | MsG0880041947.01 | -0.812956 | 3.266362e-51 | 2.105194e-48 |
| MsG0580025369.01 | MsG0880044005.01 | -0.817470 | 3.242579e-52 | 2.363671e-49 |
| MsG0580025369.01 | MsG0880044036.01 | -0.801405 | 9.146674e-49 | 4.364390e-46 |
| MsG0580025369.01 | MsG0880044142.01 | -0.826043 | 3.368709e-54 | 3.123918e-51 |
| MsG0580025369.01 | MsG0880044487.01 | -0.815493 | 8.988541e-52 | 6.206813e-49 |
| MsG0580025369.01 | MsG0880044611.01 | 0.822744 | 2.010781e-53 | 1.697841e-50 |
| MsG0580025369.01 | MsG0880045010.01 | 0.873554 | 1.343619e-67 | 5.855992e-64 |
| MsG0580025369.01 | MsG0880045548.01 | 0.870083 | 1.906957e-66 | 7.323601e-63 |
| MsG0580025369.01 | MsG0880045722.01 | -0.811644 | 6.315241e-51 | 3.930231e-48 |
| MsG0580025369.01 | MsG0880046599.01 | 0.808127 | 3.608232e-50 | 2.046281e-47 |
| MsG0580025369.01 | MsG0880046765.01 | -0.828127 | 1.068483e-54 | 1.052482e-51 |
| MsG0580025369.01 | MsG0880046825.01 | 0.811330 | 7.390893e-51 | 4.561632e-48 |
| MsG0580025369.01 | MsG0880046867.01 | -0.826804 | 2.219030e-54 | 2.102836e-51 |
| MsG0580025369.01 | MsG0880047422.01 | 0.850209 | 1.968735e-60 | 3.827599e-57 |
| MsG0580025369.01 | MsG0880047703.01 | -0.816114 | 6.534557e-52 | 4.589516e-49 |
| MsG0580025369.01 | MsG0880047754.01 | -0.802782 | 4.764307e-49 | 2.354442e-46 |
| MsG0380015066.01 | MsG0580025369.01 | 0.849219 | 3.720970e-60 | 7.005543e-57 |
| MsG0380015784.01 | MsG0580025369.01 | -0.828734 | 7.625095e-55 | 7.643856e-52 |
| MsG0380015849.01 | MsG0580025369.01 | 0.837233 | 5.866183e-57 | 7.571472e-54 |
| MsG0380016191.01 | MsG0580025369.01 | 0.836325 | 9.999406e-57 | 1.256030e-53 |
| MsG0380016347.01 | MsG0580025369.01 | 0.897748 | 1.040055e-76 | 1.191898e-72 |
| MsG0380016619.01 | MsG0580025369.01 | 0.817254 | 3.627436e-52 | 2.628302e-49 |
| MsG0380016671.01 | MsG0580025369.01 | -0.852684 | 3.928155e-61 | 8.273568e-58 |
| MsG0380016820.01 | MsG0580025369.01 | -0.818286 | 2.122345e-52 | 1.581932e-49 |
| MsG0380017087.01 | MsG0580025369.01 | -0.809506 | 1.829278e-50 | 1.075972e-47 |
| MsG0380017094.01 | MsG0580025369.01 | 0.842002 | 3.372396e-58 | 5.043430e-55 |
| MsG0380017293.01 | MsG0580025369.01 | -0.808365 | 3.210435e-50 | 1.832233e-47 |
| MsG0380017878.01 | MsG0580025369.01 | 0.822713 | 2.044998e-53 | 1.725102e-50 |
| MsG0380017891.01 | MsG0580025369.01 | 0.825282 | 5.103830e-54 | 4.631514e-51 |
| MsG0380018037.01 | MsG0580025369.01 | -0.813686 | 2.257412e-51 | 1.484158e-48 |
| MsG0480018091.01 | MsG0580025369.01 | 0.864087 | 1.564691e-64 | 4.852405e-61 |
| MsG0280006526.01 | MsG0580025369.01 | 0.818387 | 2.013446e-52 | 1.505104e-49 |
| MsG0280006711.01 | MsG0580025369.01 | 0.825988 | 3.470526e-54 | 3.213453e-51 |
| MsG0280006996.01 | MsG0580025369.01 | -0.809309 | 2.016271e-50 | 1.179744e-47 |
| MsG0280007062.01 | MsG0580025369.01 | -0.840115 | 1.056246e-57 | 1.489650e-54 |
| MsG0280007165.01 | MsG0580025369.01 | 0.824742 | 6.843331e-54 | 6.115617e-51 |
| MsG0280007193.01 | MsG0580025369.01 | 0.862717 | 4.159361e-64 | 1.230001e-60 |
| MsG0280007575.01 | MsG0580025369.01 | -0.800050 | 1.728637e-48 | 7.970005e-46 |
| MsG0280007647.01 | MsG0580025369.01 | -0.807362 | 5.244985e-50 | 2.915571e-47 |
| MsG0280007903.01 | MsG0580025369.01 | -0.812686 | 3.741867e-51 | 2.394794e-48 |
| MsG0280008304.01 | MsG0580025369.01 | 0.818915 | 1.527471e-52 | 1.158640e-49 |
| MsG0280008307.01 | MsG0580025369.01 | 0.811768 | 5.935291e-51 | 3.706064e-48 |
| MsG0280008394.01 | MsG0580025369.01 | -0.802083 | 6.637163e-49 | 3.221981e-46 |
| MsG0280008660.01 | MsG0580025369.01 | 0.833651 | 4.718726e-56 | 5.468722e-53 |
| MsG0280008928.01 | MsG0580025369.01 | -0.870590 | 1.301296e-66 | 5.089323e-63 |
| MsG0280008929.01 | MsG0580025369.01 | -0.843421 | 1.416318e-58 | 2.214859e-55 |
| MsG0280009256.01 | MsG0580025369.01 | -0.820996 | 5.106609e-53 | 4.104144e-50 |
| MsG0280009685.01 | MsG0580025369.01 | -0.854549 | 1.143210e-61 | 2.562422e-58 |
| MsG0280009981.01 | MsG0580025369.01 | 0.806925 | 6.490593e-50 | 3.567255e-47 |
| MsG0280010532.01 | MsG0580025369.01 | 0.802920 | 4.461478e-49 | 2.212460e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580025369.01.T01 | MTR_5g027160 | 99.471 | 189 | 1 | 0 | 29 | 217 | 9 | 197 | 1.31e-142 | 396 |
| MsG0580025369.01.T01 | MTR_5g027160 | 99.471 | 189 | 1 | 0 | 29 | 217 | 25 | 213 | 1.66e-142 | 396 |
