AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180001925.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180001925.01.T01 MTR_1g046620 90.689 784 5 2 1 716 1 784 0.0 1402
MsG0180001925.01.T01 MTR_6g038750 33.826 677 311 16 133 716 78 710 5.41e-107 342
MsG0180001925.01.T01 MTR_4g026450 37.365 463 215 4 132 521 100 560 3.55e-101 326
MsG0180001925.01.T01 MTR_0053s0030 33.054 596 288 9 132 640 88 659 3.70e-94 307
MsG0180001925.01.T01 MTR_1g009860 35.076 459 215 7 148 532 95 544 1.02e-80 269
MsG0180001925.01.T01 MTR_1g009860 35.076 459 215 7 148 532 95 544 2.72e-80 269
MsG0180001925.01.T01 MTR_3g082750 29.655 435 216 8 142 490 150 580 5.68e-46 175
MsG0180001925.01.T01 MTR_3g105760 32.975 279 171 3 331 609 350 612 4.75e-42 163
MsG0180001925.01.T01 MTR_3g105760 43.243 148 63 3 199 326 136 282 1.04e-26 116
MsG0180001925.01.T01 MTR_3g094740 28.365 416 190 10 173 484 195 606 2.38e-38 152
MsG0180001925.01.T01 MTR_3g094740 28.365 416 190 10 173 484 195 606 3.63e-38 152
MsG0180001925.01.T01 MTR_8g091710 28.109 402 183 9 187 484 198 597 4.08e-38 152
MsG0180001925.01.T01 MTR_0224s0030 28.986 207 138 1 311 517 36 233 1.84e-34 133
MsG0180001925.01.T01 MTR_1g095480 28.986 207 138 1 311 517 420 617 1.47e-31 132
MsG0180001925.01.T01 MTR_1g095480 35.526 228 116 6 129 326 135 361 2.79e-27 118
MsG0180001925.01.T01 MTR_1g095480 30.102 196 128 1 311 506 420 606 3.98e-31 129
MsG0180001925.01.T01 MTR_1g095480 35.526 228 116 6 129 326 135 361 1.36e-27 119
MsG0180001925.01.T01 MTR_0092s0090 42.208 154 61 3 235 388 216 341 4.40e-23 101
MsG0180001925.01.T01 MTR_5g068050 26.829 164 98 1 187 328 128 291 1.47e-13 74.3
MsG0180001925.01.T01 MTR_1g008980 27.670 206 121 6 144 325 9 210 1.62e-11 68.2
MsG0180001925.01.T01 MTR_4g104070 31.707 123 82 2 177 299 62 182 1.97e-11 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180001925.01.T01 AT3G24190 72.888 793 138 6 1 716 1 793 0.0 1104
MsG0180001925.01.T01 AT1G71810 32.460 687 317 17 121 716 62 692 1.02e-99 322
MsG0180001925.01.T01 AT1G79600 36.853 464 218 4 132 522 95 556 6.23e-98 318
MsG0180001925.01.T01 AT4G31390 36.175 434 219 7 148 532 131 555 7.76e-81 271
MsG0180001925.01.T01 AT4G31390 34.205 459 219 5 148 532 131 580 1.64e-80 270
MsG0180001925.01.T01 AT4G31390 34.439 392 174 5 217 534 1 383 3.20e-67 229
MsG0180001925.01.T01 AT3G07700 30.562 409 204 7 169 500 171 576 1.24e-44 171
MsG0180001925.01.T01 AT3G07700 30.562 409 204 7 169 500 171 576 1.24e-44 171
MsG0180001925.01.T01 AT3G07700 30.562 409 204 7 169 500 171 576 1.24e-44 171
MsG0180001925.01.T01 AT5G24970 31.889 323 183 7 285 601 334 625 4.40e-42 164
MsG0180001925.01.T01 AT5G24970 31.889 323 183 7 285 601 337 628 5.17e-42 163
MsG0180001925.01.T01 AT5G24970 31.153 321 188 6 285 601 376 667 1.13e-41 163
MsG0180001925.01.T01 AT5G24970 45.238 168 71 3 183 330 175 341 6.78e-32 133
MsG0180001925.01.T01 AT3G07700 29.318 440 198 10 169 500 171 605 4.27e-40 157
MsG0180001925.01.T01 AT5G64940 27.706 462 210 14 142 484 167 623 6.58e-36 145
MsG0180001925.01.T01 AT5G64940 27.706 462 210 14 142 484 167 623 6.58e-36 145
MsG0180001925.01.T01 AT2G39190 33.010 206 129 1 311 516 422 618 7.67e-35 142
MsG0180001925.01.T01 AT2G39190 34.703 219 120 4 129 325 142 359 7.71e-26 114
MsG0180001925.01.T01 AT2G39190 34.071 226 124 5 129 332 142 364 7.25e-27 113
MsG0180001925.01.T01 AT5G05200 27.439 164 97 1 187 328 129 292 1.67e-14 77.4
MsG0180001925.01.T01 AT4G24810 30.894 123 83 2 177 299 16 136 7.63e-13 70.5
MsG0180001925.01.T01 AT4G24810 30.894 123 83 2 177 299 16 136 7.93e-13 70.5
MsG0180001925.01.T01 AT4G24810 30.894 123 83 2 177 299 16 136 1.99e-12 70.5
MsG0180001925.01.T01 AT4G24810 30.894 123 83 2 177 299 59 179 2.37e-12 70.5
MsG0180001925.01.T01 AT4G24810 30.894 123 83 2 177 299 16 136 2.38e-12 70.1
MsG0180001925.01.T01 AT4G24810 30.894 123 83 2 177 299 16 136 2.38e-12 70.1

Find 234 sgRNAs with CRISPR-Local

Find 622 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATACTTTGCCCTTATAATT+AGG 0.089687 1:-29441340 MsG0180001925.01.T01:CDS
GCTTTACGTTACACTATATA+TGG 0.194317 1:-29440590 MsG0180001925.01.T01:CDS
TCAAGAACTCCAGCACTTTC+TGG 0.201641 1:+29439376 None:intergenic
CCCCGATAGCCCTAATTATA+AGG 0.235389 1:+29441330 None:intergenic
AGCTAGTATTACTGCATATT+GGG 0.247428 1:-29447288 MsG0180001925.01.T01:CDS
ATACTTTGCCCTTATAATTA+GGG 0.262467 1:-29441339 MsG0180001925.01.T01:CDS
ATCTCTCGGACAGGTATATA+AGG 0.270512 1:-29445372 MsG0180001925.01.T01:CDS
GATTAATGAACAAGGGTAAA+TGG 0.271358 1:+29438942 None:intergenic
AAACCTGTCAACGGTGTCTC+TGG 0.278838 1:-29448119 MsG0180001925.01.T01:CDS
AATTAGGGCTATCGGGGTTT+TGG 0.280919 1:-29441324 MsG0180001925.01.T01:CDS
AAGGGCCGCCTGAAGGAAAA+TGG 0.288141 1:-29445353 MsG0180001925.01.T01:CDS
TATATTATATTTATATATAC+TGG 0.288472 1:+29438966 None:intergenic
CAGCTAGTATTACTGCATAT+TGG 0.290471 1:-29447289 MsG0180001925.01.T01:CDS
GTAGGTACCATACCGAAAAT+AGG 0.294048 1:+29439471 None:intergenic
AATAGCCAGCATAATTGATT+TGG 0.302060 1:+29438865 None:intergenic
AATTATACCTGTGCAATATA+TGG 0.302271 1:+29441248 None:intergenic
ACGTGAAATTGTGACATCTT+TGG 0.305343 1:-29446197 MsG0180001925.01.T01:CDS
AGAACTTCTGCCAGTGTTGC+CGG 0.306484 1:-29439147 MsG0180001925.01.T01:CDS
AACTTTATCCTCTTCGGTTA+TGG 0.312758 1:+29439413 None:intergenic
GGTTGTTGTGGCGGTGGGAA+TGG 0.314697 1:+29448249 None:intergenic
CCCTTATAATTAGGGCTATC+GGG 0.332300 1:-29441331 MsG0180001925.01.T01:CDS
CGTGAAATTGTGACATCTTT+GGG 0.332945 1:-29446196 MsG0180001925.01.T01:CDS
TTTATTTGCATTCAGAGAAT+TGG 0.338434 1:-29448015 MsG0180001925.01.T01:intron
GTTGTTGTGGCGGTGGGAAT+GGG 0.338778 1:+29448250 None:intergenic
GGATCTAAATTGACTCCATC+TGG 0.344181 1:+29441491 None:intergenic
TTATTTCAGCTGCTTGATAC+TGG 0.344397 1:-29442926 MsG0180001925.01.T01:intron
TTCTTAGCAGATTATCTTCT+CGG 0.345784 1:-29439097 MsG0180001925.01.T01:CDS
TTCATTTAGTAATGATTGTT+AGG 0.346049 1:-29438813 MsG0180001925.01.T01:three_prime_UTR
CTAATTATAAGGGCAAAGTA+TGG 0.349214 1:+29441341 None:intergenic
TTTAACGAAGTCTTTCACTA+TGG 0.351984 1:+29441526 None:intergenic
CCTGAAGGAAAATGGGGATT+TGG 0.353495 1:-29445345 MsG0180001925.01.T01:CDS
GTCTTTGACCAGGCTTTAGA+AGG 0.356423 1:-29441446 MsG0180001925.01.T01:CDS
TGTGGGTGGATTAAGCATTA+AGG 0.366442 1:+29439025 None:intergenic
CAGTATAACTTTATCCTCTT+CGG 0.369075 1:+29439407 None:intergenic
TTGACCGACGATCAAAAGTA+TGG 0.371660 1:-29441593 MsG0180001925.01.T01:CDS
GAGAGAAGGTTTGGAGGGAG+TGG 0.374407 1:+29448459 None:intergenic
GCCCTTATAATTAGGGCTAT+CGG 0.378622 1:-29441332 MsG0180001925.01.T01:CDS
CAGGTCTTTCTTCATCATTT+CGG 0.380540 1:+29444970 None:intergenic
CCGGTCAGAATATCTCTTGC+CGG 0.382765 1:-29440435 MsG0180001925.01.T01:CDS
TAAGAGAGTGAGAGCTCAAA+TGG 0.384289 1:-29447974 MsG0180001925.01.T01:CDS
TACACTATATATGGGAAATC+TGG 0.386187 1:-29440581 MsG0180001925.01.T01:CDS
GCAACACTGGCAGAAGTTCT+TGG 0.389343 1:+29439150 None:intergenic
AGGTCTCCATTGACGTGGTT+GGG 0.391236 1:-29445069 MsG0180001925.01.T01:CDS
ACGAAGTCTTTCACTATGGC+TGG 0.396425 1:+29441530 None:intergenic
GTGCAGTTATTATCTGTTGC+TGG 0.398582 1:-29447233 MsG0180001925.01.T01:CDS
TTTGCAAGCACTGGCAAGAT+AGG 0.409252 1:+29441470 None:intergenic
CCGTCAACGGTTCTTCTTCA+AGG 0.410112 1:-29448154 MsG0180001925.01.T01:CDS
GAGGGAGGTTGTTGTGGCGG+TGG 0.410846 1:+29448243 None:intergenic
AGAGACACCGTTGACAGGTT+TGG 0.413955 1:+29448121 None:intergenic
TATGTGAATGAAGGTGAAAA+TGG 0.419960 1:-29445004 MsG0180001925.01.T01:CDS
AATGGAAGAAGATGAACAAT+TGG 0.420957 1:-29447956 MsG0180001925.01.T01:CDS
TTGGAAGGGATAGCTTTAGT+AGG 0.425825 1:-29441305 MsG0180001925.01.T01:CDS
TAGGTCTCCATTGACGTGGT+TGG 0.426485 1:-29445070 MsG0180001925.01.T01:CDS
CCCCTCCACCTTCTAAAGCC+TGG 0.432654 1:+29441438 None:intergenic
GTGGTGACAGGAGCAGGTTT+AGG 0.435550 1:+29448176 None:intergenic
TGGAAAGCTACCGGCGGCAA+TGG 0.437249 1:+29445503 None:intergenic
GGTCCAGCATACATAAAACT+TGG 0.438925 1:-29446175 MsG0180001925.01.T01:CDS
CCCGATAGCCCTAATTATAA+GGG 0.441218 1:+29441331 None:intergenic
GATAATCTGCTAAGAACATC+AGG 0.444598 1:+29439104 None:intergenic
TCATCAACAATGGCAAAATC+AGG 0.448007 1:+29441278 None:intergenic
AGAGGATCTGAAAGGGAGTA+TGG 0.453042 1:-29440480 MsG0180001925.01.T01:CDS
GCCCGTGTTTCCACTGGCTG+CGG 0.453117 1:+29440386 None:intergenic
GCTGCAGGTGACAGTATATC+AGG 0.453190 1:+29446133 None:intergenic
AAACTTGCAATACTTGACTT+TGG 0.456974 1:-29442851 MsG0180001925.01.T01:intron
TTCTCGGGTTGCGTGGGATG+TGG 0.458420 1:-29447201 MsG0180001925.01.T01:CDS
TGCAACTCTGTCATTGCTGC+AGG 0.460173 1:+29446118 None:intergenic
ATAACCAGAATGAGGTTGCC+AGG 0.461543 1:-29446231 MsG0180001925.01.T01:intron
TCTGTCAAGCACATCTAGTC+AGG 0.463598 1:-29439340 MsG0180001925.01.T01:intron
ATTGTGTATATTTGACAGAA+TGG 0.465438 1:-29439002 MsG0180001925.01.T01:three_prime_UTR
AGGGAGGTTGTTGTGGCGGT+GGG 0.465926 1:+29448244 None:intergenic
CTTTACGTTACACTATATAT+GGG 0.466517 1:-29440589 MsG0180001925.01.T01:CDS
CCTCGTCCAAAAGAAATTCT+CGG 0.466532 1:+29440324 None:intergenic
ATTTGCAGATGATGTGGCTA+TGG 0.471517 1:-29445589 MsG0180001925.01.T01:CDS
TTTATCCTCTTCGGTTATGG+TGG 0.473199 1:+29439416 None:intergenic
GTGAAAGACTTCGTTAAACT+TGG 0.475881 1:-29441521 MsG0180001925.01.T01:CDS
TTGACGGTGGTGACAGGAGC+AGG 0.477447 1:+29448170 None:intergenic
AGGGCCGCCCGTGTTTCCAC+TGG 0.477558 1:+29440380 None:intergenic
TATTTATATATACTGGTATG+TGG 0.478038 1:+29438973 None:intergenic
TTCGGTATGGTACCTACCAT+TGG 0.478269 1:-29439465 MsG0180001925.01.T01:CDS
TACCATTTGTTCCCTTGTCA+CGG 0.478757 1:+29439530 None:intergenic
CTCCATTGACGTGGTTGGGT+TGG 0.481448 1:-29445065 MsG0180001925.01.T01:CDS
