Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580028398.01.T01 | XP_003615624.1 | 89.726 | 146 | 15 | 0 | 27 | 172 | 18 | 163 | 2.67E-91 | 279 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580028398.01.T01 | K4D3U9 | 56.41 | 117 | 50 | 1 | 56 | 172 | 45 | 160 | 2.65E-41 | 144 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580028398.01.T01 | G7K6E4 | 89.726 | 146 | 15 | 0 | 27 | 172 | 18 | 163 | 1.28e-91 | 279 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048969.01 | MsG0580028398.01 | 0.807459 | 5.003889e-50 | 2.788668e-47 |
| MsG0080048992.01 | MsG0580028398.01 | 0.825127 | 5.552794e-54 | 5.016801e-51 |
| MsG0080049016.01 | MsG0580028398.01 | 0.849519 | 3.070677e-60 | 5.836080e-57 |
| MsG0080049018.01 | MsG0580028398.01 | 0.839039 | 2.010550e-57 | 2.742656e-54 |
| MsG0080049023.01 | MsG0580028398.01 | 0.830502 | 2.833166e-55 | 2.990318e-52 |
| MsG0180000127.01 | MsG0580028398.01 | 0.814125 | 1.806531e-51 | 1.201912e-48 |
| MsG0180000719.01 | MsG0580028398.01 | 0.813697 | 2.245047e-51 | 1.476453e-48 |
| MsG0180000786.01 | MsG0580028398.01 | 0.802643 | 5.088695e-49 | 2.505728e-46 |
| MsG0180001054.01 | MsG0580028398.01 | 0.807467 | 4.982355e-50 | 2.777341e-47 |
| MsG0180001523.01 | MsG0580028398.01 | 0.825651 | 4.172123e-54 | 3.826071e-51 |
| MsG0180001615.01 | MsG0580028398.01 | 0.887263 | 1.663672e-72 | 1.228517e-68 |
| MsG0180001907.01 | MsG0580028398.01 | 0.813626 | 2.327400e-51 | 1.527681e-48 |
| MsG0180002891.01 | MsG0580028398.01 | 0.857711 | 1.354711e-62 | 3.374344e-59 |
| MsG0180003503.01 | MsG0580028398.01 | 0.834689 | 2.592719e-56 | 3.099516e-53 |
| MsG0180005338.01 | MsG0580028398.01 | 0.835523 | 1.596761e-56 | 1.957504e-53 |
| MsG0180005767.01 | MsG0580028398.01 | 0.816892 | 4.374005e-52 | 3.138122e-49 |
| MsG0180005854.01 | MsG0580028398.01 | 0.800835 | 1.195919e-48 | 5.624992e-46 |
| MsG0180005991.01 | MsG0580028398.01 | 0.842010 | 3.356727e-58 | 5.021157e-55 |
| MsG0180006063.01 | MsG0580028398.01 | 0.804153 | 2.476993e-49 | 1.267826e-46 |
| MsG0280011020.01 | MsG0580028398.01 | 0.839506 | 1.521153e-57 | 2.105073e-54 |
| MsG0280011036.01 | MsG0580028398.01 | 0.824724 | 6.913660e-54 | 6.175253e-51 |
| MsG0280011066.01 | MsG0580028398.01 | 0.826920 | 2.081424e-54 | 1.979344e-51 |
| MsG0280011169.01 | MsG0580028398.01 | 0.869175 | 3.770063e-66 | 1.401530e-62 |
| MsG0280011207.01 | MsG0580028398.01 | 0.846426 | 2.188210e-59 | 3.765203e-56 |
| MsG0280011309.01 | MsG0580028398.01 | 0.802721 | 4.905828e-49 | 2.420558e-46 |
| MsG0280011470.01 | MsG0580028398.01 | 0.829131 | 6.112089e-55 | 6.199400e-52 |
| MsG0380012583.01 | MsG0580028398.01 | 0.818703 | 1.707181e-52 | 1.287207e-49 |
| MsG0380012931.01 | MsG0580028398.01 | 0.871261 | 7.821243e-67 | 3.134803e-63 |
| MsG0380014129.01 | MsG0580028398.01 | 0.814690 | 1.355287e-51 | 9.155724e-49 |
| MsG0380014144.01 | MsG0580028398.01 | 0.820891 | 5.397820e-53 | 4.325266e-50 |
