AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280011089.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280011089.01.T01 MTR_2g098490 89.373 367 14 2 228 594 1 342 0.0 671
MsG0280011089.01.T01 MTR_4g066130 73.842 367 70 3 228 594 1 341 0.0 570
MsG0280011089.01.T01 MTR_2g098500 67.192 317 8 4 1 222 1 316 4.02e-130 386
MsG0280011089.01.T01 MTR_8g016390 98.182 55 1 0 168 222 1 55 2.65e-31 118
MsG0280011089.01.T01 MTR_8g016390 98.182 55 1 0 168 222 1 55 5.79e-31 117
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280011089.01.T01 AT3G20790 45.659 311 71 6 6 220 9 317 4.05e-72 236

Find 114 sgRNAs with CRISPR-Local

Find 577 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCTCCTCTATTGATCTTTC+AGG 0.103045 2:+79408391 None:intergenic
TGGAAACTCCTTTGATATTA+AGG 0.213054 2:-79406747 MsG0280011089.01.T01:CDS
ATTCCAATTCTGGTGTTTAA+TGG 0.213810 2:+79408343 None:intergenic
TAACCATATGCAACAGAATT+AGG 0.245832 2:+79407409 None:intergenic
GGGAGGTTTCATTCTTGATA+TGG 0.259648 2:-79413625 MsG0280011089.01.T01:CDS
AACCGCTGTTCTTGTCGTTT+TGG 0.265232 2:-79416967 MsG0280011089.01.T01:CDS
TACTCCACTGAAAGGGAAAA+AGG 0.284785 2:+79412411 None:intergenic
GTGAAGAATTCCAGTCGTTT+TGG 0.291088 2:-79407505 MsG0280011089.01.T01:CDS
GGTAACTTTCCACTAAAATA+TGG 0.293727 2:-79407124 MsG0280011089.01.T01:CDS
CCAATACAGATCGCGATTCT+AGG 0.299863 2:-79417188 MsG0280011089.01.T01:CDS
GGAAATGTGGAATCTAAATT+TGG 0.301322 2:-79417029 MsG0280011089.01.T01:CDS
CATCAGCAACTTTAATATCT+TGG 0.309482 2:+79407678 None:intergenic
GTGTTACAGTGAAGCTTTGT+AGG 0.320600 2:+79407247 None:intergenic
TTGCCATTAAACACCAGAAT+TGG 0.323613 2:-79408346 MsG0280011089.01.T01:CDS
ATATTCTTGTTCTGGTCATA+TGG 0.328739 2:-79406767 MsG0280011089.01.T01:CDS
TGCATTTCATTGCAGGGTTA+AGG 0.331258 2:-79413599 MsG0280011089.01.T01:CDS
ATACTGATATATTCTTGTTC+TGG 0.331884 2:-79406775 MsG0280011089.01.T01:CDS
GCATATGGTTACACAGCTTC+AGG 0.337132 2:-79407397 MsG0280011089.01.T01:CDS
TCAGTAAGCTAGTACAGAAT+TGG 0.359875 2:-79417248 MsG0280011089.01.T01:five_prime_UTR
ATGGGTGTGCATTTCATTGC+AGG 0.364601 2:-79413606 MsG0280011089.01.T01:CDS
GTTCCTAATTCTGTTGCATA+TGG 0.366066 2:-79407412 MsG0280011089.01.T01:CDS
TGATCTGGGAGGGCAAGTTC+TGG 0.367531 2:-79407810 MsG0280011089.01.T01:CDS
AACGACAAGAACAGCGGTTA+TGG 0.368079 2:+79416971 None:intergenic
AGAATCTGCGCTAGAAGAAT+TGG 0.374112 2:-79407744 MsG0280011089.01.T01:CDS
CAAGAATCTAATTACCTTGA+GGG 0.378715 2:+79412345 None:intergenic
TTGCAACAATCTTACCTTGA+AGG 0.384508 2:+79415617 None:intergenic
ACACTGAAGTGTTGGCAATA+AGG 0.386064 2:-79407228 MsG0280011089.01.T01:CDS
CCTAGAATCGCGATCTGTAT+TGG 0.394617 2:+79417188 None:intergenic
TAAAACTTCTGCATGGCAAC+TGG 0.407805 2:+79406803 None:intergenic
GGAGGTTTCATTCTTGATAT+GGG 0.408876 2:-79413624 MsG0280011089.01.T01:CDS
TGTAGGAAAAGTTTATGATC+TGG 0.416297 2:-79407825 MsG0280011089.01.T01:intron
TACATACCTATGCAATTTGA+AGG 0.422799 2:+79407082 None:intergenic
TGGCGAGTCGTTGGCATGAA+TGG 0.428674 2:-79412668 MsG0280011089.01.T01:CDS
GTAGGAAAAGTTTATGATCT+GGG 0.429068 2:-79407824 MsG0280011089.01.T01:intron
AGCACCTACTATTCCAATTC+TGG 0.435396 2:+79408333 None:intergenic
GCTGGTAAACATGTCCTTCA+AGG 0.438255 2:-79415631 MsG0280011089.01.T01:intron
TTATAATAATATCACTGTCT+TGG 0.440259 2:-79408266 MsG0280011089.01.T01:CDS
TGCTCCTGTCATCTTTCACT+TGG 0.447411 2:-79407777 MsG0280011089.01.T01:CDS
ATCACTCAAATTGTTAAAGC+TGG 0.449244 2:-79415649 MsG0280011089.01.T01:CDS
ACAGAATTTCTTAAACATCA+TGG 0.462657 2:-79407445 MsG0280011089.01.T01:CDS
TTAAAATAATAAAATCCAAC+TGG 0.463545 2:+79406860 None:intergenic
CCAGGTAACCATGTTGTCCT+TGG 0.464149 2:+79412621 None:intergenic
GAATTGGATTGGATCGAAAT+CGG 0.464538 2:-79417232 MsG0280011089.01.T01:five_prime_UTR
AAGGTGGATATACTAGTCTA+TGG 0.474479 2:-79407291 MsG0280011089.01.T01:CDS
GCTTATGCATTATCAAGGCT+TGG 0.476324 2:-79408289 MsG0280011089.01.T01:CDS
ATTGCAAGTTCAGTGATAGT+TGG 0.477956 2:+79406723 None:intergenic
ATCATGAGTTCGACTCCAAA+TGG 0.477980 2:+79417094 None:intergenic
AGATAAACGGAAGACTAACT+TGG 0.483828 2:+79407621 None:intergenic
TGTGAATCAGTAGAAATTGA+AGG 0.484235 2:-79408217 MsG0280011089.01.T01:intron
ATAGGTATTTAATTCAAAGA+TGG 0.485770 2:-79408416 MsG0280011089.01.T01:intron
AATTCATGAATGTAAGCATA+AGG 0.488035 2:+79407352 None:intergenic
AAGAAACTAATTGCTGACCT+TGG 0.488102 2:-79414189 MsG0280011089.01.T01:CDS
ATGGATGATCCGAGTACAAT+CGG 0.490887 2:-79406830 MsG0280011089.01.T01:CDS
TGTGAGATCTCCGAGAGTCT+TGG 0.491599 2:+79417134 None:intergenic
GGTTACACAGCTTCAGGATA+CGG 0.492694 2:-79407391 MsG0280011089.01.T01:CDS
CAGCTGCTTATGCATTATCA+AGG 0.496726 2:-79408294 MsG0280011089.01.T01:CDS
AACACCAGAATTGGAATAGT+AGG 0.500209 2:-79408337 MsG0280011089.01.T01:CDS
AGAAACTAATTGCTGACCTT+GGG 0.508482 2:-79414188 MsG0280011089.01.T01:CDS
CCAAGGACAACATGGTTACC+TGG 0.511081 2:-79412621 MsG0280011089.01.T01:intron
GGAATCCACGCTCAATCTGA+AGG 0.518597 2:+79412642 None:intergenic
CTGGTGTTTAATGGCAAGGA+AGG 0.520198 2:+79408352 None:intergenic
AAGCTAGTACAGAATTGGAT+TGG 0.520878 2:-79417243 MsG0280011089.01.T01:five_prime_UTR
AGCGTGGACCCCAAAACGAC+TGG 0.521778 2:+79407495 None:intergenic
GCTATTATTGACACTTCCTC+AGG 0.522415 2:-79407707 MsG0280011089.01.T01:CDS
AGTGTGCAAGTTATTATAGA+AGG 0.522861 2:-79414156 MsG0280011089.01.T01:CDS
CTCAAATGAAATTGAGACGA+TGG 0.525047 2:-79407170 MsG0280011089.01.T01:CDS
GAATCTAAATTTGGAGATAA+CGG 0.525100 2:-79417020 MsG0280011089.01.T01:CDS
GGATCCTGAAAGATCAATAG+AGG 0.528007 2:-79408395 MsG0280011089.01.T01:CDS
ATTTCATTATATGATGCTCA+TGG 0.528500 2:-79412448 MsG0280011089.01.T01:CDS
CCCTTTGATCTTAAAAGCAG+TGG 0.529660 2:+79406895 None:intergenic
ACTGGATTTCCGATTGTACT+CGG 0.533322 2:+79406821 None:intergenic
AATTCTGGTGTTTAATGGCA+AGG 0.533400 2:+79408348 None:intergenic
CAGATTGAGCGTGGATTCCA+AGG 0.533748 2:-79412638 MsG0280011089.01.T01:CDS
CTTCAGTTACTCCACTGAAA+GGG 0.534240 2:+79412404 None:intergenic
TGAATTTACCAGAACATCCA+TGG 0.540207 2:-79407335 MsG0280011089.01.T01:CDS
TAGATCTTGTGGCGAGTCGT+TGG 0.542383 2:-79412677 MsG0280011089.01.T01:CDS
TGTTGCAGATTCTGAAGAAG+AGG 0.546411 2:-79406981 MsG0280011089.01.T01:intron
TCTTCAGTTACTCCACTGAA+AGG 0.550039 2:+79412403 None:intergenic
TGAACACATTATAGATCTTG+TGG 0.550569 2:-79412688 MsG0280011089.01.T01:intron
TTTGCCAAGTGAAAGATGAC+AGG 0.550631 2:+79407773 None:intergenic
AGAATTGGAATAGTAGGTGC+TGG 0.552501 2:-79408331 MsG0280011089.01.T01:CDS
TGGCAAGGAAGGATGTAGCT+TGG 0.558381 2:+79408363 None:intergenic
CGCTGTCAGTGAAGTTGCCG+CGG 0.569824 2:-79407476 MsG0280011089.01.T01:CDS
GAGAAACACCATGCAGTTGG+TGG 0.570878 2:-79408244 MsG0280011089.01.T01:CDS
CGTGGATTCCAAGGACAACA+TGG 0.570880 2:-79412629 MsG0280011089.01.T01:CDS
TTTACCAGAACATCCATGGC+TGG 0.570959 2:-79407331 MsG0280011089.01.T01:CDS
TGGGTGTGCATTTCATTGCA+GGG 0.573946 2:-79413605 MsG0280011089.01.T01:CDS
TTTCATTGCAGGGTTAAGGA+TGG 0.576994 2:-79413595 MsG0280011089.01.T01:intron
GGATGCTAGTGACATTGAAA+AGG 0.578839 2:-79406954 MsG0280011089.01.T01:CDS
GGGCTGGATCATATGCCAGT+TGG 0.578958 2:-79406875 MsG0280011089.01.T01:CDS
TCAATACCTTCCAAGACTCT+CGG 0.581013 2:-79417144 MsG0280011089.01.T01:CDS
CAGATCGCGATTCTAGGAGC+AGG 0.582695 2:-79417182 MsG0280011089.01.T01:CDS
AAAATTCGACGATTTAAAGG+TGG 0.591864 2:-79407307 MsG0280011089.01.T01:CDS
TCACTGTAACACTGAAGTGT+TGG 0.592076 2:-79407236 MsG0280011089.01.T01:CDS
TTTGATAAGATCATAGTCTC+CGG 0.595626 2:-79407145 MsG0280011089.01.T01:CDS
GGAACCCTTCAGATTGAGCG+TGG 0.602295 2:-79412647 MsG0280011089.01.T01:CDS
CACACATGCCACCAACTGCA+TGG 0.604044 2:+79408236 None:intergenic
TAAGCAGCTGATATGCCACT+TGG 0.605620 2:+79408307 None:intergenic
