Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380015384.01.T01 | XP_003600792.2 | 91.845 | 515 | 10 | 4 | 1 | 485 | 1 | 513 | 0 | 964 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380015384.01.T01 | Q0WSN2 | 60.388 | 515 | 160 | 7 | 8 | 485 | 21 | 528 | 0 | 583 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380015384.01.T01 | G7JA19 | 91.845 | 515 | 10 | 4 | 1 | 485 | 1 | 513 | 0.0 | 964 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0080049023.01 | MsG0380015384.01 | 0.805952 | 1.041323e-49 | 5.582379e-47 |
MsG0180001615.01 | MsG0380015384.01 | 0.814118 | 1.813180e-51 | 1.206088e-48 |
MsG0180002891.01 | MsG0380015384.01 | 0.819042 | 1.429467e-52 | 1.088069e-49 |
MsG0180003351.01 | MsG0380015384.01 | 0.800707 | 1.270054e-48 | 5.953969e-46 |
MsG0180005859.01 | MsG0380015384.01 | 0.824818 | 6.566940e-54 | 5.881219e-51 |
MsG0180005991.01 | MsG0380015384.01 | 0.822400 | 2.417184e-53 | 2.021150e-50 |
MsG0280010583.01 | MsG0380015384.01 | 0.811874 | 5.628751e-51 | 3.524514e-48 |
MsG0280011169.01 | MsG0380015384.01 | 0.831084 | 2.040071e-55 | 2.190716e-52 |
MsG0280011207.01 | MsG0380015384.01 | 0.811698 | 6.147222e-51 | 3.831137e-48 |
MsG0280011389.01 | MsG0380015384.01 | 0.800418 | 1.455038e-48 | 6.771725e-46 |
MsG0380015384.01 | MsG0380016151.01 | 0.808817 | 2.570956e-50 | 1.484613e-47 |
MsG0380015384.01 | MsG0380017353.01 | 0.804778 | 1.834734e-49 | 9.543570e-47 |
MsG0380015384.01 | MsG0380017812.01 | 0.809793 | 1.587378e-50 | 9.408421e-48 |
MsG0380015384.01 | MsG0480020838.01 | 0.817739 | 2.820689e-52 | 2.071249e-49 |
MsG0380015384.01 | MsG0480022002.01 | 0.818490 | 1.908076e-52 | 1.430319e-49 |
MsG0380015384.01 | MsG0480022935.01 | 0.828063 | 1.107228e-54 | 1.088594e-51 |
MsG0380015384.01 | MsG0480023242.01 | 0.802544 | 5.335859e-49 | 2.620784e-46 |
MsG0380015384.01 | MsG0580024768.01 | 0.805662 | 1.197847e-49 | 6.373961e-47 |
MsG0380015384.01 | MsG0580028013.01 | 0.804301 | 2.306987e-49 | 1.185313e-46 |
MsG0380015384.01 | MsG0580028397.01 | 0.815391 | 9.470330e-52 | 6.520863e-49 |
MsG0380015384.01 | MsG0580028398.01 | 0.809183 | 2.145618e-50 | 1.251253e-47 |
MsG0380015384.01 | MsG0580028403.01 | 0.803455 | 3.457800e-49 | 1.738359e-46 |
MsG0380015384.01 | MsG0780037458.01 | 0.802751 | 4.834294e-49 | 2.387128e-46 |
MsG0380015384.01 | MsG0780040154.01 | 0.814328 | 1.629372e-51 | 1.090050e-48 |
MsG0380015384.01 | MsG0780040167.01 | 0.816160 | 6.382511e-52 | 4.488222e-49 |
MsG0380015384.01 | MsG0880044333.01 | 0.816244 | 6.111251e-52 | 4.307482e-49 |
MsG0380015384.01 | MsG0880046160.01 | 0.818854 | 1.577585e-52 | 1.194588e-49 |
MsG0380015384.01 | MsG0880046630.01 | 0.800920 | 1.149131e-48 | 5.416723e-46 |
MsG0380015384.01 | MsG0880046968.01 | 0.814582 | 1.431927e-51 | 9.645587e-49 |
MsG0280010455.01 | MsG0380015384.01 | 0.815680 | 8.164816e-52 | 5.666975e-49 |
MsG0280010523.01 | MsG0380015384.01 | 0.802504 | 5.438033e-49 | 2.668273e-46 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380015384.01.T01 | MTR_3g069410 | 91.845 | 515 | 10 | 4 | 1 | 485 | 1 | 513 | 0.0 | 964 |
MsG0380015384.01.T01 | MTR_5g081160 | 68.859 | 517 | 116 | 7 | 1 | 485 | 1 | 504 | 0.0 | 676 |
MsG0380015384.01.T01 | MTR_5g018900 | 49.245 | 530 | 185 | 10 | 33 | 484 | 1 | 524 | 2.02e-153 | 447 |
MsG0380015384.01.T01 | MTR_8g078410 | 52.125 | 447 | 175 | 6 | 72 | 484 | 90 | 531 | 7.28e-141 | 415 |
MsG0380015384.01.T01 | MTR_1g021835 | 47.870 | 493 | 191 | 13 | 33 | 484 | 1 | 468 | 8.51e-141 | 413 |
MsG0380015384.01.T01 | MTR_1g021835 | 45.974 | 385 | 147 | 12 | 33 | 376 | 1 | 365 | 1.47e-103 | 316 |
MsG0380015384.01.T01 | MTR_1g021835 | 43.210 | 324 | 128 | 9 | 33 | 316 | 1 | 308 | 6.48e-79 | 249 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380015384.01.T01 | AT2G39830 | 60.388 | 515 | 160 | 7 | 8 | 485 | 21 | 528 | 0.0 | 583 |
MsG0380015384.01.T01 | AT2G39830 | 60.039 | 518 | 160 | 8 | 8 | 485 | 21 | 531 | 0.0 | 577 |
MsG0380015384.01.T01 | AT2G39830 | 59.612 | 515 | 155 | 8 | 8 | 485 | 21 | 519 | 0.0 | 568 |
MsG0380015384.01.T01 | AT2G39830 | 57.426 | 404 | 132 | 5 | 8 | 376 | 21 | 419 | 3.88e-155 | 448 |
MsG0380015384.01.T01 | AT1G19270 | 44.527 | 539 | 206 | 7 | 33 | 485 | 1 | 532 | 2.36e-145 | 427 |
MsG0380015384.01.T01 | AT1G19270 | 44.527 | 539 | 206 | 7 | 33 | 485 | 1 | 532 | 2.36e-145 | 427 |
MsG0380015384.01.T01 | AT4G36860 | 53.394 | 442 | 154 | 6 | 75 | 484 | 132 | 553 | 1.10e-144 | 426 |
MsG0380015384.01.T01 | AT4G36860 | 53.394 | 442 | 154 | 6 | 75 | 484 | 156 | 577 | 1.80e-144 | 426 |
MsG0380015384.01.T01 | AT4G36860 | 50.599 | 334 | 116 | 5 | 75 | 376 | 132 | 448 | 2.20e-103 | 317 |
MsG0380015384.01.T01 | AT5G66620 | 40.042 | 477 | 229 | 10 | 36 | 477 | 186 | 640 | 3.78e-102 | 319 |
MsG0380015384.01.T01 | AT5G66620 | 40.042 | 477 | 229 | 10 | 36 | 477 | 177 | 631 | 4.41e-102 | 319 |