| MsG0580025369.01.T01 | MTR_2g041600 | 87.234 | 188 | 24 | 0 | 29 | 216 | 26 | 213 | 1.26e-127 | 359 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580025369.01.T01 | AT5G45550 | 93.085 | 188 | 13 | 0 | 29 | 216 | 25 | 212 | 5.14e-134 | 375 |
| MsG0580025369.01.T01 | AT4G19045 | 93.085 | 188 | 13 | 0 | 29 | 216 | 25 | 212 | 3.54e-132 | 370 |
| MsG0580025369.01.T01 | AT5G20440 | 62.234 | 188 | 68 | 3 | 30 | 216 | 29 | 214 | 8.45e-87 | 256 |
| MsG0580025369.01.T01 | AT5G20430 | 62.698 | 126 | 41 | 2 | 91 | 216 | 1 | 120 | 1.03e-55 | 173 |
Find 67 sgRNAs with CRISPR-Local
Find 247 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCATTTCCTGCCAACTTTA+AGG | 0.054380 | 5:+17562945 | MsG0580025369.01.T01:CDS |
| TAAGATTATCACTTTATTAT+TGG | 0.145416 | 5:-17563598 | None:intergenic |
| ATTCAACATTTAATATATTA+TGG | 0.220288 | 5:-17563263 | None:intergenic |
| ACCAAGCTTCTGAGGGAATA+TGG | 0.247972 | 5:-17562829 | None:intergenic |
| TAATATATTAAATGTTGAAT+TGG | 0.261573 | 5:+17563266 | MsG0580025369.01.T01:exon |
| ATCTGTTGTGTTGAATAGTT+TGG | 0.290138 | 5:+17563383 | MsG0580025369.01.T01:three_prime_UTR |
| AAGTAAAACATTGGGATCTA+TGG | 0.307065 | 5:-17563474 | None:intergenic |
| GTTTGGGCTGATTGACAAAA+AGG | 0.310105 | 5:+17563210 | MsG0580025369.01.T01:CDS |
| ACTCTAGGTATGAGTATAGA+TGG | 0.331755 | 5:+17562709 | MsG0580025369.01.T01:intron |
| AAACACATTGATGCGACATT+AGG | 0.343649 | 5:+17561408 | MsG0580025369.01.T01:CDS |
| TTTACTTTAATTTAATGTAT+TGG | 0.351626 | 5:+17563490 | MsG0580025369.01.T01:three_prime_UTR |
| TCCTTAAAGTTGGCAGGAAA+TGG | 0.358892 | 5:-17562946 | None:intergenic |
| TCAGATGGGCCTCTTCTTTG+AGG | 0.381666 | 5:-17563047 | None:intergenic |
| AAAACATCAAACATGAAGTA+TGG | 0.384626 | 5:-17563535 | None:intergenic |
| AACCAGGTGAATCTGCTCTA+TGG | 0.388725 | 5:+17561669 | MsG0580025369.01.T01:CDS |
| AACACATTGATGCGACATTA+GGG | 0.403871 | 5:+17561409 | MsG0580025369.01.T01:CDS |
| AAAGTATGTAGAATATCTTA+TGG | 0.404082 | 5:+17562776 | MsG0580025369.01.T01:CDS |
| TTTGGAGCAGAAACCTCAAT+AGG | 0.410812 | 5:-17562756 | None:intergenic |
| ATAAGATATTCTACATACTT+TGG | 0.414597 | 5:-17562774 | None:intergenic |
| AATATATTAAATGTTGAATT+GGG | 0.415124 | 5:+17563267 | MsG0580025369.01.T01:exon |
| AAGTCTCAAATACATGCAAT+GGG | 0.431473 | 5:+17563448 | MsG0580025369.01.T01:three_prime_UTR |
| AGACATTGTGCGACAATTCT+CGG | 0.449230 | 5:-17561715 | None:intergenic |
| TTAAATTAAAGTAAAACATT+GGG | 0.453388 | 5:-17563482 | None:intergenic |
| ATGCGAGCTTTCTGTGATGA+AGG | 0.460178 | 5:-17563424 | None:intergenic |
| TTGTGAAATATCTTTATCCT+AGG | 0.466243 | 5:+17563307 | MsG0580025369.01.T01:three_prime_UTR |
| GCAAATTAAGAAACCTATTG+AGG | 0.466327 | 5:+17562743 | MsG0580025369.01.T01:CDS |
| GTGTTGAATAGTTTGGGAAC+AGG | 0.467008 | 5:+17563390 | MsG0580025369.01.T01:three_prime_UTR |
| AAAGTCTCAAATACATGCAA+TGG | 0.468965 | 5:+17563447 | MsG0580025369.01.T01:three_prime_UTR |
| ATTAAATTAAAGTAAAACAT+TGG | 0.470991 | 5:-17563483 | None:intergenic |
| TCTGTTGTGTTGAATAGTTT+GGG | 0.472925 | 5:+17563384 | MsG0580025369.01.T01:three_prime_UTR |
| TTCACAATTCACAGTAAGCC+TGG | 0.486253 | 5:-17563291 | None:intergenic |
| GACATTGTGCGACAATTCTC+GGG | 0.495014 | 5:-17561714 | None:intergenic |
| TCCATATTCCCTCAGAAGCT+TGG | 0.496080 | 5:+17562828 | MsG0580025369.01.T01:CDS |
| ACGACATCCTTAAAGTTGGC+AGG | 0.500857 | 5:-17562952 | None:intergenic |
| TTAAATGTTGAATTGGGACC+AGG | 0.510889 | 5:+17563273 | MsG0580025369.01.T01:exon |
| CTTCACGACATCCTTAAAGT+TGG | 0.514146 | 5:-17562956 | None:intergenic |
| AAGTATTTACCAAGCTTCTG+AGG | 0.529658 | 5:-17562837 | None:intergenic |
| ATGTAGAATATCTTATGGAC+TGG | 0.538976 | 5:+17562781 | MsG0580025369.01.T01:CDS |
| GAAGCTGTAAAGCTACCTCC+CGG | 0.542561 | 5:+17561447 | MsG0580025369.01.T01:CDS |
| CCACTCATTCAAATCCTCCC+CGG | 0.543359 | 5:-17561466 | None:intergenic |
| TGTTGAATAGTTTGGGAACA+GGG | 0.545940 | 5:+17563391 | MsG0580025369.01.T01:three_prime_UTR |
| TGCGAGCTTTCTGTGATGAA+GGG | 0.551777 | 5:-17563423 | None:intergenic |
| TATGAGTATAGATGGGCAGA+TGG | 0.555205 | 5:+17562717 | MsG0580025369.01.T01:CDS |
| AATTGTCGCACAATGTCTGC+AGG | 0.560455 | 5:+17561720 | MsG0580025369.01.T01:CDS |
| CACTCATTCAAATCCTCCCC+GGG | 0.561983 | 5:-17561465 | None:intergenic |
| CTCTAGGTATGAGTATAGAT+GGG | 0.572215 | 5:+17562710 | MsG0580025369.01.T01:intron |
| AAGCTGTAAAGCTACCTCCC+GGG | 0.575555 | 5:+17561448 | MsG0580025369.01.T01:CDS |
| AATTGTGAGCCTCAAAGAAG+AGG | 0.579374 | 5:+17563038 | MsG0580025369.01.T01:CDS |
| GCTTGAAGCATGTGTTCAGA+TGG | 0.579689 | 5:-17563062 | None:intergenic |