GAATCCACGCTCAATCTGAA+GGG 0.610146 2:+79412643 None:intergenic
GAAAAGTTTATGATCTGGGA+GGG 0.611014 2:-79407820 MsG0280011089.01.T01:CDS
AGATTCTGAAGAAGAGGTGA+TGG 0.617217 2:-79406975 MsG0280011089.01.T01:CDS
TCGGTTGATAACAATAACAA+TGG 0.618788 2:-79417213 MsG0280011089.01.T01:exon
TAGTTGGTCCTTAATATCAA+AGG 0.621441 2:+79406739 None:intergenic
TCAGCGCCTTCAAATTGCAT+AGG 0.628659 2:-79407088 MsG0280011089.01.T01:intron
ATCAGCATAAAACTTCTGCA+TGG 0.639165 2:+79406796 None:intergenic
AAATTCTGTAGTTAAGTCCG+CGG 0.648585 2:+79407459 None:intergenic
TGTTTCTGAAAACACCCTCA+AGG 0.651558 2:-79412359 MsG0280011089.01.T01:intron
ATAGTAGGTGCTGGTCCAAG+TGG 0.653295 2:-79408322 MsG0280011089.01.T01:CDS
CGGCAACTTCACTGACAGCG+TGG 0.662049 2:+79407479 None:intergenic
CTGAAGTGTTGGCAATAAGG+CGG 0.673827 2:-79407225 MsG0280011089.01.T01:CDS
AGATCTCCGAGAGTCTTGGA+AGG 0.674115 2:+79417138 None:intergenic
TTGGAGAAACACCATGCAGT+TGG 0.676453 2:-79408247 MsG0280011089.01.T01:CDS
GGAAAAGTTTATGATCTGGG+AGG 0.690170 2:-79407821 MsG0280011089.01.T01:CDS
AGCCAAAACGACAAGAACAG+CGG 0.710945 2:+79416965 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATATATATATATATAT+AGG - Chr2:79413256-79413275 MsG0280011089.01.T01:intron 0.0%
!! TATATATATATATATATATA+GGG - Chr2:79413257-79413276 MsG0280011089.01.T01:intron 0.0%
!! ATGTTTATTAAGTTAATTAT+TGG + Chr2:79412953-79412972 None:intergenic 10.0%
!! CCAAAAATAAAAATAAAAAT+AGG - Chr2:79413555-79413574 MsG0280011089.01.T01:intron 10.0%
!! TATATATAATATGAATGAAA+GGG + Chr2:79414634-79414653 None:intergenic 10.0%
!! TATTAATAATGACATTAAAT+TGG + Chr2:79407766-79407785 None:intergenic 10.0%
!! TGTTTATTAAGTTAATTATT+GGG + Chr2:79412952-79412971 None:intergenic 10.0%
!!! CCTATTTTTATTTTTATTTT+TGG + Chr2:79413558-79413577 None:intergenic 10.0%
!!! TATAAATCATTTTTCTTTTA+TGG - Chr2:79408630-79408649 MsG0280011089.01.T01:intron 10.0%
!!! TTATTATTTTAATGAATACA+TGG - Chr2:79417126-79417145 MsG0280011089.01.T01:CDS 10.0%
!!! TTTGAATTTTCTTTATTTTA+GGG - Chr2:79407928-79407947 MsG0280011089.01.T01:intron 10.0%
!!! TTTTGAATTTTCTTTATTTT+AGG - Chr2:79407927-79407946 MsG0280011089.01.T01:intron 10.0%
!! AAAAAAAAAAAAGTTCATGA+TGG - Chr2:79411840-79411859 MsG0280011089.01.T01:intron 15.0%
!! AAAAAAAAAAAGTTCATGAT+GGG - Chr2:79411841-79411860 MsG0280011089.01.T01:intron 15.0%
!! AAAGAAAGAAATATTTGAAT+AGG - Chr2:79409064-79409083 MsG0280011089.01.T01:intron 15.0%
!! AAGAAAGAAATATTTGAATA+GGG - Chr2:79409065-79409084 MsG0280011089.01.T01:intron 15.0%
!! ACAAACATAATAAGTAAATA+TGG + Chr2:79416933-79416952 None:intergenic 15.0%
!! ACATACATACATATATATAT+GGG + Chr2:79413467-79413486 None:intergenic 15.0%
!! ATAAATTATAAGCTCAAAAA+TGG - Chr2:79407695-79407714 MsG0280011089.01.T01:CDS 15.0%
!! ATATTAGAAACTTAGTAATT+AGG - Chr2:79410871-79410890 MsG0280011089.01.T01:intron 15.0%
!! ATTTAACAAGAATTGAAATA+CGG + Chr2:79415472-79415491 None:intergenic 15.0%
!! CTTAATTAATCAATATATAG+CGG - Chr2:79407999-79408018 MsG0280011089.01.T01:intron 15.0%
!! GTATATATAATATGAATGAA+AGG + Chr2:79414635-79414654 None:intergenic 15.0%
!! GTTTAATATTAACTTATTGT+AGG + Chr2:79413504-79413523 None:intergenic 15.0%
!! TAAATTATAAGCTCAAAAAT+GGG - Chr2:79407696-79407715 MsG0280011089.01.T01:CDS 15.0%
!! TACATACATACATATATATA+TGG + Chr2:79413468-79413487 None:intergenic 15.0%
!! TACTACTATATAGATATTAT+AGG + Chr2:79413646-79413665 None:intergenic 15.0%
!! TATATAATTGAGAATAAGAA+AGG + Chr2:79411735-79411754 None:intergenic 15.0%
!! TCATAATAATATCTATATGT+AGG - Chr2:79411405-79411424 MsG0280011089.01.T01:intron 15.0%
!! TTAAAATAATAAAATCCAAC+TGG + Chr2:79417118-79417137 None:intergenic 15.0%
!! TTAATTAATCAATATATAGC+GGG - Chr2:79408000-79408019 MsG0280011089.01.T01:intron 15.0%
!!! TACAATTTTAAGGATTAAAT+TGG - Chr2:79407887-79407906 MsG0280011089.01.T01:intron 15.0%
!!! TGTAGATTCTTTTTTTTTTT+TGG + Chr2:79412092-79412111 None:intergenic 15.0%
!!! TTCTAAAATGATTTTCATTA+TGG + Chr2:79415924-79415943 None:intergenic 15.0%
!!! TTTTTTCAATTAAGATTAGA+GGG - Chr2:79407525-79407544 MsG0280011089.01.T01:intron 15.0%
!!! TTTTTTTCAATTAAGATTAG+AGG - Chr2:79407524-79407543 MsG0280011089.01.T01:intron 15.0%
!! AAACAATATGACCAAATAAT+AGG - Chr2:79413520-79413539 MsG0280011089.01.T01:intron 20.0%
!! AAGTCAGAATATATTATTGA+CGG - Chr2:79413794-79413813 MsG0280011089.01.T01:intron 20.0%
!! AATTTAGTAACTTATCCTTA+AGG - Chr2:79415111-79415130 MsG0280011089.01.T01:intron 20.0%
!! AGAGAAATTAAAAATACATG+GGG + Chr2:79413182-79413201 None:intergenic 20.0%
!! ATAGGTATTTAATTCAAAGA+TGG - Chr2:79415559-79415578 MsG0280011089.01.T01:intron 20.0%
!! ATATATCAAAACAAAACAAG+AGG + Chr2:79412780-79412799 None:intergenic 20.0%
!! CAAAAGATGAAAAGAATTAA+TGG - Chr2:79410815-79410834 MsG0280011089.01.T01:intron 20.0%
!! CATATACACATAATAGTTAA+TGG - Chr2:79411791-79411810 MsG0280011089.01.T01:intron 20.0%
!! CATTTATTGAAATTTATGAC+TGG - Chr2:79412193-79412212 MsG0280011089.01.T01:intron 20.0%
!! CTATATTGCTAACTTAATTT+AGG - Chr2:79408740-79408759 MsG0280011089.01.T01:intron 20.0%
!! GACAAAATAAATTATGTGAA+TGG + Chr2:79409761-79409780 None:intergenic 20.0%
!! GAGAGAAATTAAAAATACAT+GGG + Chr2:79413183-79413202 None:intergenic 20.0%
!! GTATTTGGTTATTTATGTTA+AGG - Chr2:79410306-79410325 MsG0280011089.01.T01:intron 20.0%
!! TCAAATAAATAAACCAAAAC+AGG + Chr2:79415213-79415232 None:intergenic 20.0%
!! TGAGAGAAATTAAAAATACA+TGG + Chr2:79413184-79413203 None:intergenic 20.0%
!! TTAAATTGGTTATTTACTTG+CGG - Chr2:79407901-79407920 MsG0280011089.01.T01:intron 20.0%
!! TTACTAAGTTTCTAATATAG+AGG + Chr2:79410869-79410888 None:intergenic 20.0%
!! TTATAATAATATCACTGTCT+TGG - Chr2:79415709-79415728 MsG0280011089.01.T01:intron 20.0%
!! TTTAACAAGAATTGAAATAC+GGG + Chr2:79415471-79415490 None:intergenic 20.0%
!! TTTAAGAAAAGTTTCTACAT+TGG - Chr2:79409201-79409220 MsG0280011089.01.T01:intron 20.0%
!! TTTGGATAAACAATGTAATT+AGG + Chr2:79415442-79415461 None:intergenic 20.0%
!!! AAGTTTTTTTTCTTTCCTTA+AGG + Chr2:79415129-79415148 None:intergenic 20.0%
!!! ATCTTTTATTTACGTCATTT+TGG + Chr2:79407202-79407221 None:intergenic 20.0%
!!! ATTATATGCTTTTCAAGATT+CGG + Chr2:79414013-79414032 None:intergenic 20.0%
!!! ATTTGAAAAACATTTGTTGA+GGG - Chr2:79414201-79414220 MsG0280011089.01.T01:intron 20.0%
!!! CTTTATAACTTCTAAGTTTT+TGG + Chr2:79413773-79413792 None:intergenic 20.0%
!!! TATTTGAAAAACATTTGTTG+AGG - Chr2:79414200-79414219 MsG0280011089.01.T01:intron 20.0%
!!! TCACATAATTTATTTTGTCA+GGG - Chr2:79409762-79409781 MsG0280011089.01.T01:intron 20.0%
!!! TCTTTTTTTTTTTTGGAACT+CGG + Chr2:79412085-79412104 None:intergenic 20.0%
!!! TGAACTTTGTTTATTTCAAT+CGG - Chr2:79412432-79412451 MsG0280011089.01.T01:CDS 20.0%
!!! TTACTTTTATTAGCTTATAG+TGG + Chr2:79407607-79407626 None:intergenic 20.0%
!!! TTCACATAATTTATTTTGTC+AGG - Chr2:79409761-79409780 MsG0280011089.01.T01:intron 20.0%
!!! TTGACTAATAAAGACATTTT+TGG + Chr2:79407660-79407679 None:intergenic 20.0%
!!! TTTTCCTACATAACATATAT+AGG + Chr2:79416140-79416159 None:intergenic 20.0%
!!! TTTTCTGGTGAATATATTAT+TGG - Chr2:79413842-79413861 MsG0280011089.01.T01:intron 20.0%
!!! TTTTTTCCCAATAAAGTTTA+GGG + Chr2:79408220-79408239 None:intergenic 20.0%
! AAAAAGTAGTTATGGAAGAA+TGG + Chr2:79407063-79407082 None:intergenic 25.0%
! AAAGTTATCAATGTGATAGA+GGG + Chr2:79409475-79409494 None:intergenic 25.0%
! AAATCACATTGTTATAGTGT+TGG + Chr2:79414380-79414399 None:intergenic 25.0%
! AACAAATTATCAATTCTTGC+AGG - Chr2:79408293-79408312 MsG0280011089.01.T01:CDS 25.0%
! AACCTAATTAAGAAGATTTG+AGG - Chr2:79408796-79408815 MsG0280011089.01.T01:intron 25.0%
! AACGCTAAATACTTATCTAT+TGG - Chr2:79408911-79408930 MsG0280011089.01.T01:intron 25.0%
