AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280010592.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010592.01.T01 MTR_2g088130 88.509 409 13 1 1 409 1 375 0.0 726
MsG0280010592.01.T01 MTR_2g088130 87.088 364 13 1 1 364 1 330 0.0 630
MsG0280010592.01.T01 MTR_2g088130 99.273 275 2 0 135 409 51 325 0.0 560
MsG0280010592.01.T01 MTR_4g132250 67.987 303 97 0 107 409 91 393 1.15e-151 435
MsG0280010592.01.T01 MTR_2g084875 65.132 304 104 1 107 408 118 421 6.58e-140 406
MsG0280010592.01.T01 MTR_4g055310 63.487 304 109 1 107 408 105 408 1.97e-135 394
MsG0280010592.01.T01 MTR_4g061070 61.921 302 112 1 107 408 75 373 5.07e-128 374
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010592.01.T01 AT1G11790 67.667 300 97 0 107 406 90 389 6.34e-151 433
MsG0280010592.01.T01 AT1G08250 64.570 302 105 1 107 406 100 401 7.63e-138 400
MsG0280010592.01.T01 AT2G27820 63.158 304 110 1 107 408 105 408 4.39e-135 394
MsG0280010592.01.T01 AT3G07630 60.577 312 118 1 98 409 74 380 4.13e-127 372
MsG0280010592.01.T01 AT3G07630 60.577 312 118 1 98 409 74 380 4.13e-127 372
MsG0280010592.01.T01 AT3G07630 60.577 312 118 1 98 409 74 380 4.13e-127 372
MsG0280010592.01.T01 AT3G44720 59.150 306 121 2 107 408 109 414 7.52e-125 368
MsG0280010592.01.T01 AT5G22630 58.900 309 123 2 104 408 107 415 4.49e-121 358
MsG0280010592.01.T01 AT1G11790 63.598 239 87 0 107 345 90 328 2.31e-108 323

Find 113 sgRNAs with CRISPR-Local

Find 354 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATGAGATTGTTTCACAATT+AGG 0.168545 2:+71913424 None:intergenic
TACATTAAGCCCATAGATTT+TGG 0.191666 2:+71912348 None:intergenic
TTTCACCTTAAAAGGCTTAT+TGG 0.192883 2:+71911080 None:intergenic
AATGACTTAAAACACATTTA+AGG 0.207650 2:+71913083 None:intergenic
CGGGGTGCTGTTCAAGGTTT+TGG 0.208293 2:-71910946 MsG0280010592.01.T01:CDS
TTATTGGATCTTGGAATTAT+TGG 0.221864 2:+71911096 None:intergenic
GATACTTTCCTGAATAAATT+AGG 0.237511 2:-71912562 MsG0280010592.01.T01:CDS
TGCTAACACCTAATTTATTC+AGG 0.253669 2:+71912554 None:intergenic
ATTCGAGCTGCCAAAATCTA+TGG 0.255519 2:-71912358 MsG0280010592.01.T01:CDS
TGCTTTGGTGGCCTAGCCCT+TGG 0.270408 2:+71910083 None:intergenic
ATGAGATTGTTTCACAATTA+GGG 0.284913 2:+71913425 None:intergenic
TTAAAAGGCTTATTGGATCT+TGG 0.305150 2:+71911087 None:intergenic
GAATATAACTATCGTCTATA+TGG 0.309232 2:+71910315 None:intergenic
ATTGAGTCTTGAAAAGGATT+TGG 0.316187 2:-71910259 MsG0280010592.01.T01:three_prime_UTR
TGGTCTAAGAATATCTTTAC+AGG 0.320390 2:+71910034 None:intergenic
TCATGGATTGCATAAAGATT+TGG 0.322443 2:-71914999 MsG0280010592.01.T01:CDS
CGTCTATATGGTTGTATCAA+TGG 0.334217 2:+71910327 None:intergenic
TTCTAAAGCGGTTTGTGCTC+GGG 0.351032 2:+71910516 None:intergenic
GATTTATGCCTCCAATAAAA+AGG 0.352909 2:-71910057 MsG0280010592.01.T01:three_prime_UTR
ATGATTTACTTCTTCGTCAT+AGG 0.356110 2:-71913180 MsG0280010592.01.T01:CDS
GTGGTTTAGCCAGGCTCTAC+TGG 0.371504 2:+71909924 None:intergenic
CGTCATAGGCTTCACATTGT+TGG 0.374885 2:-71913166 MsG0280010592.01.T01:CDS
AGTTTCACGACTTTGAATAC+TGG 0.381338 2:-71913832 MsG0280010592.01.T01:CDS
CAAAGTACGAATATCATATC+AGG 0.382928 2:-71913577 MsG0280010592.01.T01:intron
GCATAAATCCCTTGCTTTGG+TGG 0.383312 2:+71910071 None:intergenic
GAAAACTTTGTTCAGAGTTA+TGG 0.392924 2:-71913810 MsG0280010592.01.T01:CDS
GTCTATATGGTTGTATCAAT+GGG 0.396066 2:+71910328 None:intergenic
CTTAGTGGCCGATTTCTTTG+TGG 0.398476 2:+71910790 None:intergenic
GCAATATCAGATATGGATAA+TGG 0.399851 2:+71913621 None:intergenic
AGCAGCCGCAATATCAGATA+TGG 0.406153 2:+71913614 None:intergenic
AAGGATACATAAGAACTTGC+AGG 0.413275 2:-71910112 MsG0280010592.01.T01:three_prime_UTR
TTAGTGGCCGATTTCTTTGT+GGG 0.416731 2:+71910791 None:intergenic
GAGGCATAAATCCCTTGCTT+TGG 0.417525 2:+71910068 None:intergenic
TCAGTTGTTGTGGTTTAGCC+AGG 0.424952 2:+71909915 None:intergenic
GTCGTTGACGACTCCAACAC+TGG 0.427647 2:-71910766 MsG0280010592.01.T01:CDS
CCTCAAAATCAATATAGAAT+AGG 0.430039 2:+71910554 None:intergenic
CTGATATGATATTCGTACTT+TGG 0.430254 2:+71913578 None:intergenic
CTCTCCCTCCTAGCTATGCC+TGG 0.432761 2:-71913121 MsG0280010592.01.T01:CDS
CTATACGACAACTCAGTACT+TGG 0.435904 2:+71910014 None:intergenic
GCAACATTTCTTCGAGTGCT+TGG 0.436676 2:-71910358 MsG0280010592.01.T01:CDS
GCTTTGGTGGCCTAGCCCTT+GGG 0.438411 2:+71910084 None:intergenic
GTTCTAAAGCGGTTTGTGCT+CGG 0.443727 2:+71910515 None:intergenic
GAGTCGTCAACGACTCTTAG+TGG 0.444824 2:+71910775 None:intergenic
ATGGCATCTCTTGTTGTACC+AGG 0.445664 2:-71915172 MsG0280010592.01.T01:CDS
AGGTCCCGGGGTGCTGTTCA+AGG 0.449796 2:-71910952 MsG0280010592.01.T01:CDS
AAAGTCGCCCACAAAGAAAT+CGG 0.456741 2:-71910798 MsG0280010592.01.T01:CDS
TCAAATGGTCTGTATGATAC+TGG 0.458871 2:-71912394 MsG0280010592.01.T01:CDS
ATTCCAATTGAAAATACATC+TGG 0.458943 2:-71913223 MsG0280010592.01.T01:CDS
TAACTGGATCCATCTCATAA+AGG 0.459297 2:-71910131 MsG0280010592.01.T01:three_prime_UTR
TCAAGCATTGAGTCTTGAAA+AGG 0.461389 2:-71910265 MsG0280010592.01.T01:three_prime_UTR
ACAGGCTGTTGAGTTGTGGC+TGG 0.462106 2:-71913260 MsG0280010592.01.T01:intron
CTTATGTATCCTTTATGAGA+TGG 0.468697 2:+71910122 None:intergenic
GTCGTTATCTTGTGCTTGCA+AGG 0.469043 2:-71911122 MsG0280010592.01.T01:CDS
GAAGAAGTAAATCATAGTTC+CGG 0.473021 2:+71913188 None:intergenic
GCAGGGCCGACCCAAGGGCT+AGG 0.474468 2:-71910094 MsG0280010592.01.T01:three_prime_UTR
TGATACAGCAGGTGCTGCTC+AGG 0.476534 2:-71912518 MsG0280010592.01.T01:intron