MsG0380015384.01.T01 | AT5G66620 | 40.042 | 477 | 229 | 10 | 36 | 477 | 177 | 631 | 4.41e-102 | 319 |
MsG0380015384.01.T01 | AT5G66610 | 42.043 | 421 | 209 | 7 | 81 | 478 | 16 | 424 | 1.86e-96 | 298 |
MsG0380015384.01.T01 | AT5G66610 | 42.043 | 421 | 209 | 7 | 81 | 478 | 143 | 551 | 1.91e-95 | 300 |
MsG0380015384.01.T01 | AT5G66630 | 42.978 | 356 | 176 | 5 | 146 | 477 | 346 | 698 | 8.35e-90 | 289 |
MsG0380015384.01.T01 | AT5G66610 | 39.509 | 448 | 209 | 8 | 81 | 478 | 143 | 578 | 1.48e-89 | 285 |
MsG0380015384.01.T01 | AT5G66640 | 44.444 | 324 | 165 | 5 | 167 | 477 | 10 | 331 | 1.42e-86 | 270 |
MsG0380015384.01.T01 | AT5G66640 | 44.444 | 324 | 165 | 5 | 167 | 477 | 117 | 438 | 3.37e-85 | 270 |
MsG0380015384.01.T01 | AT5G66640 | 44.444 | 324 | 165 | 5 | 167 | 477 | 117 | 438 | 3.37e-85 | 270 |
MsG0380015384.01.T01 | AT5G66640 | 37.444 | 446 | 234 | 10 | 72 | 477 | 30 | 470 | 4.45e-85 | 270 |
MsG0380015384.01.T01 | AT5G66640 | 44.444 | 324 | 165 | 5 | 167 | 477 | 148 | 469 | 1.04e-84 | 269 |
MsG0380015384.01.T01 | AT5G17890 | 39.618 | 419 | 196 | 8 | 105 | 484 | 1208 | 1608 | 1.76e-82 | 279 |
MsG0380015384.01.T01 | AT5G66640 | 34.081 | 446 | 245 | 11 | 72 | 477 | 30 | 466 | 3.26e-69 | 229 |
MsG0380015384.01.T01 | AT5G66640 | 39.815 | 324 | 176 | 6 | 167 | 477 | 148 | 465 | 6.33e-69 | 228 |
MsG0380015384.01.T01 | AT5G66620 | 34.412 | 340 | 168 | 9 | 36 | 342 | 177 | 494 | 1.41e-53 | 188 |
Find 115 sgRNAs with CRISPR-Local
Find 228 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTTTATAAATATAACCTTTA+AGG | 0.090270 | 3:-69387994 | None:intergenic |
AGGCATAACCCTCTTGTTTC+TGG | 0.157651 | 3:-69387406 | None:intergenic |
CTTTCACACCCTTGCATATA+TGG | 0.193810 | 3:+69384578 | MsG0380015384.01.T01:CDS |
ATTGGAGGTCATCGATTAAT+AGG | 0.218874 | 3:+69387569 | MsG0380015384.01.T01:CDS |
CATGGTTGGTTACGCCTTAA+AGG | 0.230453 | 3:+69387980 | MsG0380015384.01.T01:CDS |
CAGCTTATGGCGGAGGCTTT+AGG | 0.247557 | 3:+69388327 | MsG0380015384.01.T01:CDS |
ATCCAAAGTTGAGAATAAAT+TGG | 0.266485 | 3:+69388265 | MsG0380015384.01.T01:CDS |
GATACTCTATGGTAATTGTT+TGG | 0.269551 | 3:+69386079 | MsG0380015384.01.T01:CDS |
CTGTATCCGCGGGGATAAAA+AGG | 0.275435 | 3:-69385693 | None:intergenic |
ACGGCTATTCTTGTTCTCTA+TGG | 0.281959 | 3:+69387635 | MsG0380015384.01.T01:CDS |
AATACCTCACGCTCAGTAAT+AGG | 0.302681 | 3:-69386158 | None:intergenic |
CACTTGCAGATACCTATAAA+TGG | 0.315905 | 3:+69386856 | MsG0380015384.01.T01:intron |
CAGATACCTATAAATGGTTC+TGG | 0.327287 | 3:+69386862 | MsG0380015384.01.T01:intron |
AATGATTCTTCTCCAGCTTA+TGG | 0.331932 | 3:+69388314 | MsG0380015384.01.T01:CDS |
ACCGCCACCCCTTCCTCTAT+TGG | 0.349455 | 3:-69385028 | None:intergenic |
ACCCAATTTATTCTCAACTT+TGG | 0.354011 | 3:-69388267 | None:intergenic |
ATACTCTATGGTAATTGTTT+GGG | 0.355449 | 3:+69386080 | MsG0380015384.01.T01:CDS |
ATCAAACCAGAACCATTTAT+AGG | 0.366116 | 3:-69386868 | None:intergenic |
GAATCTGCTATAACAGATAC+TGG | 0.369119 | 3:+69387156 | MsG0380015384.01.T01:CDS |
ACTGACCAGTCAAACGAATA+TGG | 0.374788 | 3:-69388397 | None:intergenic |
TTTCTCGTTAAGGATATAGA+TGG | 0.392201 | 3:+69385589 | MsG0380015384.01.T01:intron |
TTCAAAATTGGATCCAATAG+AGG | 0.394023 | 3:+69385015 | MsG0380015384.01.T01:CDS |
AATGCAGCTGTTAATAAATA+CGG | 0.395213 | 3:+69388356 | MsG0380015384.01.T01:CDS |
GAGAAGAATCATTGGCAATC+TGG | 0.404259 | 3:-69388304 | None:intergenic |
GTTCTGTTTACCAAGGATCT+AGG | 0.408729 | 3:-69385099 | None:intergenic |
AGTATAGGTGTCACCCCTAT+TGG | 0.411574 | 3:+69386893 | MsG0380015384.01.T01:CDS |
TTGTAGCTGTGAAAGATTAG+AGG | 0.414076 | 3:+69386963 | MsG0380015384.01.T01:CDS |
TCATACTCAGAGAGGAAGTC+TGG | 0.418210 | 3:+69384967 | MsG0380015384.01.T01:CDS |
CTAAAGCCTCCGCCATAAGC+TGG | 0.441176 | 3:-69388326 | None:intergenic |
TCCAAAGTTGAGAATAAATT+GGG | 0.442486 | 3:+69388266 | MsG0380015384.01.T01:CDS |
ACTGATGATGATTATGCAAA+AGG | 0.448006 | 3:+69385621 | MsG0380015384.01.T01:CDS |
CTCGACCATATTCGTTTGAC+TGG | 0.450760 | 3:+69388392 | MsG0380015384.01.T01:CDS |
GTTCTGGTTTGATTGAGTAT+AGG | 0.459803 | 3:+69386878 | MsG0380015384.01.T01:CDS |
TTGGAGGTCATCGATTAATA+GGG | 0.465099 | 3:+69387570 | MsG0380015384.01.T01:CDS |
GGGCGAAAGATACTTTAGAT+TGG | 0.466962 | 3:+69387101 | MsG0380015384.01.T01:CDS |
TGCAACAAGGAGATACTCTA+TGG | 0.469294 | 3:+69386068 | MsG0380015384.01.T01:CDS |
TGTTGTTTCAGATACATAGA+TGG | 0.470430 | 3:+69387540 | MsG0380015384.01.T01:intron |
GAGATGAGTGCATGCGATCC+TGG | 0.470780 | 3:-69385647 | None:intergenic |
GTCAGGTTCTTTCTTACATG+TGG | 0.478393 | 3:+69388138 | MsG0380015384.01.T01:CDS |
GATTAGAAAATGTGAAGTTA+CGG | 0.482008 | 3:+69387616 | MsG0380015384.01.T01:CDS |
TACCTTCTTCTCTCCGACGA+TGG | 0.484298 | 3:-69387289 | None:intergenic |
GAGTGACACCGAAAGCAGTC+TGG | 0.486184 | 3:-69386125 | None:intergenic |
GCGAGCTCCGCCTAGATCCT+TGG | 0.490552 | 3:+69385089 | MsG0380015384.01.T01:CDS |