! AAGACAGATGATATATTATC+TGG + Chr2:79411013-79411032 None:intergenic 25.0%
! AATAAGCTTAAAACAGCTTA+TGG + Chr2:79415298-79415317 None:intergenic 25.0%
! AATTCATGAATGTAAGCATA+AGG + Chr2:79416626-79416645 None:intergenic 25.0%
! ACAGAATTTCTTAAACATCA+TGG - Chr2:79416530-79416549 MsG0280011089.01.T01:intron 25.0%
! ACTTCTATACAATGATTTGA+TGG - Chr2:79410898-79410917 MsG0280011089.01.T01:intron 25.0%
! AGATGAAAATATTGTTTACC+TGG + Chr2:79414575-79414594 None:intergenic 25.0%
! AGTAAATCATGTTTGCATAT+TGG - Chr2:79414044-79414063 MsG0280011089.01.T01:intron 25.0%
! AGTCAGAATATATTATTGAC+GGG - Chr2:79413795-79413814 MsG0280011089.01.T01:intron 25.0%
! AGTTCAACAACTAAAAATTC+TGG - Chr2:79413097-79413116 MsG0280011089.01.T01:intron 25.0%
! ATAAAGAGAAATTTAGTCAG+TGG + Chr2:79408496-79408515 None:intergenic 25.0%
! ATAATCTACTTGAATTAGCT+TGG - Chr2:79407575-79407594 MsG0280011089.01.T01:intron 25.0%
! ATACCAAATATGAAACATGT+TGG + Chr2:79414841-79414860 None:intergenic 25.0%
! ATACCAACATGTTTCATATT+TGG - Chr2:79414835-79414854 MsG0280011089.01.T01:intron 25.0%
! ATATATTAATCTGATACTGC+AGG - Chr2:79409578-79409597 MsG0280011089.01.T01:intron 25.0%
! ATGTTATACATTGTTTCCAT+CGG + Chr2:79415273-79415292 None:intergenic 25.0%
! ATTCTTCTTGTGATATTAAC+AGG - Chr2:79416443-79416462 MsG0280011089.01.T01:intron 25.0%
! ATTCTTGATTCAGTCTTAAA+AGG + Chr2:79412727-79412746 None:intergenic 25.0%
! ATTGTAAAATAGTGTCAACT+TGG + Chr2:79407955-79407974 None:intergenic 25.0%
! ATTTCATTATATGATGCTCA+TGG - Chr2:79411527-79411546 MsG0280011089.01.T01:intron 25.0%
! CAAAAGAAAATGCTAATCTT+GGG - Chr2:79412383-79412402 MsG0280011089.01.T01:CDS 25.0%
! CATATACATGTTTATGTTGT+GGG + Chr2:79414884-79414903 None:intergenic 25.0%
! CTGACTAAATTTCTCTTTAT+TGG - Chr2:79408496-79408515 MsG0280011089.01.T01:intron 25.0%
! CTTTACTTTCATAAAGTTTG+TGG + Chr2:79410062-79410081 None:intergenic 25.0%
! GAATCTAAATTTGGAGATAA+CGG - Chr2:79406955-79406974 MsG0280011089.01.T01:CDS 25.0%
! GATATGTCTCTTTCATAAAA+AGG - Chr2:79412803-79412822 MsG0280011089.01.T01:intron 25.0%
! GATGATGAAACACATTAATT+TGG + Chr2:79414725-79414744 None:intergenic 25.0%
! GGTAAAAAAATAGTGAATAG+CGG - Chr2:79407364-79407383 MsG0280011089.01.T01:CDS 25.0%
! GTAAAAAAATAGTGAATAGC+GGG - Chr2:79407365-79407384 MsG0280011089.01.T01:CDS 25.0%
! GTCATTCCAAATACTAATAA+AGG - Chr2:79407786-79407805 MsG0280011089.01.T01:CDS 25.0%
! TAAAATTCTAGTAGTTATCG+AGG - Chr2:79414548-79414567 MsG0280011089.01.T01:intron 25.0%
! TAAACAAGTTTGGTTATTCA+GGG + Chr2:79415174-79415193 None:intergenic 25.0%
! TAATAGAATCTTAGAAGCTA+GGG + Chr2:79408777-79408796 None:intergenic 25.0%
! TATTACTCATTGAAGCTTAA+CGG + Chr2:79413965-79413984 None:intergenic 25.0%
! TATTCTGGCATAAAAATGAA+GGG - Chr2:79409988-79410007 MsG0280011089.01.T01:intron 25.0%
! TATTCTTGAGTCCTATTATT+TGG + Chr2:79413534-79413553 None:intergenic 25.0%
! TCAGATAGTAATGAAGATAA+CGG + Chr2:79411489-79411508 None:intergenic 25.0%
! TCATTACATATAAGTGAGAT+GGG + Chr2:79409411-79409430 None:intergenic 25.0%
! TCTCACTTATATGTAATGAA+AGG - Chr2:79409412-79409431 MsG0280011089.01.T01:intron 25.0%
! TGAAGTAATTGCAAATTAAG+TGG + Chr2:79411453-79411472 None:intergenic 25.0%
! TTAAAAAAATCCGCAAGAAA+CGG - Chr2:79416039-79416058 MsG0280011089.01.T01:intron 25.0%
! TTAATAGAATCTTAGAAGCT+AGG + Chr2:79408778-79408797 None:intergenic 25.0%
! TTATCTAAGGAATATTACCT+TGG + Chr2:79414499-79414518 None:intergenic 25.0%
! TTCATATACTCAATGCTATA+AGG + Chr2:79414286-79414305 None:intergenic 25.0%
! TTCATTACATATAAGTGAGA+TGG + Chr2:79409412-79409431 None:intergenic 25.0%
! TTCCATACTCAAGTTTATTT+CGG + Chr2:79410613-79410632 None:intergenic 25.0%
! TTCCTCAAATCTTCTTAATT+AGG + Chr2:79408801-79408820 None:intergenic 25.0%
! TTCGTACCTTTATTAGTATT+TGG + Chr2:79407795-79407814 None:intergenic 25.0%
!! AAATCGTTATCTGAAATTGT+AGG - Chr2:79407230-79407249 MsG0280011089.01.T01:CDS 25.0%
!! AGTGTTTGTAAAGTTATTTC+TGG + Chr2:79411051-79411070 None:intergenic 25.0%
!! ATATTAGATGCATTGACAAA+TGG + Chr2:79412831-79412850 None:intergenic 25.0%
!! ATCTGTATTTGTTTAAGTTC+AGG - Chr2:79409924-79409943 MsG0280011089.01.T01:intron 25.0%
!! ATGTATCTGTCTAAGATAAA+CGG + Chr2:79416370-79416389 None:intergenic 25.0%
!! ATTAACATTTTGCAATTCCA+GGG - Chr2:79407819-79407838 MsG0280011089.01.T01:CDS 25.0%
!! ATTTATTTGAGTTTACCTAC+TGG - Chr2:79415223-79415242 MsG0280011089.01.T01:intron 25.0%
!! CAAATTGCTAACAAACTTTT+TGG - Chr2:79406922-79406941 MsG0280011089.01.T01:CDS 25.0%
!! CAAGATTAGCATTTTCTTTT+GGG + Chr2:79412384-79412403 None:intergenic 25.0%
!! CAATGCATCTAATATAGTTT+TGG - Chr2:79412836-79412855 MsG0280011089.01.T01:intron 25.0%
!! CACATTAATTTGGTTATTCT+TGG + Chr2:79414715-79414734 None:intergenic 25.0%
!! GACACTATTTTACAATTTGA+AGG - Chr2:79407959-79407978 MsG0280011089.01.T01:intron 25.0%
!! GAGGATAAATTTGAAACTAA+GGG + Chr2:79407736-79407755 None:intergenic 25.0%
!! TCTGTATTTGTTTAAGTTCA+GGG - Chr2:79409925-79409944 MsG0280011089.01.T01:intron 25.0%
!! TGATAAATGCTGATTATCTT+TGG - Chr2:79410493-79410512 MsG0280011089.01.T01:intron 25.0%
!! TTCATAAAGTTTGTGGTTTT+AGG + Chr2:79410055-79410074 None:intergenic 25.0%
!! TTCGTAAGATTTTCATTTCT+TGG - Chr2:79412551-79412570 MsG0280011089.01.T01:intron 25.0%
!! TTTTCAATCTCAAATCCATT+TGG - Chr2:79406866-79406885 MsG0280011089.01.T01:CDS 25.0%
!!! AAGGTATTATTTTTCCTTTC+TGG - Chr2:79410325-79410344 MsG0280011089.01.T01:intron 25.0%
!!! AAGTTATTTCTGGAAAATAG+AGG + Chr2:79411041-79411060 None:intergenic 25.0%
!!! ACTAGGTTGATACAATTTTA+AGG - Chr2:79407877-79407896 MsG0280011089.01.T01:intron 25.0%
!!! ACTAGTTTTAGAGATAAATG+GGG + Chr2:79415076-79415095 None:intergenic 25.0%
!!! ATATTTTAGTGGAAAGTTAC+CGG + Chr2:79416852-79416871 None:intergenic 25.0%
!!! ATATTTTTATCCGTTTCTTG+CGG + Chr2:79416052-79416071 None:intergenic 25.0%
!!! CACTAGTTTTAGAGATAAAT+GGG + Chr2:79415077-79415096 None:intergenic 25.0%
!!! CTTTTTCAAAACTCAATCAT+TGG - Chr2:79407077-79407096 MsG0280011089.01.T01:intron 25.0%
!!! CTTTTTTCCCAATAAAGTTT+AGG + Chr2:79408221-79408240 None:intergenic 25.0%
!!! GAGTTTTGAAAAAGTAGTTA+TGG + Chr2:79407071-79407090 None:intergenic 25.0%
!!! TAAGTTCTTCCATATTTTAG+TGG + Chr2:79416863-79416882 None:intergenic 25.0%
!!! TAGTTAATAGAGTGTTGTTA+TGG + Chr2:79415797-79415816 None:intergenic 25.0%
!!! TCACTAGTTTTAGAGATAAA+TGG + Chr2:79415078-79415097 None:intergenic 25.0%
!!! TTTGAGTAAATAACTTGTTC+TGG - Chr2:79407280-79407299 MsG0280011089.01.T01:CDS 25.0%
AAAATTCGACGATTTAAAGG+TGG - Chr2:79416668-79416687 MsG0280011089.01.T01:intron 30.0%
AAAGTGAAAATCACACCTTA+AGG + Chr2:79413330-79413349 None:intergenic 30.0%
AACTACAAAGTCTTCATTGT+TGG + Chr2:79412600-79412619 None:intergenic 30.0%
AAGTCACTACTAAGTATCAT+CGG + Chr2:79409438-79409457 None:intergenic 30.0%
AATGGAACCAAAAAATGAGA+AGG + Chr2:79411677-79411696 None:intergenic 30.0%
AATGTGTTGTCAAATTCTCT+TGG + Chr2:79414252-79414271 None:intergenic 30.0%
AATGTTTATCCTCAGTCATT+TGG - Chr2:79411098-79411117 MsG0280011089.01.T01:intron 30.0%
ACACCTTCATAAAAGTAAGT+TGG - Chr2:79413371-79413390 MsG0280011089.01.T01:intron 30.0%
ACAGATGATATATTATCTGG+CGG + Chr2:79411010-79411029 None:intergenic 30.0%
ACTTTCAATTGTCAACTCAT+AGG + Chr2:79416411-79416430 None:intergenic 30.0%
AGAAACAAATACCTCAACTA+AGG + Chr2:79409707-79409726 None:intergenic 30.0%
AGGTAAGATTGTTGCAAATT+TGG - Chr2:79408364-79408383 MsG0280011089.01.T01:CDS 30.0%
AGTGTGCAAGTTATTATAGA+AGG - Chr2:79409819-79409838 MsG0280011089.01.T01:intron 30.0%
ATAAAAGACACCTTCACAAA+AGG - Chr2:79413426-79413445 MsG0280011089.01.T01:intron 30.0%