GACTAGATTGTAGCTTCAAA+TGG 0.479717 2:-71912409 MsG0280010592.01.T01:intron
CATTGTTGGCGAGGTGCAGT+TGG 0.503801 2:-71913152 MsG0280010592.01.T01:CDS
AACTTGCAGGGCCGACCCAA+GGG 0.510195 2:-71910099 MsG0280010592.01.T01:three_prime_UTR
CAGGCATAGCTAGGAGGGAG+AGG 0.512484 2:+71913122 None:intergenic
ATTGTGTTTACACTGAATGA+AGG 0.513002 2:-71910972 MsG0280010592.01.T01:CDS
AAAACCTTGAACAGCACCCC+GGG 0.513278 2:+71910948 None:intergenic
GGCAGCTCGAATGCTTGCAA+TGG 0.513890 2:+71912369 None:intergenic
GACCTTAATCTCCATGGCTA+TGG 0.523993 2:-71915191 None:intergenic
GCATCCTCGCTGTATGATCC+TGG 0.526215 2:+71913463 None:intergenic
GATGAAAATACCCACTTGGA+AGG 0.526380 2:+71914972 None:intergenic
AAGATATATATCAGTTGTTG+TGG 0.533617 2:+71909905 None:intergenic
TGTACTTGCAGAAGGAATCC+AGG 0.535619 2:-71912329 MsG0280010592.01.T01:intron
TCTAAAGCGGTTTGTGCTCG+GGG 0.535844 2:+71910517 None:intergenic
GAAAATGTTGATGATACAGC+AGG 0.537015 2:-71912529 MsG0280010592.01.T01:CDS
CATCTGGTGGAAGCATTCAC+CGG 0.538869 2:-71913207 MsG0280010592.01.T01:CDS
TTCTGACACCAGGCATAGCT+AGG 0.539323 2:+71913113 None:intergenic
TTTGGCGGTATTTGCAATGA+GGG 0.541837 2:-71910928 MsG0280010592.01.T01:CDS
GATATTACAAGAGTTTATGA+TGG 0.542436 2:-71909973 MsG0280010592.01.T01:three_prime_UTR
CAAAACCTTGAACAGCACCC+CGG 0.545412 2:+71910947 None:intergenic
CCAATTGAAAATACATCTGG+TGG 0.545574 2:-71913220 MsG0280010592.01.T01:CDS
GAACTTGCAGGGCCGACCCA+AGG 0.547222 2:-71910100 MsG0280010592.01.T01:three_prime_UTR
AATCAAAGTCAAGTGGGTAG+TGG 0.552304 2:-71915034 MsG0280010592.01.T01:CDS
TTTACACTGAATGAAGGTCC+CGG 0.557024 2:-71910966 MsG0280010592.01.T01:CDS
TTCGAGCTGCCAAAATCTAT+GGG 0.560483 2:-71912357 MsG0280010592.01.T01:CDS
AGTGGTGGTGATGTCTCTCA+TGG 0.560582 2:-71915016 MsG0280010592.01.T01:CDS
AACCGCTTTAGAACATCTGC+AGG 0.560617 2:-71910506 MsG0280010592.01.T01:intron
TCGTTATCTTGTGCTTGCAA+GGG 0.561749 2:-71911121 MsG0280010592.01.T01:CDS
TCACTTGGCAGTTCCAGTGT+TGG 0.564118 2:+71910753 None:intergenic
GACACCAGGCATAGCTAGGA+GGG 0.564157 2:+71913117 None:intergenic
TTACACTGAATGAAGGTCCC+GGG 0.564770 2:-71910965 MsG0280010592.01.T01:CDS
GGGCTTAATGTACTTGCAGA+AGG 0.566639 2:-71912337 MsG0280010592.01.T01:CDS
AGGGCTAGGCCACCAAAGCA+AGG 0.572570 2:-71910080 MsG0280010592.01.T01:three_prime_UTR
AGTTGAGAACTTGAGAGCCC+TGG 0.572583 2:+71915154 None:intergenic
TTACTGATTTAGGGGATACC+AGG 0.572631 2:-71913481 MsG0280010592.01.T01:intron
AACAAGAGATGCCATAGCCA+TGG 0.584871 2:+71915180 None:intergenic
ATGAAAATACCCACTTGGAA+GGG 0.588803 2:+71914973 None:intergenic
CAAAGTCAAGTGGGTAGTGG+TGG 0.589017 2:-71915031 MsG0280010592.01.T01:CDS
ATTATCCATATCTGATATTG+CGG 0.589599 2:-71913619 MsG0280010592.01.T01:CDS
TAGGCTTCACATTGTTGGCG+AGG 0.601015 2:-71913161 MsG0280010592.01.T01:CDS
TGATCACAATCAAAGTCAAG+TGG 0.602396 2:-71915041 MsG0280010592.01.T01:CDS
TGGTGGCCTAGCCCTTGGGT+CGG 0.603041 2:+71910088 None:intergenic
TGTGACAGGCTGTTGAGTTG+TGG 0.603950 2:-71913264 MsG0280010592.01.T01:intron
AGAAGATGAAAATACCCACT+TGG 0.610614 2:+71914968 None:intergenic
TGGCATCTCTTGTTGTACCA+GGG 0.611518 2:-71915171 MsG0280010592.01.T01:CDS
GGGCTAGGCCACCAAAGCAA+GGG 0.617762 2:-71910079 MsG0280010592.01.T01:three_prime_UTR
AGGATACATAAGAACTTGCA+GGG 0.620416 2:-71910111 MsG0280010592.01.T01:three_prime_UTR
TGACACCAGGCATAGCTAGG+AGG 0.623817 2:+71913116 None:intergenic
GATCACAATCAAAGTCAAGT+GGG 0.633860 2:-71915040 MsG0280010592.01.T01:CDS
CACCTGCAGATGTTCTAAAG+CGG 0.635791 2:+71910504 None:intergenic
ATTTGGTCTCCCTTCCAAGT+GGG 0.637623 2:-71914982 MsG0280010592.01.T01:intron
AAGAGTTTATGATGGTACAG+TGG 0.646714 2:-71909965 MsG0280010592.01.T01:three_prime_UTR
TTCTAACAGAAAACCCACCA+AGG 0.657400 2:+71915089 None:intergenic
TACACTGAATGAAGGTCCCG+GGG 0.664315 2:-71910964 MsG0280010592.01.T01:CDS
GAGGGACATAAATTTAACCA+AGG 0.667146 2:-71910910 MsG0280010592.01.T01:intron
GATTTGGTCTCCCTTCCAAG+TGG 0.672199 2:-71914983 MsG0280010592.01.T01:CDS
AGCAAAGATAATGATGCATG+TGG 0.698803 2:-71915065 MsG0280010592.01.T01:CDS
GATACCAGGATCATACAGCG+AGG 0.785382 2:-71913467 MsG0280010592.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CAATAAACATAAATAAAATA+AGG + Chr2:71911742-71911761 None:intergenic 10.0%
!!! ACAAGTATTTATATTTTATA+TGG - Chr2:71912351-71912370 MsG0280010592.01.T01:CDS 10.0%
!!! ATAGTTATATTCTTTTTTAT+TGG - Chr2:71914771-71914790 MsG0280010592.01.T01:intron 10.0%
!!! CTTATTTTATTTATGTTTAT+TGG - Chr2:71911740-71911759 MsG0280010592.01.T01:intron 10.0%
!! AAAATGAAATTAGTATAAGA+TGG + Chr2:71911202-71911221 None:intergenic 15.0%
!! TGAAAAATTATAGAAAATGA+GGG + Chr2:71913299-71913318 None:intergenic 15.0%
!! TGAAATATTGAATAGTATAT+TGG - Chr2:71913855-71913874 MsG0280010592.01.T01:intron 15.0%
!! TTGAAAAATTATAGAAAATG+AGG + Chr2:71913300-71913319 None:intergenic 15.0%
!!! ACAATTTTTCAAAACAAAAA+AGG + Chr2:71911794-71911813 None:intergenic 15.0%
!!! ATCTTATACTAATTTCATTT+TGG - Chr2:71911201-71911220 MsG0280010592.01.T01:intron 15.0%
!!! CAAATAAATGACAATTTTTA+AGG + Chr2:71914921-71914940 None:intergenic 15.0%
!!! TCAAATAAAATGTTTTGTTT+TGG - Chr2:71912878-71912897 MsG0280010592.01.T01:intron 15.0%
!!! TTTAAAGAGTAAATTTTTAG+AGG + Chr2:71910916-71910935 None:intergenic 15.0%
!!! TTTTTTTTTTTTTTTTGTGG+TGG - Chr2:71913618-71913637 MsG0280010592.01.T01:CDS 15.0%
!! AAAAAGGCAAAAAAACAAAA+AGG + Chr2:71910314-71910333 None:intergenic 20.0%
!! AAAAATTTCCCAAATAATCT+TGG + Chr2:71913109-71913128 None:intergenic 20.0%