AGGGCCGCCTGAAGGAAAAT+GGG 0.482279 1:-29445352 MsG0180001925.01.T01:CDS
AACCAACCCAACCACGTCAA+TGG 0.482943 1:+29445063 None:intergenic
AGCTTGGGCATATTACTAAC+CGG 0.483039 1:-29440454 MsG0180001925.01.T01:CDS
AGAGAGAGAGAAGGTTTGGA+GGG 0.485460 1:+29448454 None:intergenic
GTAACTGTCTCGAGAACAAA+AGG 0.487145 1:+29445302 None:intergenic
AACCTGTCAACGGTGTCTCT+GGG 0.487214 1:-29448118 MsG0180001925.01.T01:CDS
ACACCGTTGACAGGTTTGGC+AGG 0.488797 1:+29448125 None:intergenic
TGCCGTGACAAGGGAACAAA+TGG 0.489394 1:-29439532 MsG0180001925.01.T01:CDS
CGATTCCGCGGTAGATGAGT+TGG 0.493275 1:+29448291 None:intergenic
GACCAGGCTTTAGAAGGTGG+AGG 0.497384 1:-29441440 MsG0180001925.01.T01:CDS
AAAGGGAGTATGGCTGAGCT+TGG 0.498372 1:-29440470 MsG0180001925.01.T01:CDS
GAACCGTTGACGGTGGTGAC+AGG 0.499408 1:+29448164 None:intergenic
TGCATTCTGAACTCCTAGTA+AGG 0.499806 1:+29439497 None:intergenic
GTAAGAATTATGTCCTTACT+AGG 0.500477 1:-29439510 MsG0180001925.01.T01:CDS
TAGGTACCATACCGAAAATA+GGG 0.501824 1:+29439472 None:intergenic
GGTTGGGTTGGTTGACGAGT+GGG 0.502534 1:-29445053 MsG0180001925.01.T01:CDS
TCTTAGCAGATTATCTTCTC+GGG 0.503708 1:-29439096 MsG0180001925.01.T01:CDS
CCGTATCTCCGCTGTCGCCA+CGG 0.503815 1:-29448201 MsG0180001925.01.T01:CDS
TAATTATAAGGGCAAAGTAT+GGG 0.504028 1:+29441342 None:intergenic
GCAGAGATGCCCGGCAACAC+TGG 0.505198 1:+29439137 None:intergenic
CGGTCAGAATATCTCTTGCC+GGG 0.507660 1:-29440434 MsG0180001925.01.T01:CDS
GGAAAGCTACCGGCGGCAAT+GGG 0.509268 1:+29445504 None:intergenic
GTGCTGGAGTTCTTGACTGC+AGG 0.510421 1:-29439369 MsG0180001925.01.T01:CDS
TTCACGTATTTCAATAGCCC+TGG 0.512127 1:+29446213 None:intergenic
ATAAGCCAAATCAATTATGC+TGG 0.516259 1:-29438870 MsG0180001925.01.T01:three_prime_UTR
AATATGATCCGCACTCCTGA+TGG 0.516841 1:-29442875 MsG0180001925.01.T01:CDS
TTACCGATAGAGACTCTTGA+CGG 0.516996 1:-29440636 MsG0180001925.01.T01:intron
TGTCAAATATACACAATTGT+GGG 0.517727 1:+29439008 None:intergenic
GCTCTAATTGAAGAGGAACT+TGG 0.518860 1:-29445567 MsG0180001925.01.T01:CDS
AACCGCAGCCAGTGGAAACA+CGG 0.518965 1:-29440388 MsG0180001925.01.T01:CDS
GAACTTCTGCCAGTGTTGCC+GGG 0.520134 1:-29439146 MsG0180001925.01.T01:CDS
CCGTGGCGACAGCGGAGATA+CGG 0.520949 1:+29448201 None:intergenic
CTGTCAAATATACACAATTG+TGG 0.521036 1:+29439007 None:intergenic
GCTTGCAAAGGTCTTTGACC+AGG 0.523145 1:-29441456 MsG0180001925.01.T01:CDS
CAATATGCAGTAATACTAGC+TGG 0.523194 1:+29447290 None:intergenic
ACCCCAGAGACACCGTTGAC+AGG 0.523907 1:+29448116 None:intergenic
TCAAAGACCTTTGCAAGCAC+TGG 0.524525 1:+29441461 None:intergenic
TCTCTCGGACAGGTATATAA+GGG 0.528745 1:-29445371 MsG0180001925.01.T01:CDS
GACGGAGAGGGAGGTTGTTG+TGG 0.530054 1:+29448237 None:intergenic
GAGGTGGAGAGGATCTGAAA+GGG 0.530444 1:-29440487 MsG0180001925.01.T01:CDS
TCCTTCATTTGCAGATGATG+TGG 0.531156 1:-29445595 MsG0180001925.01.T01:CDS
GGTGTTACAGACTGGAATCC+CGG 0.531571 1:+29440416 None:intergenic
CGGATGAATCCCCTCGGCTA+AGG 0.532282 1:-29440616 MsG0180001925.01.T01:CDS
TTTGACCAGGCTTTAGAAGG+TGG 0.532307 1:-29441443 MsG0180001925.01.T01:CDS
AATTGCTCATCTCATCCATC+GGG 0.532594 1:-29441558 MsG0180001925.01.T01:CDS
AAACATCAACTTTCAGGAGC+TGG 0.534626 1:-29441411 MsG0180001925.01.T01:CDS
TTTCATGCTGATCCTCACCC+GGG 0.534686 1:-29442899 MsG0180001925.01.T01:CDS
ACCAGGCTTTAGAAGGTGGA+GGG 0.538065 1:-29441439 MsG0180001925.01.T01:CDS
GATTCCGCGGTAGATGAGTT+GGG 0.538602 1:+29448292 None:intergenic
GTGGGATGTGGTTAACAAGA+AGG 0.539335 1:-29447189 MsG0180001925.01.T01:CDS
GAGAATTGGTGATGTTTCGA+AGG 0.539608 1:-29448001 MsG0180001925.01.T01:CDS
GCTACCGGCGGCAATGGGAG+AGG 0.540075 1:+29445509 None:intergenic
TTATCCTCTTCGGTTATGGT+GGG 0.540872 1:+29439417 None:intergenic
AAACTTGGTTTCATCCCAGA+TGG 0.540981 1:-29441506 MsG0180001925.01.T01:CDS
TGCTAAAAGCGGAGGTGGAG+AGG 0.541034 1:-29440498 MsG0180001925.01.T01:CDS
GCCACATCATCTGCAAATGA+AGG 0.542980 1:+29445594 None:intergenic
GAATGGGACGAGCGGAGTAA+AGG 0.543025 1:+29448266 None:intergenic
TCCACTGGCTGCGGTTGTTG+AGG 0.543113 1:+29440395 None:intergenic
CCTTGAAGAAGAACCGTTGA+CGG 0.543371 1:+29448154 None:intergenic
TGACTCATGCAGATTGTCAA+GGG 0.543901 1:-29439561 MsG0180001925.01.T01:intron
GCTCCTGTCACCACCGTCAA+CGG 0.544211 1:-29448167 MsG0180001925.01.T01:CDS
GTATTGGACTCACCTGTGGC+AGG 0.546086 1:+29444951 None:intergenic
CCGCCTGCCAAACCTGTCAA+CGG 0.550645 1:-29448128 MsG0180001925.01.T01:CDS
AAGGGAGTATGGCTGAGCTT+GGG 0.550820 1:-29440469 MsG0180001925.01.T01:CDS
TGGTTGGGTTGGTTGACGAG+TGG 0.551378 1:-29445054 MsG0180001925.01.T01:CDS
TCTTCATCATTTCGGCGAAG+CGG 0.553476 1:+29444978 None:intergenic
ATATGCAGCATCTCTCGGAC+AGG 0.554501 1:-29445381 MsG0180001925.01.T01:intron
AAGTAGTGAATTTCTACCAT+TGG 0.554621 1:-29447321 MsG0180001925.01.T01:CDS
CAATTGCTCATCTCATCCAT+CGG 0.555375 1:-29441559 MsG0180001925.01.T01:CDS
AATTATAAGGGCAAAGTATG+GGG 0.557155 1:+29441343 None:intergenic
ACAACCTCCCTCTCCGTCGC+CGG 0.558871 1:-29448232 MsG0180001925.01.T01:CDS
GGTATATAAGGGCCGCCTGA+AGG 0.559240 1:-29445360 MsG0180001925.01.T01:CDS
GGTTAACAAGAAGGTTAAAG+AGG 0.566410 1:-29447180 MsG0180001925.01.T01:intron
ATGCGAGTTGCAACGGAGCG+AGG 0.567245 1:+29447257 None:intergenic
TTGACTCATGCAGATTGTCA+AGG 0.567338 1:-29439562 MsG0180001925.01.T01:intron
CTGCACAATGCGAGTTGCAA+CGG 0.568797 1:+29447250 None:intergenic
CGGATCATATTCCCCGGGTG+AGG 0.570070 1:+29442887 None:intergenic
TAATGATTCGCTCTTTGCTG+AGG 0.570101 1:-29447899 MsG0180001925.01.T01:CDS
AACGCCGGCGACGGAGAGGG+AGG 0.573158 1:+29448228 None:intergenic
AAGAGGAACTTGGTCAGCCA+TGG 0.574058 1:-29445557 MsG0180001925.01.T01:CDS
GAAACATATGCAGCATCTCT+CGG 0.574141 1:-29445386 MsG0180001925.01.T01:intron
CCTTATAATTAGGGCTATCG+GGG 0.576502 1:-29441330 MsG0180001925.01.T01:CDS
ACAGCTGCTAAAAGCGGAGG+TGG 0.577054 1:-29440503 MsG0180001925.01.T01:CDS
ACCGCAGCCAGTGGAAACAC+GGG 0.577557 1:-29440387 MsG0180001925.01.T01:CDS
GAACAATGTCCAGAAAGTGC+TGG 0.577732 1:-29439385 MsG0180001925.01.T01:CDS
AGGGCATTGATGCCGTGACA+AGG 0.579388 1:-29439542 MsG0180001925.01.T01:CDS
AGCCTATCCATATATTGCAC+AGG 0.579392 1:-29441255 MsG0180001925.01.T01:intron
TAGAACGCCGGCGACGGAGA+GGG 0.580222 1:+29448225 None:intergenic
GGAGTGCGGATCATATTCCC+CGG 0.581565 1:+29442881 None:intergenic
CCGTTGACAGGTTTGGCAGG+CGG 0.583407 1:+29448128 None:intergenic
AGCTGTAATAAAATTCTCAA+AGG 0.583728 1:+29440520 None:intergenic
TACGGTTAGAACGCCGGCGA+CGG 0.585185 1:+29448219 None:intergenic
GTTGTTGAGGTGTTACAGAC+TGG 0.588281 1:+29440408 None:intergenic
GATCTAAATTGACTCCATCT+GGG 0.588365 1:+29441492 None:intergenic
GTAAAGCACTCCTTAGCCGA+GGG 0.589316 1:+29440606 None:intergenic
TTTATTACAGCTGCTAAAAG+CGG 0.589524 1:-29440509 MsG0180001925.01.T01:CDS
GGAGGTGGAGAGGATCTGAA+AGG 0.591483 1:-29440488 MsG0180001925.01.T01:CDS
GGGCATTGATGCCGTGACAA+GGG 0.591814 1:-29439541 MsG0180001925.01.T01:CDS
GGCTTAAAGCGTCCAATGGT+AGG 0.593364 1:+29439453 None:intergenic
CCAGGCTTTAGAAGGTGGAG+GGG 0.593525 1:-29441438 MsG0180001925.01.T01:CDS
AGCACTTTAGCAGAGATGCC+CGG 0.594680 1:+29439128 None:intergenic
GCTATAATGATTAATGAACA+AGG 0.600527 1:+29438934 None:intergenic
GGCTATGGCTCTAATTGAAG+AGG 0.600972 1:-29445574 MsG0180001925.01.T01:CDS
TATCCTAAAAGGATAATCAA+AGG 0.601605 1:+29441367 None:intergenic
CCGGCAAGAGATATTCTGAC+CGG 0.601734 1:+29440435 None:intergenic
TCAACCTCTCCCATTGCCGC+CGG 0.601960 1:-29445513 MsG0180001925.01.T01:intron
ACCTCAACAACCGCAGCCAG+TGG 0.604477 1:-29440396 MsG0180001925.01.T01:CDS
TGTGGAAGTTGTTGTATGTG+TGG 0.606184 1:+29448496 None:intergenic
GGCGGTGGGAATGGGACGAG+CGG 0.606626 1:+29448258 None:intergenic
CGGAGATACGGTTAGAACGC+CGG 0.607587 1:+29448213 None:intergenic
GTGGTTGTTGTAAAGAAGTG+TGG 0.608871 1:+29448478 None:intergenic
GGAGAGGGAGGTTGTTGTGG+CGG 0.608879 1:+29448240 None:intergenic
TACCTGTGCAATATATGGAT+AGG 0.609388 1:+29441253 None:intergenic
TAACCAGAATGAGGTTGCCA+GGG 0.609399 1:-29446230 MsG0180001925.01.T01:intron
TGTTCAGCTACGTCTTGTTG+AGG 0.610684 1:-29447872 MsG0180001925.01.T01:intron
TGGATAGGCTTCATCAACAA+TGG 0.610971 1:+29441268 None:intergenic
TGCGGGCTTAAAGCGTCCAA+TGG 0.612041 1:+29439449 None:intergenic
CTATGGCTGGATAATCCCGA+TGG 0.613934 1:+29441543 None:intergenic
CAGTTATTATCTGTTGCTGG+AGG 0.617050 1:-29447230 MsG0180001925.01.T01:CDS
TATGGTGGGTATAAGAGCTG+CGG 0.617209 1:+29439431 None:intergenic
TATCTTGCCAGTGCTTGCAA+AGG 0.619857 1:-29441468 MsG0180001925.01.T01:CDS
GAGTTAGACTATGTGAATGA+AGG 0.620549 1:-29445013 MsG0180001925.01.T01:CDS
TTTAGGATCCGTGGCGACAG+CGG 0.620973 1:+29448193 None:intergenic
AGGAGCAGGTTTAGGATCCG+TGG 0.621321 1:+29448184 None:intergenic
ATGGTGGGTATAAGAGCTGC+GGG 0.623020 1:+29439432 None:intergenic
GCTAGTATTACTGCATATTG+GGG 0.624061 1:-29447287 MsG0180001925.01.T01:CDS
GTCCAGCATACATAAAACTT+GGG 0.627157 1:-29446174 MsG0180001925.01.T01:CDS
CAAATATACACAATTGTGGG+TGG 0.628614 1:+29439011 None:intergenic
ATTACAGCTGCTAAAAGCGG+AGG 0.631202 1:-29440506 MsG0180001925.01.T01:CDS
ACCTGTCAACGGTGTCTCTG+GGG 0.632413 1:-29448117 MsG0180001925.01.T01:intron
CGTAAAGCACTCCTTAGCCG+AGG 0.633199 1:+29440605 None:intergenic
GAGTAAACAGCATTCCACAA+TGG 0.633679 1:-29448327 MsG0180001925.01.T01:exon
AGAAGTTCTTGGATAATCTG+AGG 0.636314 1:+29439161 None:intergenic
AGTCTTATGAGAGGTCTTCG+TGG 0.637623 1:-29447931 MsG0180001925.01.T01:CDS
GAGTGCGGATCATATTCCCC+GGG 0.640776 1:+29442882 None:intergenic
TTAGAACGCCGGCGACGGAG+AGG 0.642104 1:+29448224 None:intergenic
GATGAAGAAAGACCTGCCAC+AGG 0.643598 1:-29444963 MsG0180001925.01.T01:intron
CTATAATGATTAATGAACAA+GGG 0.644603 1:+29438935 None:intergenic
GGATGATGCTGTATCCATTG+TGG 0.645105 1:+29448313 None:intergenic
CTAGCTGGATCATACACCAA+TGG 0.649269 1:+29447305 None:intergenic
