AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280010367.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010367.01.T01 MTR_2g082940 94.650 243 13 0 139 381 281 523 1.39e-154 446
MsG0280010367.01.T01 MTR_2g082940 65.942 138 8 1 19 117 53 190 3.13e-48 171
MsG0280010367.01.T01 MTR_2g082940 65.942 138 8 1 19 117 53 190 2.97e-49 171
MsG0280010367.01.T01 MTR_2g082940 94.048 84 5 0 139 222 281 364 1.39e-42 153
MsG0280010367.01.T01 MTR_4g081220 56.349 126 55 0 133 258 280 405 6.12e-32 128
MsG0280010367.01.T01 MTR_4g081220 41.053 95 56 0 281 375 663 757 1.60e-15 79.0
MsG0280010367.01.T01 MTR_7g007510 45.455 121 60 3 139 255 226 344 4.79e-20 92.4
MsG0280010367.01.T01 MTR_7g025580 43.697 119 64 3 139 255 186 303 3.61e-15 77.4
MsG0280010367.01.T01 MTR_7g025530 43.697 119 64 3 139 255 82 199 3.92e-15 77.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010367.01.T01 AT4G04790 42.241 116 67 0 139 254 132 247 2.42e-21 96.3
MsG0280010367.01.T01 AT4G04790 37.398 123 77 0 257 379 483 605 1.31e-14 75.9
MsG0280010367.01.T01 AT4G04790 42.241 116 67 0 139 254 269 384 2.80e-21 96.3
MsG0280010367.01.T01 AT4G04790 37.398 123 77 0 257 379 620 742 9.15e-15 76.6
MsG0280010367.01.T01 AT4G04790 42.241 116 67 0 139 254 265 380 3.23e-21 96.3
MsG0280010367.01.T01 AT4G04790 37.398 123 77 0 257 379 616 738 9.99e-15 76.3
MsG0280010367.01.T01 AT4G21880 42.373 118 67 1 139 255 244 361 3.57e-19 90.1
MsG0280010367.01.T01 AT4G21880 28.079 203 132 3 173 375 526 714 4.95e-15 77.4
MsG0280010367.01.T01 AT4G21880 42.373 118 67 1 139 255 288 405 4.17e-19 89.7
MsG0280010367.01.T01 AT4G21880 28.079 203 132 3 173 375 570 758 4.89e-15 77.4

Find 79 sgRNAs with CRISPR-Local

Find 349 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCATCGACTTATCAATCTTC+TGG 0.166836 2:-68609915 None:intergenic
TGTTGCAGAAAATTATTTAT+TGG 0.184539 2:+68612901 MsG0280010367.01.T01:intron
GAATCATCTTGTGTTGTATT+TGG 0.186903 2:+68615183 MsG0280010367.01.T01:CDS
CTCTATAGCGAAGGTATTTC+AGG 0.204333 2:+68613003 MsG0280010367.01.T01:CDS
GTATTTGGAATAAGCGTTTA+AGG 0.226232 2:+68615198 MsG0280010367.01.T01:CDS
ACATTGCAATTGAAGAAATA+TGG 0.227790 2:+68612079 MsG0280010367.01.T01:CDS
TGAACGGAAGGAGAATATTT+TGG 0.241072 2:+68612937 MsG0280010367.01.T01:CDS
AAACATGCATGTTTCAAAAT+TGG 0.278678 2:+68612753 MsG0280010367.01.T01:CDS
CACTTGCTTTGAAGTCTAAA+AGG 0.279870 2:-68613066 None:intergenic
TATATATACCCCTCTTATTA+AGG 0.290188 2:-68616077 None:intergenic
GCATCAACTTTCTCGGTATC+AGG 0.309961 2:-68611770 None:intergenic
GATTTCCTTACCGATAAATC+TGG 0.343525 2:-68613457 None:intergenic
TTTGGAGGTGTTGGAAATCA+TGG 0.355242 2:+68612955 MsG0280010367.01.T01:CDS
CATGCAAGTTTGCCGATGAT+TGG 0.365015 2:-68615936 None:intergenic
GGCATTGGGAAGACTACTAT+TGG 0.381092 2:+68613024 MsG0280010367.01.T01:CDS
TGAAGGATAAGCTTGGTCTT+TGG 0.385335 2:+68615975 MsG0280010367.01.T01:CDS
AACTAAATGATACATCCTAT+TGG 0.386920 2:+68615144 MsG0280010367.01.T01:CDS
TATGAATGTTCTCTTTGATA+AGG 0.386943 2:+68615368 MsG0280010367.01.T01:CDS
ATTTGCAGCATCAACTTTCT+CGG 0.387502 2:-68611777 None:intergenic
AGCATTATGTGAATTATCAT+TGG 0.388644 2:-68616044 None:intergenic
AGTCAGCATTCCAGATTTAT+CGG 0.389720 2:+68613447 MsG0280010367.01.T01:CDS
TAAGTTACAAATTGATGAAC+TGG 0.393574 2:+68615344 MsG0280010367.01.T01:CDS
ATATTACTCTGAGGTACGTT+TGG 0.413517 2:-68611833 None:intergenic
CATCGACTTATCAATCTTCT+GGG 0.417604 2:-68609914 None:intergenic
TTGGTGTTCTTGAAGGTTGA+GGG 0.422482 2:+68614633 MsG0280010367.01.T01:intron
CATTGCAATTGAAGAAATAT+GGG 0.425095 2:+68612080 MsG0280010367.01.T01:CDS
AGCGAAGGTATTTCAGGCAT+TGG 0.426028 2:+68613009 MsG0280010367.01.T01:CDS
CCTTGAGTTGTTTGATAAAG+TGG 0.426773 2:+68611978 MsG0280010367.01.T01:CDS
AAATTGGTGCATCCACTGTC+TGG 0.437855 2:+68612769 MsG0280010367.01.T01:CDS
AAAAGGAGCTCCTCTGCAAC+AGG 0.440881 2:-68613049 None:intergenic
TCGTAGAAATTGTTGTTTGT+GGG 0.445232 2:-68616158 None:intergenic
GCGAAGGTATTTCAGGCATT+GGG 0.450482 2:+68613010 MsG0280010367.01.T01:CDS
GAATGAGGCTCCTTAATAAG+AGG 0.454545 2:+68616067 MsG0280010367.01.T01:exon
GTGCTGGTGTACATACAAAT+TGG 0.458212 2:+68616134 MsG0280010367.01.T01:three_prime_UTR
ACTTTGCTACTACCAACAAT+AGG 0.471995 2:+68616112 MsG0280010367.01.T01:three_prime_UTR
GGGAGGCATAAATAAATTCA+AGG 0.475927 2:+68614653 MsG0280010367.01.T01:CDS
TTCGTAGAAATTGTTGTTTG+TGG 0.476336 2:-68616159 None:intergenic
GCAGCAAGCATCATTCCAAT+AGG 0.477176 2:-68615159 None:intergenic
AAATTTGCATGGGTAAAGCT+AGG 0.502554 2:+68612040 MsG0280010367.01.T01:CDS
GCATTGTATCCTTTCACGCC+TGG 0.508185 2:-68612009 None:intergenic
CCACTTTATCAAACAACTCA+AGG 0.516462 2:-68611978 None:intergenic
TTAGAAATGAAGGATAAGCT+TGG 0.520450 2:+68615968 MsG0280010367.01.T01:CDS
TGATTTGTGTAAGCTTCTCA+AGG 0.534047 2:+68615320 MsG0280010367.01.T01:CDS
CAATCATCGGCAAACTTGCA+TGG 0.537585 2:+68615937 MsG0280010367.01.T01:CDS
TGCATTGGTAGAAATTTGCA+TGG 0.541268 2:+68612029 MsG0280010367.01.T01:CDS
AATTCACATAATGCTGAATG+AGG 0.542846 2:+68616052 MsG0280010367.01.T01:CDS