CAAATCCCCATGCTTCTAGT+TGG | 0.496791 | 3:+69387246 | MsG0380015384.01.T01:CDS |
TCCAATAGAGGAAGGGGTGG+CGG | 0.500442 | 3:+69385027 | MsG0380015384.01.T01:CDS |
CGCGCCTTTCTTTGATGAGT+AGG | 0.501012 | 3:-69388240 | None:intergenic |
TCTCTAATAGCATGATAAAG+AGG | 0.502415 | 3:-69387189 | None:intergenic |
CTCTTGTTTCTGGCATGTGA+TGG | 0.503693 | 3:-69387396 | None:intergenic |
TAGAACTAGGAAGGAGGAAG+AGG | 0.505835 | 3:+69385432 | MsG0380015384.01.T01:CDS |
GCCTCCTACTCATCAAAGAA+AGG | 0.506691 | 3:+69388236 | MsG0380015384.01.T01:CDS |
CACACGAGTTAATGCATGGT+TGG | 0.511861 | 3:+69387966 | MsG0380015384.01.T01:CDS |
AGGATAACCGTGCTAGAACT+AGG | 0.513141 | 3:+69385419 | MsG0380015384.01.T01:intron |
AGATACTTTAGATTGGATGA+TGG | 0.513463 | 3:+69387108 | MsG0380015384.01.T01:CDS |
GAAGTTGTTCTTATTACAGT+GGG | 0.516770 | 3:-69388421 | None:intergenic |
TAAGGATATAGATGGCGAAC+GGG | 0.518979 | 3:+69385597 | MsG0380015384.01.T01:intron |
CTTGAAGCAGAAGTTATGTC+AGG | 0.522730 | 3:+69388161 | MsG0380015384.01.T01:CDS |
TCTCTTCCAACTAGAAGCAT+GGG | 0.524105 | 3:-69387252 | None:intergenic |
TCTTCTCCAGCTTATGGCGG+AGG | 0.528067 | 3:+69388320 | MsG0380015384.01.T01:CDS |
TTCTCTTCCAACTAGAAGCA+TGG | 0.528812 | 3:-69387253 | None:intergenic |
GAAGCTGCGGCTGATGTTGA+TGG | 0.531468 | 3:-69388197 | None:intergenic |
CACATACCTTCCTCTACTGC+AGG | 0.531634 | 3:-69388116 | None:intergenic |
ATAAGCTGGAGAAGAATCAT+TGG | 0.542129 | 3:-69388312 | None:intergenic |
CCATCGCATAACAGAATATG+TGG | 0.542226 | 3:+69386041 | MsG0380015384.01.T01:CDS |
AATTGGATCCAATAGAGGAA+GGG | 0.544250 | 3:+69385020 | MsG0380015384.01.T01:CDS |
AGAATATTGATATCTGATGA+AGG | 0.544355 | 3:-69384557 | None:intergenic |
CTTCCTCTACTGCAGGATCA+AGG | 0.544617 | 3:-69388109 | None:intergenic |
GAAGATTTAAAGATACCAGC+AGG | 0.544900 | 3:+69385487 | MsG0380015384.01.T01:CDS |
CAACCTTGATCCTGCAGTAG+AGG | 0.549878 | 3:+69388106 | MsG0380015384.01.T01:CDS |
CCTCCTTCCTAGTTCTAGCA+CGG | 0.551271 | 3:-69385426 | None:intergenic |
TGATTATGCAAAAGGACTCC+AGG | 0.551524 | 3:+69385629 | MsG0380015384.01.T01:CDS |
AGTAGAGGAAGGTATGTGTC+AGG | 0.554816 | 3:+69388121 | MsG0380015384.01.T01:CDS |
GAAAATTTACCTGTATCCGC+GGG | 0.556759 | 3:-69385703 | None:intergenic |
AGCCATCGTCGGAGAGAAGA+AGG | 0.557419 | 3:+69387287 | MsG0380015384.01.T01:CDS |
TGTGGGTGCAGGTTACTCAC+AGG | 0.558481 | 3:+69387932 | MsG0380015384.01.T01:intron |
CTTTGATGAGTAGGAGGCGG+AGG | 0.559142 | 3:-69388231 | None:intergenic |
ACTTTAGATTGGATGATGGA+CGG | 0.560406 | 3:+69387112 | MsG0380015384.01.T01:CDS |
GCCTTTCTTTGATGAGTAGG+AGG | 0.561758 | 3:-69388237 | None:intergenic |
AGAAAATACCATATATGCAA+GGG | 0.562357 | 3:-69384586 | None:intergenic |
AAGAAAATACCATATATGCA+AGG | 0.562532 | 3:-69384587 | None:intergenic |
CTACTGCAGGATCAAGGTTG+CGG | 0.567251 | 3:-69388103 | None:intergenic |
AAATTGGATCCAATAGAGGA+AGG | 0.570246 | 3:+69385019 | MsG0380015384.01.T01:CDS |
GTATTATCATGTTCATGAGA+TGG | 0.570316 | 3:-69386931 | None:intergenic |
CTTGATCCTGCAGTAGAGGA+AGG | 0.575792 | 3:+69388110 | MsG0380015384.01.T01:CDS |
ACCTTCTCCTTGAAGTCTCG+GGG | 0.578667 | 3:+69387081 | MsG0380015384.01.T01:intron |
TGACAGTCTGTTCTTCTGAA+AGG | 0.579709 | 3:-69387426 | None:intergenic |
AAGGTAAAGGAGCGCATGGA+GGG | 0.580876 | 3:-69385674 | None:intergenic |
ATTGGATCCAATAGAGGAAG+GGG | 0.580906 | 3:+69385021 | MsG0380015384.01.T01:CDS |
TTTCTTTGATGAGTAGGAGG+CGG | 0.582160 | 3:-69388234 | None:intergenic |
CCACATATTCTGTTATGCGA+TGG | 0.593174 | 3:-69386041 | None:intergenic |
AGAAGTTGTTCTTATTACAG+TGG | 0.596071 | 3:-69388422 | None:intergenic |
TTGTTCTCTATGGTCTTCCG+AGG | 0.596093 | 3:+69387645 | MsG0380015384.01.T01:CDS |
CTGTAGACGAAAACATGGCT+TGG | 0.602540 | 3:+69385067 | MsG0380015384.01.T01:CDS |
CATGCATTAACTCGTGTGCA+AGG | 0.604183 | 3:-69387961 | None:intergenic |
CATCACATGCCAGAAACAAG+AGG | 0.608056 | 3:+69387397 | MsG0380015384.01.T01:CDS |
GCTATTAGAGACTATTACGA+AGG | 0.610014 | 3:+69387201 | MsG0380015384.01.T01:CDS |
GGAAAATTTACCTGTATCCG+CGG | 0.614083 | 3:-69385704 | None:intergenic |
TTAAGGATATAGATGGCGAA+CGG | 0.616195 | 3:+69385596 | MsG0380015384.01.T01:intron |
TAACCGTGCTAGAACTAGGA+AGG | 0.619072 | 3:+69385423 | MsG0380015384.01.T01:CDS |
CTTGCACACGAGTTAATGCA+TGG | 0.621249 | 3:+69387962 | MsG0380015384.01.T01:CDS |
GGTAGAAGAAGAAGAAGCTG+CGG | 0.625167 | 3:-69388210 | None:intergenic |
GATTCTTCTCCAGCTTATGG+CGG | 0.631107 | 3:+69388317 | MsG0380015384.01.T01:CDS |
CTCTTCCAACTAGAAGCATG+GGG | 0.633927 | 3:-69387251 | None:intergenic |
GCACTTAATGAAGCCATCGT+CGG | 0.646144 | 3:+69387276 | MsG0380015384.01.T01:CDS |
TCATCCTATTACTGAGCGTG+AGG | 0.648329 | 3:+69386154 | MsG0380015384.01.T01:CDS |
TTTCTTCTTCATACTCAGAG+AGG | 0.657884 | 3:+69384959 | MsG0380015384.01.T01:CDS |
ATCACATGCCAGAAACAAGA+GGG | 0.660956 | 3:+69387398 | MsG0380015384.01.T01:CDS |
CCGTGCTAGAACTAGGAAGG+AGG | 0.672994 | 3:+69385426 | MsG0380015384.01.T01:CDS |