ATATTTCCTTACATGCCATT+TGG - Chr2:79414683-79414702 MsG0280011089.01.T01:intron 30.0%
ATCACTCAAATTGTTAAAGC+TGG - Chr2:79408326-79408345 MsG0280011089.01.T01:CDS 30.0%
ATCTAGATGTATCTTCACTA+AGG - Chr2:79407333-79407352 MsG0280011089.01.T01:CDS 30.0%
ATTCCAATTCTGGTGTTTAA+TGG + Chr2:79415635-79415654 None:intergenic 30.0%
ATTCTGGCATAAAAATGAAG+GGG - Chr2:79409989-79410008 MsG0280011089.01.T01:intron 30.0%
ATTGGATGTATTGTATGCAT+TGG - Chr2:79408514-79408533 MsG0280011089.01.T01:intron 30.0%
CAAGAATCTAATTACCTTGA+GGG + Chr2:79411633-79411652 None:intergenic 30.0%
CATCAGCAACTTTAATATCT+TGG + Chr2:79416300-79416319 None:intergenic 30.0%
CCAAAAGAAAATGCTAATCT+TGG - Chr2:79412382-79412401 MsG0280011089.01.T01:CDS 30.0%
CCACAACATAAACATGTATA+TGG - Chr2:79414882-79414901 MsG0280011089.01.T01:intron 30.0%
CCATATACATGTTTATGTTG+TGG + Chr2:79414885-79414904 None:intergenic 30.0%
CTAAACAAGTTTGGTTATTC+AGG + Chr2:79415175-79415194 None:intergenic 30.0%
CTATTCTGGCATAAAAATGA+AGG - Chr2:79409987-79410006 MsG0280011089.01.T01:intron 30.0%
CTTAATCAACTCTACTATTC+TGG - Chr2:79409973-79409992 MsG0280011089.01.T01:intron 30.0%
GAAAACCAATAGTATCTATG+TGG + Chr2:79413827-79413846 None:intergenic 30.0%
GAAAGTTATCAATGTGATAG+AGG + Chr2:79409476-79409495 None:intergenic 30.0%
GACAAACATAATCAGAATCT+TGG - Chr2:79412630-79412649 MsG0280011089.01.T01:CDS 30.0%
GCAAATTAAGTGGATATTGA+AGG + Chr2:79411443-79411462 None:intergenic 30.0%
GGAAAAATTCGACGATTTAA+AGG - Chr2:79416665-79416684 MsG0280011089.01.T01:intron 30.0%
GGAAATGTGGAATCTAAATT+TGG - Chr2:79406946-79406965 MsG0280011089.01.T01:CDS 30.0%
GGTAACTTTCCACTAAAATA+TGG - Chr2:79416851-79416870 MsG0280011089.01.T01:intron 30.0%
GTAACAAATGTCAATACAGT+AGG + Chr2:79408445-79408464 None:intergenic 30.0%
GTAACAATATGCAAAGAGTT+TGG + Chr2:79414080-79414099 None:intergenic 30.0%
GTAGGAAAAGTTTATGATCT+GGG - Chr2:79416151-79416170 MsG0280011089.01.T01:intron 30.0%
GTGTATTATCAATCTTGATG+AGG + Chr2:79415016-79415035 None:intergenic 30.0%
TAACAACGTTAATGATCACA+AGG - Chr2:79414438-79414457 MsG0280011089.01.T01:intron 30.0%
TAACCATATGCAACAGAATT+AGG + Chr2:79416569-79416588 None:intergenic 30.0%
TAATCATAGAACTCTTTGCA+TGG - Chr2:79412028-79412047 MsG0280011089.01.T01:intron 30.0%
TACATACCTATGCAATTTGA+AGG + Chr2:79416896-79416915 None:intergenic 30.0%
TAGTTGGTCCTTAATATCAA+AGG + Chr2:79417239-79417258 None:intergenic 30.0%
TATAGACGAGGAATTTGTAA+TGG + Chr2:79411695-79411714 None:intergenic 30.0%
TATATCAGGTGAGCTTATAA+TGG - Chr2:79407421-79407440 MsG0280011089.01.T01:CDS 30.0%
TATCTTTGGTCTAATCAACT+GGG - Chr2:79410507-79410526 MsG0280011089.01.T01:intron 30.0%
TATGAGCATATCTACTGTTT+GGG + Chr2:79411228-79411247 None:intergenic 30.0%
TATTGGGAAAAAAGAGTCAT+TGG - Chr2:79408227-79408246 MsG0280011089.01.T01:CDS 30.0%
TCCAAGAGCTTGAAAAATAA+GGG + Chr2:79409863-79409882 None:intergenic 30.0%
TCTATACAATGATTTGATGG+TGG - Chr2:79410901-79410920 MsG0280011089.01.T01:intron 30.0%
TCTGTAGATATTGAATGAAG+AGG + Chr2:79412054-79412073 None:intergenic 30.0%
TCTTGTGATATTAACAGGAA+AGG - Chr2:79416448-79416467 MsG0280011089.01.T01:intron 30.0%
TGAACACATTATAGATCTTG+TGG - Chr2:79411287-79411306 MsG0280011089.01.T01:intron 30.0%
TGAAGATACATCTAGATAGA+GGG + Chr2:79407330-79407349 None:intergenic 30.0%
TGATAAGCTTAGCTTATATC+AGG - Chr2:79407407-79407426 MsG0280011089.01.T01:CDS 30.0%
TGGAAACTCCTTTGATATTA+AGG - Chr2:79417228-79417247 MsG0280011089.01.T01:five_prime_UTR 30.0%
TGTACTATAGTTACAGTTAC+AGG - Chr2:79411379-79411398 MsG0280011089.01.T01:intron 30.0%
TGTAGGAAAAGTTTATGATC+TGG - Chr2:79416150-79416169 MsG0280011089.01.T01:intron 30.0%
TGTGAATCAGTAGAAATTGA+AGG - Chr2:79415758-79415777 MsG0280011089.01.T01:intron 30.0%
TGTTGGAATTTAAATGTGAG+TGG + Chr2:79414363-79414382 None:intergenic 30.0%
TTATCTTTGGTCTAATCAAC+TGG - Chr2:79410506-79410525 MsG0280011089.01.T01:intron 30.0%
TTATGAGCATATCTACTGTT+TGG + Chr2:79411229-79411248 None:intergenic 30.0%
TTATTTGCCTCTCTATTAGA+TGG - Chr2:79409516-79409535 MsG0280011089.01.T01:intron 30.0%
TTCCTTAGATAATCCTATGT+TGG - Chr2:79414507-79414526 MsG0280011089.01.T01:intron 30.0%
TTGAAATGTTTCTCACTTCA+TGG - Chr2:79410678-79410697 MsG0280011089.01.T01:intron 30.0%
TTGGATGTATTGTATGCATT+GGG - Chr2:79408515-79408534 MsG0280011089.01.T01:intron 30.0%
TTTAGTTGTTGAACTGTAAC+TGG + Chr2:79413092-79413111 None:intergenic 30.0%
TTTGATAAGATCATAGTCTC+CGG - Chr2:79416830-79416849 MsG0280011089.01.T01:intron 30.0%
! AAAAAAAAGTTCATGATGGG+AGG - Chr2:79411844-79411863 MsG0280011089.01.T01:intron 30.0%
! AAACTTTTGTGCTACATGTA+AGG + Chr2:79410266-79410285 None:intergenic 30.0%
! AACTTTTGTGCTACATGTAA+GGG + Chr2:79410265-79410284 None:intergenic 30.0%
! AATATCTTGGTATTTTCCTG+AGG + Chr2:79416287-79416306 None:intergenic 30.0%
! ATAGAGAACTGCTTTCATTT+TGG - Chr2:79410716-79410735 MsG0280011089.01.T01:intron 30.0%
! ATTGCTAACAAACTTTTTGG+TGG - Chr2:79406925-79406944 MsG0280011089.01.T01:CDS 30.0%
! CAACAATATTTTCAGACTTC+CGG + Chr2:79411077-79411096 None:intergenic 30.0%
! CCAAGATTAGCATTTTCTTT+TGG + Chr2:79412385-79412404 None:intergenic 30.0%
! CGAGGATAAATTTGAAACTA+AGG + Chr2:79407737-79407756 None:intergenic 30.0%
! CTCATATTTCTTTTACTGCA+CGG - Chr2:79412339-79412358 MsG0280011089.01.T01:intron 30.0%
! CTGATTTCTTCAACTGATTT+CGG - Chr2:79415526-79415545 MsG0280011089.01.T01:intron 30.0%
! CTGTATTTGTTTAAGTTCAG+GGG - Chr2:79409926-79409945 MsG0280011089.01.T01:intron 30.0%
! GATTAACATTTTGCAATTCC+AGG - Chr2:79407818-79407837 MsG0280011089.01.T01:CDS 30.0%
! GTATTTTGTTGCGCAATTTA+TGG - Chr2:79410467-79410486 MsG0280011089.01.T01:intron 30.0%
! GTTCATGTGAAAAAGTTTTG+AGG - Chr2:79412005-79412024 MsG0280011089.01.T01:intron 30.0%
! TACGCTAAGAGTTTAGAATA+GGG + Chr2:79409555-79409574 None:intergenic 30.0%
! TCTTAAAAGGCACAAAATCA+AGG + Chr2:79412714-79412733 None:intergenic 30.0%
! TGTTTTCTCTCAACAGTATT+TGG - Chr2:79410291-79410310 MsG0280011089.01.T01:intron 30.0%
! TTACGCTAAGAGTTTAGAAT+AGG + Chr2:79409556-79409575 None:intergenic 30.0%
! TTCTTGCAAGTTTTTACTCA+TGG - Chr2:79411261-79411280 MsG0280011089.01.T01:intron 30.0%
! TTTTATCAAGTCACACCTTA+AGG - Chr2:79413312-79413331 MsG0280011089.01.T01:intron 30.0%
! TTTTCTGAATCAACTGTTTG+TGG + Chr2:79411768-79411787 None:intergenic 30.0%
! TTTTGTCTTTCCTGTAGTTT+AGG + Chr2:79413906-79413925 None:intergenic 30.0%
!! ACACCAACTTACTTTTATGA+AGG + Chr2:79413377-79413396 None:intergenic 30.0%
!! ACATTAAATTGGTAATGTCG+AGG + Chr2:79407755-79407774 None:intergenic 30.0%
!! ATTATTTTTCCTTTCTGGCA+GGG - Chr2:79410330-79410349 MsG0280011089.01.T01:intron 30.0%
!! CTCTTTCGTGTTATTTCAAA+GGG + Chr2:79409265-79409284 None:intergenic 30.0%
!! CTTATAATGGATAGGTGATA+GGG - Chr2:79407434-79407453 MsG0280011089.01.T01:CDS 30.0%
!! CTTTGAAATAACACGAAAGA+GGG - Chr2:79409264-79409283 MsG0280011089.01.T01:intron 30.0%
!! GACATTTTAACCTATGAATC+TGG - Chr2:79409731-79409750 MsG0280011089.01.T01:intron 30.0%
!! TATTATTTTTCCTTTCTGGC+AGG - Chr2:79410329-79410348 MsG0280011089.01.T01:intron 30.0%
!! TCGGTTGATAACAATAACAA+TGG - Chr2:79406762-79406781 MsG0280011089.01.T01:CDS 30.0%
!! TTTGCTGGAGTTTATTTTTC+AGG - Chr2:79408260-79408279 MsG0280011089.01.T01:CDS 30.0%
!!! AGTTCTACCTTCTCATTTTT+TGG - Chr2:79411667-79411686 MsG0280011089.01.T01:intron 30.0%
!!! ATTGGAATCATGTTTTTTGC+TGG - Chr2:79408245-79408264 MsG0280011089.01.T01:CDS 30.0%
!!! CATAGATACTATTGGTTTTC+TGG - Chr2:79413827-79413846 MsG0280011089.01.T01:intron 30.0%
!!! TCCTTTTAGTTTAGATGACA+TGG - Chr2:79410115-79410134 MsG0280011089.01.T01:intron 30.0%
!!! TCTTGTTTTTGCATGATTCT+AGG - Chr2:79408673-79408692 MsG0280011089.01.T01:intron 30.0%