ACACTTACCGTAGAAAATAG+AGG 0.544534 2:-68611013 None:intergenic
CTTGAGTTGTTTGATAAAGT+GGG 0.545096 2:+68611979 MsG0280010367.01.T01:CDS
GGACGAAAACCAGGCGTGAA+AGG 0.549368 2:+68612000 MsG0280010367.01.T01:CDS
TGTACACCAGCACCTATTGT+TGG 0.550756 2:-68616124 None:intergenic
ATCTGTTGGCTCTATAGCGA+AGG 0.552442 2:+68612994 MsG0280010367.01.T01:CDS
GATAAAGTGGGACGAAAACC+AGG 0.553212 2:+68611991 MsG0280010367.01.T01:CDS
AATTTGCATGGGTAAAGCTA+GGG 0.557559 2:+68612041 MsG0280010367.01.T01:CDS
CTACTACCAACAATAGGTGC+TGG 0.558631 2:+68616118 MsG0280010367.01.T01:three_prime_UTR
TTATCATTGGCATTTGCAGA+AGG 0.563671 2:-68616031 None:intergenic
TTCTCATATGACGAGGAAGA+AGG 0.564646 2:-68614702 None:intergenic
TCAATTGCTTCTGCTACTTG+AGG 0.571404 2:+68615121 MsG0280010367.01.T01:CDS
ACGTAACTGTGCATTGCTCA+AGG 0.571959 2:+68614734 MsG0280010367.01.T01:CDS
GACTGTGTAACTAGCAATGA+AGG 0.573585 2:-68613428 None:intergenic
TATTTATTGGCTCTTGTGAG+AGG 0.577538 2:+68612914 MsG0280010367.01.T01:CDS
TAGGAGCACACTTGTTCCGA+TGG 0.579047 2:+68615089 MsG0280010367.01.T01:intron
AATGAGGCTCCTTAATAAGA+GGG 0.586870 2:+68616068 MsG0280010367.01.T01:exon
GTGTTCTTGAAGGTTGAGGG+AGG 0.593561 2:+68614636 MsG0280010367.01.T01:intron
CAATTGAAGAAATATGGGGA+AGG 0.599112 2:+68612085 MsG0280010367.01.T01:CDS
TGGCTCTTGTGAGAGGTGAA+CGG 0.601682 2:+68612921 MsG0280010367.01.T01:CDS
CGTGAAAGGATACAATGCAT+TGG 0.602128 2:+68612014 MsG0280010367.01.T01:CDS
TCTTGTGAGAGGTGAACGGA+AGG 0.609240 2:+68612925 MsG0280010367.01.T01:CDS
AAGAGTCAGAAACCAATCAT+CGG 0.615923 2:+68615924 MsG0280010367.01.T01:CDS
TGCAGATGAATTGTCTGAAG+CGG 0.616945 2:+68610975 MsG0280010367.01.T01:intron
CAATTGATCGAACTCTCCAT+CGG 0.626889 2:-68615105 None:intergenic
ACTATTGGAACCTGTTGCAG+AGG 0.644044 2:+68613039 MsG0280010367.01.T01:CDS
ATTGCAATTGAAGAAATATG+GGG 0.648927 2:+68612081 MsG0280010367.01.T01:CDS
GCATTGGTAGAAATTTGCAT+GGG 0.653918 2:+68612030 MsG0280010367.01.T01:CDS
TATGTCTCCAAACCAGACAG+TGG 0.675812 2:-68612781 None:intergenic
TCGATGAGAAGTCACTACAA+TGG 0.682324 2:+68609931 MsG0280010367.01.T01:CDS
CACTTTATCAAACAACTCAA+GGG 0.689617 2:-68611977 None:intergenic
ATGAGGCTCCTTAATAAGAG+GGG 0.691913 2:+68616069 MsG0280010367.01.T01:exon
GTGCAAGATACTAGGAACTG+AGG 0.699618 2:+68611951 MsG0280010367.01.T01:intron
AATGAGCTTCTCATATGACG+AGG 0.715279 2:-68614709 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATAGTTAATTTATTCAT+AGG - Chr2:68611378-68611397 None:intergenic 10.0%
!! AATTTGTCTTTATTGTTAAA+TGG + Chr2:68610196-68610215 MsG0280010367.01.T01:intron 15.0%
!!! ATAAAAACTTCAATTTTTTC+TGG + Chr2:68610822-68610841 MsG0280010367.01.T01:intron 15.0%
!!! GAAGTTTTTATTAATTATTC+TGG - Chr2:68610813-68610832 None:intergenic 15.0%
!!! TAAAAACTTCAATTTTTTCT+GGG + Chr2:68610823-68610842 MsG0280010367.01.T01:intron 15.0%
!!! TAATTTTCTTACAAATGTAA+TGG - Chr2:68612612-68612631 None:intergenic 15.0%
!!! TTTTATATTTACACTAACAT+TGG + Chr2:68615230-68615249 MsG0280010367.01.T01:intron 15.0%
!! AGGAAGATAAAGTAAATTTA+TGG - Chr2:68614953-68614972 None:intergenic 20.0%
!! AGGTAAAAAATTATAGAGAA+AGG - Chr2:68613348-68613367 None:intergenic 20.0%
!! ATAAATTGTGGTTAATATAG+TGG - Chr2:68610789-68610808 None:intergenic 20.0%
!! ATAGTTAATTTATTCATAGG+AGG - Chr2:68611375-68611394 None:intergenic 20.0%
!! ATATACACAACTTACTTTAA+TGG - Chr2:68614899-68614918 None:intergenic 20.0%
!! ATTTACTTGAATCATATCAA+CGG - Chr2:68609965-68609984 None:intergenic 20.0%
!! GAAGATAAAGTAAATTTATG+GGG - Chr2:68614951-68614970 None:intergenic 20.0%
!! GCATTAATTGACATAAATTA+AGG + Chr2:68613206-68613225 MsG0280010367.01.T01:intron 20.0%
!! GGAAGATAAAGTAAATTTAT+GGG - Chr2:68614952-68614971 None:intergenic 20.0%
!! GGTAAAAAATTATAGAGAAA+GGG - Chr2:68613347-68613366 None:intergenic 20.0%
!! GTTAATATGAAGAAAAATTC+AGG + Chr2:68612298-68612317 MsG0280010367.01.T01:intron 20.0%
!! TAAGTTGTGTATATTTAAGT+TGG + Chr2:68614905-68614924 MsG0280010367.01.T01:intron 20.0%
!! TATATTGAAGAAAACAATCT+GGG + Chr2:68610884-68610903 MsG0280010367.01.T01:intron 20.0%
!! TCATACAATTTGCATAAAAA+GGG - Chr2:68615406-68615425 None:intergenic 20.0%
!! TGTTGCAGAAAATTATTTAT+TGG + Chr2:68612901-68612920 MsG0280010367.01.T01:intron 20.0%
!! TTATATTGAAGAAAACAATC+TGG + Chr2:68610883-68610902 MsG0280010367.01.T01:intron 20.0%
!! TTCATACAATTTGCATAAAA+AGG - Chr2:68615407-68615426 None:intergenic 20.0%
!!! AAGTTGTGTATATTTAAGTT+GGG + Chr2:68614906-68614925 MsG0280010367.01.T01:intron 20.0%
!!! ATTTTGACCAATTACATTAA+TGG + Chr2:68610854-68610873 MsG0280010367.01.T01:intron 20.0%
!!! GTTTGTCATAATTTATTTCT+TGG + Chr2:68612411-68612430 MsG0280010367.01.T01:intron 20.0%
!!! GTTTTTAGAGTTTATTATGA+TGG + Chr2:68613302-68613321 MsG0280010367.01.T01:intron 20.0%
!!! TAATTTTCTGCAACATAAAT+TGG - Chr2:68612896-68612915 None:intergenic 20.0%
!!! TATCTTTCTTTTTATAGACA+AGG - Chr2:68614805-68614824 None:intergenic 20.0%
!!! TTAACAGATATTTTGTTTCA+AGG + Chr2:68612848-68612867 MsG0280010367.01.T01:intron 20.0%
!!! TTTTGACCAATTACATTAAT+GGG + Chr2:68610855-68610874 MsG0280010367.01.T01:intron 20.0%