GCAACCTGTAGACGAAAACA+TGG | 0.674646 | 3:+69385062 | MsG0380015384.01.T01:CDS |
AATATGTGGAGGATGCAACA+AGG | 0.680326 | 3:+69386055 | MsG0380015384.01.T01:CDS |
GGATCCAATAGAGGAAGGGG+TGG | 0.681667 | 3:+69385024 | MsG0380015384.01.T01:CDS |
AAAGGTAAAGGAGCGCATGG+AGG | 0.686908 | 3:-69385675 | None:intergenic |
TCGCATAACAGAATATGTGG+AGG | 0.700111 | 3:+69386044 | MsG0380015384.01.T01:CDS |
CTGTTTACCAAGGATCTAGG+CGG | 0.702697 | 3:-69385096 | None:intergenic |
AAAATTTACCTGTATCCGCG+GGG | 0.764166 | 3:-69385702 | None:intergenic |
ATATTGATATCTGATGAAGG+AGG | 0.767738 | 3:-69384554 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATATTCTTGTTTTTTATTTT+TGG | + | Chr3:69384716-69384735 | MsG0380015384.01.T01:intron | 10.0% |
!!! | TATATTTATGTTTAAGTTAT+AGG | - | Chr3:69384811-69384830 | None:intergenic | 10.0% |
!! | AACAGAAAATCATAAATAAA+TGG | - | Chr3:69387524-69387543 | None:intergenic | 15.0% |
!! | CTAAATGATTACAAATAAAT+AGG | - | Chr3:69386675-69386694 | None:intergenic | 15.0% |
!! | GTTTATAAATATAACCTTTA+AGG | - | Chr3:69387997-69388016 | None:intergenic | 15.0% |
!!! | GTACTAAATTTTTTAAAAAG+TGG | - | Chr3:69387735-69387754 | None:intergenic | 15.0% |
!! | AAAATTGCAACAACAAAAAA+GGG | - | Chr3:69384921-69384940 | None:intergenic | 20.0% |
!! | AAGAAAAACTTACATAATGA+TGG | - | Chr3:69386483-69386502 | None:intergenic | 20.0% |
!! | AATGTCATAAGAAAACTATT+TGG | - | Chr3:69386611-69386630 | None:intergenic | 20.0% |
!! | GTATTAAAGATTAATTACCT+CGG | - | Chr3:69387665-69387684 | None:intergenic | 20.0% |
!! | TAAATAGATATACATAAGGA+AGG | - | Chr3:69384634-69384653 | None:intergenic | 20.0% |
!! | TAATCTTTAATACACAACAA+TGG | + | Chr3:69387672-69387691 | MsG0380015384.01.T01:intron | 20.0% |
!! | TAGTTTAAGTCATTAAATGT+CGG | + | Chr3:69386556-69386575 | MsG0380015384.01.T01:intron | 20.0% |
!! | TATCATTTCTCAAAATTCAT+AGG | - | Chr3:69387757-69387776 | None:intergenic | 20.0% |
!! | TCATTTATCTTAATCTAATC+AGG | + | Chr3:69388077-69388096 | MsG0380015384.01.T01:intron | 20.0% |
!! | TTAAAACAATACTTGTGATA+TGG | - | Chr3:69386430-69386449 | None:intergenic | 20.0% |
!! | TTATTTCCATGATCTTAAAA+AGG | - | Chr3:69387010-69387029 | None:intergenic | 20.0% |
!! | TTCAATAAATCAATATCTGA+TGG | + | Chr3:69385976-69385995 | MsG0380015384.01.T01:intron | 20.0% |
!!! | AATTTTACACCTTAAAATTG+TGG | - | Chr3:69387852-69387871 | None:intergenic | 20.0% |
!!! | ATATCACAAGTATTGTTTTA+AGG | + | Chr3:69386429-69386448 | MsG0380015384.01.T01:intron | 20.0% |
!!! | CATTTTCTAATCAATTTTTG+AGG | - | Chr3:69387608-69387627 | None:intergenic | 20.0% |
!!! | GTACATGTATTCAATATTTT+CGG | + | Chr3:69386277-69386296 | MsG0380015384.01.T01:intron | 20.0% |
! | AAAACACTGTTCAAATTCAA+AGG | - | Chr3:69385874-69385893 | None:intergenic | 25.0% |
! | AAGAAAACTAATAACCAAGT+AGG | - | Chr3:69386533-69386552 | None:intergenic | 25.0% |
! | AAGAAAATACCATATATGCA+AGG | - | Chr3:69384590-69384609 | None:intergenic | 25.0% |
! | AAGTAAGTCATGTAATACTA+AGG | - | Chr3:69388047-69388066 | None:intergenic | 25.0% |
! | AAGTGTTCTGATATATTTGT+GGG | + | Chr3:69387915-69387934 | MsG0380015384.01.T01:intron | 25.0% |
! | AAGTTTCGATAACAATTAGA+TGG | + | Chr3:69387779-69387798 | MsG0380015384.01.T01:intron | 25.0% |
! | AATCTTGACTTATATGAAGT+TGG | - | Chr3:69385772-69385791 | None:intergenic | 25.0% |
! | AATGCAGCTGTTAATAAATA+CGG | + | Chr3:69388356-69388375 | MsG0380015384.01.T01:CDS | 25.0% |
! | AATTGAAGTTGTCGTTAAAA+TGG | + | Chr3:69386643-69386662 | MsG0380015384.01.T01:intron | 25.0% |
! | AATTGAATTAACCTTGAGAT+GGG | - | Chr3:69385236-69385255 | None:intergenic | 25.0% |
! | ACAATATTCTTGATGCTAAT+AGG | + | Chr3:69385399-69385418 | MsG0380015384.01.T01:intron | 25.0% |
! | AGAAAATACCATATATGCAA+GGG | - | Chr3:69384589-69384608 | None:intergenic | 25.0% |
! | AGAATATTGATATCTGATGA+AGG | - | Chr3:69384560-69384579 | None:intergenic | 25.0% |
! | ATACATAAGGAAGGAAAAAT+AGG | - | Chr3:69384625-69384644 | None:intergenic | 25.0% |
! | ATACATAGATGGTCAAAAAT+TGG | + | Chr3:69387551-69387570 | MsG0380015384.01.T01:CDS | 25.0% |
! | ATACTCTATGGTAATTGTTT+GGG | + | Chr3:69386080-69386099 | MsG0380015384.01.T01:CDS | 25.0% |
! | ATCCAAAGTTGAGAATAAAT+TGG | + | Chr3:69388265-69388284 | MsG0380015384.01.T01:CDS | 25.0% |
! | ATTGTGAAAAAAGAAATGGA+AGG | - | Chr3:69386508-69386527 | None:intergenic | 25.0% |
! | ATTGTTTAGTACATTGATCT+AGG | - | Chr3:69385384-69385403 | None:intergenic | 25.0% |
! | CAAAATTGCAACAACAAAAA+AGG | - | Chr3:69384922-69384941 | None:intergenic | 25.0% |
! | CATTGATCAATCATATGATA+TGG | + | Chr3:69386720-69386739 | MsG0380015384.01.T01:intron | 25.0% |
! | GATTAGAAAATGTGAAGTTA+CGG | + | Chr3:69387616-69387635 | MsG0380015384.01.T01:CDS | 25.0% |
! | TAATTGAATTAACCTTGAGA+TGG | - | Chr3:69385237-69385256 | None:intergenic | 25.0% |
! | TATGACTGAAAAACAAAGAA+TGG | - | Chr3:69387325-69387344 | None:intergenic | 25.0% |