!!! TTTCATCTTTTGACTTCCTA+AGG + Chr2:79410807-79410826 None:intergenic 30.0%
AAAATGAGAAGGTAGAACTG+AGG + Chr2:79411666-79411685 None:intergenic 35.0%
AAACTCAACTCTCAAGCAAA+TGG - Chr2:79413127-79413146 MsG0280011089.01.T01:intron 35.0%
AAAGTCTTCATTGTTGGAGT+TGG + Chr2:79412594-79412613 None:intergenic 35.0%
AAATTCTGTAGTTAAGTCCG+CGG + Chr2:79416519-79416538 None:intergenic 35.0%
AACACCAGAATTGGAATAGT+AGG - Chr2:79415638-79415657 MsG0280011089.01.T01:CDS 35.0%
AAGAAACTAATTGCTGACCT+TGG - Chr2:79409786-79409805 MsG0280011089.01.T01:intron 35.0%
AAGCTAGTACAGAATTGGAT+TGG - Chr2:79406732-79406751 MsG0280011089.01.T01:CDS 35.0%
AATACCTATCTAAGTGCTCT+TGG - Chr2:79408149-79408168 MsG0280011089.01.T01:intron 35.0%
AATGTGTTTCATCATCACTC+AGG - Chr2:79414729-79414748 MsG0280011089.01.T01:intron 35.0%
AATTCTGGTGTTTAATGGCA+AGG + Chr2:79415630-79415649 None:intergenic 35.0%
AGAAACTAATTGCTGACCTT+GGG - Chr2:79409787-79409806 MsG0280011089.01.T01:intron 35.0%
AGATAAACGGAAGACTAACT+TGG + Chr2:79416357-79416376 None:intergenic 35.0%
AGGAAGTTGCTAAACAAGTT+TGG + Chr2:79415184-79415203 None:intergenic 35.0%
ATCAGCATAAAACTTCTGCA+TGG + Chr2:79417182-79417201 None:intergenic 35.0%
ATCTTCACTAAGGTTCTGTT+TGG - Chr2:79407343-79407362 MsG0280011089.01.T01:CDS 35.0%
ATGAAATTTCCTGTCTCCTT+AGG - Chr2:79410788-79410807 MsG0280011089.01.T01:intron 35.0%
ATGATTGCTACAAATAGGCT+TGG + Chr2:79409323-79409342 None:intergenic 35.0%
ATGTTTGCATATTGGATGAG+AGG - Chr2:79414052-79414071 MsG0280011089.01.T01:intron 35.0%
ATTGCAAGTTCAGTGATAGT+TGG + Chr2:79417255-79417274 None:intergenic 35.0%
CAAACATGATTTACTCACTG+TGG + Chr2:79414039-79414058 None:intergenic 35.0%
CAACAATACTTAACCTCATC+AGG + Chr2:79416979-79416998 None:intergenic 35.0%
CAACTTTCCATCTAATAGAG+AGG + Chr2:79409526-79409545 None:intergenic 35.0%
CATGATTTCAAAATGATCCC+TGG + Chr2:79407839-79407858 None:intergenic 35.0%
CATTCACTTTCAGTTCATCA+CGG - Chr2:79410170-79410189 MsG0280011089.01.T01:intron 35.0%
CGAGCCTATATATGTTATGT+AGG - Chr2:79416133-79416152 MsG0280011089.01.T01:intron 35.0%
CGGAAGTCTGAAAATATTGT+TGG - Chr2:79411075-79411094 MsG0280011089.01.T01:intron 35.0%
CGTTTAAATCAGACAAGCAA+TGG + Chr2:79410639-79410658 None:intergenic 35.0%
CTCAAATGAAATTGAGACGA+TGG - Chr2:79416805-79416824 MsG0280011089.01.T01:intron 35.0%
CTCCAAGAGCTTGAAAAATA+AGG + Chr2:79409864-79409883 None:intergenic 35.0%
CTGAAACTTCTAATATCTCG+AGG - Chr2:79412235-79412254 MsG0280011089.01.T01:intron 35.0%
CTGTAACTATAGTACATACC+AGG + Chr2:79411375-79411394 None:intergenic 35.0%
CTTGTTTAGCAACTTCCTTT+AGG - Chr2:79415186-79415205 MsG0280011089.01.T01:intron 35.0%
GAAAAGTTTATGATCTGGGA+GGG - Chr2:79416155-79416174 MsG0280011089.01.T01:intron 35.0%
GAACTTGATACCTAAACTAC+AGG - Chr2:79413893-79413912 MsG0280011089.01.T01:intron 35.0%
GACTCATGATTGCTACAAAT+AGG + Chr2:79409328-79409347 None:intergenic 35.0%
GATGAACAAAGATATAGACG+AGG + Chr2:79411707-79411726 None:intergenic 35.0%
GATGATACTTAGTAGTGACT+TGG - Chr2:79409437-79409456 MsG0280011089.01.T01:intron 35.0%
GCAAGAATCTAATTACCTTG+AGG + Chr2:79411634-79411653 None:intergenic 35.0%
GCCATGTCATCTAAACTAAA+AGG + Chr2:79410119-79410138 None:intergenic 35.0%
GCCTTGTCAGTAAAAAAAAG+TGG + Chr2:79408978-79408997 None:intergenic 35.0%
GCTTACCACATAGATACTAT+TGG - Chr2:79413819-79413838 MsG0280011089.01.T01:intron 35.0%
GGAATTTAAATGTGAGTGGT+TGG + Chr2:79414359-79414378 None:intergenic 35.0%
GGAGGTTTCATTCTTGATAT+GGG - Chr2:79410351-79410370 MsG0280011089.01.T01:intron 35.0%
GTGAAGATACATCTAGATAG+AGG + Chr2:79407331-79407350 None:intergenic 35.0%
GTTCCTAATTCTGTTGCATA+TGG - Chr2:79416563-79416582 MsG0280011089.01.T01:intron 35.0%
TAAACCAAAACAGGTCCTAA+AGG + Chr2:79415204-79415223 None:intergenic 35.0%
TAACTTTACAAACACTCGAC+CGG - Chr2:79411055-79411074 MsG0280011089.01.T01:intron 35.0%
TAAGACATTGCATCATACCA+TGG + Chr2:79412677-79412696 None:intergenic 35.0%
TACAGTAGGATAATGAGTAG+TGG + Chr2:79408431-79408450 None:intergenic 35.0%
TACATATAAGTGAGATGGGA+TGG + Chr2:79409407-79409426 None:intergenic 35.0%
TAGAGTCATTGAAACTCCAA+GGG - Chr2:79408040-79408059 MsG0280011089.01.T01:intron 35.0%
TATTCTTGGTGAATGCCAAA+TGG + Chr2:79414701-79414720 None:intergenic 35.0%
TCAACTGTTTGTGGTAAGTT+TGG + Chr2:79411759-79411778 None:intergenic 35.0%
TCAGTAAGCTAGTACAGAAT+TGG - Chr2:79406727-79406746 MsG0280011089.01.T01:CDS 35.0%
TGAATTTACCAGAACATCCA+TGG - Chr2:79416640-79416659 MsG0280011089.01.T01:intron 35.0%
TGAGTGAAAGCTAGCAAAAA+TGG + Chr2:79414810-79414829 None:intergenic 35.0%
TGATAAAAGACACCACCAAA+GGG + Chr2:79413300-79413319 None:intergenic 35.0%
TGCCAACATAGGATTATCTA+AGG + Chr2:79414512-79414531 None:intergenic 35.0%
TGCCGAAATAAACTTGAGTA+TGG - Chr2:79410608-79410627 MsG0280011089.01.T01:intron 35.0%
TGGATATTGAAGGAAAAGCT+CGG + Chr2:79411433-79411452 None:intergenic 35.0%
TGGATGTATTGTATGCATTG+GGG - Chr2:79408516-79408535 MsG0280011089.01.T01:intron 35.0%
TGGATTATGGAATTTCAGCA+GGG - Chr2:79409370-79409389 MsG0280011089.01.T01:intron 35.0%
TTCATCTTGTCACTACTCTA+TGG - Chr2:79414588-79414607 MsG0280011089.01.T01:intron 35.0%
TTGAAATACGGGAACATGTT+TGG + Chr2:79415460-79415479 None:intergenic 35.0%
TTGATAAAAGACACCACCAA+AGG + Chr2:79413301-79413320 None:intergenic 35.0%
TTGCAACAATCTTACCTTGA+AGG + Chr2:79408361-79408380 None:intergenic 35.0%
TTGCCATTAAACACCAGAAT+TGG - Chr2:79415629-79415648 MsG0280011089.01.T01:intron 35.0%
! AAGGTGGATATACTAGTCTA+TGG - Chr2:79416684-79416703 MsG0280011089.01.T01:intron 35.0%
! ATAGAAGACACCTTTTGTGA+AGG + Chr2:79413439-79413458 None:intergenic 35.0%
! GAATTGGATTGGATCGAAAT+CGG - Chr2:79406743-79406762 MsG0280011089.01.T01:CDS 35.0%
! GATGTGTTTTGCTCTTTTAG+AGG - Chr2:79411947-79411966 MsG0280011089.01.T01:intron 35.0%
! TTTGAAACTAAGGGTCTGTT+TGG + Chr2:79407727-79407746 None:intergenic 35.0%
!! AAATGTTAACTTGTGCCCTT+GGG + Chr2:79409242-79409261 None:intergenic 35.0%
!! CAAACTTTTTGGTGGAAATG+TGG - Chr2:79406933-79406952 MsG0280011089.01.T01:CDS 35.0%
!! CACTTCATTTTTGCAGAAAG+CGG - Chr2:79411884-79411903 MsG0280011089.01.T01:intron 35.0%
!! CCTCTTTCGTGTTATTTCAA+AGG + Chr2:79409266-79409285 None:intergenic 35.0%
!! CCTTTGAAATAACACGAAAG+AGG - Chr2:79409263-79409282 MsG0280011089.01.T01:intron 35.0%
!! GCTTATAATGGATAGGTGAT+AGG - Chr2:79407433-79407452 MsG0280011089.01.T01:CDS 35.0%
!! TGAAGAATTCCAGTCGTTTT+GGG - Chr2:79416471-79416490 MsG0280011089.01.T01:intron 35.0%
!! TTCATTTTGGCACCAATTTG+AGG - Chr2:79410729-79410748 MsG0280011089.01.T01:intron 35.0%
!!! ACCACTGCTTTTAAGATCAA+AGG - Chr2:79417079-79417098 MsG0280011089.01.T01:CDS 35.0%
!!! ACCCTTATTTTTCAAGCTCT+TGG - Chr2:79409859-79409878 MsG0280011089.01.T01:intron 35.0%
!!! CAGGGATCATTTTGAAATCA+TGG - Chr2:79407837-79407856 MsG0280011089.01.T01:intron 35.0%
!!! CCACTGCTTTTAAGATCAAA+GGG - Chr2:79417080-79417099 MsG0280011089.01.T01:CDS 35.0%
!!! CTTATTTTTCAAGCTCTTGG+AGG - Chr2:79409862-79409881 MsG0280011089.01.T01:intron 35.0%
!!! GCCACTTTTTTTTACTGACA+AGG - Chr2:79408974-79408993 MsG0280011089.01.T01:intron 35.0%
!!! GGTTCATTTTCGAGTCAATT+TGG + Chr2:79413752-79413771 None:intergenic 35.0%
!!! GTCATTTTTACAAGCTATCC+TGG + Chr2:79415332-79415351 None:intergenic 35.0%
AACAAGCTGTCGAGAGTAAA+AGG + Chr2:79410930-79410949 None:intergenic 40.0%
AACCTCATCAGGTATCTATC+AGG + Chr2:79416968-79416987 None:intergenic 40.0%
AAGGCACAAAATCAAGGATG+TGG + Chr2:79412708-79412727 None:intergenic 40.0%
AATCCTATGTTGGCATCTGT+TGG - Chr2:79414517-79414536 MsG0280011089.01.T01:intron 40.0%
AATGAAACTGCTGAGCTCAT+TGG + Chr2:79414662-79414681 None:intergenic 40.0%
AATGATTACGTGAGACACCA+TGG - Chr2:79412657-79412676 MsG0280011089.01.T01:CDS 40.0%