! AAACATGCATGTTTCAAAAT+TGG + Chr2:68612753-68612772 MsG0280010367.01.T01:CDS 25.0%
! AACTAAATGATACATCCTAT+TGG + Chr2:68615144-68615163 MsG0280010367.01.T01:CDS 25.0%
! AAGAAAGATAATCTAGTACT+CGG + Chr2:68614815-68614834 MsG0280010367.01.T01:intron 25.0%
! AATTATTCTGGCATAAATTG+TGG - Chr2:68610801-68610820 None:intergenic 25.0%
! ACAATACCCATTAATGTAAT+TGG - Chr2:68610864-68610883 None:intergenic 25.0%
! ACATTGCAATTGAAGAAATA+TGG + Chr2:68612079-68612098 MsG0280010367.01.T01:CDS 25.0%
! AGCATTATGTGAATTATCAT+TGG - Chr2:68616047-68616066 None:intergenic 25.0%
! ATAAAAAAGCTTTCATCTGT+TGG + Chr2:68612980-68612999 MsG0280010367.01.T01:CDS 25.0%
! ATCTCACTAAAATATGTACA+AGG - Chr2:68613368-68613387 None:intergenic 25.0%
! ATGAAAAAGAAGAAGAATGA+AGG - Chr2:68610676-68610695 None:intergenic 25.0%
! ATTCTAATCCAAAATTCAAG+AGG + Chr2:68609983-68610002 MsG0280010367.01.T01:intron 25.0%
! ATTGCAATTGAAGAAATATG+GGG + Chr2:68612081-68612100 MsG0280010367.01.T01:CDS 25.0%
! CAATTGTATACAAAAGAAGT+GGG - Chr2:68612171-68612190 None:intergenic 25.0%
! CATTGCAATTGAAGAAATAT+GGG + Chr2:68612080-68612099 MsG0280010367.01.T01:CDS 25.0%
! CTTGTATTGTAGATTTATGT+TGG + Chr2:68614367-68614386 MsG0280010367.01.T01:intron 25.0%
! GTATTGTTCTTACTTATTTC+AGG + Chr2:68611728-68611747 MsG0280010367.01.T01:intron 25.0%
! GTTCCTTCATTAAATCAAAA+AGG - Chr2:68612118-68612137 None:intergenic 25.0%
! GTTTCTACTCAATATAAATC+AGG - Chr2:68614418-68614437 None:intergenic 25.0%
! TAAGTTACAAATTGATGAAC+TGG + Chr2:68615344-68615363 MsG0280010367.01.T01:CDS 25.0%
! TAGAGTTTATTATGATGGTA+TGG + Chr2:68613307-68613326 MsG0280010367.01.T01:intron 25.0%
! TATATATACCCCTCTTATTA+AGG - Chr2:68616080-68616099 None:intergenic 25.0%
! TATGAATGTTCTCTTTGATA+AGG + Chr2:68615368-68615387 MsG0280010367.01.T01:CDS 25.0%
! TCAATTGTATACAAAAGAAG+TGG - Chr2:68612172-68612191 None:intergenic 25.0%
!! AAATCTGTTTGTCATGTTTT+TGG - Chr2:68614872-68614891 None:intergenic 25.0%
!! AATAAACTCTAAAAACACAC+TGG - Chr2:68613298-68613317 None:intergenic 25.0%
!! ATCAAGTAGTATGAGATTTT+CGG + Chr2:68613929-68613948 MsG0280010367.01.T01:intron 25.0%
!! ATTTTTGTCTGCATGATTAT+AGG + Chr2:68615886-68615905 MsG0280010367.01.T01:intron 25.0%
!! CTTTTGTATACAATTGACAT+GGG + Chr2:68612175-68612194 MsG0280010367.01.T01:intron 25.0%
!! GGAGAATAGTCAATTTTAAA+GGG - Chr2:68610300-68610319 None:intergenic 25.0%
!! TCAAGAATACATTTTTGACA+AGG - Chr2:68614973-68614992 None:intergenic 25.0%
!! TCTTTTGTATACAATTGACA+TGG + Chr2:68612174-68612193 MsG0280010367.01.T01:intron 25.0%
!! TGGAGAATAGTCAATTTTAA+AGG - Chr2:68610301-68610320 None:intergenic 25.0%
!! TTTGATTTAATGAAGGAACA+AGG + Chr2:68612119-68612138 MsG0280010367.01.T01:intron 25.0%
!! TTTTATTCATGCATGTTCTT+TGG + Chr2:68614543-68614562 MsG0280010367.01.T01:intron 25.0%
!!! AATTTTGAAACATGCATGTT+TGG - Chr2:68612754-68612773 None:intergenic 25.0%
!!! ACTTTTTCGTACAAAGTTAT+TGG + Chr2:68610258-68610277 MsG0280010367.01.T01:intron 25.0%
!!! GCTTATGTTGATTTTGATTT+TGG + Chr2:68615284-68615303 MsG0280010367.01.T01:intron 25.0%
!!! TCACCTTTTTGATTTAATGA+AGG + Chr2:68612112-68612131 MsG0280010367.01.T01:intron 25.0%
!!! TGCAAATAGTTCTAATAATG+TGG - Chr2:68610619-68610638 None:intergenic 25.0%
AACACGATCAAACTTATATG+TGG + Chr2:68615591-68615610 MsG0280010367.01.T01:intron 30.0%
AACCTTTGACAATTTGATTG+TGG - Chr2:68614522-68614541 None:intergenic 30.0%
AAGTATGTCCAGTCTTTATA+AGG + Chr2:68615484-68615503 MsG0280010367.01.T01:intron 30.0%
AATCTCATACTACTTGATGT+AGG - Chr2:68613927-68613946 None:intergenic 30.0%
AATTCACATAATGCTGAATG+AGG + Chr2:68616052-68616071 MsG0280010367.01.T01:CDS 30.0%
ACTATTCTCTAGACAAACAT+TGG + Chr2:68610129-68610148 MsG0280010367.01.T01:intron 30.0%
AGAAGAATGAAGGTTGAATT+TGG - Chr2:68610666-68610685 None:intergenic 30.0%
AGAATAGGTCCAAACTTTAA+AGG - Chr2:68613715-68613734 None:intergenic 30.0%
AGAGTAATATATCATTGCGA+AGG + Chr2:68611846-68611865 MsG0280010367.01.T01:intron 30.0%
AGGCTGCAAATATATTTCTT+TGG + Chr2:68613226-68613245 MsG0280010367.01.T01:intron 30.0%
AGTTTATTATGATGGTATGG+AGG + Chr2:68613310-68613329 MsG0280010367.01.T01:intron 30.0%
ATTCATAGGAGGTGAAAAAA+GGG - Chr2:68611364-68611383 None:intergenic 30.0%
CACTTTATCAAACAACTCAA+GGG - Chr2:68611980-68611999 None:intergenic 30.0%
CTGTCATATTATCAAAGAAG+AGG + Chr2:68612222-68612241 MsG0280010367.01.T01:intron 30.0%
GAATCATCTTGTGTTGTATT+TGG + Chr2:68615183-68615202 MsG0280010367.01.T01:CDS 30.0%
GCACAAAAACTACAGAATTT+GGG - Chr2:68615563-68615582 None:intergenic 30.0%
GTAACACAAAAATGTGAAAC+TGG - Chr2:68613567-68613586 None:intergenic 30.0%
GTTTATTATGATGGTATGGA+GGG + Chr2:68613311-68613330 MsG0280010367.01.T01:intron 30.0%
TACACTAATAGTAGTTCAAG+TGG - Chr2:68611711-68611730 None:intergenic 30.0%
TAGCGCAAGATTATTCAAAA+TGG + Chr2:68614344-68614363 MsG0280010367.01.T01:intron 30.0%
TATGCTCAAACTTCTATCAT+TGG + Chr2:68612438-68612457 MsG0280010367.01.T01:intron 30.0%
TATTCATAGGAGGTGAAAAA+AGG - Chr2:68611365-68611384 None:intergenic 30.0%