TATACCCACCATAACCGAAG+AGG 0.649980 1:-29439421 MsG0180001925.01.T01:CDS
TCTTGACGGATGAATCCCCT+CGG 0.651670 1:-29440622 MsG0180001925.01.T01:CDS
ATTATAAGGGCAAAGTATGG+GGG 0.655388 1:+29441344 None:intergenic
GGGCCGCCTGAAGGAAAATG+GGG 0.676507 1:-29445351 MsG0180001925.01.T01:CDS
AAGAAGAAAACAGAACAGAG+AGG 0.677958 1:-29448353 MsG0180001925.01.T01:five_prime_UTR
TTCATGCTGATCCTCACCCG+GGG 0.678599 1:-29442898 MsG0180001925.01.T01:CDS
GGAGTAAAGGATCGATTCCG+CGG 0.682638 1:+29448279 None:intergenic
GCAGCCAGTGGAAACACGGG+CGG 0.689343 1:-29440384 MsG0180001925.01.T01:CDS
CAATTGGCAAGTCTTATGAG+AGG 0.695083 1:-29447940 MsG0180001925.01.T01:CDS
GTGTGGTGCGAAGTGTGACA+AGG 0.700349 1:+29448513 None:intergenic
TCATCCCAACTCATCTACCG+CGG 0.706405 1:-29448296 MsG0180001925.01.T01:CDS
TAAAGCACTCCTTAGCCGAG+GGG 0.715422 1:+29440607 None:intergenic
TGAAGAAGAACCGTTGACGG+TGG 0.718002 1:+29448157 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTTTATAATTATTATAA+TGG + Chr1:29443472-29443491 None:intergenic 0.0%
!! AAAAAAAATAGAAATATCAT+AGG + Chr1:29439871-29439890 None:intergenic 10.0%
!! AAAAAATTATAACTATGATA+TGG + Chr1:29445502-29445521 None:intergenic 10.0%
!! ATAAATATTTAGATATTAGT+CGG - Chr1:29440633-29440652 MsG0180001925.01.T01:intron 10.0%
!! CAAACTAATAAATATAATTA+AGG - Chr1:29443047-29443066 MsG0180001925.01.T01:intron 10.0%
!!! AATATTTATTCAATGAATTT+TGG + Chr1:29439822-29439841 None:intergenic 10.0%
!!! GATTTTTTATTTATGAAAAT+AGG - Chr1:29445126-29445145 MsG0180001925.01.T01:intron 10.0%
!!! TATCCATATTTTTAATTTTA+CGG + Chr1:29445303-29445322 None:intergenic 10.0%
!!! TGGTTTATTTTTAATTTTTT+TGG - Chr1:29443165-29443184 MsG0180001925.01.T01:intron 10.0%
!!! TTAATTTTTTTTAATTGCAA+AGG + Chr1:29445105-29445124 None:intergenic 10.0%
!! AAAATGAAGTTAAAAGAAAA+CGG + Chr1:29445457-29445476 None:intergenic 15.0%
!! AAGAAAGTAATATATCAAAA+TGG + Chr1:29441869-29441888 None:intergenic 15.0%
!! ACTAATAAATATAATTAAGG+AGG - Chr1:29443050-29443069 MsG0180001925.01.T01:intron 15.0%
!! AGTATAATAACTAAATTACT+TGG + Chr1:29447102-29447121 None:intergenic 15.0%
!! ATAAGTTTCAATTATCTAAA+AGG + Chr1:29441049-29441068 None:intergenic 15.0%
!! ATATTTATGAAATGTAATCT+TGG - Chr1:29444996-29445015 MsG0180001925.01.T01:CDS 15.0%
!! GTTTATAAAGAATTTACTTA+AGG + Chr1:29444370-29444389 None:intergenic 15.0%
!! TAGTATAAAAATATGATTGT+AGG + Chr1:29447241-29447260 None:intergenic 15.0%
!! TATACATTGTAAAACAAAAT+TGG - Chr1:29445354-29445373 MsG0180001925.01.T01:CDS 15.0%
!! TTACCGTAAAATTAAAAATA+TGG - Chr1:29445297-29445316 MsG0180001925.01.T01:intron 15.0%
!!! AAAATAATTTTGACAAATTC+AGG - Chr1:29444267-29444286 MsG0180001925.01.T01:intron 15.0%
!!! AAATAATTTTGACAAATTCA+GGG - Chr1:29444268-29444287 MsG0180001925.01.T01:intron 15.0%
!!! AAATGAACAATAATTTTGTT+TGG + Chr1:29448518-29448537 None:intergenic 15.0%
!!! AAATGGTTACTATTAAATTT+TGG - Chr1:29446474-29446493 MsG0180001925.01.T01:intron 15.0%
!!! AATAATAAATTACCTGTTTT+AGG + Chr1:29443673-29443692 None:intergenic 15.0%
!!! GAAATTTTTTTTTTAGTGTA+GGG - Chr1:29444326-29444345 MsG0180001925.01.T01:intron 15.0%
!!! TATTAGTTTGTTTCTAAAAT+AGG + Chr1:29443037-29443056 None:intergenic 15.0%
!!! TGAAATTTTTTTTTTAGTGT+AGG - Chr1:29444325-29444344 MsG0180001925.01.T01:intron 15.0%
!!! TTTTTAATTTCTTGCATATT+TGG - Chr1:29440731-29440750 MsG0180001925.01.T01:intron 15.0%
!! AAATGTCTCTAAATAAGTAA+TGG + Chr1:29444058-29444077 None:intergenic 20.0%
!! AATACTAATGATTATACAAC+AGG + Chr1:29443897-29443916 None:intergenic 20.0%
!! ATAATCTATCTAAATTACCA+GGG + Chr1:29444027-29444046 None:intergenic 20.0%
!! ATTATAAAAATTGTCATGAG+AGG - Chr1:29443480-29443499 MsG0180001925.01.T01:intron 20.0%
!! CATCATTTATCATAATGATT+AGG + Chr1:29445696-29445715 None:intergenic 20.0%
!! CGATATAGATTCATTTAAAA+AGG + Chr1:29441327-29441346 None:intergenic 20.0%
!! CTAATCATTATGATAAATGA+TGG - Chr1:29445694-29445713 MsG0180001925.01.T01:intron 20.0%
!! CTATAATGATTAATGAACAA+GGG + Chr1:29448412-29448431 None:intergenic 20.0%
!! GTATATTCAATCATCATAAA+TGG + Chr1:29439914-29439933 None:intergenic 20.0%
!! GTTAATAACTTGATATTAGT+TGG - Chr1:29441382-29441401 MsG0180001925.01.T01:CDS 20.0%
!! TAAAAGAACTTAAACATTAG+TGG + Chr1:29445664-29445683 None:intergenic 20.0%
!! TATAATCTATCTAAATTACC+AGG + Chr1:29444028-29444047 None:intergenic 20.0%
!! TATTTATATATACTGGTATG+TGG + Chr1:29448374-29448393 None:intergenic 20.0%
!! TGTGTTTCAAAAATTTATGT+AGG - Chr1:29443857-29443876 MsG0180001925.01.T01:intron 20.0%
!! TTATTTATCTATTTGTCTGT+GGG - Chr1:29448139-29448158 MsG0180001925.01.T01:CDS 20.0%
!! TTCATTTAGTAATGATTGTT+AGG - Chr1:29448531-29448550 MsG0180001925.01.T01:five_prime_UTR 20.0%
!!! AAAGTCGTATATAATTTTTG+TGG - Chr1:29447443-29447462 MsG0180001925.01.T01:intron 20.0%
!!! AAGGTTAAGTTTTTCATAAT+AGG - Chr1:29442811-29442830 MsG0180001925.01.T01:intron 20.0%
!!! AAGTTATTAACTTTTTTCTC+TGG + Chr1:29441373-29441392 None:intergenic 20.0%
!!! CATAAGAAATAAGAAAGTAT+TGG + Chr1:29442412-29442431 None:intergenic 20.0%
!!! GATAAATTTGTTTTGATTTG+AGG - Chr1:29440513-29440532 MsG0180001925.01.T01:CDS 20.0%
!!! TACATAAATTTTTGAAACAC+AGG + Chr1:29443858-29443877 None:intergenic 20.0%
!!! TGATGTAGATATAACAATTT+TGG - Chr1:29446435-29446454 MsG0180001925.01.T01:intron 20.0%
!!! TGATTTATTTTAGCTTAACA+AGG - Chr1:29448106-29448125 MsG0180001925.01.T01:intron 20.0%
!!! TGCTTTTTACCTAATTTTTT+AGG - Chr1:29442255-29442274 MsG0180001925.01.T01:intron 20.0%
!!! TTAATTTTACGGTAAATATC+TGG + Chr1:29445292-29445311 None:intergenic 20.0%
!!! TTCTGGTATTTAAAATCTAA+TGG + Chr1:29444916-29444935 None:intergenic 20.0%
!!! TTTTATACTAATTACAACAG+AGG - Chr1:29447251-29447270 MsG0180001925.01.T01:CDS 20.0%
! AAAATTAGGTAAAAAGCAGT+TGG + Chr1:29442253-29442272 None:intergenic 25.0%
! AAACTAAAGATAGTTTCTGA+CGG + Chr1:29440371-29440390 None:intergenic 25.0%
! AAATTAGGTAAAAAGCAGTT+GGG + Chr1:29442252-29442271 None:intergenic 25.0%
! AACGATAAAATACTCTATCA+AGG - Chr1:29442542-29442561 MsG0180001925.01.T01:intron 25.0%
! AATAATGAAACACAATTGTC+TGG - Chr1:29441473-29441492 MsG0180001925.01.T01:CDS 25.0%
! AATCTATATCGTCATACATA+GGG - Chr1:29441336-29441355 MsG0180001925.01.T01:CDS 25.0%
! AATTATACCTGTGCAATATA+TGG + Chr1:29446099-29446118 None:intergenic 25.0%
! ACACTTGTCTTAATGTTTAA+AGG + Chr1:29445554-29445573 None:intergenic 25.0%
! ACAGAAAAAATTAAGCCAAT+GGG - Chr1:29446332-29446351 MsG0180001925.01.T01:intron 25.0%
! AGATGATTAACATTAAACCA+TGG + Chr1:29443437-29443456 None:intergenic 25.0%
! AGCTGTAATAAAATTCTCAA+AGG + Chr1:29446827-29446846 None:intergenic 25.0%
! AGTAATATATCAAAATGGTC+TGG + Chr1:29441864-29441883 None:intergenic 25.0%
! ATACTTTGCCCTTATAATTA+GGG - Chr1:29446005-29446024 MsG0180001925.01.T01:intron 25.0%
! ATATGTATTGTGTAGAGAAA+CGG + Chr1:29443401-29443420 None:intergenic 25.0%
! ATGGAAATGGCATATATTTA+TGG + Chr1:29439895-29439914 None:intergenic 25.0%
! ATTCATTTAAAAAGGACACA+TGG + Chr1:29441319-29441338 None:intergenic 25.0%
! ATTGTGTATATTTGACAGAA+TGG - Chr1:29448342-29448361 MsG0180001925.01.T01:five_prime_UTR 25.0%
! CAATAAAGTAAAAGAAGTCA+AGG + Chr1:29447158-29447177 None:intergenic 25.0%
! CTCAAATTGAATAAATCAGT+TGG - Chr1:29447495-29447514 MsG0180001925.01.T01:intron 25.0%
! CTGAACTAGATAATATTTCT+TGG - Chr1:29444716-29444735 MsG0180001925.01.T01:intron 25.0%
! CTTATTTATCTATTTGTCTG+TGG - Chr1:29448138-29448157 MsG0180001925.01.T01:CDS 25.0%
! CTTTACGTTACACTATATAT+GGG - Chr1:29446755-29446774 MsG0180001925.01.T01:intron 25.0%
! GATGAAAGAATAAAGAAACA+AGG - Chr1:29442792-29442811 MsG0180001925.01.T01:intron 25.0%
! GCTATAATGATTAATGAACA+AGG + Chr1:29448413-29448432 None:intergenic 25.0%
! GGAATTATTGTACTTTCATA+TGG + Chr1:29447129-29447148 None:intergenic 25.0%
! GTCATTTCAATTTATACAGA+GGG - Chr1:29443763-29443782 MsG0180001925.01.T01:intron 25.0%
! GTTATCCTTTGTATATATAG+AGG - Chr1:29442940-29442959 MsG0180001925.01.T01:intron 25.0%
! TAATTATAAGGGCAAAGTAT+GGG + Chr1:29446005-29446024 None:intergenic 25.0%
! TACAGAAAAAATTAAGCCAA+TGG - Chr1:29446331-29446350 MsG0180001925.01.T01:intron 25.0%
! TATAACTTCGAAATACATAG+AGG + Chr1:29442610-29442629 None:intergenic 25.0%
! TATCATAATGATTAGGATAG+TGG + Chr1:29445689-29445708 None:intergenic 25.0%
! TATCCTAAAAGGATAATCAA+AGG + Chr1:29445980-29445999 None:intergenic 25.0%
! TATCTAAAAGGATTGATACA+GGG + Chr1:29441037-29441056 None:intergenic 25.0%
! TCAATCATCATAAATGGAAA+TGG + Chr1:29439908-29439927 None:intergenic 25.0%
! TCTTGTCGATAACTAATATT+AGG - Chr1:29440288-29440307 MsG0180001925.01.T01:intron 25.0%
! TGGAAATGGCATATATTTAT+GGG + Chr1:29439894-29439913 None:intergenic 25.0%
! TGTAACCTCTATATATACAA+AGG + Chr1:29442948-29442967 None:intergenic 25.0%
! TGTCAAATATACACAATTGT+GGG + Chr1:29448339-29448358 None:intergenic 25.0%
! TTATCTAAAAGGATTGATAC+AGG + Chr1:29441038-29441057 None:intergenic 25.0%
! TTTATTTGCATTCAGAGAAT+TGG - Chr1:29439329-29439348 MsG0180001925.01.T01:intron 25.0%
! TTTCACATTTGAATCAAACA+AGG + Chr1:29444557-29444576 None:intergenic 25.0%
!! AAAACAAAATTGGTTTCAGT+AGG - Chr1:29445364-29445383 MsG0180001925.01.T01:CDS 25.0%
!! AACTTCATAATGTCTTATTG+AGG + Chr1:29444629-29444648 None:intergenic 25.0%
!! AATTTTCCGATGAAGAATTT+TGG + Chr1:29446536-29446555 None:intergenic 25.0%
!! AGAAACTATCTTTAGTTTCT+AGG - Chr1:29440373-29440392 MsG0180001925.01.T01:CDS 25.0%
!! ATATTCATGACAGATTTTGA+TGG - Chr1:29446566-29446585 MsG0180001925.01.T01:intron 25.0%
!! ATATTTTCATAACCAGAATG+AGG - Chr1:29441105-29441124 MsG0180001925.01.T01:intron 25.0%
!! ATTCAATGAATTTTGGATTG+AGG + Chr1:29439815-29439834 None:intergenic 25.0%