!! AATGACTTAAAACACATTTA+AGG + Chr2:71911995-71912014 None:intergenic 20.0%
!! ACACTAAAGTTAAAAATCAA+GGG - Chr2:71913144-71913163 MsG0280010592.01.T01:CDS 20.0%
!! ATATAAAATGCAAATGCATA+AGG + Chr2:71911375-71911394 None:intergenic 20.0%
!! ATATCTATTTGACTATATAG+TGG - Chr2:71910232-71910251 MsG0280010592.01.T01:three_prime_UTR 20.0%
!! ATCAAATTTCGACATTAATT+TGG + Chr2:71910537-71910556 None:intergenic 20.0%
!! ATGCATAATAATATATGCAA+GGG + Chr2:71913668-71913687 None:intergenic 20.0%
!! CAAAAGATAATGAAATAAGA+TGG + Chr2:71911351-71911370 None:intergenic 20.0%
!! CAACTAGTTAAAACAATAAT+GGG - Chr2:71912305-71912324 MsG0280010592.01.T01:intron 20.0%
!! CAATGTGATTTAATATGAAA+AGG + Chr2:71914360-71914379 None:intergenic 20.0%
!! CTTAAAAATCACATTATACA+TGG + Chr2:71912587-71912606 None:intergenic 20.0%
!! GTAATCATTTAGAAAGTTAT+AGG - Chr2:71911309-71911328 MsG0280010592.01.T01:intron 20.0%
!! TATGCATAATAATATATGCA+AGG + Chr2:71913669-71913688 None:intergenic 20.0%
!! TCAACTAGTTAAAACAATAA+TGG - Chr2:71912304-71912323 MsG0280010592.01.T01:intron 20.0%
!! TCTGAAAAATAATGAATGAT+TGG + Chr2:71914078-71914097 None:intergenic 20.0%
!! TGTTCTATAAGTTTAAAGAA+AGG + Chr2:71913475-71913494 None:intergenic 20.0%
!!! ATAAGAGTATATTTGTTCAT+CGG + Chr2:71913813-71913832 None:intergenic 20.0%
!!! ATTAAAAGACGATTTTAATG+GGG - Chr2:71914232-71914251 MsG0280010592.01.T01:intron 20.0%
!!! ATTATCACAAACTTTTAACA+AGG + Chr2:71910198-71910217 None:intergenic 20.0%
!!! ATTCTACTTTTTGCTAATAT+AGG - Chr2:71911127-71911146 MsG0280010592.01.T01:CDS 20.0%
!!! ATTTGTTGATAAAGTATCAA+TGG - Chr2:71911038-71911057 MsG0280010592.01.T01:intron 20.0%
!!! ATTTTATGATTGGAATTCAA+GGG - Chr2:71914610-71914629 MsG0280010592.01.T01:intron 20.0%
!!! ATTTTGAAAACAAGCTAAAA+AGG + Chr2:71910330-71910349 None:intergenic 20.0%
!!! CAACAAATACTATTTTCTTT+AGG + Chr2:71911026-71911045 None:intergenic 20.0%
!!! CTTACTTGTTATTTTATGAT+TGG - Chr2:71914600-71914619 MsG0280010592.01.T01:intron 20.0%
!!! CTTTGAAAAATGAAAATGAT+TGG + Chr2:71912783-71912802 None:intergenic 20.0%
!!! GATAGTATTGAAAAATCAAA+AGG - Chr2:71911088-71911107 MsG0280010592.01.T01:CDS 20.0%
!!! GATTAAAAGACGATTTTAAT+GGG - Chr2:71914231-71914250 MsG0280010592.01.T01:intron 20.0%
!!! GATTTAGTTTATTCCATTTT+TGG - Chr2:71910254-71910273 MsG0280010592.01.T01:three_prime_UTR 20.0%
!!! TATTTTATATGGTTTAAGCA+TGG - Chr2:71912362-71912381 MsG0280010592.01.T01:CDS 20.0%
!!! TATTTTATGATTGGAATTCA+AGG - Chr2:71914609-71914628 MsG0280010592.01.T01:intron 20.0%
!!! TCTTTTGTTTATAATTCACT+TGG - Chr2:71910133-71910152 MsG0280010592.01.T01:three_prime_UTR 20.0%
!!! TGATTAAAAGACGATTTTAA+TGG - Chr2:71914230-71914249 MsG0280010592.01.T01:intron 20.0%
!!! TGGTTCAAGATTATTATTTT+AGG - Chr2:71910153-71910172 MsG0280010592.01.T01:three_prime_UTR 20.0%
!!! TGTCATTTATTTGTTTTAAC+TGG - Chr2:71914928-71914947 MsG0280010592.01.T01:intron 20.0%
!!! TTCAAGATTATTATTTTAGG+AGG - Chr2:71910156-71910175 MsG0280010592.01.T01:three_prime_UTR 20.0%
!!! TTGATTTTTCAATACTATCT+GGG + Chr2:71911087-71911106 None:intergenic 20.0%
!!! TTTGATTTTTCAATACTATC+TGG + Chr2:71911088-71911107 None:intergenic 20.0%
!!! TTTGTTGATAAAGTATCAAT+GGG - Chr2:71911039-71911058 MsG0280010592.01.T01:intron 20.0%
!!! TTTTTAGCTTGTTTTCAAAA+TGG - Chr2:71910329-71910348 MsG0280010592.01.T01:exon 20.0%
! AAAATGAAAATGATTGGTAG+CGG + Chr2:71912777-71912796 None:intergenic 25.0%
! AACAAAAAAGGTTATTGAGT+TGG + Chr2:71911782-71911801 None:intergenic 25.0%
! AAGATATATATCAGTTGTTG+TGG + Chr2:71915173-71915192 None:intergenic 25.0%
! ACAACTCGATAATTAATCAA+TGG + Chr2:71910467-71910486 None:intergenic 25.0%
! ACATAAATTTAACCAAGGTA+TGG - Chr2:71914170-71914189 MsG0280010592.01.T01:intron 25.0%
! AGGAAAAAATATAACTCACT+TGG + Chr2:71914340-71914359 None:intergenic 25.0%
! ATAATAATATATGCAAGGGT+CGG + Chr2:71913664-71913683 None:intergenic 25.0%
! ATCATTTCTCTAATTGAAGT+TGG - Chr2:71910575-71910594 MsG0280010592.01.T01:intron 25.0%
! ATCGGTAAATAATTGTTCAT+CGG + Chr2:71913795-71913814 None:intergenic 25.0%
! ATGAGATTGTTTCACAATTA+GGG + Chr2:71911653-71911672 None:intergenic 25.0%
! ATGTAATGCATCTATATTAC+AGG - Chr2:71913912-71913931 MsG0280010592.01.T01:intron 25.0%
! ATTATCCATATCTGATATTG+CGG - Chr2:71911456-71911475 MsG0280010592.01.T01:intron 25.0%
! ATTATGATAGAATAGAGTCA+AGG + Chr2:71914033-71914052 None:intergenic 25.0%
! ATTCCAATTGAAAATACATC+TGG - Chr2:71911852-71911871 MsG0280010592.01.T01:intron 25.0%
! CCTCAAAATCAATATAGAAT+AGG + Chr2:71914524-71914543 None:intergenic 25.0%
! GAAAATTAAGGGTTAGATAA+CGG + Chr2:71913746-71913765 None:intergenic 25.0%
! GAATATAACTATCGTCTATA+TGG + Chr2:71914763-71914782 None:intergenic 25.0%
! GACACTAAAGTTAAAAATCA+AGG - Chr2:71913143-71913162 MsG0280010592.01.T01:CDS 25.0%
! GATACTTTCCTGAATAAATT+AGG - Chr2:71912513-71912532 MsG0280010592.01.T01:intron 25.0%
! GATATTACAAGAGTTTATGA+TGG - Chr2:71915102-71915121 MsG0280010592.01.T01:CDS 25.0%
! GATGAACAAATATACTCTTA+TGG - Chr2:71913812-71913831 MsG0280010592.01.T01:CDS 25.0%
! GTATTGAAAAATCAAAAGGA+GGG - Chr2:71911092-71911111 MsG0280010592.01.T01:CDS 25.0%
! GTTGAAAATATAAGGGAAAA+TGG + Chr2:71910957-71910976 None:intergenic 25.0%
! TCAAAAATTGTATTGGAGAA+GGG - Chr2:71910784-71910803 MsG0280010592.01.T01:CDS 25.0%
! TCATTTCTCTAATTGAAGTT+GGG - Chr2:71910576-71910595 MsG0280010592.01.T01:intron 25.0%
! TGAATATGTATTAGTCACAT+TGG - Chr2:71912441-71912460 MsG0280010592.01.T01:intron 25.0%