TCTTAGAAGCTATATCGAAA+GGG - Chr2:68613981-68614000 None:intergenic 30.0%
TGAACATCAATGTACAGAAA+AGG - Chr2:68612825-68612844 None:intergenic 30.0%
TGCACAAAAACTACAGAATT+TGG - Chr2:68615564-68615583 None:intergenic 30.0%
TGCATAAAGTAAGTACTTCA+GGG - Chr2:68613518-68613537 None:intergenic 30.0%
TGTTTCATCTGATGTATTGT+TGG + Chr2:68614614-68614633 MsG0280010367.01.T01:intron 30.0%
TTAGAAATGAAGGATAAGCT+TGG + Chr2:68615968-68615987 MsG0280010367.01.T01:CDS 30.0%
TTGCACAACTTTCAATTAAG+CGG - Chr2:68611937-68611956 None:intergenic 30.0%
TTGTTCTTACTTATTTCAGG+TGG + Chr2:68611731-68611750 MsG0280010367.01.T01:intron 30.0%
! ATATGACACCTCTTGAATTT+TGG - Chr2:68609994-68610013 None:intergenic 30.0%
! CAGATTTCCTCTATTTTCTA+CGG + Chr2:68611006-68611025 MsG0280010367.01.T01:CDS 30.0%
! CTTGAGTTGTTTGATAAAGT+GGG + Chr2:68611979-68611998 MsG0280010367.01.T01:CDS 30.0%
! GAATCGTAACATTTTTGTGA+AGG - Chr2:68616001-68616020 None:intergenic 30.0%
! GTATTTGGAATAAGCGTTTA+AGG + Chr2:68615198-68615217 MsG0280010367.01.T01:CDS 30.0%
! TATCTTCTTGTTGTAACCTT+CGG + Chr2:68613105-68613124 MsG0280010367.01.T01:intron 30.0%
! TCTTTTTATAGACAAGGTTC+TGG - Chr2:68614799-68614818 None:intergenic 30.0%
! TTTTGTGATCCTACATCAAT+TGG + Chr2:68615461-68615480 MsG0280010367.01.T01:intron 30.0%
!! CTGTTTCTGTAATGTAGAAA+TGG - Chr2:68610529-68610548 None:intergenic 30.0%
!! GAATAGTCAATTTTAAAGGG+TGG - Chr2:68610297-68610316 None:intergenic 30.0%
!! GTAGAGTATTTTAAGTAGCT+TGG + Chr2:68613951-68613970 MsG0280010367.01.T01:intron 30.0%
!! TCAGGGTTTAATTTGAGAAT+AGG - Chr2:68613730-68613749 None:intergenic 30.0%
!! TCGTAGAAATTGTTGTTTGT+GGG - Chr2:68616161-68616180 None:intergenic 30.0%
!! TTCGTAGAAATTGTTGTTTG+TGG - Chr2:68616162-68616181 None:intergenic 30.0%
!!! CTAACTTTTGGAATTGAGTT+AGG + Chr2:68615531-68615550 MsG0280010367.01.T01:intron 30.0%
!!! GGAGTTGTTTTTAGAAATGA+AGG + Chr2:68615958-68615977 MsG0280010367.01.T01:CDS 30.0%
!!! TCGATTTTTTACACAGAACT+GGG + Chr2:68613766-68613785 MsG0280010367.01.T01:intron 30.0%
!!! TGTATGTGTCTGTTTTGATT+AGG + Chr2:68611056-68611075 MsG0280010367.01.T01:intron 30.0%
!!! TGTCTGTTTTGATTAGGATA+TGG + Chr2:68611062-68611081 MsG0280010367.01.T01:intron 30.0%
!!! TTCGATTTTTTACACAGAAC+TGG + Chr2:68613765-68613784 MsG0280010367.01.T01:intron 30.0%
AAAACTACAGAATTTGGGAG+CGG - Chr2:68615558-68615577 None:intergenic 35.0%
AAAATCACCGTAAACCTAAC+TGG + Chr2:68610094-68610113 MsG0280010367.01.T01:intron 35.0%
AAATCACCGTAAACCTAACT+GGG + Chr2:68610095-68610114 MsG0280010367.01.T01:intron 35.0%
AAATTTGCATGGGTAAAGCT+AGG + Chr2:68612040-68612059 MsG0280010367.01.T01:CDS 35.0%
AACATTGCTGAGTTACTCTA+AGG - Chr2:68611508-68611527 None:intergenic 35.0%
AAGAGTCAGAAACCAATCAT+CGG + Chr2:68615924-68615943 MsG0280010367.01.T01:CDS 35.0%
AATACCAATAACATAAGCGC+AGG + Chr2:68613688-68613707 MsG0280010367.01.T01:intron 35.0%
AATGAGGCTCCTTAATAAGA+GGG + Chr2:68616068-68616087 MsG0280010367.01.T01:exon 35.0%
AATTTGCATGGGTAAAGCTA+GGG + Chr2:68612041-68612060 MsG0280010367.01.T01:CDS 35.0%
ACAAGTCAACTTGTATGCTA+TGG - Chr2:68615855-68615874 None:intergenic 35.0%
ACACTTACCGTAGAAAATAG+AGG - Chr2:68611016-68611035 None:intergenic 35.0%
ACAGAACAGTGACTTTGTTA+TGG - Chr2:68615026-68615045 None:intergenic 35.0%
ACATTGCTGAGTTACTCTAA+GGG - Chr2:68611507-68611526 None:intergenic 35.0%
ACTGGGATGTATCCTAAAAA+CGG + Chr2:68613783-68613802 MsG0280010367.01.T01:intron 35.0%
ACTTTGCTACTACCAACAAT+AGG + Chr2:68616112-68616131 MsG0280010367.01.T01:three_prime_UTR 35.0%
AGAATGAAGGTTGAATTTGG+TGG - Chr2:68610663-68610682 None:intergenic 35.0%
AGTCAGCATTCCAGATTTAT+CGG + Chr2:68613447-68613466 MsG0280010367.01.T01:CDS 35.0%
ATACTACTTGATGTAGGACT+TGG - Chr2:68613921-68613940 None:intergenic 35.0%
ATTCCAAAAGTTAGCTCAAG+AGG - Chr2:68615525-68615544 None:intergenic 35.0%
ATTCTCCATCGAAAAACTTG+TGG + Chr2:68610313-68610332 MsG0280010367.01.T01:intron 35.0%
ATTTGAGAAAAGTAACCACG+TGG - Chr2:68611258-68611277 None:intergenic 35.0%
ATTTGCAGCATCAACTTTCT+CGG - Chr2:68611780-68611799 None:intergenic 35.0%
CAATTGAAGAAATATGGGGA+AGG + Chr2:68612085-68612104 MsG0280010367.01.T01:CDS 35.0%
CATAGTTCCATGTGAACATT+TGG + Chr2:68614496-68614515 MsG0280010367.01.T01:intron 35.0%
CATTATTCTTTCCAAACCGA+AGG - Chr2:68613124-68613143 None:intergenic 35.0%
CCACTTTATCAAACAACTCA+AGG - Chr2:68611981-68612000 None:intergenic 35.0%
CGCAATGATATATTACTCTG+AGG - Chr2:68611845-68611864 None:intergenic 35.0%
CTCTTAGAAGCTATATCGAA+AGG - Chr2:68613982-68614001 None:intergenic 35.0%
CTGCATAAAGTAAGTACTTC+AGG - Chr2:68613519-68613538 None:intergenic 35.0%
GAAACTGGTGATATAGTTCT+AGG - Chr2:68613552-68613571 None:intergenic 35.0%
GAACTTGCGAGTATATGTTA+CGG - Chr2:68612471-68612490 None:intergenic 35.0%
GAATGAAGGTTGAATTTGGT+GGG - Chr2:68610662-68610681 None:intergenic 35.0%
GACATACTTCCAATTGATGT+AGG - Chr2:68615473-68615492 None:intergenic 35.0%
GATTTCCTTACCGATAAATC+TGG - Chr2:68613460-68613479 None:intergenic 35.0%
GTATACAATTGACATGGGTA+TGG + Chr2:68612180-68612199 MsG0280010367.01.T01:intron 35.0%