! | TCCAAAGTTGAGAATAAATT+GGG | + | Chr3:69388266-69388285 | MsG0380015384.01.T01:CDS | 25.0% |
! | TTATATTTATTCCCATCTCA+AGG | + | Chr3:69385222-69385241 | MsG0380015384.01.T01:intron | 25.0% |
! | TTGTGAAAAAAGAAATGGAA+GGG | - | Chr3:69386507-69386526 | None:intergenic | 25.0% |
!! | GCTCTAAATAGATATACATA+AGG | - | Chr3:69384638-69384657 | None:intergenic | 25.0% |
!! | TATATCTATTTAGAGCTTCA+TGG | + | Chr3:69384642-69384661 | MsG0380015384.01.T01:intron | 25.0% |
!! | TTATTTGCATTTTCTCGTTA+AGG | + | Chr3:69385579-69385598 | MsG0380015384.01.T01:intron | 25.0% |
!! | TTTGGCAAGATTTTCAAAAT+TGG | + | Chr3:69385003-69385022 | MsG0380015384.01.T01:CDS | 25.0% |
!! | TTTTCTGATATATCAATGGA+AGG | - | Chr3:69386758-69386777 | None:intergenic | 25.0% |
!! | TTTTGAATTTTAGACTGTGT+AGG | + | Chr3:69385318-69385337 | MsG0380015384.01.T01:intron | 25.0% |
!!! | AATATTTTTGGTTCCAATAG+GGG | - | Chr3:69386909-69386928 | None:intergenic | 25.0% |
!!! | ACAATATTTTTGGTTCCAAT+AGG | - | Chr3:69386911-69386930 | None:intergenic | 25.0% |
!!! | ATTCTTTGTTTTTCAGTCAT+AGG | + | Chr3:69387324-69387343 | MsG0380015384.01.T01:intron | 25.0% |
!!! | CAATATTTTTGGTTCCAATA+GGG | - | Chr3:69386910-69386929 | None:intergenic | 25.0% |
!!! | CTAGTTTTCTGATATATCAA+TGG | - | Chr3:69386762-69386781 | None:intergenic | 25.0% |
!!! | CTTTTTTGTTGTTGCAATTT+TGG | + | Chr3:69384920-69384939 | MsG0380015384.01.T01:intron | 25.0% |
!!! | TTATCACCTTTTTAAGATCA+TGG | + | Chr3:69387001-69387020 | MsG0380015384.01.T01:intron | 25.0% |
AAAAGTGGATCATCTGTAAT+TGG | - | Chr3:69387720-69387739 | None:intergenic | 30.0% | |
AAGCAATTAGCAAGAGTAAA+AGG | - | Chr3:69387359-69387378 | None:intergenic | 30.0% | |
ACCCAATTTATTCTCAACTT+TGG | - | Chr3:69388270-69388289 | None:intergenic | 30.0% | |
ACTGAAAAACAAAGAATGGA+TGG | - | Chr3:69387321-69387340 | None:intergenic | 30.0% | |
AGATACTTTAGATTGGATGA+TGG | + | Chr3:69387108-69387127 | MsG0380015384.01.T01:CDS | 30.0% | |
AGGAAGGAAAAATAGGAAAA+AGG | - | Chr3:69384618-69384637 | None:intergenic | 30.0% | |
ATATTGATATCTGATGAAGG+AGG | - | Chr3:69384557-69384576 | None:intergenic | 30.0% | |
ATCAAACCAGAACCATTTAT+AGG | - | Chr3:69386871-69386890 | None:intergenic | 30.0% | |
CAAATTTCGCATATCAACAA+GGG | - | Chr3:69384866-69384885 | None:intergenic | 30.0% | |
CAAGTGTTCTGATATATTTG+TGG | + | Chr3:69387914-69387933 | MsG0380015384.01.T01:intron | 30.0% | |
GATACTCTATGGTAATTGTT+TGG | + | Chr3:69386079-69386098 | MsG0380015384.01.T01:CDS | 30.0% | |
GGACATTGTGAAAAAAGAAA+TGG | - | Chr3:69386512-69386531 | None:intergenic | 30.0% | |
GTATTATCATGTTCATGAGA+TGG | - | Chr3:69386934-69386953 | None:intergenic | 30.0% | |
TCAAATTTCGCATATCAACA+AGG | - | Chr3:69384867-69384886 | None:intergenic | 30.0% | |
TCTCTAATAGCATGATAAAG+AGG | - | Chr3:69387192-69387211 | None:intergenic | 30.0% | |
TCTGATAAAACAAAAGCAGA+AGG | - | Chr3:69387472-69387491 | None:intergenic | 30.0% | |
TGTGAAAAAAGAAATGGAAG+GGG | - | Chr3:69386506-69386525 | None:intergenic | 30.0% | |
TTCAAAATTGGATCCAATAG+AGG | + | Chr3:69385015-69385034 | MsG0380015384.01.T01:CDS | 30.0% | |
TTTCTCGTTAAGGATATAGA+TGG | + | Chr3:69385589-69385608 | MsG0380015384.01.T01:intron | 30.0% | |
! | ACTGATGATGATTATGCAAA+AGG | + | Chr3:69385621-69385640 | MsG0380015384.01.T01:CDS | 30.0% |
! | CATGAGATGGACAATATTTT+TGG | - | Chr3:69386921-69386940 | None:intergenic | 30.0% |
! | GTACTGATCAAAATTAGAAG+AGG | - | Chr3:69385728-69385747 | None:intergenic | 30.0% |
! | TTTTACTCTTGCTAATTGCT+TGG | + | Chr3:69387358-69387377 | MsG0380015384.01.T01:intron | 30.0% |
!! | AGGTATTGAAAATCATACAC+TGG | - | Chr3:69387452-69387471 | None:intergenic | 30.0% |
!! | TGTTGTTTCAGATACATAGA+TGG | + | Chr3:69387540-69387559 | MsG0380015384.01.T01:intron | 30.0% |
!!! | TCTGGTTTTATGAAATGGTT+TGG | + | Chr3:69384985-69385004 | MsG0380015384.01.T01:CDS | 30.0% |
!!! | TTTGTTGTTGCAATTTTGGT+GGG | + | Chr3:69384924-69384943 | MsG0380015384.01.T01:intron | 30.0% |
!!! | TTTTGTTGTTGCAATTTTGG+TGG | + | Chr3:69384923-69384942 | MsG0380015384.01.T01:intron | 30.0% |
!!! | TTTTTTCACAATGTCCTACT+TGG | + | Chr3:69386516-69386535 | MsG0380015384.01.T01:intron | 30.0% |
AAAGCAGATAGTTGAGTCAT+TGG | - | Chr3:69385124-69385143 | None:intergenic | 35.0% | |
AAATTGGATCCAATAGAGGA+AGG | + | Chr3:69385019-69385038 | MsG0380015384.01.T01:CDS | 35.0% | |
AATGATTCTTCTCCAGCTTA+TGG | + | Chr3:69388314-69388333 | MsG0380015384.01.T01:CDS | 35.0% | |
AATTGGATCCAATAGAGGAA+GGG | + | Chr3:69385020-69385039 | MsG0380015384.01.T01:CDS | 35.0% | |
AGTTCTCTAATATCGCATCA+CGG | - | Chr3:69384761-69384780 | None:intergenic | 35.0% | |
ATAAGCTGGAGAAGAATCAT+TGG | - | Chr3:69388315-69388334 | None:intergenic | 35.0% | |
ATTTAAAGATACCAGCAGGT+AGG | + | Chr3:69385491-69385510 | MsG0380015384.01.T01:intron | 35.0% | |
CACTTGCAGATACCTATAAA+TGG | + | Chr3:69386856-69386875 | MsG0380015384.01.T01:intron | 35.0% | |