ACAAATACCTCAACTAAGGC+AGG + Chr2:79409703-79409722 None:intergenic 40.0%
ACAGACCAAATTATTTGCCC+AGG + Chr2:79409658-79409677 None:intergenic 40.0%
ACAGTAGTGTTTATGCCAGT+AGG + Chr2:79415241-79415260 None:intergenic 40.0%
ACTGGATTTCCGATTGTACT+CGG + Chr2:79417157-79417176 None:intergenic 40.0%
AGAATCTGCGCTAGAAGAAT+TGG - Chr2:79416231-79416250 MsG0280011089.01.T01:intron 40.0%
AGAATTGGAATAGTAGGTGC+TGG - Chr2:79415644-79415663 MsG0280011089.01.T01:CDS 40.0%
AGCACCTACTATTCCAATTC+TGG + Chr2:79415645-79415664 None:intergenic 40.0%
AGTCTTGCAGCAGTTATAGT+GGG - Chr2:79409015-79409034 MsG0280011089.01.T01:intron 40.0%
AGTGAAGATGAACAAGTCTG+TGG - Chr2:79412123-79412142 MsG0280011089.01.T01:intron 40.0%
AGTGGTAAAAACACAGGTGT+TGG - Chr2:79408071-79408090 MsG0280011089.01.T01:intron 40.0%
ATCATGAGTTCGACTCCAAA+TGG + Chr2:79406884-79406903 None:intergenic 40.0%
ATCCATTCTCCAAATGACTG+AGG + Chr2:79411110-79411129 None:intergenic 40.0%
ATCCTCAGTCATTTGGAGAA+TGG - Chr2:79411105-79411124 MsG0280011089.01.T01:intron 40.0%
ATCCTGATAGATACCTGATG+AGG - Chr2:79416963-79416982 MsG0280011089.01.T01:CDS 40.0%
ATGCTCCTGGGCAAATAATT+TGG - Chr2:79409650-79409669 MsG0280011089.01.T01:intron 40.0%
ATGGATGATCCGAGTACAAT+CGG - Chr2:79417145-79417164 MsG0280011089.01.T01:CDS 40.0%
ATGGTGTCTCACGTAATCAT+TGG + Chr2:79412658-79412677 None:intergenic 40.0%
ATTTATATTGACCTCCCTCC+AGG + Chr2:79408132-79408151 None:intergenic 40.0%
CAGCTGCTTATGCATTATCA+AGG - Chr2:79415681-79415700 MsG0280011089.01.T01:intron 40.0%
CATTGTTGGAGTTGGATGTA+TGG + Chr2:79412586-79412605 None:intergenic 40.0%
CCCTCACCCTAAACTTTATT+GGG - Chr2:79408211-79408230 MsG0280011089.01.T01:intron 40.0%
CCCTTTGATCTTAAAAGCAG+TGG + Chr2:79417083-79417102 None:intergenic 40.0%
CCTTGGAAAAATACGTCTGA+TGG + Chr2:79414482-79414501 None:intergenic 40.0%
CTGGATTATGGAATTTCAGC+AGG - Chr2:79409369-79409388 MsG0280011089.01.T01:intron 40.0%
CTGGCATAAACACTACTGTT+TGG - Chr2:79415242-79415261 MsG0280011089.01.T01:intron 40.0%
CTGTTGATACAGGGACAATT+AGG - Chr2:79412312-79412331 MsG0280011089.01.T01:intron 40.0%
CTTCAGTTACTCCACTGAAA+GGG + Chr2:79411574-79411593 None:intergenic 40.0%
GATCATTTACCACATGCCTT+GGG + Chr2:79411171-79411190 None:intergenic 40.0%
GATGATATATTATCTGGCGG+TGG + Chr2:79411007-79411026 None:intergenic 40.0%
GCATGCAGACTAAGAAAGTA+TGG + Chr2:79408710-79408729 None:intergenic 40.0%
GCTAAAATCTGTGGCATAGT+GGG - Chr2:79412906-79412925 MsG0280011089.01.T01:intron 40.0%
GCTATTATTGACACTTCCTC+AGG - Chr2:79416268-79416287 MsG0280011089.01.T01:intron 40.0%
GCTTATGCATTATCAAGGCT+TGG - Chr2:79415686-79415705 MsG0280011089.01.T01:intron 40.0%
GCTTATTTCCTTAAGTCTCC+AGG - Chr2:79415311-79415330 MsG0280011089.01.T01:intron 40.0%
GGAAAAGTTTATGATCTGGG+AGG - Chr2:79416154-79416173 MsG0280011089.01.T01:intron 40.0%
GGATCCTGAAAGATCAATAG+AGG - Chr2:79415580-79415599 MsG0280011089.01.T01:intron 40.0%
GGATGCTAGTGACATTGAAA+AGG - Chr2:79417021-79417040 MsG0280011089.01.T01:CDS 40.0%
GGATTATGGAATTTCAGCAG+GGG - Chr2:79409371-79409390 MsG0280011089.01.T01:intron 40.0%
GGGAGGTTTCATTCTTGATA+TGG - Chr2:79410350-79410369 MsG0280011089.01.T01:intron 40.0%
GTAGAGTCATTGAAACTCCA+AGG - Chr2:79408039-79408058 MsG0280011089.01.T01:intron 40.0%
GTGTTGTCAAATTCTCTTGG+TGG + Chr2:79414249-79414268 None:intergenic 40.0%
TAAAACTTCTGCATGGCAAC+TGG + Chr2:79417175-79417194 None:intergenic 40.0%
TAATGTGCTCATGAAGGACT+AGG - Chr2:79407860-79407879 MsG0280011089.01.T01:intron 40.0%
TACTCCACTGAAAGGGAAAA+AGG + Chr2:79411567-79411586 None:intergenic 40.0%
TAGAATCTTAGAAGCTAGGG+AGG + Chr2:79408774-79408793 None:intergenic 40.0%
TAGCGAAAACGAAACCGTAA+CGG - Chr2:79412880-79412899 MsG0280011089.01.T01:intron 40.0%
TATATTATCTGGCGGTGGTA+AGG + Chr2:79411002-79411021 None:intergenic 40.0%
TATCCAACAGATGCCAACAT+AGG + Chr2:79414523-79414542 None:intergenic 40.0%
TCAATACCTTCCAAGACTCT+CGG - Chr2:79406831-79406850 MsG0280011089.01.T01:CDS 40.0%
TCACTGTAACACTGAAGTGT+TGG - Chr2:79416739-79416758 MsG0280011089.01.T01:intron 40.0%
TCATTGAAACTCCAAGGGAT+TGG - Chr2:79408045-79408064 MsG0280011089.01.T01:intron 40.0%
TCATTTGGAGAATGGATGCT+CGG - Chr2:79411113-79411132 MsG0280011089.01.T01:intron 40.0%
TCTAATCAACTGGGACTCTT+TGG - Chr2:79410516-79410535 MsG0280011089.01.T01:intron 40.0%
TCTTCAGTTACTCCACTGAA+AGG + Chr2:79411575-79411594 None:intergenic 40.0%
TGAATGCCAAATGGCATGTA+AGG + Chr2:79414692-79414711 None:intergenic 40.0%
TGATCATTTACCACATGCCT+TGG + Chr2:79411172-79411191 None:intergenic 40.0%
TGCAAATTTGGTTGTGTGTG+TGG - Chr2:79408376-79408395 MsG0280011089.01.T01:CDS 40.0%
TGCATTTCATTGCAGGGTTA+AGG - Chr2:79410376-79410395 MsG0280011089.01.T01:intron 40.0%
TGCTAAAATCTGTGGCATAG+TGG - Chr2:79412905-79412924 MsG0280011089.01.T01:intron 40.0%
TGCTCCTCTATTGATCTTTC+AGG + Chr2:79415587-79415606 None:intergenic 40.0%
TGGGCAAATAATTTGGTCTG+TGG - Chr2:79409657-79409676 MsG0280011089.01.T01:intron 40.0%
TGGTCTAGTGGTAAAAACAC+AGG - Chr2:79408065-79408084 MsG0280011089.01.T01:intron 40.0%
TTACAGATCGAGCCTCAAAT+TGG + Chr2:79410744-79410763 None:intergenic 40.0%
TTCAGCTATGACATCTCATG+TGG - Chr2:79410970-79410989 MsG0280011089.01.T01:intron 40.0%
TTCCTTAACTTATGCCCCAA+GGG - Chr2:79409224-79409243 MsG0280011089.01.T01:intron 40.0%
TTTATATTGACCTCCCTCCA+GGG + Chr2:79408131-79408150 None:intergenic 40.0%
TTTCATTGCAGGGTTAAGGA+TGG - Chr2:79410380-79410399 MsG0280011089.01.T01:intron 40.0%
TTTGCCAAGTGAAAGATGAC+AGG + Chr2:79416205-79416224 None:intergenic 40.0%
! AGATTCTGAAGAAGAGGTGA+TGG - Chr2:79417000-79417019 MsG0280011089.01.T01:CDS 40.0%
! AGTTCCTTTTTCCCTTTCAG+TGG - Chr2:79411560-79411579 MsG0280011089.01.T01:intron 40.0%
! CAGACTTGTTCATCTTCACT+TGG + Chr2:79412123-79412142 None:intergenic 40.0%
! CCAATAAAGTTTAGGGTGAG+GGG + Chr2:79408213-79408232 None:intergenic 40.0%
! CCATCAGACGTATTTTTCCA+AGG - Chr2:79414479-79414498 MsG0280011089.01.T01:intron 40.0%
! CCCAATAAAGTTTAGGGTGA+GGG + Chr2:79408214-79408233 None:intergenic 40.0%
! GTGAAGAATTCCAGTCGTTT+TGG - Chr2:79416470-79416489 MsG0280011089.01.T01:intron 40.0%
! GTGTTACAGTGAAGCTTTGT+AGG + Chr2:79416731-79416750 None:intergenic 40.0%
! TAGTCTTGCAGCAGTTATAG+TGG - Chr2:79409014-79409033 MsG0280011089.01.T01:intron 40.0%
! TCATGGTAATGTGCTCATGA+AGG - Chr2:79407854-79407873 MsG0280011089.01.T01:intron 40.0%
! TCCCAATAAAGTTTAGGGTG+AGG + Chr2:79408215-79408234 None:intergenic 40.0%
! TGTTGCAGATTCTGAAGAAG+AGG - Chr2:79416994-79417013 MsG0280011089.01.T01:CDS 40.0%
! TGTTTCTGAAAACACCCTCA+AGG - Chr2:79411616-79411635 MsG0280011089.01.T01:intron 40.0%
! TTTAGCGTTAGAAAGTGTGC+AGG + Chr2:79408900-79408919 None:intergenic 40.0%
! TTTTACTCTCGACAGCTTGT+TGG - Chr2:79410929-79410948 MsG0280011089.01.T01:intron 40.0%
! TTTTGTTACAAGCCACCCTT+TGG - Chr2:79413282-79413301 MsG0280011089.01.T01:intron 40.0%
!! AAAAACACAGGTGTTGGATC+TGG - Chr2:79408077-79408096 MsG0280011089.01.T01:intron 40.0%
!! AATGTTAACTTGTGCCCTTG+GGG + Chr2:79409241-79409260 None:intergenic 40.0%
!! ACACTGAAGTGTTGGCAATA+AGG - Chr2:79416747-79416766 MsG0280011089.01.T01:intron 40.0%
!! ACTATGCCACAGATTTTAGC+AGG + Chr2:79412906-79412925 None:intergenic 40.0%
!! ATGCTCGGGAGTATTTGTAA+TGG - Chr2:79411128-79411147 MsG0280011089.01.T01:intron 40.0%
!! CAGGTGAGCTTATAATGGAT+AGG - Chr2:79407426-79407445 MsG0280011089.01.T01:CDS 40.0%
!! CATGTTAACTTGTGCCCTAA+GGG - Chr2:79409089-79409108 MsG0280011089.01.T01:intron 40.0%
!! GAAATGTTAACTTGTGCCCT+TGG + Chr2:79409243-79409262 None:intergenic 40.0%
!! GAAGAATTCCAGTCGTTTTG+GGG - Chr2:79416472-79416491 MsG0280011089.01.T01:intron 40.0%