GTCCAGTCTTTATAAGGATT+AGG + Chr2:68615490-68615509 MsG0280010367.01.T01:intron 35.0%
GTTACTATGAAATGATGCTG+TGG + Chr2:68612269-68612288 MsG0280010367.01.T01:intron 35.0%
TAAAGAACTGCGTCTATCAA+AGG - Chr2:68614253-68614272 None:intergenic 35.0%
TAAGAAACCTAGAGCAGAAT+TGG + Chr2:68614317-68614336 MsG0280010367.01.T01:intron 35.0%
TAATGTTAGCGTCATGTTAG+TGG + Chr2:68611449-68611468 MsG0280010367.01.T01:intron 35.0%
TACATAGTGTTGTCACATAG+AGG + Chr2:68611597-68611616 MsG0280010367.01.T01:intron 35.0%
TGAAAGTTGTGCAAGATACT+AGG + Chr2:68611943-68611962 MsG0280010367.01.T01:intron 35.0%
TGATACAGTGTTGTCAATTG+TGG - Chr2:68615793-68615812 None:intergenic 35.0%
TGATGGGACTTAAGTACTAT+GGG + Chr2:68613891-68613910 MsG0280010367.01.T01:intron 35.0%
TGCCTAATCCTTATAAAGAC+TGG - Chr2:68615495-68615514 None:intergenic 35.0%
TTATCATTGGCATTTGCAGA+AGG - Chr2:68616034-68616053 None:intergenic 35.0%
TTATGACCCAGTTAGGTTTA+CGG - Chr2:68610104-68610123 None:intergenic 35.0%
TTCAATGTTGACAAGAAGCA+TGG + Chr2:68615434-68615453 MsG0280010367.01.T01:intron 35.0%
TTCATAGGAGGTGAAAAAAG+GGG - Chr2:68611363-68611382 None:intergenic 35.0%
TTCTCCATCGAAAAACTTGT+GGG + Chr2:68610314-68610333 MsG0280010367.01.T01:intron 35.0%
TTGATGGGACTTAAGTACTA+TGG + Chr2:68613890-68613909 MsG0280010367.01.T01:intron 35.0%
TTTAAGGGACAGTTTCCTAA+GGG + Chr2:68614206-68614225 MsG0280010367.01.T01:intron 35.0%
TTTCAATTAAGCGGCGAAAA+CGG - Chr2:68611928-68611947 None:intergenic 35.0%
! AACAGTGACTTTGTTATGGA+AGG - Chr2:68615022-68615041 None:intergenic 35.0%
! AACTCGAGTTCTTTTTCTAG+AGG + Chr2:68613821-68613840 MsG0280010367.01.T01:intron 35.0%
! ACACTCTTTGATGCTTTGTT+CGG - Chr2:68614046-68614065 None:intergenic 35.0%
! ACAGTGACTTTGTTATGGAA+GGG - Chr2:68615021-68615040 None:intergenic 35.0%
! ATAGGGACTTGGATATTTTG+GGG + Chr2:68614102-68614121 MsG0280010367.01.T01:intron 35.0%
! ATATAGCTTCTAAGAGAGGT+TGG + Chr2:68613986-68614005 MsG0280010367.01.T01:intron 35.0%
! CCTTGAGTTGTTTGATAAAG+TGG + Chr2:68611978-68611997 MsG0280010367.01.T01:CDS 35.0%
! CTTTTAGACTTCAAAGCAAG+TGG + Chr2:68613067-68613086 MsG0280010367.01.T01:CDS 35.0%
! GATAGGGACTTGGATATTTT+GGG + Chr2:68614101-68614120 MsG0280010367.01.T01:intron 35.0%
! GCATTGGTAGAAATTTGCAT+GGG + Chr2:68612030-68612049 MsG0280010367.01.T01:CDS 35.0%
! GGGAGGCATAAATAAATTCA+AGG + Chr2:68614653-68614672 MsG0280010367.01.T01:CDS 35.0%
! TATAGCTTCTAAGAGAGGTT+GGG + Chr2:68613987-68614006 MsG0280010367.01.T01:intron 35.0%
! TATTTTGTCCGTGTTTTGTG+TGG + Chr2:68612549-68612568 MsG0280010367.01.T01:intron 35.0%
! TGAACGGAAGGAGAATATTT+TGG + Chr2:68612937-68612956 MsG0280010367.01.T01:CDS 35.0%
! TGATAGGGACTTGGATATTT+TGG + Chr2:68614100-68614119 MsG0280010367.01.T01:intron 35.0%
! TGATTTGTGTAAGCTTCTCA+AGG + Chr2:68615320-68615339 MsG0280010367.01.T01:CDS 35.0%
! TGCATTGGTAGAAATTTGCA+TGG + Chr2:68612029-68612048 MsG0280010367.01.T01:CDS 35.0%
! TGTATTGTTGGTGTTCTTGA+AGG + Chr2:68614626-68614645 MsG0280010367.01.T01:intron 35.0%
! TGTTTGGTGGAAAGTTTAAG+TGG + Chr2:68614155-68614174 MsG0280010367.01.T01:intron 35.0%
! TTCGATATAGCTTCTAAGAG+AGG + Chr2:68613982-68614001 MsG0280010367.01.T01:intron 35.0%
!! ATATTACTCTGAGGTACGTT+TGG - Chr2:68611836-68611855 None:intergenic 35.0%
!! CACTTGCTTTGAAGTCTAAA+AGG - Chr2:68613069-68613088 None:intergenic 35.0%
!! CATCGACTTATCAATCTTCT+GGG - Chr2:68609917-68609936 None:intergenic 35.0%
!! CTGTTTTCTTGTTGTCTGAA+AGG + Chr2:68611405-68611424 MsG0280010367.01.T01:intron 35.0%
!! TATTTATTGGCTCTTGTGAG+AGG + Chr2:68612914-68612933 MsG0280010367.01.T01:CDS 35.0%
!! TCATCGACTTATCAATCTTC+TGG - Chr2:68609918-68609937 None:intergenic 35.0%
!! TTTTAAGGGACAGTTTCCTA+AGG + Chr2:68614205-68614224 MsG0280010367.01.T01:intron 35.0%
!!! ACACTTTTGATTTACGAGGT+GGG + Chr2:68612357-68612376 MsG0280010367.01.T01:intron 35.0%
AAACTACAGAATTTGGGAGC+GGG - Chr2:68615557-68615576 None:intergenic 40.0%
AACTTGTGGGACAAGTAAGA+TGG + Chr2:68610327-68610346 MsG0280010367.01.T01:intron 40.0%
AAGTAGCATAGGATGTTTGG+TGG + Chr2:68614142-68614161 MsG0280010367.01.T01:intron 40.0%
AATGAGCTTCTCATATGACG+AGG - Chr2:68614712-68614731 None:intergenic 40.0%
ACTTGTGGGACAAGTAAGAT+GGG + Chr2:68610328-68610347 MsG0280010367.01.T01:intron 40.0%
AGCGTGCATTTATAGAGAGA+AGG + Chr2:68610159-68610178 MsG0280010367.01.T01:intron 40.0%
AGTCTCATGTCAAGTAGCAT+AGG + Chr2:68614131-68614150 MsG0280010367.01.T01:intron 40.0%
ATCTGAATGCTATGCCTCAT+AGG + Chr2:68615070-68615089 MsG0280010367.01.T01:intron 40.0%
ATGAGGCTCCTTAATAAGAG+GGG + Chr2:68616069-68616088 MsG0280010367.01.T01:exon 40.0%
ATGGGACTTAAGTACTATGG+GGG + Chr2:68613893-68613912 MsG0280010367.01.T01:intron 40.0%
ATTGTGGCCAAATGTTCACA+TGG - Chr2:68614506-68614525 None:intergenic 40.0%
CAATTGATCGAACTCTCCAT+CGG - Chr2:68615108-68615127 None:intergenic 40.0%
CAGAAACTATATCATGCACG+AGG - Chr2:68613482-68613501 None:intergenic 40.0%
CCAATGTTGTCAATAGATCG+CGG - Chr2:68611678-68611697 None:intergenic 40.0%
CCAATTAGCCACACAAAACA+CGG - Chr2:68612560-68612579 None:intergenic 40.0%