CAGATACCTATAAATGGTTC+TGG | + | Chr3:69386862-69386881 | MsG0380015384.01.T01:intron | 35.0% | |
CATAGATGGTCAAAAATTGG+AGG | + | Chr3:69387554-69387573 | MsG0380015384.01.T01:CDS | 35.0% | |
CTTGGATCAACAGAAACAAA+AGG | - | Chr3:69386386-69386405 | None:intergenic | 35.0% | |
GAAGATTTAAAGATACCAGC+AGG | + | Chr3:69385487-69385506 | MsG0380015384.01.T01:CDS | 35.0% | |
GAATCTGCTATAACAGATAC+TGG | + | Chr3:69387156-69387175 | MsG0380015384.01.T01:CDS | 35.0% | |
GCTATTAGAGACTATTACGA+AGG | + | Chr3:69387201-69387220 | MsG0380015384.01.T01:CDS | 35.0% | |
TAATTGCTTGGTTTCTACCA+GGG | + | Chr3:69387370-69387389 | MsG0380015384.01.T01:intron | 35.0% | |
TGATGGCAAACTTCACATTT+AGG | - | Chr3:69386466-69386485 | None:intergenic | 35.0% | |
TTAAGGATATAGATGGCGAA+CGG | + | Chr3:69385596-69385615 | MsG0380015384.01.T01:intron | 35.0% | |
TTGACTTATATGAAGTTGGC+TGG | - | Chr3:69385768-69385787 | None:intergenic | 35.0% | |
TTGTAGCTGTGAAAGATTAG+AGG | + | Chr3:69386963-69386982 | MsG0380015384.01.T01:CDS | 35.0% | |
TTTCTTCTTCATACTCAGAG+AGG | + | Chr3:69384959-69384978 | MsG0380015384.01.T01:CDS | 35.0% | |
! | ATTGGAGGTCATCGATTAAT+AGG | + | Chr3:69387569-69387588 | MsG0380015384.01.T01:CDS | 35.0% |
! | ATTTTCATCCAGACTGCTTT+CGG | + | Chr3:69386117-69386136 | MsG0380015384.01.T01:CDS | 35.0% |
! | CCTCTTTTATCCATCTCTTA+CGG | + | Chr3:69386360-69386379 | MsG0380015384.01.T01:intron | 35.0% |
! | GATCCAAGTTTTCTTTGTCA+GGG | + | Chr3:69386398-69386417 | MsG0380015384.01.T01:intron | 35.0% |
! | TGATCCAAGTTTTCTTTGTC+AGG | + | Chr3:69386397-69386416 | MsG0380015384.01.T01:intron | 35.0% |
! | TTGGAGGTCATCGATTAATA+GGG | + | Chr3:69387570-69387589 | MsG0380015384.01.T01:CDS | 35.0% |
!! | ACTTTAGATTGGATGATGGA+CGG | + | Chr3:69387112-69387131 | MsG0380015384.01.T01:CDS | 35.0% |
!! | GATTTTGTGCTTTGAATGCA+TGG | + | Chr3:69387134-69387153 | MsG0380015384.01.T01:CDS | 35.0% |
!! | GTTCTGGTTTGATTGAGTAT+AGG | + | Chr3:69386878-69386897 | MsG0380015384.01.T01:CDS | 35.0% |
!!! | GGAAGTCTGGTTTTATGAAA+TGG | + | Chr3:69384980-69384999 | MsG0380015384.01.T01:CDS | 35.0% |
AAAATCATGCGTTGAGTGGA+TGG | - | Chr3:69387820-69387839 | None:intergenic | 40.0% | |
AAAATTTACCTGTATCCGCG+GGG | - | Chr3:69385705-69385724 | None:intergenic | 40.0% | |
AAACAAAAGGCCGTAAGAGA+TGG | - | Chr3:69386373-69386392 | None:intergenic | 40.0% | |
AATACCTCACGCTCAGTAAT+AGG | - | Chr3:69386161-69386180 | None:intergenic | 40.0% | |
AATATGTGGAGGATGCAACA+AGG | + | Chr3:69386055-69386074 | MsG0380015384.01.T01:CDS | 40.0% | |
ACGGCTATTCTTGTTCTCTA+TGG | + | Chr3:69387635-69387654 | MsG0380015384.01.T01:CDS | 40.0% | |
ACTGACCAGTCAAACGAATA+TGG | - | Chr3:69388400-69388419 | None:intergenic | 40.0% | |
ATCACATGCCAGAAACAAGA+GGG | + | Chr3:69387398-69387417 | MsG0380015384.01.T01:CDS | 40.0% | |
ATTGGATCCAATAGAGGAAG+GGG | + | Chr3:69385021-69385040 | MsG0380015384.01.T01:CDS | 40.0% | |
CCACATATTCTGTTATGCGA+TGG | - | Chr3:69386044-69386063 | None:intergenic | 40.0% | |
CCATCGCATAACAGAATATG+TGG | + | Chr3:69386041-69386060 | MsG0380015384.01.T01:CDS | 40.0% | |
CCGTAAGAGATGGATAAAAG+AGG | - | Chr3:69386363-69386382 | None:intergenic | 40.0% | |
CGAACTGTTTGCATTTCGAA+CGG | - | Chr3:69385284-69385303 | None:intergenic | 40.0% | |
CGTTCGAAATGCAAACAGTT+CGG | + | Chr3:69385282-69385301 | MsG0380015384.01.T01:intron | 40.0% | |
CTAATTGCTTGGTTTCTACC+AGG | + | Chr3:69387369-69387388 | MsG0380015384.01.T01:intron | 40.0% | |
CTTCCCTGACAAAGAAAACT+TGG | - | Chr3:69386404-69386423 | None:intergenic | 40.0% | |
CTTGAAGCAGAAGTTATGTC+AGG | + | Chr3:69388161-69388180 | MsG0380015384.01.T01:CDS | 40.0% | |
CTTTCACACCCTTGCATATA+TGG | + | Chr3:69384578-69384597 | MsG0380015384.01.T01:CDS | 40.0% | |
GAAAATTAGTACCTACCTGC+TGG | - | Chr3:69385505-69385524 | None:intergenic | 40.0% | |
GAAAATTTACCTGTATCCGC+GGG | - | Chr3:69385706-69385725 | None:intergenic | 40.0% | |
GAGAAGAATCATTGGCAATC+TGG | - | Chr3:69388307-69388326 | None:intergenic | 40.0% | |
GGAAAATTTACCTGTATCCG+CGG | - | Chr3:69385707-69385726 | None:intergenic | 40.0% | |
GGCAAACTTCACATTTAGGA+TGG | - | Chr3:69386462-69386481 | None:intergenic | 40.0% | |
GGGCGAAAGATACTTTAGAT+TGG | + | Chr3:69387101-69387120 | MsG0380015384.01.T01:CDS | 40.0% | |
GTCAGGTTCTTTCTTACATG+TGG | + | Chr3:69388138-69388157 | MsG0380015384.01.T01:CDS | 40.0% | |
GTTCAAAATCATGCGTTGAG+TGG | - | Chr3:69387824-69387843 | None:intergenic | 40.0% | |
GTTCTGTTTACCAAGGATCT+AGG | - | Chr3:69385102-69385121 | None:intergenic | 40.0% | |
TAAGGATATAGATGGCGAAC+GGG | + | Chr3:69385597-69385616 | MsG0380015384.01.T01:intron | 40.0% | |
TCGCATAACAGAATATGTGG+AGG | + | Chr3:69386044-69386063 | MsG0380015384.01.T01:CDS | 40.0% | |
TCTGATATATTTGTGGGTGC+AGG | + | Chr3:69387921-69387940 | MsG0380015384.01.T01:intron | 40.0% | |
TGACAGTCTGTTCTTCTGAA+AGG | - | Chr3:69387429-69387448 | None:intergenic | 40.0% | |