!! ATTGTCGAAGTTTTCAAATT+TGG - Chr1:29447215-29447234 MsG0180001925.01.T01:CDS 25.0%
!! CAAGAAATATTATCTAGTTC+AGG + Chr1:29444718-29444737 None:intergenic 25.0%
!! GTTGGTAAAATTAACTGAAA+AGG - Chr1:29447513-29447532 MsG0180001925.01.T01:intron 25.0%
!! TAACTGAAAAGGTTTGTTTA+TGG - Chr1:29447524-29447543 MsG0180001925.01.T01:intron 25.0%
!! TAGATATAACAATTTTGGAC+AGG - Chr1:29446440-29446459 MsG0180001925.01.T01:intron 25.0%
!! TGTCATTTCAATTTATACAG+AGG - Chr1:29443762-29443781 MsG0180001925.01.T01:intron 25.0%
!! TTACCTTTGATTATCCTTTT+AGG - Chr1:29445974-29445993 MsG0180001925.01.T01:intron 25.0%
!! TTCAATGAATTTTGGATTGA+GGG + Chr1:29439814-29439833 None:intergenic 25.0%
!! TTCTTTTGTCTATGACTTAA+AGG + Chr1:29440477-29440496 None:intergenic 25.0%
!! TTTGTTGTAATTACTTGTAC+AGG + Chr1:29442972-29442991 None:intergenic 25.0%
!! TTTTAAATGAACCACAAATC+AGG + Chr1:29445406-29445425 None:intergenic 25.0%
!! TTTTGAATTAACTAACCAAC+AGG - Chr1:29441920-29441939 MsG0180001925.01.T01:intron 25.0%
!!! ATAAGTTTTGTGAGTTTGTT+TGG + Chr1:29439765-29439784 None:intergenic 25.0%
!!! ATTATTTTAATGCTTTCAGC+TGG - Chr1:29443687-29443706 MsG0180001925.01.T01:intron 25.0%
!!! CCATTGATTTATTCATTATC+CGG - Chr1:29442064-29442083 MsG0180001925.01.T01:intron 25.0%
!!! GAATGTTTTAATGTTTGAAC+TGG - Chr1:29444944-29444963 MsG0180001925.01.T01:intron 25.0%
!!! GGATTTTATGTTATTTGATG+TGG - Chr1:29439968-29439987 MsG0180001925.01.T01:intron 25.0%
!!! GTGTATTTTTTCAATTGTGT+AGG - Chr1:29439993-29440012 MsG0180001925.01.T01:intron 25.0%
!!! GTTTCATTATTCTGAAATGA+AGG + Chr1:29441464-29441483 None:intergenic 25.0%
!!! TAAGTTTTGTGAGTTTGTTT+GGG + Chr1:29439764-29439783 None:intergenic 25.0%
!!! TAGTCTTAGACTTAGTTTTA+TGG - Chr1:29446504-29446523 MsG0180001925.01.T01:intron 25.0%
!!! TGGTAAACTACTTTTTTTCT+TGG - Chr1:29439947-29439966 MsG0180001925.01.T01:intron 25.0%
!!! TGTTTTGTTATTTGCAATTG+TGG - Chr1:29445573-29445592 MsG0180001925.01.T01:CDS 25.0%
!!! TTCATCGATTTCAAAAACAT+TGG + Chr1:29446248-29446267 None:intergenic 25.0%
!!! TTTTTTCCGAGAATTTCTTT+TGG - Chr1:29447014-29447033 MsG0180001925.01.T01:intron 25.0%
AAAAATTTCTGTCTAGTGTC+TGG - Chr1:29446356-29446375 MsG0180001925.01.T01:intron 30.0%
AAAACATTCATTGCAAGTTC+TGG + Chr1:29444933-29444952 None:intergenic 30.0%
AAAAGTTAGCAATCCATTGT+CGG + Chr1:29443949-29443968 None:intergenic 30.0%
AAACTTGCAATACTTGACTT+TGG - Chr1:29444493-29444512 MsG0180001925.01.T01:intron 30.0%
AACTAAAGATAGTTTCTGAC+GGG + Chr1:29440370-29440389 None:intergenic 30.0%
AAGTAGTGAATTTCTACCAT+TGG - Chr1:29440023-29440042 MsG0180001925.01.T01:intron 30.0%
AATAGCCAGCATAATTGATT+TGG + Chr1:29448482-29448501 None:intergenic 30.0%
AATGGAAGAAGATGAACAAT+TGG - Chr1:29439388-29439407 MsG0180001925.01.T01:CDS 30.0%
AATTATAAGGGCAAAGTATG+GGG + Chr1:29446004-29446023 None:intergenic 30.0%
AGCTAGTATTACTGCATATT+GGG - Chr1:29440056-29440075 MsG0180001925.01.T01:intron 30.0%
AGTAAAATCTGAACAAGGTA+TGG - Chr1:29447352-29447371 MsG0180001925.01.T01:intron 30.0%
AGTACACCAAAATTCTTCAT+CGG - Chr1:29446527-29446546 MsG0180001925.01.T01:intron 30.0%
ATAAGCCAAATCAATTATGC+TGG - Chr1:29448474-29448493 MsG0180001925.01.T01:five_prime_UTR 30.0%
ATATAGAGAGAGAAATAGAG+TGG + Chr1:29443346-29443365 None:intergenic 30.0%
ATATCACAAATAAGCAACCA+CGG + Chr1:29441089-29441108 None:intergenic 30.0%
ATCAGACAGTAAAAATGCTA+GGG + Chr1:29446986-29447005 None:intergenic 30.0%
ATGACTCCAAAAACAGTTTA+TGG + Chr1:29447610-29447629 None:intergenic 30.0%
ATGATGAGACTAAGAACATT+AGG - Chr1:29443096-29443115 MsG0180001925.01.T01:intron 30.0%
ATTAAAGATGTCAAGGATAG+TGG + Chr1:29443995-29444014 None:intergenic 30.0%
ATTCAAATGTGAAATGCATG+AGG - Chr1:29444563-29444582 MsG0180001925.01.T01:intron 30.0%
CAATGGAGACCTAAAAAATT+AGG + Chr1:29442267-29442286 None:intergenic 30.0%
CAGTATAACTTTATCCTCTT+CGG + Chr1:29447940-29447959 None:intergenic 30.0%
CAGTTAATTAGTTAGGACTT+AGG + Chr1:29442637-29442656 None:intergenic 30.0%
CATACTTTGCCCTTATAATT+AGG - Chr1:29446004-29446023 MsG0180001925.01.T01:intron 30.0%
CCGGATAATGAATAAATCAA+TGG + Chr1:29442067-29442086 None:intergenic 30.0%
CTAATTATAAGGGCAAAGTA+TGG + Chr1:29446006-29446025 None:intergenic 30.0%
CTAGTGAATGATTGTATGTA+TGG - Chr1:29443211-29443230 MsG0180001925.01.T01:intron 30.0%
CTGTCAAATATACACAATTG+TGG + Chr1:29448340-29448359 None:intergenic 30.0%
CTTGGAAGATTCTTTGTATA+TGG - Chr1:29445014-29445033 MsG0180001925.01.T01:CDS 30.0%
GAATCTATATCGTCATACAT+AGG - Chr1:29441335-29441354 MsG0180001925.01.T01:CDS 30.0%
GATTAATGAACAAGGGTAAA+TGG + Chr1:29448405-29448424 None:intergenic 30.0%
GCTTATTCTTCATAAAGCAT+GGG - Chr1:29445050-29445069 MsG0180001925.01.T01:CDS 30.0%
GCTTTACGTTACACTATATA+TGG - Chr1:29446754-29446773 MsG0180001925.01.T01:intron 30.0%
GTAAGAATTATGTCCTTACT+AGG - Chr1:29447834-29447853 MsG0180001925.01.T01:intron 30.0%
GTGAAACATTAAAGATGTCA+AGG + Chr1:29444002-29444021 None:intergenic 30.0%
GTTAGAGCAGTTAATTAGTT+AGG + Chr1:29442644-29442663 None:intergenic 30.0%
TAAAGTAAAAGAAGTCAAGG+AGG + Chr1:29447155-29447174 None:intergenic 30.0%
TACACTATATATGGGAAATC+TGG - Chr1:29446763-29446782 MsG0180001925.01.T01:intron 30.0%
TATAGAGAGAGAAATAGAGT+GGG + Chr1:29443345-29443364 None:intergenic 30.0%
TATCAGACAGTAAAAATGCT+AGG + Chr1:29446987-29447006 None:intergenic 30.0%
TATGTGAATGAAGGTGAAAA+TGG - Chr1:29442340-29442359 MsG0180001925.01.T01:intron 30.0%
TCTAGTGTCTGGAAATAAAA+GGG - Chr1:29446367-29446386 MsG0180001925.01.T01:intron 30.0%
TCTTATCACAGTTCAATTTC+AGG - Chr1:29443514-29443533 MsG0180001925.01.T01:intron 30.0%
TCTTCACACAACACATTAAT+CGG - Chr1:29442581-29442600 MsG0180001925.01.T01:intron 30.0%
TCTTTATCTTCCTAGGTATT+CGG + Chr1:29442523-29442542 None:intergenic 30.0%
TGATATTGTTTAGACTGGAA+AGG - Chr1:29444144-29444163 MsG0180001925.01.T01:intron 30.0%
TGCTTATTCTTCATAAAGCA+TGG - Chr1:29445049-29445068 MsG0180001925.01.T01:CDS 30.0%
TTAAACCATGGTAGTCAAAT+CGG + Chr1:29443425-29443444 None:intergenic 30.0%
TTATCGTTCTTTATCTTCCT+AGG + Chr1:29442530-29442549 None:intergenic 30.0%
TTCAAATGTGAAATGCATGA+GGG - Chr1:29444564-29444583 MsG0180001925.01.T01:intron 30.0%
TTCTTAGCAGATTATCTTCT+CGG - Chr1:29448247-29448266 MsG0180001925.01.T01:CDS 30.0%
TTTAACGAAGTCTTTCACTA+TGG + Chr1:29445821-29445840 None:intergenic 30.0%
TTTATTACAGCTGCTAAAAG+CGG - Chr1:29446835-29446854 MsG0180001925.01.T01:intron 30.0%
TTTGTATATGGTATAAGCGT+AGG - Chr1:29445026-29445045 MsG0180001925.01.T01:CDS 30.0%
! AAATTGGTTTCAGTAGGAAA+TGG - Chr1:29445370-29445389 MsG0180001925.01.T01:CDS 30.0%
! AGCATTTTTACTGTCTGATA+AGG - Chr1:29446987-29447006 MsG0180001925.01.T01:intron 30.0%
! ATTTGAGGTGAATGATAGAT+CGG - Chr1:29440528-29440547 MsG0180001925.01.T01:CDS 30.0%
! CATTTTTACTGTCTGATAAG+GGG - Chr1:29446989-29447008 MsG0180001925.01.T01:intron 30.0%
! GATCATATTGCCTTTTATGA+GGG - Chr1:29442833-29442852 MsG0180001925.01.T01:intron 30.0%
! GATGTCTAAGTTTTACTTGA+AGG - Chr1:29446210-29446229 MsG0180001925.01.T01:CDS 30.0%
! GCATTTTTACTGTCTGATAA+GGG - Chr1:29446988-29447007 MsG0180001925.01.T01:intron 30.0%
! GTGAAATTTAACCTGATTTG+TGG - Chr1:29445392-29445411 MsG0180001925.01.T01:intron 30.0%
! TTTTGTGGTAAAATTCCACA+TGG - Chr1:29447458-29447477 MsG0180001925.01.T01:intron 30.0%
!! AATATACATAAGCATTGAGC+TGG - Chr1:29439927-29439946 MsG0180001925.01.T01:intron 30.0%
!! AATTTGTTGCAACTGATTGA+TGG - Chr1:29443145-29443164 MsG0180001925.01.T01:intron 30.0%
!! ATATTAGGCGTGTTGATTTA+AGG - Chr1:29440303-29440322 MsG0180001925.01.T01:intron 30.0%
!!! AAAAGTGTTTTTACCGACAA+TGG - Chr1:29443933-29443952 MsG0180001925.01.T01:intron 30.0%
!!! AACTTCATTTTTTCTCCTTC+AGG - Chr1:29445466-29445485 MsG0180001925.01.T01:intron 30.0%
!!! AGACAGAAATTTTTTCCCAT+TGG + Chr1:29446350-29446369 None:intergenic 30.0%
!!! TACAATTGTTTTGGGTTCAA+GGG - Chr1:29444296-29444315 MsG0180001925.01.T01:intron 30.0%
!!! TTACAATTGTTTTGGGTTCA+AGG - Chr1:29444295-29444314 MsG0180001925.01.T01:intron 30.0%
!!! TTCTGAGGTTTTTTTGTTCT+TGG - Chr1:29441691-29441710 MsG0180001925.01.T01:intron 30.0%
AAACAAAACTTAAGCGCCAT+AGG + Chr1:29447564-29447583 None:intergenic 35.0%
AACTGCTCTAACAGTTTACA+TGG - Chr1:29442652-29442671 MsG0180001925.01.T01:intron 35.0%
AACTTTATCCTCTTCGGTTA+TGG + Chr1:29447934-29447953 None:intergenic 35.0%
AAGAAGAAAACAGAACAGAG+AGG - Chr1:29438991-29439010 MsG0180001925.01.T01:three_prime_UTR 35.0%
AAGAGAAGAAACAGAAAGCA+AGG + Chr1:29440272-29440291 None:intergenic 35.0%
AAGATGTAGCTTAAAGCTCA+CGG + Chr1:29443732-29443751 None:intergenic 35.0%
ACAAGAAAACAGATACCTGT+TGG + Chr1:29441938-29441957 None:intergenic 35.0%
ACGTGAAATTGTGACATCTT+TGG - Chr1:29441147-29441166 MsG0180001925.01.T01:intron 35.0%
ACTCCAAAAACAGTTTATGG+TGG + Chr1:29447607-29447626 None:intergenic 35.0%
AGAAGTTCTTGGATAATCTG+AGG + Chr1:29448186-29448205 None:intergenic 35.0%
AGACAGCAATTCTTGTAAGA+AGG + Chr1:29441593-29441612 None:intergenic 35.0%
AGAGAAGAAACAGAAAGCAA+GGG + Chr1:29440271-29440290 None:intergenic 35.0%
AGATATGAAGCCCTCATAAA+AGG + Chr1:29442846-29442865 None:intergenic 35.0%
AGCGTAGTAAAATCTGAACA+AGG - Chr1:29447347-29447366 MsG0180001925.01.T01:intron 35.0%
ATGTTATCATGTGTGTTGCA+TGG + Chr1:29440664-29440683 None:intergenic 35.0%
ATTATAAGGGCAAAGTATGG+GGG + Chr1:29446003-29446022 None:intergenic 35.0%
ATTTGGGTCCTCTAAATTCA+GGG - Chr1:29444214-29444233 MsG0180001925.01.T01:intron 35.0%
CAAATATACACAATTGTGGG+TGG + Chr1:29448336-29448355 None:intergenic 35.0%
CAATATGCAGTAATACTAGC+TGG + Chr1:29440057-29440076 None:intergenic 35.0%
CACGTTGAAATCAGTGAATT+CGG + Chr1:29439305-29439324 None:intergenic 35.0%