CCTTAAAAGCTAGCTATCGA+GGG - Chr2:68614193-68614212 None:intergenic 40.0%
CGTGAAAGGATACAATGCAT+TGG + Chr2:68612014-68612033 MsG0280010367.01.T01:CDS 40.0%
CTATAGTAGTGCTTTAGTGC+TGG + Chr2:68615729-68615748 MsG0280010367.01.T01:intron 40.0%
CTGAATCAGAGTTTCGATGA+AGG - Chr2:68610757-68610776 None:intergenic 40.0%
CTGGGATGTATCCTAAAAAC+GGG + Chr2:68613784-68613803 MsG0280010367.01.T01:intron 40.0%
CTTAAAAGCTAGCTATCGAG+GGG - Chr2:68614192-68614211 None:intergenic 40.0%
CTTCATCGAAACTCTGATTC+AGG + Chr2:68610755-68610774 MsG0280010367.01.T01:intron 40.0%
GAATGAGGCTCCTTAATAAG+AGG + Chr2:68616067-68616086 MsG0280010367.01.T01:exon 40.0%
GACTGTGTAACTAGCAATGA+AGG - Chr2:68613431-68613450 None:intergenic 40.0%
GAGAAGTCACTACAATGGTA+AGG + Chr2:68609936-68609955 MsG0280010367.01.T01:intron 40.0%
GATGGGACTTAAGTACTATG+GGG + Chr2:68613892-68613911 MsG0280010367.01.T01:intron 40.0%
GCATTCCAGATTTATCGGTA+AGG + Chr2:68613452-68613471 MsG0280010367.01.T01:intron 40.0%
GGCCACAATCAAATTGTCAA+AGG + Chr2:68614517-68614536 MsG0280010367.01.T01:intron 40.0%
GTATCACTTATGACCCAGTT+AGG - Chr2:68610111-68610130 None:intergenic 40.0%
GTCAAGTAGCATAGGATGTT+TGG + Chr2:68614139-68614158 MsG0280010367.01.T01:intron 40.0%
GTGTTGTCAATTGTGGAATG+CGG - Chr2:68615786-68615805 None:intergenic 40.0%
TAGCGTCATGTTAGTGGTTA+GGG + Chr2:68611455-68611474 MsG0280010367.01.T01:intron 40.0%
TATGATGGTATGGAGGGATT+AGG + Chr2:68613317-68613336 MsG0280010367.01.T01:intron 40.0%
TCATAGGAGGTGAAAAAAGG+GGG - Chr2:68611362-68611381 None:intergenic 40.0%
TCGATGAGAAGTCACTACAA+TGG + Chr2:68609931-68609950 MsG0280010367.01.T01:CDS 40.0%
TGATAAGTATCCAAGCCCTT+AGG - Chr2:68614224-68614243 None:intergenic 40.0%
TGCAGATGAATTGTCTGAAG+CGG + Chr2:68610975-68610994 MsG0280010367.01.T01:intron 40.0%
TGGGATGTATCCTAAAAACG+GGG + Chr2:68613785-68613804 MsG0280010367.01.T01:intron 40.0%
TGTTATGGAAGGGTTCTTTG+AGG - Chr2:68615011-68615030 None:intergenic 40.0%
TTAAAAGCTAGCTATCGAGG+GGG - Chr2:68614191-68614210 None:intergenic 40.0%
TTAGCGTCATGTTAGTGGTT+AGG + Chr2:68611454-68611473 MsG0280010367.01.T01:intron 40.0%
TTCTCATATGACGAGGAAGA+AGG - Chr2:68614705-68614724 None:intergenic 40.0%
! ATGCTACTTGACATGAGACT+TGG - Chr2:68614131-68614150 None:intergenic 40.0%
! CACTAAAGCACTACTATAGC+TGG - Chr2:68615728-68615747 None:intergenic 40.0%
! GTGCTGGTGTACATACAAAT+TGG + Chr2:68616134-68616153 MsG0280010367.01.T01:three_prime_UTR 40.0%
! TCAATTGCTTCTGCTACTTG+AGG + Chr2:68615121-68615140 MsG0280010367.01.T01:CDS 40.0%
! TCACCTCTTGAGCTAACTTT+TGG + Chr2:68615519-68615538 MsG0280010367.01.T01:intron 40.0%
! TCTTGTTGTAACCTTCGGTT+TGG + Chr2:68613110-68613129 MsG0280010367.01.T01:intron 40.0%
! TGAAGGATAAGCTTGGTCTT+TGG + Chr2:68615975-68615994 MsG0280010367.01.T01:CDS 40.0%
! TTCTAAGAGAGGTTGGGAAA+GGG + Chr2:68613993-68614012 MsG0280010367.01.T01:intron 40.0%
! TTGGTGTTCTTGAAGGTTGA+GGG + Chr2:68614633-68614652 MsG0280010367.01.T01:intron 40.0%
!! ACAAGGTTCTGGAAGTAACT+TGG - Chr2:68614788-68614807 None:intergenic 40.0%
!! ACGGAAGGAGAATATTTTGG+AGG + Chr2:68612940-68612959 MsG0280010367.01.T01:CDS 40.0%
!! CTCTATAGCGAAGGTATTTC+AGG + Chr2:68613003-68613022 MsG0280010367.01.T01:CDS 40.0%
!! GGAGAATATTTTGGAGGTGT+TGG + Chr2:68612946-68612965 MsG0280010367.01.T01:CDS 40.0%
!! TGTAGCAGTGTCACTTCTAA+TGG + Chr2:68611129-68611148 MsG0280010367.01.T01:intron 40.0%
!! TTCTTGAAGTCCCCGTTTTT+AGG - Chr2:68613798-68613817 None:intergenic 40.0%
!! TTGTCCCACAAGTTTTTCGA+TGG - Chr2:68610321-68610340 None:intergenic 40.0%
!! TTTGGAGGTGTTGGAAATCA+TGG + Chr2:68612955-68612974 MsG0280010367.01.T01:CDS 40.0%
!!! CCTCGATAGCTAGCTTTTAA+GGG + Chr2:68614191-68614210 MsG0280010367.01.T01:intron 40.0%
!!! GACACTTTTGATTTACGAGG+TGG + Chr2:68612356-68612375 MsG0280010367.01.T01:intron 40.0%
!!! GACGACACTTTTGATTTACG+AGG + Chr2:68612353-68612372 MsG0280010367.01.T01:intron 40.0%
AAATTGGTGCATCCACTGTC+TGG + Chr2:68612769-68612788 MsG0280010367.01.T01:CDS 45.0%
AATGTCCTACTGCAGACTCA+GGG - Chr2:68613747-68613766 None:intergenic 45.0%
ACCCAGTCTTGCAGTTGAAT+TGG - Chr2:68612251-68612270 None:intergenic 45.0%
ACGTAACTGTGCATTGCTCA+AGG + Chr2:68614734-68614753 MsG0280010367.01.T01:CDS 45.0%
ACTATTGGAACCTGTTGCAG+AGG + Chr2:68613039-68613058 MsG0280010367.01.T01:CDS 45.0%
AGGACCTGCGCTTATGTTAT+TGG - Chr2:68613695-68613714 None:intergenic 45.0%
AGTGGTTAGGGTTTGAACCT+TGG + Chr2:68611467-68611486 MsG0280010367.01.T01:intron 45.0%
CAATCATCGGCAAACTTGCA+TGG + Chr2:68615937-68615956 MsG0280010367.01.T01:CDS 45.0%
CAGAGTTTCGATGAAGGTTG+AGG - Chr2:68610751-68610770 None:intergenic 45.0%
CAGCTGCTGTGTGAAAACAT+TGG - Chr2:68615626-68615645 None:intergenic 45.0%
CATGCAAGTTTGCCGATGAT+TGG - Chr2:68615939-68615958 None:intergenic 45.0%
CCAAACACACGATTAGTGAC+AGG - Chr2:68614576-68614595 None:intergenic 45.0%
CCCAATTCAACTGCAAGACT+GGG + Chr2:68612247-68612266 MsG0280010367.01.T01:intron 45.0%
CCCAGTCTTGCAGTTGAATT+GGG - Chr2:68612250-68612269 None:intergenic 45.0%