TGATTATGCAAAAGGACTCC+AGG | + | Chr3:69385629-69385648 | MsG0380015384.01.T01:CDS | 40.0% | |
TGCAACAAGGAGATACTCTA+TGG | + | Chr3:69386068-69386087 | MsG0380015384.01.T01:CDS | 40.0% | |
TGTTGTTGCACATGTCAAGT+TGG | + | Chr3:69385193-69385212 | MsG0380015384.01.T01:intron | 40.0% | |
TTACCTTCTCCTTGAAGTCT+CGG | + | Chr3:69387079-69387098 | MsG0380015384.01.T01:intron | 40.0% | |
TTCTCTTCCAACTAGAAGCA+TGG | - | Chr3:69387256-69387275 | None:intergenic | 40.0% | |
TTTCTTTGATGAGTAGGAGG+CGG | - | Chr3:69388237-69388256 | None:intergenic | 40.0% | |
! | GAACGTGGACCACAATTTTA+AGG | + | Chr3:69387840-69387859 | MsG0380015384.01.T01:intron | 40.0% |
! | TAAAAAGGTAAAGGAGCGCA+TGG | - | Chr3:69385681-69385700 | None:intergenic | 40.0% |
! | TCAACGCATGATTTTGAACG+TGG | + | Chr3:69387825-69387844 | MsG0380015384.01.T01:intron | 40.0% |
! | TCTCTTCCAACTAGAAGCAT+GGG | - | Chr3:69387255-69387274 | None:intergenic | 40.0% |
!! | GTCATTGGTTCTGTTTACCA+AGG | - | Chr3:69385109-69385128 | None:intergenic | 40.0% |
AGGATAACCGTGCTAGAACT+AGG | + | Chr3:69385419-69385438 | MsG0380015384.01.T01:intron | 45.0% | |
CAAATCCCCATGCTTCTAGT+TGG | + | Chr3:69387246-69387265 | MsG0380015384.01.T01:CDS | 45.0% | |
CACACGAGTTAATGCATGGT+TGG | + | Chr3:69387966-69387985 | MsG0380015384.01.T01:CDS | 45.0% | |
CATCACATGCCAGAAACAAG+AGG | + | Chr3:69387397-69387416 | MsG0380015384.01.T01:CDS | 45.0% | |
CATGCATTAACTCGTGTGCA+AGG | - | Chr3:69387964-69387983 | None:intergenic | 45.0% | |
CTCGACCATATTCGTTTGAC+TGG | + | Chr3:69388392-69388411 | MsG0380015384.01.T01:CDS | 45.0% | |
CTGTAGACGAAAACATGGCT+TGG | + | Chr3:69385067-69385086 | MsG0380015384.01.T01:CDS | 45.0% | |
CTGTTTACCAAGGATCTAGG+CGG | - | Chr3:69385099-69385118 | None:intergenic | 45.0% | |
CTTGCACACGAGTTAATGCA+TGG | + | Chr3:69387962-69387981 | MsG0380015384.01.T01:CDS | 45.0% | |
GATTCTTCTCCAGCTTATGG+CGG | + | Chr3:69388317-69388336 | MsG0380015384.01.T01:CDS | 45.0% | |
GCAACCTGTAGACGAAAACA+TGG | + | Chr3:69385062-69385081 | MsG0380015384.01.T01:CDS | 45.0% | |
GCACTTAATGAAGCCATCGT+CGG | + | Chr3:69387276-69387295 | MsG0380015384.01.T01:CDS | 45.0% | |
GCCTCAACACACATTTACAC+AGG | + | Chr3:69386234-69386253 | MsG0380015384.01.T01:intron | 45.0% | |
GCCTCCTACTCATCAAAGAA+AGG | + | Chr3:69388236-69388255 | MsG0380015384.01.T01:CDS | 45.0% | |
GCCTGTGTAAATGTGTGTTG+AGG | - | Chr3:69386238-69386257 | None:intergenic | 45.0% | |
GCCTTTCTTTGATGAGTAGG+AGG | - | Chr3:69388240-69388259 | None:intergenic | 45.0% | |
GGTAGAAGAAGAAGAAGCTG+CGG | - | Chr3:69388213-69388232 | None:intergenic | 45.0% | |
TAACCGTGCTAGAACTAGGA+AGG | + | Chr3:69385423-69385442 | MsG0380015384.01.T01:CDS | 45.0% | |
TACCTTCTCCTTGAAGTCTC+GGG | + | Chr3:69387080-69387099 | MsG0380015384.01.T01:intron | 45.0% | |
TAGAACTAGGAAGGAGGAAG+AGG | + | Chr3:69385432-69385451 | MsG0380015384.01.T01:CDS | 45.0% | |
TCATACTCAGAGAGGAAGTC+TGG | + | Chr3:69384967-69384986 | MsG0380015384.01.T01:CDS | 45.0% | |
TCATCCTATTACTGAGCGTG+AGG | + | Chr3:69386154-69386173 | MsG0380015384.01.T01:CDS | 45.0% | |
TTGTTCTCTATGGTCTTCCG+AGG | + | Chr3:69387645-69387664 | MsG0380015384.01.T01:CDS | 45.0% | |
! | AGGCATAACCCTCTTGTTTC+TGG | - | Chr3:69387409-69387428 | None:intergenic | 45.0% |
! | AGTAGAGGAAGGTATGTGTC+AGG | + | Chr3:69388121-69388140 | MsG0380015384.01.T01:CDS | 45.0% |
! | AGTATAGGTGTCACCCCTAT+TGG | + | Chr3:69386893-69386912 | MsG0380015384.01.T01:CDS | 45.0% |
! | CAAGCCATGTTTTCGTCTAC+AGG | - | Chr3:69385069-69385088 | None:intergenic | 45.0% |
! | CATGGTTGGTTACGCCTTAA+AGG | + | Chr3:69387980-69387999 | MsG0380015384.01.T01:CDS | 45.0% |
! | CCTTTACCTTTTTATCCCCG+CGG | + | Chr3:69385687-69385706 | MsG0380015384.01.T01:CDS | 45.0% |
! | CTCTTCCAACTAGAAGCATG+GGG | - | Chr3:69387254-69387273 | None:intergenic | 45.0% |
!! | CTCTTGTTTCTGGCATGTGA+TGG | - | Chr3:69387399-69387418 | None:intergenic | 45.0% |
!! | TGCAATTTTGGTGGGAAGCA+GGG | + | Chr3:69384932-69384951 | MsG0380015384.01.T01:intron | 45.0% |
!! | TTGCAATTTTGGTGGGAAGC+AGG | + | Chr3:69384931-69384950 | MsG0380015384.01.T01:intron | 45.0% |
ACCTTCTCCTTGAAGTCTCG+GGG | + | Chr3:69387081-69387100 | MsG0380015384.01.T01:intron | 50.0% | |
CAACCTTGATCCTGCAGTAG+AGG | + | Chr3:69388106-69388125 | MsG0380015384.01.T01:CDS | 50.0% | |
CACATACCTTCCTCTACTGC+AGG | - | Chr3:69388119-69388138 | None:intergenic | 50.0% | |
CCGCGGGGATAAAAAGGTAA+AGG | - | Chr3:69385690-69385709 | None:intergenic | 50.0% | |
CGCGCCTTTCTTTGATGAGT+AGG | - | Chr3:69388243-69388262 | None:intergenic | 50.0% | |
CTACTGCAGGATCAAGGTTG+CGG | - | Chr3:69388106-69388125 | None:intergenic | 50.0% | |
CTGTATCCGCGGGGATAAAA+AGG | - | Chr3:69385696-69385715 | None:intergenic | 50.0% | |
CTTCCTCTACTGCAGGATCA+AGG | - | Chr3:69388112-69388131 | None:intergenic | 50.0% | |
CTTGATCCTGCAGTAGAGGA+AGG | + | Chr3:69388110-69388129 | MsG0380015384.01.T01:CDS | 50.0% | |