| TACAAAATGTTGTCAAATAG+CGG | 0.580653 | 5:+17559455 | MsG0580025369.01.T01:CDS |
| CCGGGGAGGATTTGAATGAG+TGG | 0.598805 | 5:+17561466 | MsG0580025369.01.T01:CDS |
| GTTTCTATAAGCTCTTGAAG+TGG | 0.602626 | 5:-17563241 | None:intergenic |
| CATTAGGGAGTGGAAATCTG+AGG | 0.608703 | 5:+17561424 | MsG0580025369.01.T01:CDS |
| TCGTGAAGACAATATTTAAG+CGG | 0.611671 | 5:+17562971 | MsG0580025369.01.T01:CDS |
| AGTATTTACCAAGCTTCTGA+GGG | 0.614054 | 5:-17562836 | None:intergenic |
| TGCCATAGAGCAGATTCACC+TGG | 0.628858 | 5:-17561671 | None:intergenic |
| AGCTGTAAAGCTACCTCCCG+GGG | 0.630309 | 5:+17561449 | MsG0580025369.01.T01:CDS |
| ATTAGGGAGTGGAAATCTGA+GGG | 0.636791 | 5:+17561425 | MsG0580025369.01.T01:CDS |
| ATTGATGCGACATTAGGGAG+TGG | 0.654161 | 5:+17561414 | MsG0580025369.01.T01:CDS |
| TGTAAAGCTACCTCCCGGGG+AGG | 0.655742 | 5:+17561452 | MsG0580025369.01.T01:CDS |
| CTTGAAGCATGTGTTCAGAT+GGG | 0.667441 | 5:-17563061 | None:intergenic |
| GGGAGTACAGAACTCTGTGA+GGG | 0.667733 | 5:-17561694 | None:intergenic |
| CGGGAGTACAGAACTCTGTG+AGG | 0.670311 | 5:-17561695 | None:intergenic |
| TCATTCAAATCCTCCCCGGG+AGG | 0.705832 | 5:-17561462 | None:intergenic |
| GATATATATGAGCATATACA+CGG | 0.719167 | 5:-17562999 | None:intergenic |
| GCTATCACACAATTGTGTAG+CGG | 0.730635 | 5:+17559479 | MsG0580025369.01.T01:CDS |
| AGTCTCAAATACATGCAATG+GGG | 0.736751 | 5:+17563449 | MsG0580025369.01.T01:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATAAATAAAATAAAAAAT+AGG | - | Chr5:17560998-17561017 | None:intergenic | 0.0% |
| !! | AATATATTAAATGTTGAATT+GGG | + | Chr5:17563267-17563286 | MsG0580025369.01.T01:exon | 10.0% |
| !! | ATTAAATTAAAGTAAAACAT+TGG | - | Chr5:17563486-17563505 | None:intergenic | 10.0% |
| !! | ATTCAACATTTAATATATTA+TGG | - | Chr5:17563266-17563285 | None:intergenic | 10.0% |
| !! | CACATATATAAATATAATTT+AGG | + | Chr5:17561209-17561228 | MsG0580025369.01.T01:intron | 10.0% |
| !! | TAATATATTAAATGTTGAAT+TGG | + | Chr5:17563266-17563285 | MsG0580025369.01.T01:exon | 10.0% |
| !! | TCAAAAAAAAAAAAAAATAC+CGG | - | Chr5:17560436-17560455 | None:intergenic | 10.0% |
| !! | TTAAATTAAAGTAAAACATT+GGG | - | Chr5:17563485-17563504 | None:intergenic | 10.0% |
| !!! | TTTACTTTAATTTAATGTAT+TGG | + | Chr5:17563490-17563509 | MsG0580025369.01.T01:three_prime_UTR | 10.0% |
| !!! | TTTGTTTCATTTATTTATTT+TGG | - | Chr5:17560584-17560603 | None:intergenic | 10.0% |
| !! | AAATTATCCTTATTAACTAT+TGG | + | Chr5:17559878-17559897 | MsG0580025369.01.T01:intron | 15.0% |
| !! | AATAGTTAATAAGGATAATT+TGG | - | Chr5:17559879-17559898 | None:intergenic | 15.0% |
| !! | GAATTGTATGAATATATAAT+TGG | - | Chr5:17561591-17561610 | None:intergenic | 15.0% |
| !! | TAAGATTATCACTTTATTAT+TGG | - | Chr5:17563601-17563620 | None:intergenic | 15.0% |
| !! | TATAATAAAACATGCTTTAT+TGG | + | Chr5:17560685-17560704 | MsG0580025369.01.T01:intron | 15.0% |
| !! | TATTTATAAATTTCGATCTT+CGG | + | Chr5:17561009-17561028 | MsG0580025369.01.T01:intron | 15.0% |
| !! | TCATAAAAATAAGTGTAATA+CGG | + | Chr5:17561907-17561926 | MsG0580025369.01.T01:intron | 15.0% |
| !!! | ATTTAAAACTACAATGATTT+TGG | - | Chr5:17562263-17562282 | None:intergenic | 15.0% |
| !!! | CATCAATTTTCTAAAAATTA+AGG | - | Chr5:17561266-17561285 | None:intergenic | 15.0% |
| !!! | CATTTTGAAACAATTTTTTT+TGG | + | Chr5:17560005-17560024 | MsG0580025369.01.T01:intron | 15.0% |
| !!! | TAGTTTTAAAAGTTATACTT+TGG | + | Chr5:17559902-17559921 | MsG0580025369.01.T01:intron | 15.0% |
| !!! | TTATTTTTATGATCATTTAG+TGG | - | Chr5:17561899-17561918 | None:intergenic | 15.0% |
| !!! | TTTTCTAAAAATTAAGGTTA+TGG | - | Chr5:17561260-17561279 | None:intergenic | 15.0% |
| !! | AAAATATCCCTTAGAAATAA+AGG | - | Chr5:17560313-17560332 | None:intergenic | 20.0% |
| !! | AAACTAACCAATAGTTAATA+AGG | - | Chr5:17559888-17559907 | None:intergenic | 20.0% |
| !! | AAAGTATGTAGAATATCTTA+TGG | + | Chr5:17562776-17562795 | MsG0580025369.01.T01:CDS | 20.0% |
| !! | AAATATCCCTTAGAAATAAA+GGG | - | Chr5:17560312-17560331 | None:intergenic | 20.0% |
| !! | AAATGCAAAATGTTTGAATA+TGG | + | Chr5:17560952-17560971 | MsG0580025369.01.T01:intron | 20.0% |
| !! | AATTCAATGAATTCAACTAA+TGG | + | Chr5:17560507-17560526 | MsG0580025369.01.T01:intron | 20.0% |
| !! | AGAAAAAGTTATTATTGCAT+TGG | + | Chr5:17559965-17559984 | MsG0580025369.01.T01:intron | 20.0% |
| !! | ATAAGATATTCTACATACTT+TGG | - | Chr5:17562777-17562796 | None:intergenic | 20.0% |
| !! | CTACAAATCTATACAAAAAT+AGG | - | Chr5:17562664-17562683 | None:intergenic | 20.0% |