CCCTTAAAAGCTAGCTATCG+AGG - Chr2:68614194-68614213 None:intergenic 45.0%
CCGCGATCTATTGACAACAT+TGG + Chr2:68611675-68611694 MsG0280010367.01.T01:intron 45.0%
CCTGTCACTAATCGTGTGTT+TGG + Chr2:68614573-68614592 MsG0280010367.01.T01:intron 45.0%
CTACTACCAACAATAGGTGC+TGG + Chr2:68616118-68616137 MsG0280010367.01.T01:three_prime_UTR 45.0%
CTATCCACCAATTCTGCTCT+AGG - Chr2:68614327-68614346 None:intergenic 45.0%
GAAACCTAGAGCAGAATTGG+TGG + Chr2:68614320-68614339 MsG0280010367.01.T01:intron 45.0%
GAGAAAAGTAACCACGTGGT+CGG - Chr2:68611254-68611273 None:intergenic 45.0%
GATAAAGTGGGACGAAAACC+AGG + Chr2:68611991-68612010 MsG0280010367.01.T01:CDS 45.0%
GCAGCAAGCATCATTCCAAT+AGG - Chr2:68615162-68615181 None:intergenic 45.0%
GCATCAACTTTCTCGGTATC+AGG - Chr2:68611773-68611792 None:intergenic 45.0%
GGTGGAAAGTTTAAGTGGCT+TGG + Chr2:68614160-68614179 MsG0280010367.01.T01:intron 45.0%
GTGCAAGATACTAGGAACTG+AGG + Chr2:68611951-68611970 MsG0280010367.01.T01:intron 45.0%
GTGGGTGAATGTGTACGAAA+GGG - Chr2:68610644-68610663 None:intergenic 45.0%
TAGAAGTGACACTGCTACAG+AGG - Chr2:68611128-68611147 None:intergenic 45.0%
TATGTCTCCAAACCAGACAG+TGG - Chr2:68612784-68612803 None:intergenic 45.0%
TCCCAATTCAACTGCAAGAC+TGG + Chr2:68612246-68612265 MsG0280010367.01.T01:intron 45.0%
TGGGTGAATGTGTACGAAAG+GGG - Chr2:68610643-68610662 None:intergenic 45.0%
TGTACACCAGCACCTATTGT+TGG - Chr2:68616127-68616146 None:intergenic 45.0%
TTAAACCCTGAGTCTGCAGT+AGG + Chr2:68613739-68613758 MsG0280010367.01.T01:intron 45.0%
! ATCAAAGAGTGTAGCTTCCG+GGG + Chr2:68614054-68614073 MsG0280010367.01.T01:intron 45.0%
! CATCAAAGAGTGTAGCTTCC+GGG + Chr2:68614053-68614072 MsG0280010367.01.T01:intron 45.0%
! CCGTGTTTTGTGTGGCTAAT+TGG + Chr2:68612557-68612576 MsG0280010367.01.T01:intron 45.0%
! CTTCTAAGAGAGGTTGGGAA+AGG + Chr2:68613992-68614011 MsG0280010367.01.T01:intron 45.0%
! GCATCAAAGAGTGTAGCTTC+CGG + Chr2:68614052-68614071 MsG0280010367.01.T01:intron 45.0%
! GGCATTGGGAAGACTACTAT+TGG + Chr2:68613024-68613043 MsG0280010367.01.T01:CDS 45.0%
! GTTGGTGTTCTTGAAGGTTG+AGG + Chr2:68614632-68614651 MsG0280010367.01.T01:intron 45.0%
! TGCTGAGTTACTCTAAGGGT+TGG - Chr2:68611503-68611522 None:intergenic 45.0%
!! AGCGAAGGTATTTCAGGCAT+TGG + Chr2:68613009-68613028 MsG0280010367.01.T01:CDS 45.0%
!! AGCGCAGGTCCTTTAAAGTT+TGG + Chr2:68613703-68613722 MsG0280010367.01.T01:intron 45.0%
!! ATCTGTTGGCTCTATAGCGA+AGG + Chr2:68612994-68613013 MsG0280010367.01.T01:CDS 45.0%
!! GCGAAGGTATTTCAGGCATT+GGG + Chr2:68613010-68613029 MsG0280010367.01.T01:CDS 45.0%
!!! CCCTCGATAGCTAGCTTTTA+AGG + Chr2:68614190-68614209 MsG0280010367.01.T01:intron 45.0%
!! TTAATCAAAATAATAAAATT+AGG + Chr2:68610422-68610441 MsG0280010367.01.T01:intron 5.0%
AAAAGGAGCTCCTCTGCAAC+AGG - Chr2:68613052-68613071 None:intergenic 50.0%
CAACTCTCCCAACACCATGT+GGG + Chr2:68613857-68613876 MsG0280010367.01.T01:intron 50.0%
GAATGTCCTACTGCAGACTC+AGG - Chr2:68613748-68613767 None:intergenic 50.0%
GCAGAGCTATGATAGGGACT+TGG + Chr2:68614091-68614110 MsG0280010367.01.T01:intron 50.0%
GCATTGTATCCTTTCACGCC+TGG - Chr2:68612012-68612031 None:intergenic 50.0%
GGAACAAGTGTGCTCCTATG+AGG - Chr2:68615087-68615106 None:intergenic 50.0%
GGGTGAATGTGTACGAAAGG+GGG - Chr2:68610642-68610661 None:intergenic 50.0%
GGTGGGTGAATGTGTACGAA+AGG - Chr2:68610645-68610664 None:intergenic 50.0%
GTGTTCTTGAAGGTTGAGGG+AGG + Chr2:68614636-68614655 MsG0280010367.01.T01:intron 50.0%
TCTCGGGCAGAGCTATGATA+GGG + Chr2:68614085-68614104 MsG0280010367.01.T01:intron 50.0%
TCTTGTGAGAGGTGAACGGA+AGG + Chr2:68612925-68612944 MsG0280010367.01.T01:CDS 50.0%
TGGCTCTTGTGAGAGGTGAA+CGG + Chr2:68612921-68612940 MsG0280010367.01.T01:CDS 50.0%
TGGGCGATATGTTGCTCTTC+TGG - Chr2:68612152-68612171 None:intergenic 50.0%
TTGACAACATTGGACCTCGC+TGG + Chr2:68611685-68611704 MsG0280010367.01.T01:intron 50.0%
! GATGCTTTGTTCGGCCATTG+CGG - Chr2:68614037-68614056 None:intergenic 50.0%
! TAGGAGCACACTTGTTCCGA+TGG + Chr2:68615089-68615108 MsG0280010367.01.T01:intron 50.0%
!! AGGTTGGGAAAGGGTACCTA+TGG + Chr2:68614002-68614021 MsG0280010367.01.T01:intron 50.0%
!! GTGCTTTAGTGCTGGCGTAA+TGG + Chr2:68615737-68615756 MsG0280010367.01.T01:intron 50.0%
!! TGGGAAAGGGTACCTATGGA+GGG + Chr2:68614006-68614025 MsG0280010367.01.T01:intron 50.0%
!! TTGGGAAAGGGTACCTATGG+AGG + Chr2:68614005-68614024 MsG0280010367.01.T01:intron 50.0%
AGTAGTTCAAGTGGCCAGCG+AGG - Chr2:68611702-68611721 None:intergenic 55.0%
AGTGTAGCTTCCGGGGACAT+CGG + Chr2:68614061-68614080 MsG0280010367.01.T01:intron 55.0%
ATTGCGGTCAACCCCTCCAT+AGG - Chr2:68614021-68614040 None:intergenic 55.0%
CCAACTCTCCCAACACCATG+TGG + Chr2:68613856-68613875 MsG0280010367.01.T01:intron 55.0%
CTCTCGGGCAGAGCTATGAT+AGG + Chr2:68614084-68614103 MsG0280010367.01.T01:intron 55.0%
GATGAAGGTTGAGGCTTGCG+AGG - Chr2:68610742-68610761 None:intergenic 55.0%
GGACGAAAACCAGGCGTGAA+AGG + Chr2:68612000-68612019 MsG0280010367.01.T01:CDS 55.0%
GGGACAGTTTCCTAAGGGCT+TGG + Chr2:68614211-68614230 MsG0280010367.01.T01:intron 55.0%