! TGAGAATCAAGCATTTAATT+TGG + Chr2:71912126-71912145 None:intergenic 25.0%
! TTATGATAGAATAGAGTCAA+GGG + Chr2:71914032-71914051 None:intergenic 25.0%
! TTATTGGATCTTGGAATTAT+TGG + Chr2:71913982-71914001 None:intergenic 25.0%
!! AAGAGATTAATTTTTGCTCT+GGG - Chr2:71913079-71913098 MsG0280010592.01.T01:CDS 25.0%
!! AGTATTGAAAAATCAAAAGG+AGG - Chr2:71911091-71911110 MsG0280010592.01.T01:CDS 25.0%
!! CCATTTTAGACAATCAAAAA+AGG + Chr2:71913275-71913294 None:intergenic 25.0%
!! TCAAGATTAAACTGTTTTGT+TGG - Chr2:71913520-71913539 MsG0280010592.01.T01:intron 25.0%
!!! ATACTAGTTCTTGAATTTTG+TGG - Chr2:71910405-71910424 MsG0280010592.01.T01:intron 25.0%
!!! ATGTTTGGATTACTGATTTA+GGG - Chr2:71911585-71911604 MsG0280010592.01.T01:intron 25.0%
!!! CAACAACTGTTTTTTTTGTA+GGG - Chr2:71911431-71911450 MsG0280010592.01.T01:intron 25.0%
!!! CCTATTCTATATTGATTTTG+AGG - Chr2:71914521-71914540 MsG0280010592.01.T01:intron 25.0%
!!! CCTTTTTTGATTGTCTAAAA+TGG - Chr2:71913272-71913291 MsG0280010592.01.T01:intron 25.0%
!!! CTCTCGATTTGAATAATTTT+TGG - Chr2:71911170-71911189 MsG0280010592.01.T01:intron 25.0%
!!! TATGTTTGGATTACTGATTT+AGG - Chr2:71911584-71911603 MsG0280010592.01.T01:intron 25.0%
!!! TGATTTTTCAATACTATCTG+GGG + Chr2:71911086-71911105 None:intergenic 25.0%
!!! TTGTTTTGAAAAATTGTGAC+AGG - Chr2:71911797-71911816 MsG0280010592.01.T01:intron 25.0%
AAACCATTATATGTCCTTAC+AGG - Chr2:71914689-71914708 MsG0280010592.01.T01:intron 30.0%
AAATGTTGCAAATTCCTGTA+AGG + Chr2:71914706-71914725 None:intergenic 30.0%
AAGAAATAGATGACATTGAG+AGG - Chr2:71910703-71910722 MsG0280010592.01.T01:intron 30.0%
AAGTCAGATAAACTAAGCAA+TGG - Chr2:71912843-71912862 MsG0280010592.01.T01:intron 30.0%
AATACAAACTTCTCCTCATT+TGG - Chr2:71910756-71910775 MsG0280010592.01.T01:intron 30.0%
AATCATCAATTAATGCCAGA+AGG + Chr2:71914456-71914475 None:intergenic 30.0%
AATGGGCATCATATAACAAT+AGG - Chr2:71912322-71912341 MsG0280010592.01.T01:intron 30.0%
ACAAATCAAGCAACCAAAAA+TGG + Chr2:71910270-71910289 None:intergenic 30.0%
AGAAATAGATGACATTGAGA+GGG - Chr2:71910704-71910723 MsG0280010592.01.T01:intron 30.0%
ATACAAACTTCTCCTCATTT+GGG - Chr2:71910757-71910776 MsG0280010592.01.T01:CDS 30.0%
ATCTAATCCTATCCAACATA+AGG - Chr2:71912098-71912117 MsG0280010592.01.T01:intron 30.0%
ATGATTTACTTCTTCGTCAT+AGG - Chr2:71911895-71911914 MsG0280010592.01.T01:intron 30.0%
ATGCAACAACAATAAGTTTC+TGG + Chr2:71912080-71912099 None:intergenic 30.0%
ATTCCTGTAAGGACATATAA+TGG + Chr2:71914695-71914714 None:intergenic 30.0%
ATTGAGTCTTGAAAAGGATT+TGG - Chr2:71914816-71914835 MsG0280010592.01.T01:intron 30.0%
ATTGTGTTTACACTGAATGA+AGG - Chr2:71914103-71914122 MsG0280010592.01.T01:intron 30.0%
CAAAGTACGAATATCATATC+AGG - Chr2:71911498-71911517 MsG0280010592.01.T01:intron 30.0%
CAAATATACTCTTATGGCTA+TGG - Chr2:71913818-71913837 MsG0280010592.01.T01:CDS 30.0%
CATGAGATTGTTTCACAATT+AGG + Chr2:71911654-71911673 None:intergenic 30.0%
CTCAAAAATTGTATTGGAGA+AGG - Chr2:71910783-71910802 MsG0280010592.01.T01:CDS 30.0%
CTGATATGATATTCGTACTT+TGG + Chr2:71911500-71911519 None:intergenic 30.0%
CTTATAGAACATTCTTACTG+AGG - Chr2:71913484-71913503 MsG0280010592.01.T01:intron 30.0%
CTTATGTATCCTTTATGAGA+TGG + Chr2:71914956-71914975 None:intergenic 30.0%
CTTCTCGAATATATAGTTGT+TGG - Chr2:71913189-71913208 MsG0280010592.01.T01:CDS 30.0%
GAAAACTTTGTTCAGAGTTA+TGG - Chr2:71911265-71911284 MsG0280010592.01.T01:intron 30.0%
GAAGAAGTAAATCATAGTTC+CGG + Chr2:71911890-71911909 None:intergenic 30.0%
GATTTATGCCTCCAATAAAA+AGG - Chr2:71915018-71915037 MsG0280010592.01.T01:CDS 30.0%
GCAATATCAGATATGGATAA+TGG + Chr2:71911457-71911476 None:intergenic 30.0%
GCAGCAAATAAAGAAAAACT+AGG + Chr2:71914391-71914410 None:intergenic 30.0%
GTAAAAAAGAAGCTTTCACA+TGG - Chr2:71914859-71914878 MsG0280010592.01.T01:intron 30.0%
GTCTATATGGTTGTATCAAT+GGG + Chr2:71914750-71914769 None:intergenic 30.0%
GTCTTCATGTTTCTCATTTA+AGG - Chr2:71912024-71912043 MsG0280010592.01.T01:intron 30.0%
GTCTTGGATAAACAACATTA+TGG + Chr2:71913447-71913466 None:intergenic 30.0%
GTGTTAAAACGTGTCTAATT+TGG - Chr2:71914412-71914431 MsG0280010592.01.T01:intron 30.0%
TAATAATATATGCAAGGGTC+GGG + Chr2:71913663-71913682 None:intergenic 30.0%
TAGGTAGCAAGGAAAATTAA+GGG + Chr2:71913757-71913776 None:intergenic 30.0%
TATCTGACTTCAAATGAAGA+GGG + Chr2:71912833-71912852 None:intergenic 30.0%
TGCTAACACCTAATTTATTC+AGG + Chr2:71912524-71912543 None:intergenic 30.0%
TGGTCTAAGAATATCTTTAC+AGG + Chr2:71915044-71915063 None:intergenic 30.0%
TTAAAAGGCTTATTGGATCT+TGG + Chr2:71913991-71914010 None:intergenic 30.0%
TTATCTGACTTCAAATGAAG+AGG + Chr2:71912834-71912853 None:intergenic 30.0%
TTGGAGGGTTGAAAATATAA+GGG + Chr2:71910964-71910983 None:intergenic 30.0%
TTTCACCTTAAAAGGCTTAT+TGG + Chr2:71913998-71914017 None:intergenic 30.0%
TTTGGAGGGTTGAAAATATA+AGG + Chr2:71910965-71910984 None:intergenic 30.0%
! AAAGGAGTTTTCACCTTAAA+AGG + Chr2:71914006-71914025 None:intergenic 30.0%
! AAGATCCAATAAGCCTTTTA+AGG - Chr2:71913990-71914009 MsG0280010592.01.T01:intron 30.0%
! ATCTGAAAAGAGCACAAAAA+TGG - Chr2:71909958-71909977 MsG0280010592.01.T01:three_prime_UTR 30.0%
! ATCTTTACAGGCCTTTTTAT+TGG + Chr2:71915032-71915051 None:intergenic 30.0%
! CAAGAGATTAATTTTTGCTC+TGG - Chr2:71913078-71913097 MsG0280010592.01.T01:CDS 30.0%
! TAAAGTATCAATGGGAGATT+TGG - Chr2:71911047-71911066 MsG0280010592.01.T01:intron 30.0%