| !! | GAATAGAAAATTACTTAGAT+TGG | + | Chr5:17561844-17561863 | MsG0580025369.01.T01:intron | 20.0% |
| !! | TATAAATAAATGCATGAAAG+TGG | - | Chr5:17559767-17559786 | None:intergenic | 20.0% |
| !!! | AATTTGAAATACTTTCTGAA+AGG | - | Chr5:17562374-17562393 | None:intergenic | 20.0% |
| !!! | ACTGTTTATTTTAAAATCAG+TGG | - | Chr5:17562620-17562639 | None:intergenic | 20.0% |
| !!! | CACATTTTCTTAAAGATAAT+TGG | + | Chr5:17562860-17562879 | MsG0580025369.01.T01:intron | 20.0% |
| !!! | CTGTTTATTTTAAAATCAGT+GGG | - | Chr5:17562619-17562638 | None:intergenic | 20.0% |
| !!! | TATTCTGTTCTGAATTTTTA+TGG | + | Chr5:17562500-17562519 | MsG0580025369.01.T01:intron | 20.0% |
| !!! | TTCGTAATTTGTTTATAACT+TGG | + | Chr5:17562031-17562050 | MsG0580025369.01.T01:intron | 20.0% |
| !!! | TTGATAACTTTAATTGATCT+AGG | - | Chr5:17562059-17562078 | None:intergenic | 20.0% |
| !!! | TTGATGTTTTAGTATGAATT+TGG | + | Chr5:17563548-17563567 | MsG0580025369.01.T01:three_prime_UTR | 20.0% |
| !!! | TTTATTTCTAAGGGATATTT+TGG | + | Chr5:17560312-17560331 | MsG0580025369.01.T01:intron | 20.0% |
| ! | AAAACATCAAACATGAAGTA+TGG | - | Chr5:17563538-17563557 | None:intergenic | 25.0% |
| ! | AACAGTGTTAATTAATACAC+AGG | - | Chr5:17562144-17562163 | None:intergenic | 25.0% |
| ! | ACAGTGTTAATTAATACACA+GGG | - | Chr5:17562143-17562162 | None:intergenic | 25.0% |
| ! | ATAACATTTGATGCTTATCT+AGG | + | Chr5:17559732-17559751 | MsG0580025369.01.T01:intron | 25.0% |
| ! | ATCATTATCATCGTCATTAA+AGG | - | Chr5:17562446-17562465 | None:intergenic | 25.0% |
| ! | CAATATAAAAGACTCAATAC+AGG | + | Chr5:17560719-17560738 | MsG0580025369.01.T01:intron | 25.0% |
| ! | CGCAACATTTAAGAAATTTA+AGG | - | Chr5:17561786-17561805 | None:intergenic | 25.0% |
| ! | GATATATATGAGCATATACA+CGG | - | Chr5:17563002-17563021 | None:intergenic | 25.0% |
| ! | TAAAAATAAGTGTAATACGG+TGG | + | Chr5:17561910-17561929 | MsG0580025369.01.T01:intron | 25.0% |
| ! | TACAAAATGTTGTCAAATAG+CGG | + | Chr5:17559455-17559474 | MsG0580025369.01.T01:CDS | 25.0% |
| ! | TACATACATATTCGATCATT+AGG | - | Chr5:17560782-17560801 | None:intergenic | 25.0% |
| ! | TTGTGAAATATCTTTATCCT+AGG | + | Chr5:17563307-17563326 | MsG0580025369.01.T01:three_prime_UTR | 25.0% |
| !! | AAGATTTTCCTTCATTTAGA+GGG | + | Chr5:17560386-17560405 | MsG0580025369.01.T01:intron | 25.0% |
| !! | CAGATGAATTTAGAATGAAT+CGG | - | Chr5:17562480-17562499 | None:intergenic | 25.0% |
| !! | TAAGATTTTCCTTCATTTAG+AGG | + | Chr5:17560385-17560404 | MsG0580025369.01.T01:intron | 25.0% |
| !!! | AAGTTACCATTTTTCGATAA+TGG | + | Chr5:17562204-17562223 | MsG0580025369.01.T01:intron | 25.0% |
| !!! | ACTGTTGTTATTATTTTTGC+AGG | + | Chr5:17563186-17563205 | MsG0580025369.01.T01:intron | 25.0% |
| !!! | ACTTAGGAGTGTTTATTATT+TGG | + | Chr5:17562320-17562339 | MsG0580025369.01.T01:intron | 25.0% |
| !!! | ATGATCAGTATTGGTAATTT+TGG | + | Chr5:17560091-17560110 | MsG0580025369.01.T01:intron | 25.0% |
| !!! | GTTCTGAATTTTTATGGATT+TGG | + | Chr5:17562506-17562525 | MsG0580025369.01.T01:intron | 25.0% |
| !!! | TATTATTTTTGCAGGAGTTT+GGG | + | Chr5:17563194-17563213 | MsG0580025369.01.T01:intron | 25.0% |
| !!! | TGTTTTAGTATGAATTTGGA+AGG | + | Chr5:17563552-17563571 | MsG0580025369.01.T01:three_prime_UTR | 25.0% |
| !!! | TTATTATTTTTGCAGGAGTT+TGG | + | Chr5:17563193-17563212 | MsG0580025369.01.T01:intron | 25.0% |
| AAAAATCAACAGCTGAAATG+TGG | - | Chr5:17561647-17561666 | None:intergenic | 30.0% | |
| AAAATCAACAGCTGAAATGT+GGG | - | Chr5:17561646-17561665 | None:intergenic | 30.0% | |
| AAAGTCTCAAATACATGCAA+TGG | + | Chr5:17563447-17563466 | MsG0580025369.01.T01:three_prime_UTR | 30.0% | |
| AAGGAATGCTGTTCATTATA+AGG | - | Chr5:17562427-17562446 | None:intergenic | 30.0% | |
| AAGTAAAACATTGGGATCTA+TGG | - | Chr5:17563477-17563496 | None:intergenic | 30.0% | |
| AAGTCTCAAATACATGCAAT+GGG | + | Chr5:17563448-17563467 | MsG0580025369.01.T01:three_prime_UTR | 30.0% | |
| AGTGAAACTTTCCATTATAC+TGG | + | Chr5:17560118-17560137 | MsG0580025369.01.T01:intron | 30.0% | |
| ATCAGTTAACTATGCATACT+TGG | - | Chr5:17561748-17561767 | None:intergenic | 30.0% | |
| ATCTGTTGTGTTGAATAGTT+TGG | + | Chr5:17563383-17563402 | MsG0580025369.01.T01:three_prime_UTR | 30.0% | |
| ATGTAGAATATCTTATGGAC+TGG | + | Chr5:17562781-17562800 | MsG0580025369.01.T01:CDS | 30.0% | |
| ATGTGACAGATAATCAAGAT+AGG | - | Chr5:17562090-17562109 | None:intergenic | 30.0% | |
| CCAGTATAAAAATGTCTAGA+TGG | - | Chr5:17559613-17559632 | None:intergenic | 30.0% | |