TACCTTCTTCTCTCCGACGA+TGG | - | Chr3:69387292-69387311 | None:intergenic | 50.0% | |
! | AAAGGTAAAGGAGCGCATGG+AGG | - | Chr3:69385678-69385697 | None:intergenic | 50.0% |
! | AAGGTAAAGGAGCGCATGGA+GGG | - | Chr3:69385677-69385696 | None:intergenic | 50.0% |
! | CTTTTTATCCCCGCGGATAC+AGG | + | Chr3:69385694-69385713 | MsG0380015384.01.T01:CDS | 50.0% |
!! | CCTCCTTCCTAGTTCTAGCA+CGG | - | Chr3:69385429-69385448 | None:intergenic | 50.0% |
!! | GCAATTTTGGTGGGAAGCAG+GGG | + | Chr3:69384933-69384952 | MsG0380015384.01.T01:intron | 50.0% |
AGCCATCGTCGGAGAGAAGA+AGG | + | Chr3:69387287-69387306 | MsG0380015384.01.T01:CDS | 55.0% | |
CCGTGCTAGAACTAGGAAGG+AGG | + | Chr3:69385426-69385445 | MsG0380015384.01.T01:CDS | 55.0% | |
CTAAAGCCTCCGCCATAAGC+TGG | - | Chr3:69388329-69388348 | None:intergenic | 55.0% | |
CTTTGATGAGTAGGAGGCGG+AGG | - | Chr3:69388234-69388253 | None:intergenic | 55.0% | |
GAAGCTGCGGCTGATGTTGA+TGG | - | Chr3:69388200-69388219 | None:intergenic | 55.0% | |
GAGATGAGTGCATGCGATCC+TGG | - | Chr3:69385650-69385669 | None:intergenic | 55.0% | |
GAGTGACACCGAAAGCAGTC+TGG | - | Chr3:69386128-69386147 | None:intergenic | 55.0% | |
GGATCCAATAGAGGAAGGGG+TGG | + | Chr3:69385024-69385043 | MsG0380015384.01.T01:CDS | 55.0% | |
TCCAATAGAGGAAGGGGTGG+CGG | + | Chr3:69385027-69385046 | MsG0380015384.01.T01:CDS | 55.0% | |
TCTTCTCCAGCTTATGGCGG+AGG | + | Chr3:69388320-69388339 | MsG0380015384.01.T01:CDS | 55.0% | |
TCTTTCGCCCCGAGACTTCA+AGG | - | Chr3:69387091-69387110 | None:intergenic | 55.0% | |
TGTGGGTGCAGGTTACTCAC+AGG | + | Chr3:69387932-69387951 | MsG0380015384.01.T01:intron | 55.0% | |
! | CAGCTTATGGCGGAGGCTTT+AGG | + | Chr3:69388327-69388346 | MsG0380015384.01.T01:CDS | 55.0% |
! | CTGGCATGTGATGGAAACCC+TGG | - | Chr3:69387390-69387409 | None:intergenic | 55.0% |
ACCGCCACCCCTTCCTCTAT+TGG | - | Chr3:69385031-69385050 | None:intergenic | 60.0% | |
GCCCCGAGACTTCAAGGAGA+AGG | - | Chr3:69387085-69387104 | None:intergenic | 60.0% | |
GCGAGCTCCGCCTAGATCCT+TGG | + | Chr3:69385089-69385108 | MsG0380015384.01.T01:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr3 | gene | 69384548 | 69388430 | 69384548 | ID=MsG0380015384.01;Name=MsG0380015384.01 |
Chr3 | mRNA | 69384548 | 69388430 | 69384548 | ID=MsG0380015384.01.T01;Parent=MsG0380015384.01;Name=MsG0380015384.01.T01;_AED=0.37;_eAED=0.37;_QI=0|0|0|1|0.9|0.81|11|0|485 |
Chr3 | exon | 69384548 | 69384599 | 69384548 | ID=MsG0380015384.01.T01:exon:23472;Parent=MsG0380015384.01.T01 |
Chr3 | exon | 69384950 | 69385110 | 69384950 | ID=MsG0380015384.01.T01:exon:23473;Parent=MsG0380015384.01.T01 |
Chr3 | exon | 69385421 | 69385508 | 69385421 | ID=MsG0380015384.01.T01:exon:23474;Parent=MsG0380015384.01.T01 |
Chr3 | exon | 69385601 | 69385715 | 69385601 | ID=MsG0380015384.01.T01:exon:23475;Parent=MsG0380015384.01.T01 |
Chr3 | exon | 69386037 | 69386175 | 69386037 | ID=MsG0380015384.01.T01:exon:23476;Parent=MsG0380015384.01.T01 |
Chr3 | exon | 69386865 | 69386984 | 69386865 | ID=MsG0380015384.01.T01:exon:23477;Parent=MsG0380015384.01.T01 |
Chr3 | exon | 69387096 | 69387308 | 69387096 | ID=MsG0380015384.01.T01:exon:23478;Parent=MsG0380015384.01.T01 |
Chr3 | exon | 69387391 | 69387453 | 69387391 | ID=MsG0380015384.01.T01:exon:23479;Parent=MsG0380015384.01.T01 |
Chr3 | exon | 69387551 | 69387666 | 69387551 | ID=MsG0380015384.01.T01:exon:23480;Parent=MsG0380015384.01.T01 |
Chr3 | exon | 69387943 | 69388001 | 69387943 | ID=MsG0380015384.01.T01:exon:23481;Parent=MsG0380015384.01.T01 |
Chr3 | exon | 69388099 | 69388430 | 69388099 | ID=MsG0380015384.01.T01:exon:23482;Parent=MsG0380015384.01.T01 |
Chr3 | CDS | 69384548 | 69384599 | 69384548 | ID=MsG0380015384.01.T01:cds;Parent=MsG0380015384.01.T01 |
Chr3 | CDS | 69384950 | 69385110 | 69384950 | ID=MsG0380015384.01.T01:cds;Parent=MsG0380015384.01.T01 |
Chr3 | CDS | 69385421 | 69385508 | 69385421 | ID=MsG0380015384.01.T01:cds;Parent=MsG0380015384.01.T01 |
Chr3 | CDS | 69385601 | 69385715 | 69385601 | ID=MsG0380015384.01.T01:cds;Parent=MsG0380015384.01.T01 |
Chr3 | CDS | 69386037 | 69386175 | 69386037 | ID=MsG0380015384.01.T01:cds;Parent=MsG0380015384.01.T01 |
Chr3 | CDS | 69386865 | 69386984 | 69386865 | ID=MsG0380015384.01.T01:cds;Parent=MsG0380015384.01.T01 |
Chr3 | CDS | 69387096 | 69387308 | 69387096 | ID=MsG0380015384.01.T01:cds;Parent=MsG0380015384.01.T01 |
Chr3 | CDS | 69387391 | 69387453 | 69387391 | ID=MsG0380015384.01.T01:cds;Parent=MsG0380015384.01.T01 |
Chr3 | CDS | 69387551 | 69387666 | 69387551 | ID=MsG0380015384.01.T01:cds;Parent=MsG0380015384.01.T01 |
Chr3 | CDS | 69387943 | 69388001 | 69387943 | ID=MsG0380015384.01.T01:cds;Parent=MsG0380015384.01.T01 |
Chr3 | CDS | 69388099 | 69388430 | 69388099 | ID=MsG0380015384.01.T01:cds;Parent=MsG0380015384.01.T01 |
Gene Sequence |
Protein sequence |