! TACATTAAGCCCATAGATTT+TGG + Chr2:71912730-71912749 None:intergenic 30.0%
! TCATGGATTGCATAAAGATT+TGG - Chr2:71910076-71910095 MsG0280010592.01.T01:three_prime_UTR 30.0%
! TCTGAAAAGAGCACAAAAAT+GGG - Chr2:71909959-71909978 MsG0280010592.01.T01:three_prime_UTR 30.0%
!! ATGTGTTTTAAGTCATTCTC+AGG - Chr2:71911998-71912017 MsG0280010592.01.T01:intron 30.0%
!! CTGTTTTGTTGGATATAGAA+AGG - Chr2:71913531-71913550 MsG0280010592.01.T01:intron 30.0%
!! TGATTTTGAAGAGGCTTTTA+AGG - Chr2:71911677-71911696 MsG0280010592.01.T01:intron 30.0%
!! TGTTTGGATTACTGATTTAG+GGG - Chr2:71911586-71911605 MsG0280010592.01.T01:intron 30.0%
!! TTTAATTTGGTGCCTTATGT+TGG + Chr2:71912113-71912132 None:intergenic 30.0%
!! TTTAGGAGGAGTATTGTTTA+AGG - Chr2:71910170-71910189 MsG0280010592.01.T01:three_prime_UTR 30.0%
!!! GCAACAACTGTTTTTTTTGT+AGG - Chr2:71911430-71911449 MsG0280010592.01.T01:intron 30.0%
!!! TTTTTTTTTTTTGTGGTGGC+CGG - Chr2:71913622-71913641 MsG0280010592.01.T01:CDS 30.0%
AACTAGTATGTACTCAACCA+TGG + Chr2:71910394-71910413 None:intergenic 35.0%
AAGAGTTTATGATGGTACAG+TGG - Chr2:71915110-71915129 MsG0280010592.01.T01:CDS 35.0%
AAGGATACATAAGAACTTGC+AGG - Chr2:71914963-71914982 MsG0280010592.01.T01:intron 35.0%
AATTAATGCCAGAAGGATTG+AGG + Chr2:71914449-71914468 None:intergenic 35.0%
AGAAGATGAAAATACCCACT+TGG + Chr2:71910110-71910129 None:intergenic 35.0%
AGACAATCAAAAAAGGCAGT+AGG + Chr2:71913268-71913287 None:intergenic 35.0%
AGCAAAGATAATGATGCATG+TGG - Chr2:71910010-71910029 MsG0280010592.01.T01:three_prime_UTR 35.0%
AGGATACATAAGAACTTGCA+GGG - Chr2:71914964-71914983 MsG0280010592.01.T01:intron 35.0%
AGTTTCACGACTTTGAATAC+TGG - Chr2:71911243-71911262 MsG0280010592.01.T01:intron 35.0%
ATACACAGAAACATGTTGAC+TGG + Chr2:71913710-71913729 None:intergenic 35.0%
ATGAAAATACCCACTTGGAA+GGG + Chr2:71910105-71910124 None:intergenic 35.0%
ATGATTGGAATTCAAGGGAA+AGG - Chr2:71914615-71914634 MsG0280010592.01.T01:intron 35.0%
CAAACATATAATGACGAACG+TGG + Chr2:71911572-71911591 None:intergenic 35.0%
CACGTTCGTCATTATATGTT+TGG - Chr2:71911570-71911589 MsG0280010592.01.T01:intron 35.0%
CCAAGAACAAATCTCCTAAA+AGG - Chr2:71913325-71913344 MsG0280010592.01.T01:intron 35.0%
CCAATTGAAAATACATCTGG+TGG - Chr2:71911855-71911874 MsG0280010592.01.T01:intron 35.0%
CGTCTATATGGTTGTATCAA+TGG + Chr2:71914751-71914770 None:intergenic 35.0%
CTCAACAATGTAGTTGAAGT+TGG - Chr2:71913030-71913049 MsG0280010592.01.T01:intron 35.0%
CTCTTAAACTCGACTATATG+TGG + Chr2:71912397-71912416 None:intergenic 35.0%
GAAATAGATGACATTGAGAG+GGG - Chr2:71910705-71910724 MsG0280010592.01.T01:intron 35.0%
GACTAGATTGTAGCTTCAAA+TGG - Chr2:71912666-71912685 MsG0280010592.01.T01:intron 35.0%
GAGGGACATAAATTTAACCA+AGG - Chr2:71914165-71914184 MsG0280010592.01.T01:intron 35.0%
GATCACAATCAAAGTCAAGT+GGG - Chr2:71910035-71910054 MsG0280010592.01.T01:three_prime_UTR 35.0%
GGATATAGAAAGGTTTAACG+TGG - Chr2:71913541-71913560 MsG0280010592.01.T01:intron 35.0%
GGGGAACTCAAAAATTGTAT+TGG - Chr2:71910777-71910796 MsG0280010592.01.T01:CDS 35.0%
GTAGGTAGCAAGGAAAATTA+AGG + Chr2:71913758-71913777 None:intergenic 35.0%
GTCATTGTTCAATCTGTAAG+TGG - Chr2:71912192-71912211 MsG0280010592.01.T01:intron 35.0%
GTGGTTAACGACATTCAAAA+TGG - Chr2:71910424-71910443 MsG0280010592.01.T01:intron 35.0%
GTTAACGACATTCAAAATGG+TGG - Chr2:71910427-71910446 MsG0280010592.01.T01:intron 35.0%
GTTATGTGAACAGCATGAAA+GGG - Chr2:71913574-71913593 MsG0280010592.01.T01:intron 35.0%
GTTTCTGTGTATCTGTCAAT+TGG - Chr2:71913718-71913737 MsG0280010592.01.T01:intron 35.0%
TAACTGGATCCATCTCATAA+AGG - Chr2:71914944-71914963 MsG0280010592.01.T01:intron 35.0%
TACAAACTTCTCCTCATTTG+GGG - Chr2:71910758-71910777 MsG0280010592.01.T01:CDS 35.0%
TCAAATGGTCTGTATGATAC+TGG - Chr2:71912681-71912700 MsG0280010592.01.T01:intron 35.0%
TCGAATATATAGTTGTTGGC+TGG - Chr2:71913193-71913212 MsG0280010592.01.T01:CDS 35.0%
TCGGTAAAGAGCAAATTTGT+AGG + Chr2:71913776-71913795 None:intergenic 35.0%
TGATCACAATCAAAGTCAAG+TGG - Chr2:71910034-71910053 MsG0280010592.01.T01:three_prime_UTR 35.0%
TGATTGGAATTCAAGGGAAA+GGG - Chr2:71914616-71914635 MsG0280010592.01.T01:intron 35.0%
TGTTATGTGAACAGCATGAA+AGG - Chr2:71913573-71913592 MsG0280010592.01.T01:intron 35.0%
TTAAAGAAAGGACGATGTCT+TGG + Chr2:71913463-71913482 None:intergenic 35.0%
TTCAATCTGTAAGTGGTACT+GGG - Chr2:71912199-71912218 MsG0280010592.01.T01:intron 35.0%
! ACGAAACAGAATAGCCTTTT+AGG + Chr2:71913342-71913361 None:intergenic 35.0%
! ATTGTATTGGAGAAGGGTTT+TGG - Chr2:71910790-71910809 MsG0280010592.01.T01:CDS 35.0%
! CAAAGCATTAGTCTACTCTT+TGG + Chr2:71910623-71910642 None:intergenic 35.0%
! CCACCAGATGTATTTTCAAT+TGG + Chr2:71911858-71911877 None:intergenic 35.0%
! GGAAATACTTTTCCATACCT+TGG + Chr2:71914185-71914204 None:intergenic 35.0%
! TTTACAGGCCTTTTTATTGG+AGG + Chr2:71915029-71915048 None:intergenic 35.0%
!! AAAAATGGGTTTTCCTTGGT+GGG - Chr2:71909973-71909992 MsG0280010592.01.T01:three_prime_UTR 35.0%
!! CCTTTTAGGAGATTTGTTCT+TGG + Chr2:71913328-71913347 None:intergenic 35.0%
!! GAAAATGTTGATGATACAGC+AGG - Chr2:71912546-71912565 MsG0280010592.01.T01:CDS 35.0%
!! TAATGCTTTGTTTGCGAGTT+TGG - Chr2:71910633-71910652 MsG0280010592.01.T01:intron 35.0%
!! TCAAGCATTGAGTCTTGAAA+AGG - Chr2:71914810-71914829 MsG0280010592.01.T01:intron 35.0%
!!! ATTTTTGAGTTCCCCAAATG+AGG + Chr2:71910772-71910791 None:intergenic 35.0%
!!! TGAATTTTAAAGTGTCACGC+TGG - Chr2:71912242-71912261 MsG0280010592.01.T01:intron 35.0%