| GCAAATTAAGAAACCTATTG+AGG | + | Chr5:17562743-17562762 | MsG0580025369.01.T01:CDS | 30.0% | |
| GTCTATTACATGAAAACTCT+AGG | + | Chr5:17562694-17562713 | MsG0580025369.01.T01:intron | 30.0% | |
| TCAGTTAACTATGCATACTT+GGG | - | Chr5:17561747-17561766 | None:intergenic | 30.0% | |
| TCCAGCTTGTAAATACTTTA+AGG | - | Chr5:17560655-17560674 | None:intergenic | 30.0% | |
| TCGTGAAGACAATATTTAAG+CGG | + | Chr5:17562971-17562990 | MsG0580025369.01.T01:CDS | 30.0% | |
| TCTATCAGTGTTATCAATTG+TGG | - | Chr5:17559534-17559553 | None:intergenic | 30.0% | |
| TCTGTTGTGTTGAATAGTTT+GGG | + | Chr5:17563384-17563403 | MsG0580025369.01.T01:three_prime_UTR | 30.0% | |
| ! | ACAGGGCATTAAATTAAAAC+AGG | - | Chr5:17562126-17562145 | None:intergenic | 30.0% |
| ! | CATCATCAACTGTCAAATTT+TGG | + | Chr5:17560926-17560945 | MsG0580025369.01.T01:intron | 30.0% |
| ! | CCATCTAGACATTTTTATAC+TGG | + | Chr5:17559610-17559629 | MsG0580025369.01.T01:intron | 30.0% |
| ! | CCTTAAATACGGTTTTCAAA+AGG | + | Chr5:17560545-17560564 | MsG0580025369.01.T01:intron | 30.0% |
| ! | GATTAATTTTTATGCCCTGA+CGG | - | Chr5:17563160-17563179 | None:intergenic | 30.0% |
| ! | GATTTGGCTTCTTTAAAGAA+GGG | + | Chr5:17562522-17562541 | MsG0580025369.01.T01:intron | 30.0% |
| ! | TAATCTTGTTCTCTGAAAGT+TGG | - | Chr5:17561314-17561333 | None:intergenic | 30.0% |
| ! | TCCTTAAAGTATTTACAAGC+TGG | + | Chr5:17560651-17560670 | MsG0580025369.01.T01:intron | 30.0% |
| ! | TCGTCATAGAAGAAGATTTT+TGG | + | Chr5:17561989-17562008 | MsG0580025369.01.T01:intron | 30.0% |
| ! | TTAAAGTATTTACAAGCTGG+AGG | + | Chr5:17560654-17560673 | MsG0580025369.01.T01:intron | 30.0% |
| !! | AAACGACACTCATTTTGAAA+CGG | - | Chr5:17559796-17559815 | None:intergenic | 30.0% |
| !! | ATTAACACTGTTTTTCGTGA+AGG | + | Chr5:17562152-17562171 | MsG0580025369.01.T01:intron | 30.0% |
| !! | CCTTTTGAAAACCGTATTTA+AGG | - | Chr5:17560548-17560567 | None:intergenic | 30.0% |
| !! | TGACAAAAGTACCAGTATAA+TGG | - | Chr5:17560132-17560151 | None:intergenic | 30.0% |
| !! | TTGGTTCCCTTTATTTCTAA+GGG | + | Chr5:17560303-17560322 | MsG0580025369.01.T01:intron | 30.0% |
| !!! | GCTGTTACATTTTAATTGCA+GGG | + | Chr5:17561372-17561391 | MsG0580025369.01.T01:intron | 30.0% |
| !!! | TGATTTTAGTTATGCTTCCT+AGG | - | Chr5:17563327-17563346 | None:intergenic | 30.0% |
| !!! | TGCTGTTACATTTTAATTGC+AGG | + | Chr5:17561371-17561390 | MsG0580025369.01.T01:intron | 30.0% |
| AAAAGCAAGACCGGTATTAA+TGG | + | Chr5:17560463-17560482 | MsG0580025369.01.T01:intron | 35.0% | |
| AAACACATTGATGCGACATT+AGG | + | Chr5:17561408-17561427 | MsG0580025369.01.T01:CDS | 35.0% | |
| AAAGCAAGACCGGTATTAAT+GGG | + | Chr5:17560464-17560483 | MsG0580025369.01.T01:intron | 35.0% | |
| AAATTTCGATCTTCGGATGA+GGG | + | Chr5:17561016-17561035 | MsG0580025369.01.T01:intron | 35.0% | |
| AACACATTGATGCGACATTA+GGG | + | Chr5:17561409-17561428 | MsG0580025369.01.T01:CDS | 35.0% | |
| AAGTAGATTCCGTATCTCTA+TGG | + | Chr5:17560889-17560908 | MsG0580025369.01.T01:intron | 35.0% | |
| AAGTATTTACCAAGCTTCTG+AGG | - | Chr5:17562840-17562859 | None:intergenic | 35.0% | |
| ACCACTTTGCCATAAATTGT+TGG | + | Chr5:17561955-17561974 | MsG0580025369.01.T01:intron | 35.0% | |
| ACTCTAGGTATGAGTATAGA+TGG | + | Chr5:17562709-17562728 | MsG0580025369.01.T01:intron | 35.0% | |
| AGCACTCCATTATCGAAAAA+TGG | - | Chr5:17562213-17562232 | None:intergenic | 35.0% | |
| AGCATAAAAATTACACCGTC+AGG | + | Chr5:17563142-17563161 | MsG0580025369.01.T01:intron | 35.0% | |
| AGTATTTACCAAGCTTCTGA+GGG | - | Chr5:17562839-17562858 | None:intergenic | 35.0% | |
| AGTCTCAAATACATGCAATG+GGG | + | Chr5:17563449-17563468 | MsG0580025369.01.T01:three_prime_UTR | 35.0% | |
| ATCATTAGGTTCTCCATTTG+CGG | - | Chr5:17560768-17560787 | None:intergenic | 35.0% | |
| CAGTAGAGAATGATCAGTAT+TGG | + | Chr5:17560082-17560101 | MsG0580025369.01.T01:intron | 35.0% | |
| CTAGAATCTAGACAGTACTT+AGG | + | Chr5:17562304-17562323 | MsG0580025369.01.T01:intron | 35.0% | |
| CTCTAGGTATGAGTATAGAT+GGG | + | Chr5:17562710-17562729 | MsG0580025369.01.T01:intron | 35.0% | |
| GAAATGCTATAGAAGAAGCA+TGG | - | Chr5:17559586-17559605 | None:intergenic | 35.0% | |
| GCATAAAAATTACACCGTCA+GGG | + | Chr5:17563143-17563162 | MsG0580025369.01.T01:intron | 35.0% | |
| GTAACTCATAATCGTTGCTA+AGG | - | Chr5:17561176-17561195 | None:intergenic | 35.0% | |
| GTCGAAATACAAAAGTAGTG+TGG | - | Chr5:17560211-17560230 | None:intergenic | 35.0% | |
| GTTTCTATAAGCTCTTGAAG+TGG | - | Chr5:17563244-17563263 | None:intergenic | 35.0% | |