| MsG0380014646.01 | MsG0580028398.01 | 0.826011 | 3.427586e-54 | 3.175744e-51 |
| MsG0480019693.01 | MsG0580028398.01 | 0.815436 | 9.256118e-52 | 6.381341e-49 |
| MsG0480020550.01 | MsG0580028398.01 | 0.818215 | 2.201896e-52 | 1.638040e-49 |
| MsG0480020838.01 | MsG0580028398.01 | 0.800944 | 1.136502e-48 | 5.360386e-46 |
| MsG0480021109.01 | MsG0580028398.01 | 0.822863 | 1.886718e-53 | 1.598421e-50 |
| MsG0480021151.01 | MsG0580028398.01 | 0.841104 | 5.817455e-58 | 8.458539e-55 |
| MsG0480021474.01 | MsG0580028398.01 | 0.801489 | 8.791461e-49 | 4.203880e-46 |
| MsG0480021563.01 | MsG0580028398.01 | 0.867840 | 1.016888e-65 | 3.600921e-62 |
| MsG0480021892.01 | MsG0580028398.01 | 0.882021 | 1.477178e-70 | 8.853854e-67 |
| MsG0480021895.01 | MsG0580028398.01 | 0.839791 | 1.282738e-57 | 1.790737e-54 |
| MsG0480021999.01 | MsG0580028398.01 | 0.828743 | 7.585934e-55 | 7.606628e-52 |
| MsG0480022002.01 | MsG0580028398.01 | 0.841039 | 6.051879e-58 | 8.782034e-55 |
| MsG0480022150.01 | MsG0580028398.01 | 0.811429 | 7.033837e-51 | 4.353023e-48 |
| MsG0480022935.01 | MsG0580028398.01 | 0.833161 | 6.253090e-56 | 7.141755e-53 |
| MsG0480023386.01 | MsG0580028398.01 | 0.813273 | 2.782503e-51 | 1.808886e-48 |
| MsG0480023577.01 | MsG0580028398.01 | 0.841972 | 3.435819e-58 | 5.133368e-55 |
| MsG0480023708.01 | MsG0580028398.01 | 0.837861 | 4.049638e-57 | 5.329563e-54 |
| MsG0480023998.01 | MsG0580028398.01 | 0.802817 | 4.686942e-49 | 2.318281e-46 |
| MsG0580024201.01 | MsG0580028398.01 | 0.812990 | 3.210239e-51 | 2.071052e-48 |
| MsG0580024538.01 | MsG0580028398.01 | 0.845636 | 3.589380e-59 | 6.019777e-56 |
| MsG0580024688.01 | MsG0580028398.01 | 0.810153 | 1.327951e-50 | 7.945022e-48 |
| MsG0580024763.01 | MsG0580028398.01 | 0.818360 | 2.041101e-52 | 1.524682e-49 |
| MsG0580024766.01 | MsG0580028398.01 | 0.814050 | 1.876992e-51 | 1.246234e-48 |
| MsG0580024768.01 | MsG0580028398.01 | 0.848867 | 4.660401e-60 | 8.672989e-57 |
| MsG0580024820.01 | MsG0580028398.01 | 0.800896 | 1.162155e-48 | 5.474845e-46 |
| MsG0380015384.01 | MsG0580028398.01 | 0.809183 | 2.145618e-50 | 1.251253e-47 |
| MsG0380015636.01 | MsG0580028398.01 | 0.815364 | 9.602811e-52 | 6.607164e-49 |
| MsG0380015828.01 | MsG0580028398.01 | 0.810056 | 1.393222e-50 | 8.314654e-48 |
| MsG0380016065.01 | MsG0580028398.01 | 0.839164 | 1.866896e-57 | 2.556362e-54 |
| MsG0380016066.01 | MsG0580028398.01 | 0.840410 | 8.844519e-58 | 1.258803e-54 |
| MsG0380016151.01 | MsG0580028398.01 | 0.846059 | 2.755399e-59 | 4.684747e-56 |
| MsG0380016492.01 | MsG0580028398.01 | 0.846056 | 2.759569e-59 | 4.691473e-56 |
| MsG0380016718.01 | MsG0580028398.01 | 0.801452 | 8.944185e-49 | 4.272939e-46 |
| MsG0380017227.01 | MsG0580028398.01 | 0.825726 | 4.005266e-54 | 3.680875e-51 |
| MsG0380017353.01 | MsG0580028398.01 | 0.841876 | 3.641537e-58 | 5.424476e-55 |