CAGCTAGTATTACTGCATAT+TGG - Chr1:29440055-29440074 MsG0180001925.01.T01:intron 35.0%
CAGGTCTTTCTTCATCATTT+CGG + Chr1:29442377-29442396 None:intergenic 35.0%
CCTTGACACATATCATCAAT+AGG + Chr1:29442898-29442917 None:intergenic 35.0%
CGTGAAATTGTGACATCTTT+GGG - Chr1:29441148-29441167 MsG0180001925.01.T01:intron 35.0%
CTAGTGTCTGGAAATAAAAG+GGG - Chr1:29446368-29446387 MsG0180001925.01.T01:intron 35.0%
CTCTAAATAAGTAATGGCAG+AGG + Chr1:29444052-29444071 None:intergenic 35.0%
CTTACAGCAAGTATACATCA+AGG - Chr1:29443552-29443571 MsG0180001925.01.T01:intron 35.0%
CTTTATCTTCCTAGGTATTC+GGG + Chr1:29442522-29442541 None:intergenic 35.0%
GACACATGGCATATATAGAA+GGG + Chr1:29441305-29441324 None:intergenic 35.0%
GACAGCAATTCTTGTAAGAA+GGG + Chr1:29441592-29441611 None:intergenic 35.0%
GAGTTAGACTATGTGAATGA+AGG - Chr1:29442331-29442350 MsG0180001925.01.T01:intron 35.0%
GATAATCTGCTAAGAACATC+AGG + Chr1:29448243-29448262 None:intergenic 35.0%
GCACAAAAAAAATTGCAGTG+TGG + Chr1:29446637-29446656 None:intergenic 35.0%
GCTAGTATTACTGCATATTG+GGG - Chr1:29440057-29440076 MsG0180001925.01.T01:intron 35.0%
GGAAAGAAAGTAACATCAGT+TGG + Chr1:29442734-29442753 None:intergenic 35.0%
GGCAAAAAACATCAACTTTC+AGG - Chr1:29445927-29445946 MsG0180001925.01.T01:intron 35.0%
GGTTAACAAGAAGGTTAAAG+AGG - Chr1:29440164-29440183 MsG0180001925.01.T01:intron 35.0%
GTCCAGCATACATAAAACTT+GGG - Chr1:29441170-29441189 MsG0180001925.01.T01:intron 35.0%
GTCGGAGAATTAGTTAATGT+TGG - Chr1:29443635-29443654 MsG0180001925.01.T01:intron 35.0%
GTCTAGTGTCTGGAAATAAA+AGG - Chr1:29446366-29446385 MsG0180001925.01.T01:intron 35.0%
GTCTCATCATATTGTGAATC+AGG + Chr1:29443086-29443105 None:intergenic 35.0%
GTGAAAGACTTCGTTAAACT+TGG - Chr1:29445823-29445842 MsG0180001925.01.T01:intron 35.0%
GTGGATGATATTGTTTAGAC+TGG - Chr1:29444139-29444158 MsG0180001925.01.T01:intron 35.0%
GTTTACAAAACCAGCTTGTA+AGG + Chr1:29440993-29441012 None:intergenic 35.0%
TAAACCATGGTAGTCAAATC+GGG + Chr1:29443424-29443443 None:intergenic 35.0%
TACCTGTGCAATATATGGAT+AGG + Chr1:29446094-29446113 None:intergenic 35.0%
TACTGACGTAAAACAGATAG+TGG + Chr1:29442451-29442470 None:intergenic 35.0%
TAGAAGTTTCCAGTTACGTA+TGG - Chr1:29440580-29440599 MsG0180001925.01.T01:CDS 35.0%
TAGGCTAGACTTTCATTCAA+TGG - Chr1:29443115-29443134 MsG0180001925.01.T01:intron 35.0%
TAGGTACCATACCGAAAATA+GGG + Chr1:29447875-29447894 None:intergenic 35.0%
TAGTGTCTGGAAATAAAAGG+GGG - Chr1:29446369-29446388 MsG0180001925.01.T01:intron 35.0%
TATTTGGGTCCTCTAAATTC+AGG - Chr1:29444213-29444232 MsG0180001925.01.T01:intron 35.0%
TCATCAACAATGGCAAAATC+AGG + Chr1:29446069-29446088 None:intergenic 35.0%
TCTTAGCAGATTATCTTCTC+GGG - Chr1:29448248-29448267 MsG0180001925.01.T01:CDS 35.0%
TCTTTAATGTTTCACTTCCC+TGG - Chr1:29444007-29444026 MsG0180001925.01.T01:intron 35.0%
TGTGGCTAGATATTGTTCAT+CGG - Chr1:29445591-29445610 MsG0180001925.01.T01:CDS 35.0%
TGTTATCATGTGTGTTGCAT+GGG + Chr1:29440663-29440682 None:intergenic 35.0%
TTACACTAAGCAGAAGATCT+TGG - Chr1:29442472-29442491 MsG0180001925.01.T01:intron 35.0%
TTATTCATTATCCGGAACCT+TGG - Chr1:29442072-29442091 MsG0180001925.01.T01:intron 35.0%
TTATTTCAGCTGCTTGATAC+TGG - Chr1:29444418-29444437 MsG0180001925.01.T01:intron 35.0%
TTGCAATACTTGACTTTGGT+AGG - Chr1:29444497-29444516 MsG0180001925.01.T01:intron 35.0%
TTGTGCTATATATTTCACCG+TGG - Chr1:29441069-29441088 MsG0180001925.01.T01:intron 35.0%
TTGTTTAGACTGGAAAGGAT+TGG - Chr1:29444149-29444168 MsG0180001925.01.T01:intron 35.0%
TTTATCTATTTGTCTGTGGG+TGG - Chr1:29448142-29448161 MsG0180001925.01.T01:CDS 35.0%
TTTGCACAACAACATTGTGT+TGG - Chr1:29440838-29440857 MsG0180001925.01.T01:intron 35.0%
! AGAATTGCTGTCTGATGTTT+TGG - Chr1:29441600-29441619 MsG0180001925.01.T01:CDS 35.0%
! AGGGCTCATTACAATTGTTT+TGG - Chr1:29444287-29444306 MsG0180001925.01.T01:intron 35.0%
! AGTATTGCAAGTTTTCCATC+AGG + Chr1:29444487-29444506 None:intergenic 35.0%
! ATGAAGTTGATCAAGACAAC+AGG + Chr1:29445625-29445644 None:intergenic 35.0%
! CAAGGTACAATGTTACTTCT+GGG - Chr1:29447414-29447433 MsG0180001925.01.T01:intron 35.0%
! CATTCCATACTTTTGATCGT+CGG + Chr1:29445758-29445777 None:intergenic 35.0%
! CCTATTGATGATATGTGTCA+AGG - Chr1:29442895-29442914 MsG0180001925.01.T01:CDS 35.0%
! GAAGGAACCTTCACATTTTA+TGG + Chr1:29441735-29441754 None:intergenic 35.0%
! GATCTAAATTGACTCCATCT+GGG + Chr1:29445855-29445874 None:intergenic 35.0%
! GGATCATATTGCCTTTTATG+AGG - Chr1:29442832-29442851 MsG0180001925.01.T01:intron 35.0%
! GGGCTCATTACAATTGTTTT+GGG - Chr1:29444288-29444307 MsG0180001925.01.T01:intron 35.0%
! TAGCCACCATAAACTGTTTT+TGG - Chr1:29447601-29447620 MsG0180001925.01.T01:intron 35.0%
! TCAATTTTGTAACAAGCCCT+GGG + Chr1:29445735-29445754 None:intergenic 35.0%
! TCAGAATAGACATTTTGCCA+TGG + Chr1:29441807-29441826 None:intergenic 35.0%
! TCTGTGCAAGTGTTGTTATA+TGG - Chr1:29447745-29447764 MsG0180001925.01.T01:intron 35.0%
! TTGATGATATGTGTCAAGGT+TGG - Chr1:29442899-29442918 MsG0180001925.01.T01:CDS 35.0%
! TTTGAGGTGAATGATAGATC+GGG - Chr1:29440529-29440548 MsG0180001925.01.T01:CDS 35.0%
!! AAGACTTCGTGTGTTTTGTT+TGG - Chr1:29444684-29444703 MsG0180001925.01.T01:intron 35.0%
!! ACAAGAATTTAACTTGCCTG+AGG + Chr1:29442117-29442136 None:intergenic 35.0%
!! ACTGGCTTATAGCTTTAACT+TGG - Chr1:29446172-29446191 MsG0180001925.01.T01:CDS 35.0%
!! CTTACAACAGAATGGATTGA+CGG - Chr1:29443581-29443600 MsG0180001925.01.T01:intron 35.0%
!! GAAATCTTTTGTTGTACCCA+GGG - Chr1:29445716-29445735 MsG0180001925.01.T01:intron 35.0%
!! GAGATAATTGATAGCGTATG+TGG - Chr1:29444120-29444139 MsG0180001925.01.T01:intron 35.0%
!! GATCGTCCATTTGATTTGTT+GGG - Chr1:29442708-29442727 MsG0180001925.01.T01:intron 35.0%
!! GTATACTTGCTGTAAGTTCT+TGG + Chr1:29443548-29443567 None:intergenic 35.0%
!! TTGCTTTTGCATGACGATTT+TGG - Chr1:29445524-29445543 MsG0180001925.01.T01:CDS 35.0%
!!! ACAATTGTTTTGGGTTCAAG+GGG - Chr1:29444297-29444316 MsG0180001925.01.T01:intron 35.0%
!!! AGGTTTTTTTGTTCTTGGTG+GGG - Chr1:29441696-29441715 MsG0180001925.01.T01:intron 35.0%
!!! GACAATGGATTGCTAACTTT+TGG - Chr1:29443948-29443967 MsG0180001925.01.T01:intron 35.0%
!!! GAGGTTTTTTTGTTCTTGGT+GGG - Chr1:29441695-29441714 MsG0180001925.01.T01:intron 35.0%
!!! GTCACTGCAGAGTTTTTTTT+TGG + Chr1:29441528-29441547 None:intergenic 35.0%
!!! TCAACTTCATTGCTTTTTCC+TGG - Chr1:29445635-29445654 MsG0180001925.01.T01:intron 35.0%
!!! TGAGGTTTTTTTGTTCTTGG+TGG - Chr1:29441694-29441713 MsG0180001925.01.T01:intron 35.0%
AAAATGGTCTGGAAAGCTAC+CGG + Chr1:29441853-29441872 None:intergenic 40.0%
AAACATCAACTTTCAGGAGC+TGG - Chr1:29445933-29445952 MsG0180001925.01.T01:intron 40.0%
AAACTTGGTTTCATCCCAGA+TGG - Chr1:29445838-29445857 MsG0180001925.01.T01:intron 40.0%
AATCCAGTCCCTGAATTTAG+AGG + Chr1:29444225-29444244 None:intergenic 40.0%
AATTGCTCATCTCATCCATC+GGG - Chr1:29445786-29445805 MsG0180001925.01.T01:intron 40.0%
ACAGCAAGTATACATCAAGG+AGG - Chr1:29443555-29443574 MsG0180001925.01.T01:intron 40.0%
ACTCAAACCCAGAACAATGA+AGG + Chr1:29440942-29440961 None:intergenic 40.0%
AGATGTAGCTTAAAGCTCAC+GGG + Chr1:29443731-29443750 None:intergenic 40.0%
AGCATGCAATGAAAGGGTAA+AGG + Chr1:29441282-29441301 None:intergenic 40.0%
AGCCTATCCATATATTGCAC+AGG - Chr1:29446089-29446108 MsG0180001925.01.T01:intron 40.0%
AGCTTGGGCATATTACTAAC+CGG - Chr1:29446890-29446909 MsG0180001925.01.T01:intron 40.0%
AGTCATCTGCTACCTAAAAC+AGG - Chr1:29443658-29443677 MsG0180001925.01.T01:intron 40.0%
AGTTGGCCCAACAAATCAAA+TGG + Chr1:29442717-29442736 None:intergenic 40.0%
ATCTCTCGGACAGGTATATA+AGG - Chr1:29441972-29441991 MsG0180001925.01.T01:intron 40.0%
ATTTGCAGATGATGTGGCTA+TGG - Chr1:29441755-29441774 MsG0180001925.01.T01:intron 40.0%
CAATTGCTCATCTCATCCAT+CGG - Chr1:29445785-29445804 MsG0180001925.01.T01:intron 40.0%
CAGAGCAAAGAAAGCAATGT+CGG - Chr1:29443617-29443636 MsG0180001925.01.T01:intron 40.0%
CAGCAAGTATACATCAAGGA+GGG - Chr1:29443556-29443575 MsG0180001925.01.T01:intron 40.0%
CAGTTATTATCTGTTGCTGG+AGG - Chr1:29440114-29440133 MsG0180001925.01.T01:intron 40.0%
CAGTTCTTGACAATGACAGA+GGG + Chr1:29446156-29446175 None:intergenic 40.0%
CCAGAAGTAACATTGTACCT+TGG + Chr1:29447416-29447435 None:intergenic 40.0%
CCCGATAGCCCTAATTATAA+GGG + Chr1:29446016-29446035 None:intergenic 40.0%
CCCTTATAATTAGGGCTATC+GGG - Chr1:29446013-29446032 MsG0180001925.01.T01:intron 40.0%
CCTCGTCCAAAAGAAATTCT+CGG + Chr1:29447023-29447042 None:intergenic 40.0%
CCTTATAATTAGGGCTATCG+GGG - Chr1:29446014-29446033 MsG0180001925.01.T01:intron 40.0%
CTTAAACATTAGTGGCATCC+AGG + Chr1:29445656-29445675 None:intergenic 40.0%
CTTTCAAGCACTTCTTGTTC+AGG + Chr1:29446271-29446290 None:intergenic 40.0%
GAAACATATGCAGCATCTCT+CGG - Chr1:29441958-29441977 MsG0180001925.01.T01:intron 40.0%
GAGTAAACAGCATTCCACAA+TGG - Chr1:29439017-29439036 MsG0180001925.01.T01:three_prime_UTR 40.0%
GAGTGGGAATTTGTAAAGCA+TGG + Chr1:29443329-29443348 None:intergenic 40.0%
GAGTGGGGAATATAAAGCTT+GGG - Chr1:29440958-29440977 MsG0180001925.01.T01:intron 40.0%
GATCCAAGAAAAATTCGCCA+AGG - Chr1:29447396-29447415 MsG0180001925.01.T01:intron 40.0%
GATGTAATTGGATGCCTTCA+AGG - Chr1:29446397-29446416 MsG0180001925.01.T01:intron 40.0%
GCACATGCAAACAGATCATT+GGG + Chr1:29442876-29442895 None:intergenic 40.0%
GCCCTTATAATTAGGGCTAT+CGG - Chr1:29446012-29446031 MsG0180001925.01.T01:intron 40.0%
GCTCTAATTGAAGAGGAACT+TGG - Chr1:29441777-29441796 MsG0180001925.01.T01:intron 40.0%
GGACACATGGCATATATAGA+AGG + Chr1:29441306-29441325 None:intergenic 40.0%
GGGGATTCCATAAAATGTGA+AGG - Chr1:29441725-29441744 MsG0180001925.01.T01:intron 40.0%
GGTCCAGCATACATAAAACT+TGG - Chr1:29441169-29441188 MsG0180001925.01.T01:intron 40.0%