| TAAATTTCGATCTTCGGATG+AGG | + | Chr5:17561015-17561034 | MsG0580025369.01.T01:intron | 35.0% | |
| TACAAGGAGCCAACAATTTA+TGG | - | Chr5:17561967-17561986 | None:intergenic | 35.0% | |
| TACGCATAACCATAGAGATA+CGG | - | Chr5:17560901-17560920 | None:intergenic | 35.0% | |
| TAGAGATACGGAATCTACTT+TGG | - | Chr5:17560889-17560908 | None:intergenic | 35.0% | |
| TGTTGAATAGTTTGGGAACA+GGG | + | Chr5:17563391-17563410 | MsG0580025369.01.T01:three_prime_UTR | 35.0% | |
| TTAAATGTTGAATTGGGACC+AGG | + | Chr5:17563273-17563292 | MsG0580025369.01.T01:exon | 35.0% | |
| TTCTTCTATGACGAGATACA+AGG | - | Chr5:17561983-17562002 | None:intergenic | 35.0% | |
| ! | AAAGCGTCTTGCCTTAAATA+CGG | + | Chr5:17560534-17560553 | MsG0580025369.01.T01:intron | 35.0% |
| ! | AAGTGAAGAGCATATAGTAG+TGG | - | Chr5:17559706-17559725 | None:intergenic | 35.0% |
| ! | ACAGTGTAAGAGTATATGAG+TGG | + | Chr5:17561105-17561124 | MsG0580025369.01.T01:intron | 35.0% |
| ! | ACTGTCTAGATTCTAGAAAC+TGG | - | Chr5:17562300-17562319 | None:intergenic | 35.0% |
| ! | AGTGTAAGAGTATATGAGTG+GGG | + | Chr5:17561107-17561126 | MsG0580025369.01.T01:intron | 35.0% |
| ! | CAGTGTAAGAGTATATGAGT+GGG | + | Chr5:17561106-17561125 | MsG0580025369.01.T01:intron | 35.0% |
| ! | CATGAAGTATGGTTTTCAGT+TGG | - | Chr5:17563527-17563546 | None:intergenic | 35.0% |
| ! | CATTCTTGTTGTATGACCTA+TGG | + | Chr5:17562908-17562927 | MsG0580025369.01.T01:intron | 35.0% |
| ! | GGATTTGGCTTCTTTAAAGA+AGG | + | Chr5:17562521-17562540 | MsG0580025369.01.T01:intron | 35.0% |
| ! | GTAGTGTGCAGAGTATTAAT+TGG | + | Chr5:17559927-17559946 | MsG0580025369.01.T01:intron | 35.0% |
| ! | TAAAGAAGGGATGCATTTTG+AGG | + | Chr5:17562535-17562554 | MsG0580025369.01.T01:intron | 35.0% |
| ! | TGTGCAGAGTATTAATTGGA+GGG | + | Chr5:17559931-17559950 | MsG0580025369.01.T01:intron | 35.0% |
| !! | GTTGGTTCCCTTTATTTCTA+AGG | + | Chr5:17560302-17560321 | MsG0580025369.01.T01:intron | 35.0% |
| !! | TATTTAAGGCAAGACGCTTT+TGG | - | Chr5:17560534-17560553 | None:intergenic | 35.0% |
| !! | TGAATTTGGAAGGCTGTTTT+TGG | + | Chr5:17563562-17563581 | MsG0580025369.01.T01:three_prime_UTR | 35.0% |
| !!! | AGCTGTTGATTTTTTCAACC+AGG | + | Chr5:17561653-17561672 | MsG0580025369.01.T01:intron | 35.0% |
| !!! | GACACTCATTTTGAAACAGA+GGG | + | Chr5:17560035-17560054 | MsG0580025369.01.T01:intron | 35.0% |
| AAGCAAGACCGGTATTAATG+GGG | + | Chr5:17560465-17560484 | MsG0580025369.01.T01:intron | 40.0% | |
| AATGTTTGAATATGGCCAGC+TGG | + | Chr5:17560960-17560979 | MsG0580025369.01.T01:intron | 40.0% | |
| AATTGTGAGCCTCAAAGAAG+AGG | + | Chr5:17563038-17563057 | MsG0580025369.01.T01:CDS | 40.0% | |
| ACCAATCAGACGAAAAGACT+AGG | - | Chr5:17559560-17559579 | None:intergenic | 40.0% | |
| AGACATTGTGCGACAATTCT+CGG | - | Chr5:17561718-17561737 | None:intergenic | 40.0% | |
| AGGAAGAAAAAAAAGCCAGC+TGG | - | Chr5:17560978-17560997 | None:intergenic | 40.0% | |
| ATTAGGGAGTGGAAATCTGA+GGG | + | Chr5:17561425-17561444 | MsG0580025369.01.T01:CDS | 40.0% | |
| CTGTTGCAGAATCATTTGTC+AGG | - | Chr5:17560233-17560252 | None:intergenic | 40.0% | |
| CTTCACGACATCCTTAAAGT+TGG | - | Chr5:17562959-17562978 | None:intergenic | 40.0% | |
| CTTGAAGCATGTGTTCAGAT+GGG | - | Chr5:17563064-17563083 | None:intergenic | 40.0% | |
| GAAGAAGCTAAAAGCAAGAC+CGG | + | Chr5:17560454-17560473 | MsG0580025369.01.T01:intron | 40.0% | |
| GCCAACAATTTATGGCAAAG+TGG | - | Chr5:17561959-17561978 | None:intergenic | 40.0% | |
| GCTATCACACAATTGTGTAG+CGG | + | Chr5:17559479-17559498 | MsG0580025369.01.T01:CDS | 40.0% | |
| GCTGATTGACAAAAAGGAAC+TGG | + | Chr5:17563216-17563235 | MsG0580025369.01.T01:CDS | 40.0% | |
| GTGTTGAATAGTTTGGGAAC+AGG | + | Chr5:17563390-17563409 | MsG0580025369.01.T01:three_prime_UTR | 40.0% | |
| GTTTGGGCTGATTGACAAAA+AGG | + | Chr5:17563210-17563229 | MsG0580025369.01.T01:CDS | 40.0% | |
| TATGACCTATGGAATCATGC+AGG | + | Chr5:17562919-17562938 | MsG0580025369.01.T01:intron | 40.0% | |
| TATGAGTATAGATGGGCAGA+TGG | + | Chr5:17562717-17562736 | MsG0580025369.01.T01:CDS | 40.0% | |
| TCATTAGGTTCTCCATTTGC+GGG | - | Chr5:17560767-17560786 | None:intergenic | 40.0% | |
| TCCATTTCCTGCCAACTTTA+AGG | + | Chr5:17562945-17562964 | MsG0580025369.01.T01:CDS | 40.0% | |
| TCCTTAAAGTTGGCAGGAAA+TGG | - | Chr5:17562949-17562968 | None:intergenic | 40.0% | |
| TCCTTTCCTTGCCTTCTTTA+CGG | + | Chr5:17559639-17559658 | MsG0580025369.01.T01:intron | 40.0% | |
| TTCACAATTCACAGTAAGCC+TGG | - | Chr5:17563294-17563313 | None:intergenic | 40.0% | |