!! TCATGTTAACTTGTGCCCTA+AGG - Chr2:79409088-79409107 MsG0280011089.01.T01:intron 40.0%
!! TGTTGCTTTAAGCACACTTG+AGG - Chr2:79408873-79408892 MsG0280011089.01.T01:intron 40.0%
!!! ACTTCCTTTAGGACCTGTTT+TGG - Chr2:79415197-79415216 MsG0280011089.01.T01:intron 40.0%
!!! TGCTTTTAAGATCAAAGGGC+TGG - Chr2:79417084-79417103 MsG0280011089.01.T01:CDS 40.0%
!!! TTTTGACTTCCTAAGGAGAC+AGG + Chr2:79410800-79410819 None:intergenic 40.0%
AACAAGTCTGTGGATCAAGC+AGG - Chr2:79412133-79412152 MsG0280011089.01.T01:intron 45.0%
AACGACAAGAACAGCGGTTA+TGG + Chr2:79407007-79407026 None:intergenic 45.0%
ACAAAAGAAGAGCGATGCTC+AGG + Chr2:79411914-79411933 None:intergenic 45.0%
ACAAGTCTGTGGATCAAGCA+GGG - Chr2:79412134-79412153 MsG0280011089.01.T01:intron 45.0%
AGCAGGGAGATCAATGTGAT+TGG - Chr2:79412150-79412169 MsG0280011089.01.T01:intron 45.0%
AGCCAAAACGACAAGAACAG+CGG + Chr2:79407013-79407032 None:intergenic 45.0%
ATGGGTGTGCATTTCATTGC+AGG - Chr2:79410369-79410388 MsG0280011089.01.T01:intron 45.0%
CAAGCTATCCTGGAGACTTA+AGG + Chr2:79415322-79415341 None:intergenic 45.0%
CATTTGGAGAATGGATGCTC+GGG - Chr2:79411114-79411133 MsG0280011089.01.T01:intron 45.0%
CCAATACAGATCGCGATTCT+AGG - Chr2:79406787-79406806 MsG0280011089.01.T01:CDS 45.0%
CCCATGCATCTGTTGATACA+GGG - Chr2:79412303-79412322 MsG0280011089.01.T01:intron 45.0%
CCCCTCACCCTAAACTTTAT+TGG - Chr2:79408210-79408229 MsG0280011089.01.T01:intron 45.0%
CCCTGTATCAACAGATGCAT+GGG + Chr2:79412306-79412325 None:intergenic 45.0%
CCTAGAATCGCGATCTGTAT+TGG + Chr2:79406790-79406809 None:intergenic 45.0%
CTGCACACTTCTCATCTCAA+AGG - Chr2:79415035-79415054 MsG0280011089.01.T01:intron 45.0%
CTGGTGTTTAATGGCAAGGA+AGG + Chr2:79415626-79415645 None:intergenic 45.0%
CTTGAGTCTGGATCAAAGCA+GGG - Chr2:79411975-79411994 MsG0280011089.01.T01:intron 45.0%
GAATCCACGCTCAATCTGAA+GGG + Chr2:79411335-79411354 None:intergenic 45.0%
GAATGGACAGCCAGATTCAT+AGG + Chr2:79409744-79409763 None:intergenic 45.0%
GAGTTGGATGTATGGCTTCA+AGG + Chr2:79412578-79412597 None:intergenic 45.0%
GATTTCGGCAGCTTTCTCAT+AGG - Chr2:79415541-79415560 MsG0280011089.01.T01:intron 45.0%
GCATATGGTTACACAGCTTC+AGG - Chr2:79416578-79416597 MsG0280011089.01.T01:intron 45.0%
GCTGGTAAACATGTCCTTCA+AGG - Chr2:79408344-79408363 MsG0280011089.01.T01:CDS 45.0%
GGTTACACAGCTTCAGGATA+CGG - Chr2:79416584-79416603 MsG0280011089.01.T01:intron 45.0%
GTATGCATTGGGGACTGATT+TGG - Chr2:79408526-79408545 MsG0280011089.01.T01:intron 45.0%
GTCTTGCAGCAGTTATAGTG+GGG - Chr2:79409016-79409035 MsG0280011089.01.T01:intron 45.0%
GTTCCTTAACTTATGCCCCA+AGG - Chr2:79409223-79409242 MsG0280011089.01.T01:intron 45.0%
TAAAAGACACCACCAAAGGG+TGG + Chr2:79413297-79413316 None:intergenic 45.0%
TAACGGCCTGCTAAAATCTG+TGG - Chr2:79412897-79412916 MsG0280011089.01.T01:intron 45.0%
TAAGCAGCTGATATGCCACT+TGG + Chr2:79415671-79415690 None:intergenic 45.0%
TACTGCAGGTATAACTGAGC+TGG - Chr2:79409592-79409611 MsG0280011089.01.T01:intron 45.0%
TAGTTTAGATGACATGGCCG+CGG - Chr2:79410121-79410140 MsG0280011089.01.T01:intron 45.0%
TATAGAGAAACCGCAGCATC+TGG - Chr2:79408553-79408572 MsG0280011089.01.T01:intron 45.0%
TCAGCGCCTTCAAATTGCAT+AGG - Chr2:79416887-79416906 MsG0280011089.01.T01:intron 45.0%
TCCCATGCATCTGTTGATAC+AGG - Chr2:79412302-79412321 MsG0280011089.01.T01:intron 45.0%
TCCCTGTATCAACAGATGCA+TGG + Chr2:79412307-79412326 None:intergenic 45.0%
TCTAGTAGTTATCGAGGACC+AGG - Chr2:79414554-79414573 MsG0280011089.01.T01:intron 45.0%
TGATGAGGACTTAACCAGCT+AGG + Chr2:79415001-79415020 None:intergenic 45.0%
TGCTACAAATAGGCTTGGCT+TGG + Chr2:79409318-79409337 None:intergenic 45.0%
TGCTCCTGTCATCTTTCACT+TGG - Chr2:79416198-79416217 MsG0280011089.01.T01:intron 45.0%
TGGGTGTGCATTTCATTGCA+GGG - Chr2:79410370-79410389 MsG0280011089.01.T01:intron 45.0%
TTACCACTAGACCAATCCCT+TGG + Chr2:79408059-79408078 None:intergenic 45.0%
TTAGAGGCAATGCTTGAGTC+TGG - Chr2:79411963-79411982 MsG0280011089.01.T01:intron 45.0%
TTATATTGACCTCCCTCCAG+GGG + Chr2:79408130-79408149 None:intergenic 45.0%
TTGACTTTCTCAGTACTCCG+CGG + Chr2:79410141-79410160 None:intergenic 45.0%
TTGGAGAAACACCATGCAGT+TGG - Chr2:79415728-79415747 MsG0280011089.01.T01:intron 45.0%
TTTACCAGAACATCCATGGC+TGG - Chr2:79416644-79416663 MsG0280011089.01.T01:intron 45.0%
! CATCGCTCTTCTTTTGTCGA+GGG - Chr2:79411917-79411936 MsG0280011089.01.T01:intron 45.0%
! GCACACTCATCATTTTCCCA+AGG + Chr2:79409806-79409825 None:intergenic 45.0%
! TCGTCGAATTTTTCCAGCCA+TGG + Chr2:79416660-79416679 None:intergenic 45.0%
! TTTTCCAGCCATGGATGTTC+TGG + Chr2:79416651-79416670 None:intergenic 45.0%
! TTTTGAGCCTGCCTTAGTTG+AGG - Chr2:79409693-79409712 MsG0280011089.01.T01:intron 45.0%
!! AACCGCTGTTCTTGTCGTTT+TGG - Chr2:79407008-79407027 MsG0280011089.01.T01:intron 45.0%
!! ATTTTTCCTTTCTGGCAGGG+AGG - Chr2:79410333-79410352 MsG0280011089.01.T01:intron 45.0%
!! CAGATTTTAGCAGGCCGTTA+CGG + Chr2:79412897-79412916 None:intergenic 45.0%
!! CTCCTTAACTTGTGCCCTTA+GGG + Chr2:79409106-79409125 None:intergenic 45.0%
!! CTGAAGTGTTGGCAATAAGG+CGG - Chr2:79416750-79416769 MsG0280011089.01.T01:intron 45.0%
!! TCTCCTTAACTTGTGCCCTT+AGG + Chr2:79409107-79409126 None:intergenic 45.0%
!!! CGTTTTGGCTGGACAATATC+AGG - Chr2:79407023-79407042 MsG0280011089.01.T01:intron 45.0%
!!! TTATATTATTATTATTTTGA+AGG + Chr2:79413690-79413709 None:intergenic 5.0%
AGATCTCCGAGAGTCTTGGA+AGG + Chr2:79406840-79406859 None:intergenic 50.0%
ATGAAACCTCCCTGCCAGAA+AGG + Chr2:79410342-79410361 None:intergenic 50.0%
CAGATTGAGCGTGGATTCCA+AGG - Chr2:79411337-79411356 MsG0280011089.01.T01:intron 50.0%
CCAAGGACAACATGGTTACC+TGG - Chr2:79411354-79411373 MsG0280011089.01.T01:intron 50.0%
CCAAGGCAGAGAAGACCTTA+GGG + Chr2:79408177-79408196 None:intergenic 50.0%
CCAGGTAACCATGTTGTCCT+TGG + Chr2:79411357-79411376 None:intergenic 50.0%
CGATTTCTGCTGATGCTCCT+GGG - Chr2:79409638-79409657 MsG0280011089.01.T01:intron 50.0%
CGTGGATTCCAAGGACAACA+TGG - Chr2:79411346-79411365 MsG0280011089.01.T01:intron 50.0%
GAGAAACACCATGCAGTTGG+TGG - Chr2:79415731-79415750 MsG0280011089.01.T01:intron 50.0%
GCTTGAGTCTGGATCAAAGC+AGG - Chr2:79411974-79411993 MsG0280011089.01.T01:intron 50.0%
GGAATCCACGCTCAATCTGA+AGG + Chr2:79411336-79411355 None:intergenic 50.0%
GTATTAAGCTGCACGCTAGC+TGG - Chr2:79409350-79409369 MsG0280011089.01.T01:intron 50.0%
GTGTTGGATCTGGAGGTTTC+GGG - Chr2:79408087-79408106 MsG0280011089.01.T01:intron 50.0%
TAAGTGCTCTTGGAGCCCTA+AGG - Chr2:79408159-79408178 MsG0280011089.01.T01:intron 50.0%
TAGATCTTGTGGCGAGTCGT+TGG - Chr2:79411298-79411317 MsG0280011089.01.T01:intron 50.0%
TCCAAGGCAGAGAAGACCTT+AGG + Chr2:79408178-79408197 None:intergenic 50.0%
TCGATTTCTGCTGATGCTCC+TGG - Chr2:79409637-79409656 MsG0280011089.01.T01:intron 50.0%
TGCCCTTGGGGCATAAGTTA+AGG + Chr2:79409229-79409248 None:intergenic 50.0%
TGGCAAGGAAGGATGTAGCT+TGG + Chr2:79415615-79415634 None:intergenic 50.0%
TGTGAGATCTCCGAGAGTCT+TGG + Chr2:79406844-79406863 None:intergenic 50.0%
TGTTACAAGCCACCCTTTGG+TGG - Chr2:79413285-79413304 MsG0280011089.01.T01:intron 50.0%
TTGCATGCAATGCTCCTAGC+TGG - Chr2:79414984-79415003 MsG0280011089.01.T01:intron 50.0%
! ACTGTTTGGGATGCGTAGCA+TGG + Chr2:79411215-79411234 None:intergenic 50.0%
! CTGCTACTTACCAGATGCTG+CGG + Chr2:79408566-79408585 None:intergenic 50.0%
! CTGTTTGGGATGCGTAGCAT+GGG + Chr2:79411214-79411233 None:intergenic 50.0%
! GCATCGCTCTTCTTTTGTCG+AGG - Chr2:79411916-79411935 MsG0280011089.01.T01:intron 50.0%
! GGTGTTGGATCTGGAGGTTT+CGG - Chr2:79408086-79408105 MsG0280011089.01.T01:intron 50.0%
! TGCCCTAAGGGCACAAGTTA+AGG - Chr2:79409101-79409120 MsG0280011089.01.T01:intron 50.0%