GTAACTGTCTCGAGAACAAA+AGG + Chr1:29442045-29442064 None:intergenic 40.0%
GTAGGTACCATACCGAAAAT+AGG + Chr1:29447876-29447895 None:intergenic 40.0%
GTGCAGTTATTATCTGTTGC+TGG - Chr1:29440111-29440130 MsG0180001925.01.T01:intron 40.0%
GTGGTTGTTGTAAAGAAGTG+TGG + Chr1:29438869-29438888 None:intergenic 40.0%
TAAAAGAAGTCAAGGAGGAG+AGG + Chr1:29447150-29447169 None:intergenic 40.0%
TAAGAGAGTGAGAGCTCAAA+TGG - Chr1:29439370-29439389 MsG0180001925.01.T01:CDS 40.0%
TAAGCTCATCCATACGTAAC+TGG + Chr1:29440592-29440611 None:intergenic 40.0%
TAATGATTCGCTCTTTGCTG+AGG - Chr1:29439445-29439464 MsG0180001925.01.T01:CDS 40.0%
TACCATTTGTTCCCTTGTCA+CGG + Chr1:29447817-29447836 None:intergenic 40.0%
TATGGCTGTCATATTCCTGA+AGG + Chr1:29445484-29445503 None:intergenic 40.0%
TCCTTCATTTGCAGATGATG+TGG - Chr1:29441749-29441768 MsG0180001925.01.T01:intron 40.0%
TCTAGCACCTTCATTGTTCT+GGG - Chr1:29440932-29440951 MsG0180001925.01.T01:intron 40.0%
TCTCTCGGACAGGTATATAA+GGG - Chr1:29441973-29441992 MsG0180001925.01.T01:intron 40.0%
TGACTCATGCAGATTGTCAA+GGG - Chr1:29447783-29447802 MsG0180001925.01.T01:intron 40.0%
TGAGTGGGGAATATAAAGCT+TGG - Chr1:29440957-29440976 MsG0180001925.01.T01:intron 40.0%
TGCACAGGTATAATTGTCTC+TGG - Chr1:29446104-29446123 MsG0180001925.01.T01:CDS 40.0%
TGCATTCTGAACTCCTAGTA+AGG + Chr1:29447850-29447869 None:intergenic 40.0%
TGGAAATTCCACCCTAATTG+CGG - Chr1:29440858-29440877 MsG0180001925.01.T01:intron 40.0%
TGGATAGGCTTCATCAACAA+TGG + Chr1:29446079-29446098 None:intergenic 40.0%
TGGGAATTTGTAAAGCATGG+TGG + Chr1:29443326-29443345 None:intergenic 40.0%
TGTGGAAGTTGTTGTATGTG+TGG + Chr1:29438851-29438870 None:intergenic 40.0%
TGTGGTAAAATTCCACATGG+TGG - Chr1:29447461-29447480 MsG0180001925.01.T01:intron 40.0%
TTACCGATAGAGACTCTTGA+CGG - Chr1:29446708-29446727 MsG0180001925.01.T01:intron 40.0%
TTAGACTGGAAAGGATTGGA+AGG - Chr1:29444153-29444172 MsG0180001925.01.T01:intron 40.0%
TTATCCTCTTCGGTTATGGT+GGG + Chr1:29447930-29447949 None:intergenic 40.0%
TTCACGTATTTCAATAGCCC+TGG + Chr1:29441134-29441153 None:intergenic 40.0%
TTGACCGACGATCAAAAGTA+TGG - Chr1:29445751-29445770 MsG0180001925.01.T01:intron 40.0%
TTGACTCATGCAGATTGTCA+AGG - Chr1:29447782-29447801 MsG0180001925.01.T01:intron 40.0%
TTTATCCTCTTCGGTTATGG+TGG + Chr1:29447931-29447950 None:intergenic 40.0%
! ACAATTTTGGACAGGATGCA+CGG - Chr1:29446448-29446467 MsG0180001925.01.T01:intron 40.0%
! ATATCCCGATTTGACTACCA+TGG - Chr1:29443417-29443436 MsG0180001925.01.T01:intron 40.0%
! ATTTTCGAAGAGCCAAACCA+AGG + Chr1:29442092-29442111 None:intergenic 40.0%
! ATTTTGGATTGAGGGTCTGT+TGG + Chr1:29439806-29439825 None:intergenic 40.0%
! CAATTGGCAAGTCTTATGAG+AGG - Chr1:29439404-29439423 MsG0180001925.01.T01:CDS 40.0%
! CAGAATGCAAGCCCTATTTT+CGG - Chr1:29447861-29447880 MsG0180001925.01.T01:intron 40.0%
! CCAAGGTACAATGTTACTTC+TGG - Chr1:29447413-29447432 MsG0180001925.01.T01:intron 40.0%
! CGAAGTCTTTTTCTACTTCG+TGG + Chr1:29444673-29444692 None:intergenic 40.0%
! GGATCTAAATTGACTCCATC+TGG + Chr1:29445856-29445875 None:intergenic 40.0%
! GTACCTTGGCGAATTTTTCT+TGG + Chr1:29447402-29447421 None:intergenic 40.0%
! GTCAATTTTGTAACAAGCCC+TGG + Chr1:29445736-29445755 None:intergenic 40.0%
! TCATTGTTCTGGGTTTGAGT+GGG - Chr1:29440942-29440961 MsG0180001925.01.T01:intron 40.0%
! TTCATTGTTCTGGGTTTGAG+TGG - Chr1:29440941-29440960 MsG0180001925.01.T01:intron 40.0%
! TTGCTGGAGGTTTTCTTTCT+CGG - Chr1:29440127-29440146 MsG0180001925.01.T01:intron 40.0%
!! AAGTATGGGGGTATCCTAAA+AGG + Chr1:29445991-29446010 None:intergenic 40.0%
!! AGGATAGTGGAACATTAGTG+AGG + Chr1:29443982-29444001 None:intergenic 40.0%
!! GAGAATTGGTGATGTTTCGA+AGG - Chr1:29439343-29439362 MsG0180001925.01.T01:CDS 40.0%
!! GGAAATCTTTTGTTGTACCC+AGG - Chr1:29445715-29445734 MsG0180001925.01.T01:intron 40.0%
!! GGATCGTCCATTTGATTTGT+TGG - Chr1:29442707-29442726 MsG0180001925.01.T01:intron 40.0%
!! TGCCCAAGTTTTATGTATGC+TGG + Chr1:29441175-29441194 None:intergenic 40.0%
!! TGTGGGTGGATTAAGCATTA+AGG + Chr1:29448322-29448341 None:intergenic 40.0%
!! TTGGAAGGGATAGCTTTAGT+AGG - Chr1:29446039-29446058 MsG0180001925.01.T01:intron 40.0%
!!! GGTTTTTTTGTTCTTGGTGG+GGG - Chr1:29441697-29441716 MsG0180001925.01.T01:intron 40.0%
!!! GTAAGCTCGTACTTTTTCTG+AGG - Chr1:29441676-29441695 MsG0180001925.01.T01:intron 40.0%
!!! TTTTTAGGTCTCCATTGACG+TGG - Chr1:29442270-29442289 MsG0180001925.01.T01:intron 40.0%
AAGGGGGACATCGATGTAAT+TGG - Chr1:29446385-29446404 MsG0180001925.01.T01:intron 45.0%
AATATGATCCGCACTCCTGA+TGG - Chr1:29444469-29444488 MsG0180001925.01.T01:intron 45.0%
ACCCTTAGGCGCCTTAATAT+CGG - Chr1:29440884-29440903 MsG0180001925.01.T01:intron 45.0%
ACGAAGTCTTTCACTATGGC+TGG + Chr1:29445817-29445836 None:intergenic 45.0%
AGAGAGAGAGAAGGTTTGGA+GGG + Chr1:29438893-29438912 None:intergenic 45.0%
AGAGAGAGAGAGAGAAGGTT+TGG + Chr1:29438897-29438916 None:intergenic 45.0%
AGAGGATCTGAAAGGGAGTA+TGG - Chr1:29446864-29446883 MsG0180001925.01.T01:intron 45.0%
ATAACCAGAATGAGGTTGCC+AGG - Chr1:29441113-29441132 MsG0180001925.01.T01:intron 45.0%
ATCCCTCCTCTAAACCTTGA+AGG + Chr1:29446414-29446433 None:intergenic 45.0%
ATGCCTTCAAGGTTTAGAGG+AGG - Chr1:29446408-29446427 MsG0180001925.01.T01:intron 45.0%
ATGGACGATCCATGTAAGTC+AGG + Chr1:29442698-29442717 None:intergenic 45.0%
ATTACAGCTGCTAAAAGCGG+AGG - Chr1:29446838-29446857 MsG0180001925.01.T01:intron 45.0%
CACTAAGCAGAAGATCTTGG+TGG - Chr1:29442475-29442494 MsG0180001925.01.T01:intron 45.0%
CAGAAGATCTTGGTGGAATC+TGG - Chr1:29442482-29442501 MsG0180001925.01.T01:intron 45.0%
CATCCGTCAAGAGTCTCTAT+CGG + Chr1:29446714-29446733 None:intergenic 45.0%
CATTATCCGGAACCTTGGTT+TGG - Chr1:29442077-29442096 MsG0180001925.01.T01:intron 45.0%
CCAGTTCTTGACAATGACAG+AGG + Chr1:29446157-29446176 None:intergenic 45.0%
CCCCGATAGCCCTAATTATA+AGG + Chr1:29446017-29446036 None:intergenic 45.0%
CCTCTGTCATTGTCAAGAAC+TGG - Chr1:29446154-29446173 MsG0180001925.01.T01:CDS 45.0%
CCTGAAGGAAAATGGGGATT+TGG - Chr1:29441999-29442018 MsG0180001925.01.T01:intron 45.0%
CCTTGAAGAAGAACCGTTGA+CGG + Chr1:29439193-29439212 None:intergenic 45.0%
CTAAGGGTAGACCGCAATTA+GGG + Chr1:29440872-29440891 None:intergenic 45.0%
CTAGCTGGATCATACACCAA+TGG + Chr1:29440042-29440061 None:intergenic 45.0%
CTATCAAGGACTCAAGAGCT+TGG - Chr1:29442556-29442575 MsG0180001925.01.T01:intron 45.0%
CTCTAGCACCTTCATTGTTC+TGG - Chr1:29440931-29440950 MsG0180001925.01.T01:intron 45.0%
GCAAAAGTAATGCCACCATG+TGG + Chr1:29447476-29447495 None:intergenic 45.0%
GCAAGCTGCTTAGTCTATCT+TGG + Chr1:29440203-29440222 None:intergenic 45.0%
GCCACATCATCTGCAAATGA+AGG + Chr1:29441753-29441772 None:intergenic 45.0%
GGAGGGTTCTTACAACAGAA+TGG - Chr1:29443573-29443592 MsG0180001925.01.T01:intron 45.0%
GGATGATGCTGTATCCATTG+TGG + Chr1:29439034-29439053 None:intergenic 45.0%
GGCACATGCAAACAGATCAT+TGG + Chr1:29442877-29442896 None:intergenic 45.0%
GGCTCTTCGAAAATTTCCTC+AGG - Chr1:29442098-29442117 MsG0180001925.01.T01:intron 45.0%
GTGGGATGTGGTTAACAAGA+AGG - Chr1:29440155-29440174 MsG0180001925.01.T01:intron 45.0%
GTTTACTACGAACGAGCGTA+TGG - Chr1:29447650-29447669 MsG0180001925.01.T01:intron 45.0%
TAACCAGAATGAGGTTGCCA+GGG - Chr1:29441114-29441133 MsG0180001925.01.T01:intron 45.0%
TATACCCACCATAACCGAAG+AGG - Chr1:29447923-29447942 MsG0180001925.01.T01:CDS 45.0%
TATCTTCCTAGGTATTCGGG+AGG + Chr1:29442519-29442538 None:intergenic 45.0%
TATCTTGCCAGTGCTTGCAA+AGG - Chr1:29445876-29445895 MsG0180001925.01.T01:intron 45.0%
TCAAAGACCTTTGCAAGCAC+TGG + Chr1:29445886-29445905 None:intergenic 45.0%
TCAAGAACTCCAGCACTTTC+TGG + Chr1:29447971-29447990 None:intergenic 45.0%
TCTGTCAAGCACATCTAGTC+AGG - Chr1:29448004-29448023 MsG0180001925.01.T01:intron 45.0%
TCTTCATCATTTCGGCGAAG+CGG + Chr1:29442369-29442388 None:intergenic 45.0%
TGAGGAACATTGAGAGCCTA+AGG + Chr1:29448168-29448187 None:intergenic 45.0%
TGCCTTCAAGGTTTAGAGGA+GGG - Chr1:29446409-29446428 MsG0180001925.01.T01:intron 45.0%
TGGATGCCTTCAAGGTTTAG+AGG - Chr1:29446405-29446424 MsG0180001925.01.T01:intron 45.0%
TTAAAGTGTGCGTCACACAG+AGG + Chr1:29442755-29442774 None:intergenic 45.0%
TTCGGTATGGTACCTACCAT+TGG - Chr1:29447879-29447898 MsG0180001925.01.T01:CDS 45.0%
TTGTGTAGAGAAACGGAGCA+TGG + Chr1:29443394-29443413 None:intergenic 45.0%
TTTACATGGCCTGCTCTCAA+CGG - Chr1:29442666-29442685 MsG0180001925.01.T01:intron 45.0%
TTTGTTCCTCCCGAATACCT+AGG - Chr1:29442510-29442529 MsG0180001925.01.T01:intron 45.0%
! AATCCCCATTTTCCTTCAGG+CGG + Chr1:29441999-29442018 None:intergenic 45.0%
! AATTAGGGCTATCGGGGTTT+TGG - Chr1:29446020-29446039 MsG0180001925.01.T01:intron 45.0%
! AGAAGGGAGCATGCAATGAA+AGG + Chr1:29441289-29441308 None:intergenic 45.0%
! AGTCTTATGAGAGGTCTTCG+TGG - Chr1:29439413-29439432 MsG0180001925.01.T01:CDS 45.0%
! CAAGTTTTCCATCAGGAGTG+CGG + Chr1:29444480-29444499 None:intergenic 45.0%
! CAATTTTGGACAGGATGCAC+GGG - Chr1:29446449-29446468 MsG0180001925.01.T01:intron 45.0%
! CATTGTTCTGGGTTTGAGTG+GGG - Chr1:29440943-29440962 MsG0180001925.01.T01:intron 45.0%
! CCAAATCCCCATTTTCCTTC+AGG + Chr1:29442002-29442021 None:intergenic 45.0%
! CCGAGAATTTCTTTTGGACG+AGG - Chr1:29447020-29447039 MsG0180001925.01.T01:intron 45.0%
! GAACAATGTCCAGAAAGTGC+TGG - Chr1:29447959-29447978 MsG0180001925.01.T01:CDS 45.0%
! GAAGGGAGCATGCAATGAAA+GGG + Chr1:29441288-29441307 None:intergenic 45.0%
! GTTGTTGAGGTGTTACAGAC+TGG + Chr1:29446939-29446958 None:intergenic 45.0%
! TGCAAGCCCTATTTTCGGTA+TGG - Chr1:29447866-29447885 MsG0180001925.01.T01:intron 45.0%
! TGCTGGAGGTTTTCTTTCTC+GGG - Chr1:29440128-29440147 MsG0180001925.01.T01:intron 45.0%