!!! TTTTTTTTTTTGTGGTGGCC+GGG - Chr2:71913623-71913642 MsG0280010592.01.T01:CDS 35.0%
AAAGTCGCCCACAAAGAAAT+CGG - Chr2:71914277-71914296 MsG0280010592.01.T01:intron 40.0%
AAGTGCTCTGATGTAAGTGA+TGG - Chr2:71912903-71912922 MsG0280010592.01.T01:intron 40.0%
AATCAAAGTCAAGTGGGTAG+TGG - Chr2:71910041-71910060 MsG0280010592.01.T01:three_prime_UTR 40.0%
AATCACGCTTCTAGATTCTC+TGG - Chr2:71914050-71914069 MsG0280010592.01.T01:intron 40.0%
ATTCGAGCTGCCAAAATCTA+TGG - Chr2:71912717-71912736 MsG0280010592.01.T01:intron 40.0%
CAACTGAGCTAGACTAACAA+AGG + Chr2:71914206-71914225 None:intergenic 40.0%
CTAGTCTCGCATACACATTA+AGG + Chr2:71912652-71912671 None:intergenic 40.0%
CTATACGACAACTCAGTACT+TGG + Chr2:71915064-71915083 None:intergenic 40.0%
CTTCAAATGAAGAGGGTAAC+AGG + Chr2:71912826-71912845 None:intergenic 40.0%
CTTTGTCTGAGAGTTTGGAT+GGG + Chr2:71911003-71911022 None:intergenic 40.0%
GAAAAAAAGGAAGGAGCAAG+TGG - Chr2:71910680-71910699 MsG0280010592.01.T01:intron 40.0%
GAATAGAGTCAAGGGTCAAA+AGG + Chr2:71914024-71914043 None:intergenic 40.0%
GAGCAAATTTGTAGGTAGCA+AGG + Chr2:71913768-71913787 None:intergenic 40.0%
GATGAAAATACCCACTTGGA+AGG + Chr2:71910106-71910125 None:intergenic 40.0%
GGATAGTCAACACAGTTCAA+TGG + Chr2:71910516-71910535 None:intergenic 40.0%
GTTCAATCTGTAAGTGGTAC+TGG - Chr2:71912198-71912217 MsG0280010592.01.T01:intron 40.0%
TCGTTATCTTGTGCTTGCAA+GGG - Chr2:71913954-71913973 MsG0280010592.01.T01:intron 40.0%
TCTTACTGAGGCTATCTATC+TGG - Chr2:71913496-71913515 MsG0280010592.01.T01:intron 40.0%
TGTGACAATTTGCAAGACCA+TGG - Chr2:71910374-71910393 MsG0280010592.01.T01:intron 40.0%
TGTTTCGTCGAAGCTCAAAA+TGG - Chr2:71913354-71913373 MsG0280010592.01.T01:intron 40.0%
TTCGAGCTGCCAAAATCTAT+GGG - Chr2:71912718-71912737 MsG0280010592.01.T01:intron 40.0%
TTCTAACAGAAAACCCACCA+AGG + Chr2:71909989-71910008 None:intergenic 40.0%
TTTACACTGAATGAAGGTCC+CGG - Chr2:71914109-71914128 MsG0280010592.01.T01:intron 40.0%
TTTGGCGGTATTTGCAATGA+GGG - Chr2:71914147-71914166 MsG0280010592.01.T01:intron 40.0%
! AGAAATTCTTTAGTTCCCCC+GGG - Chr2:71912982-71913001 MsG0280010592.01.T01:intron 40.0%
! ATAGAGATTTTTCATGCCCC+GGG + Chr2:71913002-71913021 None:intergenic 40.0%
! CAGAAATTCTTTAGTTCCCC+CGG - Chr2:71912981-71913000 MsG0280010592.01.T01:intron 40.0%
! CATAGAGATTTTTCATGCCC+CGG + Chr2:71913003-71913022 None:intergenic 40.0%
! CATTTTGTCCTCAATCCTTC+TGG - Chr2:71914438-71914457 MsG0280010592.01.T01:intron 40.0%
! TTAGGCTTTGTCTGAGAGTT+TGG + Chr2:71911008-71911027 None:intergenic 40.0%
! TTAGTGGCCGATTTCTTTGT+GGG + Chr2:71914287-71914306 None:intergenic 40.0%
! TTTTGGCGGTATTTGCAATG+AGG - Chr2:71914146-71914165 MsG0280010592.01.T01:intron 40.0%
!! CAAAAATGGGTTTTCCTTGG+TGG - Chr2:71909972-71909991 MsG0280010592.01.T01:three_prime_UTR 40.0%
!! CTCATGCAGTGATTTTGAAG+AGG - Chr2:71911668-71911687 MsG0280010592.01.T01:intron 40.0%
!! GCACAAAAATGGGTTTTCCT+TGG - Chr2:71909969-71909988 MsG0280010592.01.T01:three_prime_UTR 40.0%
!! TGATGTAAGTGATGGACTGA+TGG - Chr2:71912911-71912930 MsG0280010592.01.T01:intron 40.0%
!! TGGGAGCACCAAGATTATTT+GGG - Chr2:71913098-71913117 MsG0280010592.01.T01:CDS 40.0%
!! TTACTGATTTAGGGGATACC+AGG - Chr2:71911594-71911613 MsG0280010592.01.T01:intron 40.0%
!! TTTGGTGCCTTATGTTGGAT+AGG + Chr2:71912108-71912127 None:intergenic 40.0%
!!! CTCAATGCCTTTTTTCATGC+AGG - Chr2:71912476-71912495 MsG0280010592.01.T01:intron 40.0%
!!! TTTTTTTTTTGTGGTGGCCG+GGG - Chr2:71913624-71913643 MsG0280010592.01.T01:CDS 40.0%
ACATTGAGAGGGGAAGACTT+TGG - Chr2:71910715-71910734 MsG0280010592.01.T01:intron 45.0%
AGCAGCCGCAATATCAGATA+TGG + Chr2:71911464-71911483 None:intergenic 45.0%
ATTGAGAGGGGAAGACTTTG+GGG - Chr2:71910717-71910736 MsG0280010592.01.T01:intron 45.0%
ATTTGGTCTCCCTTCCAAGT+GGG - Chr2:71910093-71910112 MsG0280010592.01.T01:three_prime_UTR 45.0%
CATTGAGAGGGGAAGACTTT+GGG - Chr2:71910716-71910735 MsG0280010592.01.T01:intron 45.0%
CGGGGGAACTAAAGAATTTC+TGG + Chr2:71912983-71913002 None:intergenic 45.0%
CGGGGTTTGGAAAAAAAGGA+AGG - Chr2:71910671-71910690 MsG0280010592.01.T01:intron 45.0%
CGTCATAGGCTTCACATTGT+TGG - Chr2:71911909-71911928 MsG0280010592.01.T01:intron 45.0%
GAGGCATAAATCCCTTGCTT+TGG + Chr2:71915010-71915029 None:intergenic 45.0%
GCAACATTTCTTCGAGTGCT+TGG - Chr2:71914717-71914736 MsG0280010592.01.T01:intron 45.0%
GCAAGAGCCTGCATGAAAAA+AGG + Chr2:71912486-71912505 None:intergenic 45.0%
GCATAAATCCCTTGCTTTGG+TGG + Chr2:71915007-71915026 None:intergenic 45.0%
GCTTTGTCTGAGAGTTTGGA+TGG + Chr2:71911004-71911023 None:intergenic 45.0%
GGGCTTAATGTACTTGCAGA+AGG - Chr2:71912738-71912757 MsG0280010592.01.T01:intron 45.0%
GTCGTTATCTTGTGCTTGCA+AGG - Chr2:71913953-71913972 MsG0280010592.01.T01:intron 45.0%
TCAGTTGTTGTGGTTTAGCC+AGG + Chr2:71915163-71915182 None:intergenic 45.0%
TGTACTTGCAGAAGGAATCC+AGG - Chr2:71912746-71912765 MsG0280010592.01.T01:intron 45.0%
TTACACTGAATGAAGGTCCC+GGG - Chr2:71914110-71914129 MsG0280010592.01.T01:intron 45.0%
! AGGAACTCTTTTCTGACACC+AGG + Chr2:71911975-71911994 None:intergenic 45.0%
! ATGGCATCTCTTGTTGTACC+AGG - Chr2:71909903-71909922 MsG0280010592.01.T01:three_prime_UTR 45.0%
! CTTAGTGGCCGATTTCTTTG+TGG + Chr2:71914288-71914307 None:intergenic 45.0%
! CTTTGTTTGCGAGTTTGGAG+GGG - Chr2:71910638-71910657 MsG0280010592.01.T01:intron 45.0%
! GAAATTCTTTAGTTCCCCCG+GGG - Chr2:71912983-71913002 MsG0280010592.01.T01:intron 45.0%