| TTGTGGATCACAGAAGATAG+TGG | - | Chr5:17559517-17559536 | None:intergenic | 40.0% | |
| ! | CTTGACTTGAAAAGCAAGAC+CGG | + | Chr5:17560414-17560433 | MsG0580025369.01.T01:intron | 40.0% |
| ! | GATTCTAGAAACTGGACAAC+TGG | - | Chr5:17562292-17562311 | None:intergenic | 40.0% |
| ! | GTGTGCAGAGTATTAATTGG+AGG | + | Chr5:17559930-17559949 | MsG0580025369.01.T01:intron | 40.0% |
| ! | TAAGAGTATATGAGTGGGGA+GGG | + | Chr5:17561111-17561130 | MsG0580025369.01.T01:intron | 40.0% |
| ! | TTTGGAGCAGAAACCTCAAT+AGG | - | Chr5:17562759-17562778 | None:intergenic | 40.0% |
| !! | GTGTAATACGGTGGATTGTT+TGG | + | Chr5:17561919-17561938 | MsG0580025369.01.T01:intron | 40.0% |
| !! | TCCTAGTCTTTTCGTCTGAT+TGG | + | Chr5:17559556-17559575 | MsG0580025369.01.T01:intron | 40.0% |
| !!! | CAGAAGGAGTGCTTTTTTTG+GGG | - | Chr5:17560274-17560293 | None:intergenic | 40.0% |
| !!! | CCAGAAGGAGTGCTTTTTTT+GGG | - | Chr5:17560275-17560294 | None:intergenic | 40.0% |
| !!! | CGACACTCATTTTGAAACAG+AGG | + | Chr5:17560034-17560053 | MsG0580025369.01.T01:intron | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | - | Chr5:17559792-17559811 | None:intergenic | 40.0% |
| !!! | TCCAGAAGGAGTGCTTTTTT+TGG | - | Chr5:17560276-17560295 | None:intergenic | 40.0% |
| AACCAGGTGAATCTGCTCTA+TGG | + | Chr5:17561669-17561688 | MsG0580025369.01.T01:CDS | 45.0% | |
| AAGGTCGTCCCTCTAAATGA+AGG | - | Chr5:17560397-17560416 | None:intergenic | 45.0% | |
| AATTGTCGCACAATGTCTGC+AGG | + | Chr5:17561720-17561739 | MsG0580025369.01.T01:CDS | 45.0% | |
| ACGACATCCTTAAAGTTGGC+AGG | - | Chr5:17562955-17562974 | None:intergenic | 45.0% | |
| ATGCGAGCTTTCTGTGATGA+AGG | - | Chr5:17563427-17563446 | None:intergenic | 45.0% | |
| ATTAATGGGGAGAGGGAATG+CGG | + | Chr5:17560478-17560497 | MsG0580025369.01.T01:intron | 45.0% | |
| ATTGATGCGACATTAGGGAG+TGG | + | Chr5:17561414-17561433 | MsG0580025369.01.T01:CDS | 45.0% | |
| CATTAGGGAGTGGAAATCTG+AGG | + | Chr5:17561424-17561443 | MsG0580025369.01.T01:CDS | 45.0% | |
| GACATTGTGCGACAATTCTC+GGG | - | Chr5:17561717-17561736 | None:intergenic | 45.0% | |
| GAGAACCTGCATGATTCCAT+AGG | - | Chr5:17562927-17562946 | None:intergenic | 45.0% | |
| GCTTGAAGCATGTGTTCAGA+TGG | - | Chr5:17563065-17563084 | None:intergenic | 45.0% | |
| GTGATTTCATGCAAGGAGTG+TGG | + | Chr5:17561058-17561077 | MsG0580025369.01.T01:intron | 45.0% | |
| TCCATATTCCCTCAGAAGCT+TGG | + | Chr5:17562828-17562847 | MsG0580025369.01.T01:CDS | 45.0% | |
| TCCGTAAAGAAGGCAAGGAA+AGG | - | Chr5:17559643-17559662 | None:intergenic | 45.0% | |
| TGCGAGCTTTCTGTGATGAA+GGG | - | Chr5:17563426-17563445 | None:intergenic | 45.0% | |
| TTCCCTCTCCCCATTAATAC+CGG | - | Chr5:17560476-17560495 | None:intergenic | 45.0% | |
| ! | AAGAGTATATGAGTGGGGAG+GGG | + | Chr5:17561112-17561131 | MsG0580025369.01.T01:intron | 45.0% |
| ! | ACCAAGCTTCTGAGGGAATA+TGG | - | Chr5:17562832-17562851 | None:intergenic | 45.0% |
| ! | AGGCTACTTTGAGTCACTGA+AGG | + | Chr5:17560739-17560758 | MsG0580025369.01.T01:intron | 45.0% |
| ! | CAAGGAGTGTGGTTGTAACT+TGG | + | Chr5:17561069-17561088 | MsG0580025369.01.T01:intron | 45.0% |
| ! | GTAAGAGTATATGAGTGGGG+AGG | + | Chr5:17561110-17561129 | MsG0580025369.01.T01:intron | 45.0% |
| !! | CCCAAAAAAAGCACTCCTTC+TGG | + | Chr5:17560272-17560291 | MsG0580025369.01.T01:intron | 45.0% |
| !!! | AAGGAGTGCTTTTTTTGGGG+CGG | - | Chr5:17560271-17560290 | None:intergenic | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | - | Chr5:17559793-17559812 | None:intergenic | 45.0% |
| !!! | CGGTCTTGCTTTTCAAGTCA+AGG | - | Chr5:17560416-17560435 | None:intergenic | 45.0% |
| !!! | TTTTTTTTTTTTTTTGAAAA+TGG | - | Chr5:17562400-17562419 | None:intergenic | 5.0% |
| AACAATCCCTTCACCACGAC+TGG | - | Chr5:17559669-17559688 | None:intergenic | 50.0% | |
| AAGCTGTAAAGCTACCTCCC+GGG | + | Chr5:17561448-17561467 | MsG0580025369.01.T01:CDS | 50.0% | |
| AGACCGGTATTAATGGGGAG+AGG | + | Chr5:17560470-17560489 | MsG0580025369.01.T01:intron | 50.0% | |
| ATCTTCGGATGAGGGATGGT+GGG | + | Chr5:17561024-17561043 | MsG0580025369.01.T01:intron | 50.0% | |
| CACTCATTCAAATCCTCCCC+GGG | - | Chr5:17561468-17561487 | None:intergenic | 50.0% | |
| CCACTCATTCAAATCCTCCC+CGG | - | Chr5:17561469-17561488 | None:intergenic | 50.0% | |
| CGACTGGACATCCGTAAAGA+AGG | - | Chr5:17559653-17559672 | None:intergenic | 50.0% | |
| GAACCAACCTTGCTTCCAGA+AGG | - | Chr5:17560290-17560309 | None:intergenic | 50.0% | |