! TGTTCAGCTACGTCTTGTTG+AGG - Chr1:29439472-29439491 MsG0180001925.01.T01:CDS 45.0%
! TTTTCATGCTGATCCTCACC+CGG - Chr1:29444444-29444463 MsG0180001925.01.T01:intron 45.0%
!! CAACCCAAGTGCCGATATTA+AGG + Chr1:29440898-29440917 None:intergenic 45.0%
!! CAGAACAATGAAGGTGCTAG+AGG + Chr1:29440933-29440952 None:intergenic 45.0%
!! GAAAGTATTGGACTCACCTG+TGG + Chr1:29442400-29442419 None:intergenic 45.0%
!! GGCTATGGCTCTAATTGAAG+AGG - Chr1:29441770-29441789 MsG0180001925.01.T01:intron 45.0%
!! GTCTTTGACCAGGCTTTAGA+AGG - Chr1:29445898-29445917 MsG0180001925.01.T01:intron 45.0%
!! TATGGTGGGTATAAGAGCTG+CGG + Chr1:29447916-29447935 None:intergenic 45.0%
!! TTTGACCAGGCTTTAGAAGG+TGG - Chr1:29445901-29445920 MsG0180001925.01.T01:intron 45.0%
!! TTTGCAAGCACTGGCAAGAT+AGG + Chr1:29445877-29445896 None:intergenic 45.0%
!! TTTTCTTTCTCGGGTTGCGT+GGG - Chr1:29440137-29440156 MsG0180001925.01.T01:intron 45.0%
!!! GTGGGCTGCTAGATTTTTTG+AGG - Chr1:29442309-29442328 MsG0180001925.01.T01:intron 45.0%
!! ACAAATTATTTAAAAATTTA+GGG + Chr1:29444194-29444213 None:intergenic 5.0%
!! TAAAATAAAAAATTAATTCA+AGG + Chr1:29444396-29444415 None:intergenic 5.0%
!! TACAAATTATTTAAAAATTT+AGG + Chr1:29444195-29444214 None:intergenic 5.0%
!! TATATGTTAATTTATTAATA+TGG - Chr1:29442156-29442175 MsG0180001925.01.T01:intron 5.0%
!! TATATTATATTTATATATAC+TGG + Chr1:29448381-29448400 None:intergenic 5.0%
!!! AAAATTATTTTAAATTTTCT+TGG - Chr1:29445260-29445279 MsG0180001925.01.T01:intron 5.0%
!!! ATTTTTAAATAATTTGTATT+TGG - Chr1:29444197-29444216 MsG0180001925.01.T01:intron 5.0%
!!! TTTTTAAATAATTTGTATTT+GGG - Chr1:29444198-29444217 MsG0180001925.01.T01:intron 5.0%
AAACCTGTCAACGGTGTCTC+TGG - Chr1:29439225-29439244 MsG0180001925.01.T01:intron 50.0%
AACCAACCCAACCACGTCAA+TGG + Chr1:29442284-29442303 None:intergenic 50.0%
AACCTGTCAACGGTGTCTCT+GGG - Chr1:29439226-29439245 MsG0180001925.01.T01:intron 50.0%
AACGGAGCATGGAGAAACAG+AGG + Chr1:29443383-29443402 None:intergenic 50.0%
AAGAGGAACTTGGTCAGCCA+TGG - Chr1:29441787-29441806 MsG0180001925.01.T01:intron 50.0%
ACGGAGCATGGAGAAACAGA+GGG + Chr1:29443382-29443401 None:intergenic 50.0%
AGAACTTCTGCCAGTGTTGC+CGG - Chr1:29448197-29448216 MsG0180001925.01.T01:CDS 50.0%
AGAGACACCGTTGACAGGTT+TGG + Chr1:29439226-29439245 None:intergenic 50.0%
AGCACTTTAGCAGAGATGCC+CGG + Chr1:29448219-29448238 None:intergenic 50.0%
AGGTCTCCATTGACGTGGTT+GGG - Chr1:29442275-29442294 MsG0180001925.01.T01:intron 50.0%
ATATGCAGCATCTCTCGGAC+AGG - Chr1:29441963-29441982 MsG0180001925.01.T01:intron 50.0%
ATTTGTCTGTGGGTGGCCTT+AGG - Chr1:29448149-29448168 MsG0180001925.01.T01:CDS 50.0%
CCGGCAAGAGATATTCTGAC+CGG + Chr1:29446912-29446931 None:intergenic 50.0%
CCGGTCAGAATATCTCTTGC+CGG - Chr1:29446909-29446928 MsG0180001925.01.T01:intron 50.0%
CCGTCAACGGTTCTTCTTCA+AGG - Chr1:29439190-29439209 MsG0180001925.01.T01:intron 50.0%
CCTAAGGGTAGACCGCAATT+AGG + Chr1:29440873-29440892 None:intergenic 50.0%
CCTAATTGCGGTCTACCCTT+AGG - Chr1:29440870-29440889 MsG0180001925.01.T01:intron 50.0%
CGGACAAGTCCTGACTTACA+TGG - Chr1:29442686-29442705 MsG0180001925.01.T01:intron 50.0%
CGGTCAGAATATCTCTTGCC+GGG - Chr1:29446910-29446929 MsG0180001925.01.T01:intron 50.0%
CTATGGCTGGATAATCCCGA+TGG + Chr1:29445804-29445823 None:intergenic 50.0%
CTGCACAATGCGAGTTGCAA+CGG + Chr1:29440097-29440116 None:intergenic 50.0%
CTTGACGTGGTGGTCATTGT+CGG - Chr1:29440230-29440249 MsG0180001925.01.T01:intron 50.0%
GAAGAGCCAAACCAAGGTTC+CGG + Chr1:29442086-29442105 None:intergenic 50.0%
GAGAGAGAGAGAAGGTTTGG+AGG + Chr1:29438894-29438913 None:intergenic 50.0%
GAGAGAGAGAGAGAGAGAGA+AGG + Chr1:29438902-29438921 None:intergenic 50.0%
GAGGTGGAGAGGATCTGAAA+GGG - Chr1:29446857-29446876 MsG0180001925.01.T01:intron 50.0%
GATGAAGAAAGACCTGCCAC+AGG - Chr1:29442381-29442400 MsG0180001925.01.T01:intron 50.0%
GATTCCGCGGTAGATGAGTT+GGG + Chr1:29439055-29439074 None:intergenic 50.0%
GCAACACTGGCAGAAGTTCT+TGG + Chr1:29448197-29448216 None:intergenic 50.0%
GCAGTTCTCACCTTACAAGC+TGG - Chr1:29440980-29440999 MsG0180001925.01.T01:intron 50.0%
GCGCCTTAATATCGGCACTT+GGG - Chr1:29440892-29440911 MsG0180001925.01.T01:intron 50.0%
GCTGCAGGTGACAGTATATC+AGG + Chr1:29441214-29441233 None:intergenic 50.0%
GCTTGCAAAGGTCTTTGACC+AGG - Chr1:29445888-29445907 MsG0180001925.01.T01:intron 50.0%
GGACGTGTGGGAAGTTGTAA+AGG + Chr1:29443305-29443324 None:intergenic 50.0%
GGTCCTCTAAATTCAGGGAC+TGG - Chr1:29444219-29444238 MsG0180001925.01.T01:intron 50.0%
GGTGCTAGAGGATGCAATGA+AGG + Chr1:29440921-29440940 None:intergenic 50.0%
TAGGTCTCCATTGACGTGGT+TGG - Chr1:29442274-29442293 MsG0180001925.01.T01:intron 50.0%
TCATCCCAACTCATCTACCG+CGG - Chr1:29439048-29439067 MsG0180001925.01.T01:exon 50.0%
TGAAGAAGAACCGTTGACGG+TGG + Chr1:29439190-29439209 None:intergenic 50.0%
TGCAACTCTGTCATTGCTGC+AGG + Chr1:29441229-29441248 None:intergenic 50.0%
TGCCGTGACAAGGGAACAAA+TGG - Chr1:29447812-29447831 MsG0180001925.01.T01:intron 50.0%
TTTCATGCTGATCCTCACCC+GGG - Chr1:29444445-29444464 MsG0180001925.01.T01:intron 50.0%
! AAAGGGAGTATGGCTGAGCT+TGG - Chr1:29446874-29446893 MsG0180001925.01.T01:intron 50.0%
! AAGGGAGTATGGCTGAGCTT+GGG - Chr1:29446875-29446894 MsG0180001925.01.T01:intron 50.0%
! ATAGATCGGGTTGCGTACAC+AGG - Chr1:29440542-29440561 MsG0180001925.01.T01:CDS 50.0%
! GCCGATATTAAGGCGCCTAA+GGG + Chr1:29440888-29440907 None:intergenic 50.0%
! GGAGTAAAGGATCGATTCCG+CGG + Chr1:29439068-29439087 None:intergenic 50.0%
! GGCTTAAAGCGTCCAATGGT+AGG + Chr1:29447894-29447913 None:intergenic 50.0%
! GGTGTTACAGACTGGAATCC+CGG + Chr1:29446931-29446950 None:intergenic 50.0%
! GTAAAGCACTCCTTAGCCGA+GGG + Chr1:29446741-29446760 None:intergenic 50.0%
! TAAAGCACTCCTTAGCCGAG+GGG + Chr1:29446740-29446759 None:intergenic 50.0%
! TCTTGACGGATGAATCCCCT+CGG - Chr1:29446722-29446741 MsG0180001925.01.T01:intron 50.0%
! TGCCGATATTAAGGCGCCTA+AGG + Chr1:29440889-29440908 None:intergenic 50.0%
! TTTGTTCTTGGTGGGGGTGT+GGG - Chr1:29441703-29441722 MsG0180001925.01.T01:intron 50.0%
! TTTTGTTCTTGGTGGGGGTG+TGG - Chr1:29441702-29441721 MsG0180001925.01.T01:intron 50.0%
!! ACCAGGCTTTAGAAGGTGGA+GGG - Chr1:29445905-29445924 MsG0180001925.01.T01:intron 50.0%
!! ATGGTGGGTATAAGAGCTGC+GGG + Chr1:29447915-29447934 None:intergenic 50.0%
!! GTAAAGCATGGTGGACGTGT+GGG + Chr1:29443317-29443336 None:intergenic 50.0%
!! GTTTTCTTTCTCGGGTTGCG+TGG - Chr1:29440136-29440155 MsG0180001925.01.T01:intron 50.0%
!! TGTAAAGCATGGTGGACGTG+TGG + Chr1:29443318-29443337 None:intergenic 50.0%
AACCGCAGCCAGTGGAAACA+CGG - Chr1:29446956-29446975 MsG0180001925.01.T01:intron 55.0%
AAGGGCCGCCTGAAGGAAAA+TGG - Chr1:29441991-29442010 MsG0180001925.01.T01:intron 55.0%
ACACCGTTGACAGGTTTGGC+AGG + Chr1:29439222-29439241 None:intergenic 55.0%
ACAGCTGCTAAAAGCGGAGG+TGG - Chr1:29446841-29446860 MsG0180001925.01.T01:intron 55.0%
ACCTGTCAACGGTGTCTCTG+GGG - Chr1:29439227-29439246 MsG0180001925.01.T01:intron 55.0%
AGGACTTGTCCGTTGAGAGC+AGG + Chr1:29442678-29442697 None:intergenic 55.0%
AGGGCCGCCTGAAGGAAAAT+GGG - Chr1:29441992-29442011 MsG0180001925.01.T01:intron 55.0%
AGGGTAGACCGCAATTAGGG+TGG + Chr1:29440869-29440888 None:intergenic 55.0%
ATGGTCTGGAAAGCTACCGG+CGG + Chr1:29441850-29441869 None:intergenic 55.0%
CGATTCCGCGGTAGATGAGT+TGG + Chr1:29439056-29439075 None:intergenic 55.0%
CGGAGATACGGTTAGAACGC+CGG + Chr1:29439134-29439153 None:intergenic 55.0%
CTCCATTGACGTGGTTGGGT+TGG - Chr1:29442279-29442298 MsG0180001925.01.T01:intron 55.0%
CTTAAGCGCCATAGGCAGCA+TGG + Chr1:29447556-29447575 None:intergenic 55.0%
GAACTTCTGCCAGTGTTGCC+GGG - Chr1:29448198-29448217 MsG0180001925.01.T01:CDS 55.0%
GAATGGGACGAGCGGAGTAA+AGG + Chr1:29439081-29439100 None:intergenic 55.0%
GACAGGATGCACGGGAGAAA+TGG - Chr1:29446457-29446476 MsG0180001925.01.T01:intron 55.0%
GAGAGAAGGTTTGGAGGGAG+TGG + Chr1:29438888-29438907 None:intergenic 55.0%
GAGTGCGGATCATATTCCCC+GGG + Chr1:29444465-29444484 None:intergenic 55.0%
GCTTGCGTGCATTCTTGACG+TGG - Chr1:29440217-29440236 MsG0180001925.01.T01:intron 55.0%
GGAGGTGGAGAGGATCTGAA+AGG - Chr1:29446856-29446875 MsG0180001925.01.T01:intron 55.0%
GGAGTGCGGATCATATTCCC+CGG + Chr1:29444466-29444485 None:intergenic 55.0%
GGCGCCTTAATATCGGCACT+TGG - Chr1:29440891-29440910 MsG0180001925.01.T01:intron 55.0%
GGTATATAAGGGCCGCCTGA+AGG - Chr1:29441984-29442003 MsG0180001925.01.T01:intron 55.0%
GTATTGGACTCACCTGTGGC+AGG + Chr1:29442396-29442415 None:intergenic 55.0%
GTGCTGGAGTTCTTGACTGC+AGG - Chr1:29447975-29447994 MsG0180001925.01.T01:CDS 55.0%
GTGGTGACAGGAGCAGGTTT+AGG + Chr1:29439171-29439190 None:intergenic 55.0%
GTGTGGTGCGAAGTGTGACA+AGG + Chr1:29438834-29438853 None:intergenic 55.0%
GTTGTTGTGGCGGTGGGAAT+GGG + Chr1:29439097-29439116 None:intergenic 55.0%
TAGCCCTGGCAACCTCATTC+TGG + Chr1:29441120-29441139 None:intergenic 55.0%
TGCGTGCATTCTTGACGTGG+TGG - Chr1:29440220-29440239 MsG0180001925.01.T01:intron 55.0%
TGCTAAAAGCGGAGGTGGAG+AGG - Chr1:29446846-29446865 MsG0180001925.01.T01:intron 55.0%
TTCATGCTGATCCTCACCCG+GGG - Chr1:29444446-29444465 MsG0180001925.01.T01:intron 55.0%
! AGGAGCAGGTTTAGGATCCG+TGG + Chr1:29439163-29439182 None:intergenic 55.0%
! CGTAAAGCACTCCTTAGCCG+AGG + Chr1:29446742-29446761 None:intergenic 55.0%
! TGCGGGCTTAAAGCGTCCAA+TGG + Chr1:29447898-29447917 None:intergenic 55.0%
! TTGTTCTTGGTGGGGGTGTG+GGG - Chr1:29441704-29441723 MsG0180001925.01.T01:intron 55.0%
! TTTAGGATCCGTGGCGACAG+CGG + Chr1:29439154-29439173 None:intergenic 55.0%
!! AGGGCATTGATGCCGTGACA+AGG - Chr1:29447802-29447821 MsG0180001925.01.T01:intron 55.0%
!! CCAGGCTTTAGAAGGTGGAG+GGG - Chr1:29445906-29445925 MsG0180001925.01.T01:intron 55.0%