GGGTTGGAGAATCAGCTCCA+AGG - Chr2:68611487-68611506 None:intergenic 55.0%
GGTGCATCCACTGTCTGGTT+TGG + Chr2:68612774-68612793 MsG0280010367.01.T01:intron 55.0%
TATGGAGGGGTTGACCGCAA+TGG + Chr2:68614020-68614039 MsG0280010367.01.T01:intron 55.0%
! CCACATGGTGTTGGGAGAGT+TGG - Chr2:68613859-68613878 None:intergenic 55.0%
!! GGGAAAGGGTACCTATGGAG+GGG + Chr2:68614007-68614026 MsG0280010367.01.T01:intron 55.0%
AGTAACCACGTGGTCGGCAC+TGG - Chr2:68611248-68611267 None:intergenic 60.0%
!! CTTCCGGGGACATCGGCTCT+CGG + Chr2:68614068-68614087 MsG0280010367.01.T01:intron 65.0%
!! CTTGTCCAGTGCCGACCACG+TGG + Chr2:68611240-68611259 MsG0280010367.01.T01:intron 65.0%
!! TTCCGGGGACATCGGCTCTC+GGG + Chr2:68614069-68614088 MsG0280010367.01.T01:intron 65.0%
TGCCCGAGAGCCGATGTCCC+CGG - Chr2:68614074-68614093 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr2 gene 68609883 68616204 68609883 ID=MsG0280010367.01;Name=MsG0280010367.01
Chr2 mRNA 68609883 68616204 68609883 ID=MsG0280010367.01.T01;Parent=MsG0280010367.01;Name=MsG0280010367.01.T01;_AED=0.50;_eAED=0.55;_QI=0|0.6|0.63|1|1|1|11|132|381
Chr2 exon 68609883 68609952 68609883 ID=MsG0280010367.01.T01:exon:5905;Parent=MsG0280010367.01.T01
Chr2 exon 68610980 68611027 68610980 ID=MsG0280010367.01.T01:exon:5906;Parent=MsG0280010367.01.T01
Chr2 exon 68611750 68611848 68611750 ID=MsG0280010367.01.T01:exon:5907;Parent=MsG0280010367.01.T01
Chr2 exon 68611965 68612106 68611965 ID=MsG0280010367.01.T01:exon:5908;Parent=MsG0280010367.01.T01
Chr2 exon 68612729 68612790 68612729 ID=MsG0280010367.01.T01:exon:5909;Parent=MsG0280010367.01.T01
Chr2 exon 68612909 68613088 68612909 ID=MsG0280010367.01.T01:exon:5910;Parent=MsG0280010367.01.T01
Chr2 exon 68613404 68613468 68613404 ID=MsG0280010367.01.T01:exon:5911;Parent=MsG0280010367.01.T01
Chr2 exon 68614648 68614755 68614648 ID=MsG0280010367.01.T01:exon:5912;Parent=MsG0280010367.01.T01
Chr2 exon 68615092 68615219 68615092 ID=MsG0280010367.01.T01:exon:5913;Parent=MsG0280010367.01.T01
Chr2 exon 68615311 68615389 68615311 ID=MsG0280010367.01.T01:exon:5914;Parent=MsG0280010367.01.T01
Chr2 exon 68615908 68616204 68615908 ID=MsG0280010367.01.T01:exon:5915;Parent=MsG0280010367.01.T01
Chr2 CDS 68609883 68609952 68609883 ID=MsG0280010367.01.T01:cds;Parent=MsG0280010367.01.T01
Chr2 CDS 68610980 68611027 68610980 ID=MsG0280010367.01.T01:cds;Parent=MsG0280010367.01.T01
Chr2 CDS 68611750 68611848 68611750 ID=MsG0280010367.01.T01:cds;Parent=MsG0280010367.01.T01
Chr2 CDS 68611965 68612106 68611965 ID=MsG0280010367.01.T01:cds;Parent=MsG0280010367.01.T01
Chr2 CDS 68612729 68612790 68612729 ID=MsG0280010367.01.T01:cds;Parent=MsG0280010367.01.T01
Chr2 CDS 68612909 68613088 68612909 ID=MsG0280010367.01.T01:cds;Parent=MsG0280010367.01.T01
Chr2 CDS 68613404 68613468 68613404 ID=MsG0280010367.01.T01:cds;Parent=MsG0280010367.01.T01
Chr2 CDS 68614648 68614755 68614648 ID=MsG0280010367.01.T01:cds;Parent=MsG0280010367.01.T01
Chr2 CDS 68615092 68615219 68615092 ID=MsG0280010367.01.T01:cds;Parent=MsG0280010367.01.T01
Chr2 CDS 68615311 68615389 68615311 ID=MsG0280010367.01.T01:cds;Parent=MsG0280010367.01.T01
Chr2 CDS 68615908 68616072 68615908 ID=MsG0280010367.01.T01:cds;Parent=MsG0280010367.01.T01
Chr2 three_prime_UTR 68616073 68616204 68616073 ID=MsG0280010367.01.T01:three_prime_utr;Parent=MsG0280010367.01.T01
Gene Sequence

>MsG0280010367.01.T01

ATGAGGTTGAGAAGACGAAGAGACATCATAACCCAGAAGATTGATAAGTCGATGAGAAGTCACTACAATGATGAATTGTCTGAAGCGGTCTTTCATCAGATTTCCTCTATTTTCTACGGTGGCGAGTCAGTCAAGAGACCTGATACCGAGAAAGTTGATGCTGCAAATGAGTTTGAAAGAATACTGAATGTATCACAGTTGCCAAACGTACCTCAGAGAACTGAGGCTACCCTTGAGTTGTTTGATAAAGTGGGACGAAAACCAGGCGTGAAAGGATACAATGCATTGGTAGAAATTTGCATGGGTAAAGCTAGGGAAGCTGAGAATGAAGACATTGCAATTGAAGAAATATGGGGAAGCTCATTATTAAAAGTCTTAATGCCAAACATGCATGTTTCAAAATTGGTGCATCCACTGTCTGAAAATTATTTATTGGCTCTTGTGAGAGGTGAACGGAAGGAGAATATTTTGGAGGTGTTGGAAATCATGGACATAAAAAAGCTTTCATCTGTTGGCTCTATAGCGAAGGTATTTCAGGCATTGGGAAGACTACTATTGGAACCTGTTGCAGAGGAGCTCCTTTTAGACTTCAAAGCAAGTGATTATGATGAAGATAATATTACAACCTTCATTGCTAGTTACACAGTCAGCATTCCAGATTTATCGGTTGAGGGAGGCATAAATAAATTCAAGGATTTGCATGAAAAACTAGAAGTTTTACCTTCTTCCTCGTCATATGAGAAGCTCATTTCACGTAACTGTGCATTGCTCAAGGAGCACACTTGTTCCGATGGAGAGTTCGATCAATTGCTTCTGCTACTTGAGGAACTAAATGATACATCCTATTGGAATGATGCTTGCTGCAGAATCATCTTGTGTTGTATTTGGAATAAGCGTTTAAGTTCTGCTATTGATTTGTGTAAGCTTCTCAAGGATAAGTTACAAATTGATGAACTGGTTATGAATGTTCTCTTTGATAAGGTATTTTCTCGAATTGAAGAGTCAGAAACCAATCATCGGCAAACTTGCATGGAGTTGTTTTTAGAAATGAAGGATAAGCTTGGTCTTTGGCCTTCACAAAAATGTTACGATTCTCTGTTCGTTCCTTCTGCAAATGCCAATGATAATTCACATAATGCTGAATGA
Protein sequence

>MsG0280010367.01.T01

MRLRRRRDIITQKIDKSMRSHYNDELSEAVFHQISSIFYGGESVKRPDTEKVDAANEFERILNVSQLPNVPQRTEATLELFDKVGRKPGVKGYNALVEICMGKAREAENEDIAIEEIWGSSLLKVLMPNMHVSKLVHPLSENYLLALVRGERKENILEVLEIMDIKKLSSVGSIAKVFQALGRLLLEPVAEELLLDFKASDYDEDNITTFIASYTVSIPDLSVEGGINKFKDLHEKLEVLPSSSSYEKLISRNCALLKEHTCSDGEFDQLLLLLEELNDTSYWNDACCRIILCCIWNKRLSSAIDLCKLLKDKLQIDELVMNVLFDKVFSRIEESETNHRQTCMELFLEMKDKLGLWPSQKCYDSLFVPSANANDNSHNAE*