| GAAGCTGTAAAGCTACCTCC+CGG | + | Chr5:17561447-17561466 | MsG0580025369.01.T01:CDS | 50.0% | |
| GACCGGTATTAATGGGGAGA+GGG | + | Chr5:17560471-17560490 | MsG0580025369.01.T01:intron | 50.0% | |
| GGACATCCGTAAAGAAGGCA+AGG | - | Chr5:17559648-17559667 | None:intergenic | 50.0% | |
| GGAGTGTGGTTGTAACTTGG+AGG | + | Chr5:17561072-17561091 | MsG0580025369.01.T01:intron | 50.0% | |
| GGTGAGGGTGATTTCATGCA+AGG | + | Chr5:17561051-17561070 | MsG0580025369.01.T01:intron | 50.0% | |
| GTGTGGTTGTAACTTGGAGG+AGG | + | Chr5:17561075-17561094 | MsG0580025369.01.T01:intron | 50.0% | |
| TCAACAGCTGAAATGTGGGC+AGG | - | Chr5:17561642-17561661 | None:intergenic | 50.0% | |
| TCAGATGGGCCTCTTCTTTG+AGG | - | Chr5:17563050-17563069 | None:intergenic | 50.0% | |
| TCTTTACGGATGTCCAGTCG+TGG | + | Chr5:17559653-17559672 | MsG0580025369.01.T01:intron | 50.0% | |
| TGCCATAGAGCAGATTCACC+TGG | - | Chr5:17561674-17561693 | None:intergenic | 50.0% | |
| TTCGATCTTCGGATGAGGGA+TGG | + | Chr5:17561020-17561039 | MsG0580025369.01.T01:intron | 50.0% | |
| ! | AAGCACTCCTTCTGGAAGCA+AGG | + | Chr5:17560280-17560299 | MsG0580025369.01.T01:intron | 50.0% |
| ! | ACTCCTTCTGGAAGCAAGGT+TGG | + | Chr5:17560284-17560303 | MsG0580025369.01.T01:intron | 50.0% |
| ! | GGGAGTACAGAACTCTGTGA+GGG | - | Chr5:17561697-17561716 | None:intergenic | 50.0% |
| !!! | TTTTGGGGCGGAATGTTCTC+TGG | - | Chr5:17560259-17560278 | None:intergenic | 50.0% |
| AGCTGTAAAGCTACCTCCCG+GGG | + | Chr5:17561449-17561468 | MsG0580025369.01.T01:CDS | 55.0% | |
| CCGGGGAGGATTTGAATGAG+TGG | + | Chr5:17561466-17561485 | MsG0580025369.01.T01:CDS | 55.0% | |
| GATCTTCGGATGAGGGATGG+TGG | + | Chr5:17561023-17561042 | MsG0580025369.01.T01:intron | 55.0% | |
| GGATGTCCAGTCGTGGTGAA+GGG | + | Chr5:17559660-17559679 | MsG0580025369.01.T01:intron | 55.0% | |
| TCATTCAAATCCTCCCCGGG+AGG | - | Chr5:17561465-17561484 | None:intergenic | 55.0% | |
| TCTTCGGATGAGGGATGGTG+GGG | + | Chr5:17561025-17561044 | MsG0580025369.01.T01:intron | 55.0% | |
| ! | CGGGAGTACAGAACTCTGTG+AGG | - | Chr5:17561698-17561717 | None:intergenic | 55.0% |
| !! | TCACTGAAGGTGCCCGCAAA+TGG | + | Chr5:17560752-17560771 | MsG0580025369.01.T01:intron | 55.0% |
| CGGATGTCCAGTCGTGGTGA+AGG | + | Chr5:17559659-17559678 | MsG0580025369.01.T01:intron | 60.0% | |
| TGTAAAGCTACCTCCCGGGG+AGG | + | Chr5:17561452-17561471 | MsG0580025369.01.T01:CDS | 60.0% | |
| !! | AGGGATGGTGGGGCATGGTG+AGG | + | Chr5:17561035-17561054 | MsG0580025369.01.T01:intron | 65.0% |
| !! | GGATGAGGGATGGTGGGGCA+TGG | + | Chr5:17561030-17561049 | MsG0580025369.01.T01:intron | 65.0% |
| !! | GGGATGGTGGGGCATGGTGA+GGG | + | Chr5:17561036-17561055 | MsG0580025369.01.T01:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr5 | gene | 17559417 | 17563632 | 17559417 | ID=MsG0580025369.01;Name=MsG0580025369.01 |
| Chr5 | mRNA | 17559417 | 17563632 | 17559417 | ID=MsG0580025369.01.T01;Parent=MsG0580025369.01;Name=MsG0580025369.01.T01;_AED=0.42;_eAED=0.47;_QI=0|0.8|0.83|1|1|1|6|356|217 |
| Chr5 | exon | 17559417 | 17559500 | 17559417 | ID=MsG0580025369.01.T01:exon:28461;Parent=MsG0580025369.01.T01 |
| Chr5 | exon | 17561393 | 17561501 | 17561393 | ID=MsG0580025369.01.T01:exon:28462;Parent=MsG0580025369.01.T01 |
| Chr5 | exon | 17561655 | 17561748 | 17561655 | ID=MsG0580025369.01.T01:exon:28463;Parent=MsG0580025369.01.T01 |
| Chr5 | exon | 17562716 | 17562849 | 17562716 | ID=MsG0580025369.01.T01:exon:28464;Parent=MsG0580025369.01.T01 |
| Chr5 | exon | 17562941 | 17563104 | 17562941 | ID=MsG0580025369.01.T01:exon:28465;Parent=MsG0580025369.01.T01 |
| Chr5 | exon | 17563208 | 17563632 | 17563208 | ID=MsG0580025369.01.T01:exon:28466;Parent=MsG0580025369.01.T01 |
| Chr5 | CDS | 17559417 | 17559500 | 17559417 | ID=MsG0580025369.01.T01:cds;Parent=MsG0580025369.01.T01 |
| Chr5 | CDS | 17561393 | 17561501 | 17561393 | ID=MsG0580025369.01.T01:cds;Parent=MsG0580025369.01.T01 |
| Chr5 | CDS | 17561655 | 17561748 | 17561655 | ID=MsG0580025369.01.T01:cds;Parent=MsG0580025369.01.T01 |
| Chr5 | CDS | 17562716 | 17562849 | 17562716 | ID=MsG0580025369.01.T01:cds;Parent=MsG0580025369.01.T01 |
| Chr5 | CDS | 17562941 | 17563104 | 17562941 | ID=MsG0580025369.01.T01:cds;Parent=MsG0580025369.01.T01 |
| Chr5 | CDS | 17563208 | 17563276 | 17563208 | ID=MsG0580025369.01.T01:cds;Parent=MsG0580025369.01.T01 |
| Chr5 | three_prime_UTR | 17563277 | 17563632 | 17563277 | ID=MsG0580025369.01.T01:three_prime_utr;Parent=MsG0580025369.01.T01 |
| Gene Sequence |
| Protein sequence |