!! GACCAGGCTTTAGAAGGTGG+AGG - Chr1:29445904-29445923 MsG0180001925.01.T01:intron 55.0%
!! GGGCATTGATGCCGTGACAA+GGG - Chr1:29447803-29447822 MsG0180001925.01.T01:intron 55.0%
!! GGTTGGGTTGGTTGACGAGT+GGG - Chr1:29442291-29442310 MsG0180001925.01.T01:intron 55.0%
!! TGGTTGGGTTGGTTGACGAG+TGG - Chr1:29442290-29442309 MsG0180001925.01.T01:intron 55.0%
!!! AGGGCTATCGGGGTTTTGGA+AGG - Chr1:29446024-29446043 MsG0180001925.01.T01:intron 55.0%
!!! GGGCTATCGGGGTTTTGGAA+GGG - Chr1:29446025-29446044 MsG0180001925.01.T01:intron 55.0%
ACCCCAGAGACACCGTTGAC+AGG + Chr1:29439231-29439250 None:intergenic 60.0%
ACCGCAGCCAGTGGAAACAC+GGG - Chr1:29446957-29446976 MsG0180001925.01.T01:intron 60.0%
ACCTCAACAACCGCAGCCAG+TGG - Chr1:29446948-29446967 MsG0180001925.01.T01:intron 60.0%
AGGGAGGTTGTTGTGGCGGT+GGG + Chr1:29439103-29439122 None:intergenic 60.0%
ATGCGAGTTGCAACGGAGCG+AGG + Chr1:29440090-29440109 None:intergenic 60.0%
CCGCCTGCCAAACCTGTCAA+CGG - Chr1:29439216-29439235 MsG0180001925.01.T01:intron 60.0%
CCGTTGACAGGTTTGGCAGG+CGG + Chr1:29439219-29439238 None:intergenic 60.0%
CGGATCATATTCCCCGGGTG+AGG + Chr1:29444460-29444479 None:intergenic 60.0%
CGGATGAATCCCCTCGGCTA+AGG - Chr1:29446728-29446747 MsG0180001925.01.T01:intron 60.0%
GAACCGTTGACGGTGGTGAC+AGG + Chr1:29439183-29439202 None:intergenic 60.0%
GACGGAGAGGGAGGTTGTTG+TGG + Chr1:29439110-29439129 None:intergenic 60.0%
GACGTGGTGGTCATTGTCGG+TGG - Chr1:29440233-29440252 MsG0180001925.01.T01:intron 60.0%
GCTCCTGTCACCACCGTCAA+CGG - Chr1:29439177-29439196 MsG0180001925.01.T01:intron 60.0%
GGAAAGCTACCGGCGGCAAT+GGG + Chr1:29441843-29441862 None:intergenic 60.0%
GGAGAGGGAGGTTGTTGTGG+CGG + Chr1:29439107-29439126 None:intergenic 60.0%
GGCTACTGCCATGCTGCCTA+TGG - Chr1:29447545-29447564 MsG0180001925.01.T01:intron 60.0%
GGGCCGCCTGAAGGAAAATG+GGG - Chr1:29441993-29442012 MsG0180001925.01.T01:intron 60.0%
GGTTGTTGTGGCGGTGGGAA+TGG + Chr1:29439098-29439117 None:intergenic 60.0%
TACGGTTAGAACGCCGGCGA+CGG + Chr1:29439128-29439147 None:intergenic 60.0%
TCAACCTCTCCCATTGCCGC+CGG - Chr1:29441831-29441850 MsG0180001925.01.T01:intron 60.0%
TGGAAAGCTACCGGCGGCAA+TGG + Chr1:29441844-29441863 None:intergenic 60.0%
TTGACGGTGGTGACAGGAGC+AGG + Chr1:29439177-29439196 None:intergenic 60.0%
! TCCACTGGCTGCGGTTGTTG+AGG + Chr1:29446952-29446971 None:intergenic 60.0%
! TGTTCTTGGTGGGGGTGTGG+GGG - Chr1:29441705-29441724 MsG0180001925.01.T01:intron 60.0%
! TTCTCGGGTTGCGTGGGATG+TGG - Chr1:29440143-29440162 MsG0180001925.01.T01:intron 60.0%
!! CCCCTCCACCTTCTAAAGCC+TGG + Chr1:29445909-29445928 None:intergenic 60.0%
ACAACCTCCCTCTCCGTCGC+CGG - Chr1:29439112-29439131 MsG0180001925.01.T01:CDS 65.0%
CCGTATCTCCGCTGTCGCCA+CGG - Chr1:29439143-29439162 MsG0180001925.01.T01:CDS 65.0%
CCGTGGCGACAGCGGAGATA+CGG + Chr1:29439146-29439165 None:intergenic 65.0%
GAGGGAGGTTGTTGTGGCGG+TGG + Chr1:29439104-29439123 None:intergenic 65.0%
GCAGAGATGCCCGGCAACAC+TGG + Chr1:29448210-29448229 None:intergenic 65.0%
GCAGCCAGTGGAAACACGGG+CGG - Chr1:29446960-29446979 MsG0180001925.01.T01:intron 65.0%
TAGAACGCCGGCGACGGAGA+GGG + Chr1:29439122-29439141 None:intergenic 65.0%
TTAGAACGCCGGCGACGGAG+AGG + Chr1:29439123-29439142 None:intergenic 65.0%
! GCCCGTGTTTCCACTGGCTG+CGG + Chr1:29446961-29446980 None:intergenic 65.0%
! GTTCTTGGTGGGGGTGTGGG+GGG - Chr1:29441706-29441725 MsG0180001925.01.T01:intron 65.0%
AGGGCCGCCCGTGTTTCCAC+TGG + Chr1:29446967-29446986 None:intergenic 70.0%
GCTACCGGCGGCAATGGGAG+AGG + Chr1:29441838-29441857 None:intergenic 70.0%
GGCGGTGGGAATGGGACGAG+CGG + Chr1:29439089-29439108 None:intergenic 70.0%
AACGCCGGCGACGGAGAGGG+AGG + Chr1:29439119-29439138 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr1 gene 29438807 29448559 29438807 ID=MsG0180001925.01;Name=MsG0180001925.01
Chr1 mRNA 29438807 29448559 29438807 ID=MsG0180001925.01.T01;Parent=MsG0180001925.01;Name=MsG0180001925.01.T01;_AED=0.48;_eAED=0.48;_QI=229|0.81|0.91|1|1|1|12|254|716
Chr1 exon 29438807 29439195 29438807 ID=MsG0180001925.01.T01:exon:42251;Parent=MsG0180001925.01.T01
Chr1 exon 29439341 29439571 29439341 ID=MsG0180001925.01.T01:exon:42250;Parent=MsG0180001925.01.T01
Chr1 exon 29440325 29440648 29440325 ID=MsG0180001925.01.T01:exon:42249;Parent=MsG0180001925.01.T01
Chr1 exon 29441256 29441629 29441256 ID=MsG0180001925.01.T01:exon:42248;Parent=MsG0180001925.01.T01
Chr1 exon 29442852 29442939 29442852 ID=MsG0180001925.01.T01:exon:42247;Parent=MsG0180001925.01.T01
Chr1 exon 29444964 29445089 29444964 ID=MsG0180001925.01.T01:exon:42246;Parent=MsG0180001925.01.T01
Chr1 exon 29445307 29445395 29445307 ID=MsG0180001925.01.T01:exon:42245;Parent=MsG0180001925.01.T01
Chr1 exon 29445514 29445619 29445514 ID=MsG0180001925.01.T01:exon:42244;Parent=MsG0180001925.01.T01
Chr1 exon 29446102 29446245 29446102 ID=MsG0180001925.01.T01:exon:42243;Parent=MsG0180001925.01.T01
Chr1 exon 29447181 29447351 29447181 ID=MsG0180001925.01.T01:exon:42242;Parent=MsG0180001925.01.T01
Chr1 exon 29447873 29448022 29447873 ID=MsG0180001925.01.T01:exon:42241;Parent=MsG0180001925.01.T01
Chr1 exon 29448118 29448559 29448118 ID=MsG0180001925.01.T01:exon:42240;Parent=MsG0180001925.01.T01
Chr1 five_prime_UTR 29448331 29448559 29448331 ID=MsG0180001925.01.T01:five_prime_utr;Parent=MsG0180001925.01.T01
Chr1 CDS 29448118 29448330 29448118 ID=MsG0180001925.01.T01:cds;Parent=MsG0180001925.01.T01
Chr1 CDS 29447873 29448022 29447873 ID=MsG0180001925.01.T01:cds;Parent=MsG0180001925.01.T01
Chr1 CDS 29447181 29447351 29447181 ID=MsG0180001925.01.T01:cds;Parent=MsG0180001925.01.T01
Chr1 CDS 29446102 29446245 29446102 ID=MsG0180001925.01.T01:cds;Parent=MsG0180001925.01.T01
Chr1 CDS 29445514 29445619 29445514 ID=MsG0180001925.01.T01:cds;Parent=MsG0180001925.01.T01
Chr1 CDS 29445307 29445395 29445307 ID=MsG0180001925.01.T01:cds;Parent=MsG0180001925.01.T01
Chr1 CDS 29444964 29445089 29444964 ID=MsG0180001925.01.T01:cds;Parent=MsG0180001925.01.T01
Chr1 CDS 29442852 29442939 29442852 ID=MsG0180001925.01.T01:cds;Parent=MsG0180001925.01.T01
Chr1 CDS 29441256 29441629 29441256 ID=MsG0180001925.01.T01:cds;Parent=MsG0180001925.01.T01
Chr1 CDS 29440325 29440648 29440325 ID=MsG0180001925.01.T01:cds;Parent=MsG0180001925.01.T01
Chr1 CDS 29439341 29439571 29439341 ID=MsG0180001925.01.T01:cds;Parent=MsG0180001925.01.T01
Chr1 CDS 29439061 29439195 29439061 ID=MsG0180001925.01.T01:cds;Parent=MsG0180001925.01.T01
Chr1 three_prime_UTR 29438807 29439060 29438807 ID=MsG0180001925.01.T01:three_prime_utr;Parent=MsG0180001925.01.T01
Gene Sequence

>MsG0180001925.01.T01

ATGGATACAGCATCATCCCAACTCATCTACCGCGGAATCGATCCTTTACTCCGCTCGTCCCATTCCCACCGCCACAACAACCTCCCTCTCCGTCGCCGGCGTTCTAACCGTATCTCCGCTGTCGCCACGGATCCTAAACCTGCTCCTGTCACCACCGTCAACGGTTCTTCTTCAAGGTCTCCGCCTGCCAAACCTGTCAACGGTGTCTCTGGGAGAATTGGTGATGTTTCGAAGGAGATTAAGAGAGTGAGAGCTCAAATGGAAGAAGATGAACAATTGGCAAGTCTTATGAGAGGTCTTCGTGGTCAGAGTCTTAATGATTCGCTCTTTGCTGAGGATGATGTTCAGCTACGTCTTGTTGAGGTAGATGAAAGTAGTGAATTTCTACCATTGGTGTATGATCCAGCTAGTATTACTGCATATTGGGGTAAACGTCCTCGCTCCGTTGCAACTCGCATTGTGCAGTTATTATCTGTTGCTGGAGGTTTTCTTTCTCGGGTTGCGTGGGATGTGGTTAACAAGAAGGTTAAAGAGAATGAGGTTGCCAGGGCTATTGAAATACGTGAAATTGTGACATCTTTGGGTCCAGCATACATAAAACTTGGGCAAGCATTGAGCATACGACCTGATATACTGTCACCTGCAGCAATGACAGAGTTGCAGAAGCTCTGTGATAAAGTTCCTTCATTTGCAGATGATGTGGCTATGGCTCTAATTGAAGAGGAACTTGGTCAGCCATGGCAAAATGTCTATTCTGAATTATCAACCTCTCCCATTGCCGCCGCATCTCTCGGACAGGTATATAAGGGCCGCCTGAAGGAAAATGGGGATTTGGTTGCTGTTAAAGTGCAAAGACCTTTTGTTCTCGAGACAGTCTCCATTGACGTGGTTGGGTTGGTTGACGAGTGGGCTGCTAGATTTTTTGAGGAGTTAGACTATGTGAATGAAGGTGAAAATGGAGACCGCTTCGCCGAAATGATGAAGAAAGACCTGCCACAGCTGCTTGATACTGGCTTTTTTCATGCTGATCCTCACCCGGGGAATATGATCCGCACTCCTGATGGAAAACTTGCAATACTTGACTTTGGGCTTGTTACAAAATTGACCGACGATCAAAAGTATGGAATGATTGAAGCAATTGCTCATCTCATCCATCGGGATTATCCAGCCATAGTGAAAGACTTCGTTAAACTTGGTTTCATCCCAGATGGAGTCAATTTAGATCCTATCTTGCCAGTGCTTGCAAAGGTCTTTGACCAGGCTTTAGAAGGTGGAGGGGCAAAAAACATCAACTTTCAGGAGCTGGCATCAGATTTAGCACAAATTACCTTTGATTATCCTTTTAGGATACCCCCATACTTTGCCCTTATAATTAGGGCTATCGGGGTTTTGGAAGGGATAGCTTTAGTAGGAAATCCTGATTTTGCCATTGTTGATGAAGCCTATCCATATATTGCACAGAGACTCTTGACGGATGAATCCCCTCGGCTAAGGAGTGCTTTACGTTACACTATATATGGGAAATCTGGAGTTTTCGATGCTGAAAGATTTATTGATGTCATGCAAGCCTTTGAGAATTTTATTACAGCTGCTAAAAGCGGAGGTGGAGAGGATCTGAAAGGGAGTATGGCTGAGCTTGGGCATATTACTAACCGGTCAGAATATCTCTTGCCGGGATTCCAGTCTGTAACACCTCAACAACCGCAGCCAGTGGAAACACGGGCGGCCCTAGCATTTTTACTGTCTGATAAGGGGAATTTTTTCCGAGAATTTCTTTTGGACGAGATTGTCAAGGGCATTGATGCCGTGACAAGGGAACAAATGGTAAGAATTATGTCCTTACTAGGAGTTCAGAATGCAAGCCCTATTTTCGGTATGGTACCTACCATTGGACGCTTTAAGCCCGCAGCTCTTATACCCACCATAACCGAAGAGGATAAAGTTATACTGAACAATGTCCAGAAAGTGCTGGAGTTCTTGACTGCAGGAAGCACTCTGTCAAGCACATCTAGTCAGGCTCTCAATGTTCCTCAGATTATCCAAGAACTTCTGCCAGTGTTGCCGGGCATCTCTGCTAAAGTGCTTCCTGATGTTCTTAGCAGATTATCTTCTCGGGTATTAGCGCGATTAATTCGTGATGCATTTTTGTAA

Protein sequence

>MsG0180001925.01.T01

MDTASSQLIYRGIDPLLRSSHSHRHNNLPLRRRRSNRISAVATDPKPAPVTTVNGSSSRSPPAKPVNGVSGRIGDVSKEIKRVRAQMEEDEQLASLMRGLRGQSLNDSLFAEDDVQLRLVEVDESSEFLPLVYDPASITAYWGKRPRSVATRIVQLLSVAGGFLSRVAWDVVNKKVKENEVARAIEIREIVTSLGPAYIKLGQALSIRPDILSPAAMTELQKLCDKVPSFADDVAMALIEEELGQPWQNVYSELSTSPIAAASLGQVYKGRLKENGDLVAVKVQRPFVLETVSIDVVGLVDEWAARFFEELDYVNEGENGDRFAEMMKKDLPQLLDTGFFHADPHPGNMIRTPDGKLAILDFGLVTKLTDDQKYGMIEAIAHLIHRDYPAIVKDFVKLGFIPDGVNLDPILPVLAKVFDQALEGGGAKNINFQELASDLAQITFDYPFRIPPYFALIIRAIGVLEGIALVGNPDFAIVDEAYPYIAQRLLTDESPRLRSALRYTIYGKSGVFDAERFIDVMQAFENFITAAKSGGGEDLKGSMAELGHITNRSEYLLPGFQSVTPQQPQPVETRAALAFLLSDKGNFFREFLLDEIVKGIDAVTREQMVRIMSLLGVQNASPIFGMVPTIGRFKPAALIPTITEEDKVILNNVQKVLEFLTAGSTLSSTSSQALNVPQIIQELLPVLPGISAKVLPDVLSRLSSRVLARLIRDAFL*