! TAGAGATTTTTCATGCCCCG+GGG + Chr2:71913001-71913020 None:intergenic 45.0%
! TGGCATCTCTTGTTGTACCA+GGG - Chr2:71909904-71909923 MsG0280010592.01.T01:three_prime_UTR 45.0%
!! AACCGCTTTAGAACATCTGC+AGG - Chr2:71914569-71914588 MsG0280010592.01.T01:intron 45.0%
!! CACCTGCAGATGTTCTAAAG+CGG + Chr2:71914574-71914593 None:intergenic 45.0%
!! CTGGGAGCACCAAGATTATT+TGG - Chr2:71913097-71913116 MsG0280010592.01.T01:CDS 45.0%
!! GCTTTGTTTGCGAGTTTGGA+GGG - Chr2:71910637-71910656 MsG0280010592.01.T01:intron 45.0%
!! GTATTGGAGAAGGGTTTTGG+CGG - Chr2:71910793-71910812 MsG0280010592.01.T01:CDS 45.0%
!! GTTCTAAAGCGGTTTGTGCT+CGG + Chr2:71914563-71914582 None:intergenic 45.0%
!! TATTGGAGAAGGGTTTTGGC+GGG - Chr2:71910794-71910813 MsG0280010592.01.T01:CDS 45.0%
!! TGCTTTGTTTGCGAGTTTGG+AGG - Chr2:71910636-71910655 MsG0280010592.01.T01:intron 45.0%
!! TTCTAAAGCGGTTTGTGCTC+GGG + Chr2:71914562-71914581 None:intergenic 45.0%
!!! TGATTGGTAGCGGTTTTACC+TGG + Chr2:71912767-71912786 None:intergenic 45.0%
!!! TTTTTTTTTTTTTTTTTTTG+TGG - Chr2:71913615-71913634 MsG0280010592.01.T01:CDS 5.0%
AAAACCTTGAACAGCACCCC+GGG + Chr2:71914130-71914149 None:intergenic 50.0%
AGTTGAGAACTTGAGAGCCC+TGG + Chr2:71909924-71909943 None:intergenic 50.0%
ATATGCAAGGGTCGGGATTC+AGG + Chr2:71913656-71913675 None:intergenic 50.0%
CAAAACCTTGAACAGCACCC+CGG + Chr2:71914131-71914150 None:intergenic 50.0%
GAGTCGTCAACGACTCTTAG+TGG + Chr2:71914303-71914322 None:intergenic 50.0%
GATACCAGGATCATACAGCG+AGG - Chr2:71911608-71911627 MsG0280010592.01.T01:intron 50.0%
GTCTGAGAGTTTGGATGGGA+GGG + Chr2:71910999-71911018 None:intergenic 50.0%
TACACTGAATGAAGGTCCCG+GGG - Chr2:71914111-71914130 MsG0280010592.01.T01:intron 50.0%
TAGGCTTCACATTGTTGGCG+AGG - Chr2:71911914-71911933 MsG0280010592.01.T01:intron 50.0%
TCACTTGGCAGTTCCAGTGT+TGG + Chr2:71914325-71914344 None:intergenic 50.0%
TCTGAGAGTTTGGATGGGAG+GGG + Chr2:71910998-71911017 None:intergenic 50.0%
TGTCTGAGAGTTTGGATGGG+AGG + Chr2:71911000-71911019 None:intergenic 50.0%
TTCTGACACCAGGCATAGCT+AGG + Chr2:71911965-71911984 None:intergenic 50.0%
TTGAGAGGGGAAGACTTTGG+GGG - Chr2:71910718-71910737 MsG0280010592.01.T01:intron 50.0%
TTTGCGAGTTTGGAGGGGAA+GGG - Chr2:71910643-71910662 MsG0280010592.01.T01:intron 50.0%
! AGAGATTTTTCATGCCCCGG+GGG + Chr2:71913000-71913019 None:intergenic 50.0%
! AGTGGTGGTGATGTCTCTCA+TGG - Chr2:71910059-71910078 MsG0280010592.01.T01:three_prime_UTR 50.0%
! CAAAGTCAAGTGGGTAGTGG+TGG - Chr2:71910044-71910063 MsG0280010592.01.T01:three_prime_UTR 50.0%
! GATTTGGTCTCCCTTCCAAG+TGG - Chr2:71910092-71910111 MsG0280010592.01.T01:three_prime_UTR 50.0%
! GTTTTGCAACCAGTAGAGCC+TGG - Chr2:71915142-71915161 MsG0280010592.01.T01:CDS 50.0%
! TCTAAAGCGGTTTGTGCTCG+GGG + Chr2:71914561-71914580 None:intergenic 50.0%
! TGTGACAGGCTGTTGAGTTG+TGG - Chr2:71911811-71911830 MsG0280010592.01.T01:intron 50.0%
!! CATCTGGTGGAAGCATTCAC+CGG - Chr2:71911868-71911887 MsG0280010592.01.T01:intron 50.0%
!!! AGAAGGGTTTTGGCGGGTTT+TGG - Chr2:71910800-71910819 MsG0280010592.01.T01:CDS 50.0%
!!! GGTGCTGTTCAAGGTTTTGG+CGG - Chr2:71914132-71914151 MsG0280010592.01.T01:intron 50.0%
AGAGTTTGGATGGGAGGGGA+AGG + Chr2:71910994-71911013 None:intergenic 55.0%
CACACTGACACTGCAGCTGT+AGG + Chr2:71913237-71913256 None:intergenic 55.0%
CATTGTTGGCGAGGTGCAGT+TGG - Chr2:71911923-71911942 MsG0280010592.01.T01:intron 55.0%
GACACCAGGCATAGCTAGGA+GGG + Chr2:71911961-71911980 None:intergenic 55.0%
GAGTTTGGATGGGAGGGGAA+GGG + Chr2:71910993-71911012 None:intergenic 55.0%
GCATCCTCGCTGTATGATCC+TGG + Chr2:71911615-71911634 None:intergenic 55.0%
GGCAGCTCGAATGCTTGCAA+TGG + Chr2:71912709-71912728 None:intergenic 55.0%
GGGGCGGGGTTTGGAAAAAA+AGG - Chr2:71910667-71910686 MsG0280010592.01.T01:intron 55.0%
GTCGTTGACGACTCCAACAC+TGG - Chr2:71914309-71914328 MsG0280010592.01.T01:intron 55.0%
GTGGTTTAGCCAGGCTCTAC+TGG + Chr2:71915154-71915173 None:intergenic 55.0%
GTTTGCGAGTTTGGAGGGGA+AGG - Chr2:71910642-71910661 MsG0280010592.01.T01:intron 55.0%
TGACACCAGGCATAGCTAGG+AGG + Chr2:71911962-71911981 None:intergenic 55.0%
! ACAGGCTGTTGAGTTGTGGC+TGG - Chr2:71911815-71911834 MsG0280010592.01.T01:intron 55.0%
!! TGATACAGCAGGTGCTGCTC+AGG - Chr2:71912557-71912576 MsG0280010592.01.T01:CDS 55.0%
!!! CGGGGTGCTGTTCAAGGTTT+TGG - Chr2:71914129-71914148 MsG0280010592.01.T01:intron 55.0%
!!! GGGTTTTGGCGGGTTTTGGA+TGG - Chr2:71910804-71910823 MsG0280010592.01.T01:CDS 55.0%
AACTTGCAGGGCCGACCCAA+GGG - Chr2:71914976-71914995 MsG0280010592.01.T01:intron 60.0%
AGGGCTAGGCCACCAAAGCA+AGG - Chr2:71914995-71915014 MsG0280010592.01.T01:CDS 60.0%
CAGGCATAGCTAGGAGGGAG+AGG + Chr2:71911956-71911975 None:intergenic 60.0%
CGAGTTTGGAGGGGAAGGGA+GGG - Chr2:71910647-71910666 MsG0280010592.01.T01:intron 60.0%
CTCTCCCTCCTAGCTATGCC+TGG - Chr2:71911954-71911973 MsG0280010592.01.T01:intron 60.0%
GAGTTTGGAGGGGAAGGGAG+GGG - Chr2:71910648-71910667 MsG0280010592.01.T01:intron 60.0%
GGGCTAGGCCACCAAAGCAA+GGG - Chr2:71914996-71915015 MsG0280010592.01.T01:CDS 60.0%
TTGGATGGGAGGGGAAGGGA+AGG + Chr2:71910989-71911008 None:intergenic 60.0%
! AGGGGAAGGGAAGGCTTTGG+AGG + Chr2:71910980-71910999 None:intergenic 60.0%
! CGGGATTCAGGTTCGAACCC+CGG + Chr2:71913644-71913663 None:intergenic 60.0%
! GCTTTGGTGGCCTAGCCCTT+GGG + Chr2:71914994-71915013 None:intergenic 60.0%
! TGCTTTGGTGGCCTAGCCCT+TGG + Chr2:71914995-71915014 None:intergenic 60.0%