!! AACACAGGTGTTGGATCTGG+AGG - Chr2:79408080-79408099 MsG0280011089.01.T01:intron 50.0%
!! ACAGCTTGTTGGATGTGAGG+TGG - Chr2:79410940-79410959 MsG0280011089.01.T01:intron 50.0%
!! ACTCCAAGGGATTGGTCTAG+TGG - Chr2:79408053-79408072 MsG0280011089.01.T01:intron 50.0%
!! ATAGTAGGTGCTGGTCCAAG+TGG - Chr2:79415653-79415672 MsG0280011089.01.T01:CDS 50.0%
!! CTACTGTTTGGAAGTGCCGA+TGG - Chr2:79415254-79415273 MsG0280011089.01.T01:intron 50.0%
!! GGCTCCAAGAGCACTTAGAT+AGG + Chr2:79408156-79408175 None:intergenic 50.0%
!! TCGACAGCTTGTTGGATGTG+AGG - Chr2:79410937-79410956 MsG0280011089.01.T01:intron 50.0%
!! TGCATTGGGGACTGATTTGG+TGG - Chr2:79408529-79408548 MsG0280011089.01.T01:intron 50.0%
!!! GCTGTTCTTGTCGTTTTGGC+TGG - Chr2:79407012-79407031 MsG0280011089.01.T01:intron 50.0%
ACATGCCTTGGGTGATCTGG+AGG + Chr2:79411160-79411179 None:intergenic 55.0%
ACCACATGCCTTGGGTGATC+TGG + Chr2:79411163-79411182 None:intergenic 55.0%
AGGTCTTCTCTGCCTTGGAC+TGG - Chr2:79408179-79408198 MsG0280011089.01.T01:intron 55.0%
CACACATGCCACCAACTGCA+TGG + Chr2:79415742-79415761 None:intergenic 55.0%
CCCTAAGGTCTTCTCTGCCT+TGG - Chr2:79408174-79408193 MsG0280011089.01.T01:intron 55.0%
GCTGCACGCTAGCTGGATTA+TGG - Chr2:79409357-79409376 MsG0280011089.01.T01:intron 55.0%
GGAACCCTTCAGATTGAGCG+TGG - Chr2:79411328-79411347 MsG0280011089.01.T01:intron 55.0%
GGGCTGGATCATATGCCAGT+TGG - Chr2:79417100-79417119 MsG0280011089.01.T01:CDS 55.0%
GGTCTTCTCTGCCTTGGACT+GGG - Chr2:79408180-79408199 MsG0280011089.01.T01:intron 55.0%
TCCAGATCACCCAAGGCATG+TGG - Chr2:79411159-79411178 MsG0280011089.01.T01:intron 55.0%
TGATCTGGGAGGGCAAGTTC+TGG - Chr2:79416165-79416184 MsG0280011089.01.T01:intron 55.0%
TGGCGAGTCGTTGGCATGAA+TGG - Chr2:79411307-79411326 MsG0280011089.01.T01:intron 55.0%
TGTCTCCTCCAGATCACCCA+AGG - Chr2:79411152-79411171 MsG0280011089.01.T01:intron 55.0%
! CAGATCGCGATTCTAGGAGC+AGG - Chr2:79406793-79406812 MsG0280011089.01.T01:CDS 55.0%
AGCGTGGACCCCAAAACGAC+TGG + Chr2:79416483-79416502 None:intergenic 60.0%
CGCTGTCAGTGAAGTTGCCG+CGG - Chr2:79416499-79416518 MsG0280011089.01.T01:intron 60.0%
CGGCAACTTCACTGACAGCG+TGG + Chr2:79416499-79416518 None:intergenic 60.0%
TGTGCACGCGCGCAATTGTC+TGG - Chr2:79408405-79408424 MsG0280011089.01.T01:CDS 60.0%
AGCTCTGCTAGTGCCCCTGG+AGG - Chr2:79408114-79408133 MsG0280011089.01.T01:intron 65.0%
CTGAGCTCTGCTAGTGCCCC+TGG - Chr2:79408111-79408130 MsG0280011089.01.T01:intron 65.0%
GCTCTGCTAGTGCCCCTGGA+GGG - Chr2:79408115-79408134 MsG0280011089.01.T01:intron 65.0%
GGGGACAGTGACCCAGTCCA+AGG + Chr2:79408194-79408213 None:intergenic 65.0%
CTGCTAGTGCCCCTGGAGGG+AGG - Chr2:79408118-79408137 MsG0280011089.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr2 gene 79406712 79417285 79406712 ID=MsG0280011089.01;Name=MsG0280011089.01
Chr2 mRNA 79406712 79417285 79406712 ID=MsG0280011089.01.T01;Parent=MsG0280011089.01;Name=MsG0280011089.01.T01;_AED=0.47;_eAED=0.47;_QI=69|0.33|0.6|1|1|1|10|0|605
Chr2 exon 79406712 79406995 79406712 ID=MsG0280011089.01.T01:exon:21422;Parent=MsG0280011089.01.T01
Chr2 exon 79407089 79407532 79407089 ID=MsG0280011089.01.T01:exon:21421;Parent=MsG0280011089.01.T01
Chr2 exon 79407636 79407842 79407636 ID=MsG0280011089.01.T01:exon:21420;Parent=MsG0280011089.01.T01
Chr2 exon 79408218 79408434 79408218 ID=MsG0280011089.01.T01:exon:21419;Parent=MsG0280011089.01.T01
Chr2 exon 79412360 79412470 79412360 ID=MsG0280011089.01.T01:exon:21418;Parent=MsG0280011089.01.T01
Chr2 exon 79412622 79412696 79412622 ID=MsG0280011089.01.T01:exon:21417;Parent=MsG0280011089.01.T01
Chr2 exon 79413596 79413646 79413596 ID=MsG0280011089.01.T01:exon:21416;Parent=MsG0280011089.01.T01
Chr2 exon 79414101 79414214 79414101 ID=MsG0280011089.01.T01:exon:21415;Parent=MsG0280011089.01.T01
Chr2 exon 79415632 79415682 79415632 ID=MsG0280011089.01.T01:exon:21414;Parent=MsG0280011089.01.T01
Chr2 exon 79416953 79417285 79416953 ID=MsG0280011089.01.T01:exon:21413;Parent=MsG0280011089.01.T01
Chr2 five_prime_UTR 79417217 79417285 79417217 ID=MsG0280011089.01.T01:five_prime_utr;Parent=MsG0280011089.01.T01
Chr2 CDS 79416953 79417216 79416953 ID=MsG0280011089.01.T01:cds;Parent=MsG0280011089.01.T01
Chr2 CDS 79415632 79415682 79415632 ID=MsG0280011089.01.T01:cds;Parent=MsG0280011089.01.T01
Chr2 CDS 79414101 79414214 79414101 ID=MsG0280011089.01.T01:cds;Parent=MsG0280011089.01.T01
Chr2 CDS 79413596 79413646 79413596 ID=MsG0280011089.01.T01:cds;Parent=MsG0280011089.01.T01
Chr2 CDS 79412622 79412696 79412622 ID=MsG0280011089.01.T01:cds;Parent=MsG0280011089.01.T01
Chr2 CDS 79412360 79412470 79412360 ID=MsG0280011089.01.T01:cds;Parent=MsG0280011089.01.T01
Chr2 CDS 79408218 79408434 79408218 ID=MsG0280011089.01.T01:cds;Parent=MsG0280011089.01.T01
Chr2 CDS 79407636 79407842 79407636 ID=MsG0280011089.01.T01:cds;Parent=MsG0280011089.01.T01
Chr2 CDS 79407089 79407532 79407089 ID=MsG0280011089.01.T01:cds;Parent=MsG0280011089.01.T01
Chr2 CDS 79406712 79406995 79406712 ID=MsG0280011089.01.T01:cds;Parent=MsG0280011089.01.T01
Gene Sequence

>MsG0280011089.01.T01

ATGGCTCCAATACAGATCGCGATTCTAGGAGCAGGTACATTTGTGAAGAATCAATACCTTCCAAGACTCTCGGAGATCTCACATCTTTTCAATCTCAAATCCATTTGGAGTCGAACTCATGATTCTGCAAATGCTGCTGTTCAAATTGCTAACAAACTTTTTGGTGGAAATGTGGAATCTAAATTTGGAGATAACGGTCTCAATGATATCATTCAAGATTCTTCCATAACCGCTGTTCTTGTCGTTTTGGCTGGACAATATCAGGTTGACATCTCATCACTCAAATTGTTAAAGCTGGTAAACATGTCCTTCAAGGGCAAGAAACTAATTGCTGACCTTGGGAAAATGATGAGTGTGCAAGTTATTATAGAAGGATCAATGAACAGTTCAAACCCTTATTTTTCAAGCTCTTGGAGGCGCAATTTTACTGGAGGTTTCATTCTTGATATGGGTGTGCATTTCATTGCAGGGTTAAGGATGATCTTGTGGCGAGTCGTTGGCATGAATGGAACCCTTCAGATTGAGCGTGGATTCCAAGGACAACATGGTTACCTGATTTCATTATATGATGCTCATGGAGAATGCAAAAGTTCCTTTTTCCCTTTCAGTGGAGTAACTGAAGAGTTAAAAGCTTTTTTCAATGATGTTTCTGAAAACACCCTCAAGGTATTTAATTCAAAGATGGATCCTGAAAGATCAATAGAGGAGCAATTCTCCAAGCTACATCCTTCCTTGCCATTAAACACCAGAATTGGAATAGTAGGTGCTGGTCCAAGTGGCATATCAGCTGCTTATGCATTATCAAGGCTTGGTTATAATAATATCACTGTCTTGGAGAAACACCATGCAGTTGGTGGCATGTGTGAATCAGTAGAAATTGAAGGAAAAGTTTATGATCTGGGAGGGCAAGTTCTGGCTGCAAGCAGTGCTCCTGTCATCTTTCACTTGGCAAAAGAGACAGAATCTGCGCTAGAAGAATTGGACTCTCACAAGCTAGCTATTATTGACACTTCCTCAGGAAAATACCAAGATATTAAAGTTGCTGATGATTATGTATCTGTTATGTCACTTACACTGAAAATCCAAGTTAGAAAGGTGAAGAATTCCAGTCGTTTTGGGGTCCACGCTGTCAGTGAAGTTGCCGCGGACTTAACTACAGAATTTCTTAAACATCATGGACTGAAATCAGTTCCTAATTCTGTTGCATATGGTTACACAGCTTCAGGATACGGATTCATACAAGACATGCCTTATGCTTACATTCATGAATTTACCAGAACATCCATGGCTGGAAAAATTCGACGATTTAAAGGTGGATATACTAGTCTATGGAAGAAGATTGCAGACTCACTTCCTACAAAGCTTCACTGTAACACTGAAGTGTTGGCAATAAGGCGGAATTCTGACAGTGTCAATGTTAATGTCAAGATCTCAAATGAAATTGAGACGATGGAATTTGATAAGATCATAGTCTCCGGTAACTTTCCACTAAAATATGGAAGAACTTACAGATCAGCGCCTTCAAATTGCATAGATTCTGAAGAAGAGGTGATGGATGCTAGTGACATTGAAAAGGAGTTATTCAGCAAAGTAGAGATAAATGACTACTACACCACTGCTTTTAAGATCAAAGGGCTGGATCATATGCCAGTTGGATTTTATTATTTTAATGAATACATGGATGATCCGAGTACAATCGGAAATCCAGTTGCCATGCAGAAGTTTTATGCTGATACTGATATATTCTTGTTCTGGTCATATGGAAACTCCTTTGATATTAAGGACCAACTATCACTGAACTTGCAATCAAAGCAATAA
Protein sequence

>MsG0280011089.01.T01

MAPIQIAILGAGTFVKNQYLPRLSEISHLFNLKSIWSRTHDSANAAVQIANKLFGGNVESKFGDNGLNDIIQDSSITAVLVVLAGQYQVDISSLKLLKLVNMSFKGKKLIADLGKMMSVQVIIEGSMNSSNPYFSSSWRRNFTGGFILDMGVHFIAGLRMILWRVVGMNGTLQIERGFQGQHGYLISLYDAHGECKSSFFPFSGVTEELKAFFNDVSENTLKVFNSKMDPERSIEEQFSKLHPSLPLNTRIGIVGAGPSGISAAYALSRLGYNNITVLEKHHAVGGMCESVEIEGKVYDLGGQVLAASSAPVIFHLAKETESALEELDSHKLAIIDTSSGKYQDIKVADDYVSVMSLTLKIQVRKVKNSSRFGVHAVSEVAADLTTEFLKHHGLKSVPNSVAYGYTASGYGFIQDMPYAYIHEFTRTSMAGKIRRFKGGYTSLWKKIADSLPTKLHCNTEVLAIRRNSDSVNVNVKISNEIETMEFDKIIVSGNFPLKYGRTYRSAPSNCIDSEEEVMDASDIEKELFSKVEINDYYTTAFKIKGLDHMPVGFYYFNEYMDDPSTIGNPVAMQKFYADTDIFLFWSYGNSFDIKDQLSLNLQSKQ*