!! GGGGAAGGGAAGGCTTTGGA+GGG + Chr2:71910979-71910998 None:intergenic 60.0%
GAACTTGCAGGGCCGACCCA+AGG - Chr2:71914975-71914994 MsG0280010592.01.T01:intron 65.0%
GCGAGTTTGGAGGGGAAGGG+AGG - Chr2:71910646-71910665 MsG0280010592.01.T01:intron 65.0%
GGGAGGGGAAGGGAAGGCTT+TGG + Chr2:71910983-71911002 None:intergenic 65.0%
TGGTGGCCTAGCCCTTGGGT+CGG + Chr2:71914990-71915009 None:intergenic 65.0%
TTTGGAGGGGAAGGGAGGGG+CGG - Chr2:71910651-71910670 MsG0280010592.01.T01:intron 65.0%
!! AGGTCCCGGGGTGCTGTTCA+AGG - Chr2:71914123-71914142 MsG0280010592.01.T01:intron 65.0%
TTGGAGGGGAAGGGAGGGGC+GGG - Chr2:71910652-71910671 MsG0280010592.01.T01:intron 70.0%
GCAGGGCCGACCCAAGGGCT+AGG - Chr2:71914981-71915000 MsG0280010592.01.T01:intron 75.0%
GGGAAGGGAGGGGCGGGGTT+TGG - Chr2:71910658-71910677 MsG0280010592.01.T01:intron 75.0%
TGGAGGGGAAGGGAGGGGCG+GGG - Chr2:71910653-71910672 MsG0280010592.01.T01:intron 75.0%
Chromosome Type Strat End Strand Name
Chr2 gene 71909897 71915200 71909897 ID=MsG0280010592.01;Name=MsG0280010592.01
Chr2 mRNA 71909897 71915200 71909897 ID=MsG0280010592.01.T01;Parent=MsG0280010592.01;Name=MsG0280010592.01.T01;_AED=0.36;_eAED=0.40;_QI=0|0.81|0.75|1|1|1|12|433|409
Chr2 exon 71909897 71910386 71909897 ID=MsG0280010592.01.T01:exon:6940;Parent=MsG0280010592.01.T01
Chr2 exon 71910507 71910588 71910507 ID=MsG0280010592.01.T01:exon:6939;Parent=MsG0280010592.01.T01
Chr2 exon 71910757 71910824 71910757 ID=MsG0280010592.01.T01:exon:6938;Parent=MsG0280010592.01.T01
Chr2 exon 71910911 71911000 71910911 ID=MsG0280010592.01.T01:exon:6937;Parent=MsG0280010592.01.T01
Chr2 exon 71911086 71911163 71911086 ID=MsG0280010592.01.T01:exon:6936;Parent=MsG0280010592.01.T01
Chr2 exon 71912330 71912425 71912330 ID=MsG0280010592.01.T01:exon:6935;Parent=MsG0280010592.01.T01
Chr2 exon 71912519 71912599 71912519 ID=MsG0280010592.01.T01:exon:6934;Parent=MsG0280010592.01.T01
Chr2 exon 71913078 71913278 71913078 ID=MsG0280010592.01.T01:exon:6933;Parent=MsG0280010592.01.T01
Chr2 exon 71913399 71913491 71913399 ID=MsG0280010592.01.T01:exon:6932;Parent=MsG0280010592.01.T01
Chr2 exon 71913578 71913679 71913578 ID=MsG0280010592.01.T01:exon:6931;Parent=MsG0280010592.01.T01
Chr2 exon 71913789 71913852 71913789 ID=MsG0280010592.01.T01:exon:6930;Parent=MsG0280010592.01.T01
Chr2 exon 71914983 71915200 71914983 ID=MsG0280010592.01.T01:exon:6929;Parent=MsG0280010592.01.T01
Chr2 CDS 71914983 71915200 71914983 ID=MsG0280010592.01.T01:cds;Parent=MsG0280010592.01.T01
Chr2 CDS 71913789 71913852 71913789 ID=MsG0280010592.01.T01:cds;Parent=MsG0280010592.01.T01
Chr2 CDS 71913578 71913679 71913578 ID=MsG0280010592.01.T01:cds;Parent=MsG0280010592.01.T01
Chr2 CDS 71913399 71913491 71913399 ID=MsG0280010592.01.T01:cds;Parent=MsG0280010592.01.T01
Chr2 CDS 71913078 71913278 71913078 ID=MsG0280010592.01.T01:cds;Parent=MsG0280010592.01.T01
Chr2 CDS 71912519 71912599 71912519 ID=MsG0280010592.01.T01:cds;Parent=MsG0280010592.01.T01
Chr2 CDS 71912330 71912425 71912330 ID=MsG0280010592.01.T01:cds;Parent=MsG0280010592.01.T01
Chr2 CDS 71911086 71911163 71911086 ID=MsG0280010592.01.T01:cds;Parent=MsG0280010592.01.T01
Chr2 CDS 71910911 71911000 71910911 ID=MsG0280010592.01.T01:cds;Parent=MsG0280010592.01.T01
Chr2 CDS 71910757 71910824 71910757 ID=MsG0280010592.01.T01:cds;Parent=MsG0280010592.01.T01
Chr2 CDS 71910507 71910588 71910507 ID=MsG0280010592.01.T01:cds;Parent=MsG0280010592.01.T01
Chr2 CDS 71910330 71910386 71910330 ID=MsG0280010592.01.T01:cds;Parent=MsG0280010592.01.T01
Chr2 three_prime_UTR 71909897 71910329 71909897 ID=MsG0280010592.01.T01:three_prime_utr;Parent=MsG0280010592.01.T01
Gene Sequence

>MsG0280010592.01.T01

ATGGCTATGGCATCTCTTGTTGTACCAGGGCTCTCAAGTTCTCAACTTTATAGTCAAAATCATCTGAAAAGAGCACAAAAATGGGTTTTCCTTGGTGGGTTTTCTGTTAGAAAAGCAAAGATAATGATGCATGTGGTTGATCACAATCAAAGTCAAGTGGGTAGTGGTGGTGATGTCTCTCATGGATTGCATAAAGATTTGGTCTCCCTTCCAAGTGGTTTCACGACTTTGAATACTGGAAAACTTTGTTCAGAGTTATGGCGTTATGATTATAGACTAATTATCTCAGACTTCGCAACAACTGTTTTTTTTGTAGGGCCATTATCCATATCTGATATTGCGGCTGCTTCTGATGATCTTGCCAAAGTACGAATATCATATCAGGGGATACCAGGATCATACAGCGAGGATGCTGCACTTAAAGCTTACCCTAATTGTGAAACAATCTCATGCAGTGATTTTGAAGAGGCTTTTAAGGCTGTTGAGTTGTGGCTGGCTCATAAAGTTGTCATTCCAATTGAAAATACATCTGGTGGAAGCATTCACCGGAACTATGATTTACTTCTTCGTCATAGGCTTCACATTGTTGGCGAGGTGCAGTTGGCTACTAACCTCTCCCTCCTAGCTATGCCTGGTGTCAGAAAAGAGTTCCTTAAATGTGTTTTAAGTCATTCTCAGGCTCTTGCTTTAAGTGATACTTTCCTGAATAAATTAGGTGTTAGCAGAGAAAATGTTGATGATACAGCAGGTGCTGCTCAGATTGTAGCTTCAAATGGTCTGTATGATACTGGTGCCATTGCAAGCATTCGAGCTGCCAAAATCTATGGGCTTAATGTACTTGCAGAAGGAATCCAGGATGATTCTGAAATCATCAGTCGTTATCTTGTGCTTGCAAGGGATCCAATAATTCCAAGATCCAATAAGCCTTTTAAGACAAGCATTGTGTTTACACTGAATGAAGGTCCCGGGGTGCTGTTCAAGGTTTTGGCGGTATTTGCAATGAGGGACATAAATTTAACCAAGATTGAAAGTCGCCCACAAAGAAATCGGCCACTAAGAGTCGTTGACGACTCCAACACTGGAACTGCCAAATACTTTGATTACCTATTCTATATTGATTTTGAGGCATCTATGACTGAGCCCCGAGCACAAACCGCTTTAGAACATCTGCAGGAATTTGCAACATTTCTTCGAGTGCTTGGATGTTATCCCATTGATACAACCATATAG
Protein sequence

>MsG0280010592.01.T01

MAMASLVVPGLSSSQLYSQNHLKRAQKWVFLGGFSVRKAKIMMHVVDHNQSQVGSGGDVSHGLHKDLVSLPSGFTTLNTGKLCSELWRYDYRLIISDFATTVFFVGPLSISDIAAASDDLAKVRISYQGIPGSYSEDAALKAYPNCETISCSDFEEAFKAVELWLAHKVVIPIENTSGGSIHRNYDLLLRHRLHIVGEVQLATNLSLLAMPGVRKEFLKCVLSHSQALALSDTFLNKLGVSRENVDDTAGAAQIVASNGLYDTGAIASIRAAKIYGLNVLAEGIQDDSEIISRYLVLARDPIIPRSNKPFKTSIVFTLNEGPGVLFKVLAVFAMRDINLTKIESRPQRNRPLRVVDDSNTGTAKYFDYLFYIDFEASMTEPRAQTALEHLQEFATFLRVLGCYPIDTTI*