| MsG0380017385.01 | MsG0580028398.01 | 0.858363 | 8.674244e-63 | 2.208164e-59 |
| MsG0380017812.01 | MsG0580028398.01 | 0.806823 | 6.821852e-50 | 3.739466e-47 |
| MsG0480018088.01 | MsG0580028398.01 | 0.819645 | 1.041529e-52 | 8.061274e-50 |
| MsG0580027099.01 | MsG0580028398.01 | 0.805150 | 1.533492e-49 | 8.053381e-47 |
| MsG0580027331.01 | MsG0580028398.01 | 0.800137 | 1.659729e-48 | 7.669300e-46 |
| MsG0580028013.01 | MsG0580028398.01 | 0.923088 | 4.208992e-89 | 1.651881e-84 |
| MsG0580028177.01 | MsG0580028398.01 | 0.835295 | 1.823535e-56 | 2.220694e-53 |
| MsG0580028397.01 | MsG0580028398.01 | 0.938956 | 2.849606e-99 | 2.840529e-94 |
| MsG0580028398.01 | MsG0580028403.01 | 0.935622 | 6.346929e-97 | 5.167446e-92 |
| MsG0580028398.01 | MsG0580029480.01 | 0.812338 | 4.457818e-51 | 2.826892e-48 |
| MsG0580028398.01 | MsG0580029706.01 | 0.808094 | 3.665975e-50 | 2.077291e-47 |
| MsG0580028398.01 | MsG0680030644.01 | 0.820468 | 6.752439e-53 | 5.347396e-50 |
| MsG0580028398.01 | MsG0680031997.01 | 0.809120 | 2.213394e-50 | 1.288622e-47 |
| MsG0580028398.01 | MsG0680032000.01 | 0.848536 | 5.759126e-60 | 1.060257e-56 |
| MsG0580028398.01 | MsG0680032002.01 | 0.831767 | 1.384942e-55 | 1.517871e-52 |
| MsG0580028398.01 | MsG0680032003.01 | 0.840349 | 9.172474e-58 | 1.302923e-54 |
| MsG0580028398.01 | MsG0680033952.01 | 0.805908 | 1.063513e-49 | 5.695009e-47 |
| MsG0580028398.01 | MsG0680034724.01 | 0.809937 | 1.478152e-50 | 8.794068e-48 |
| MsG0580028398.01 | MsG0680035612.01 | 0.844731 | 6.305300e-59 | 1.027409e-55 |
| MsG0580028398.01 | MsG0780036584.01 | 0.821080 | 4.882965e-53 | 3.933503e-50 |
| MsG0580028398.01 | MsG0780036846.01 | 0.816289 | 5.972091e-52 | 4.214762e-49 |
| MsG0580028398.01 | MsG0780037458.01 | 0.813243 | 2.824253e-51 | 1.834485e-48 |
| MsG0580028398.01 | MsG0780037963.01 | 0.837556 | 4.849496e-57 | 6.322216e-54 |
| MsG0580028398.01 | MsG0780038381.01 | 0.819553 | 1.093389e-52 | 8.440955e-50 |
| MsG0580028398.01 | MsG0780039401.01 | 0.843443 | 1.396813e-58 | 2.185844e-55 |
| MsG0580028398.01 | MsG0780039508.01 | 0.802739 | 4.862084e-49 | 2.400114e-46 |
| MsG0580028398.01 | MsG0780039510.01 | 0.812578 | 3.951967e-51 | 2.521992e-48 |
| MsG0580028398.01 | MsG0780040154.01 | 0.823853 | 1.107521e-53 | 9.649150e-51 |
| MsG0580028398.01 | MsG0780040155.01 | 0.815837 | 7.533192e-52 | 5.250620e-49 |
| MsG0580028398.01 | MsG0780040530.01 | 0.806344 | 8.610713e-50 | 4.662357e-47 |
| MsG0580028398.01 | MsG0780040849.01 | 0.817698 | 2.880988e-52 | 2.113088e-49 |
| MsG0580028398.01 | MsG0780041002.01 | 0.815147 | 1.073108e-51 | 7.339268e-49 |
| MsG0580028398.01 | MsG0780041121.01 | 0.801199 | 1.007647e-48 | 4.783283e-46 |
| MsG0580028398.01 | MsG0780041218.01 | 0.802611 | 5.167285e-49 | 2.542384e-46 |
| MsG0580028398.01 | MsG0780041256.01 | 0.824376 | 8.346683e-54 | 7.379808e-51 |
| MsG0580028398.01 | MsG0780041617.01 | 0.826827 | 2.190913e-54 | 2.077611e-51 |
| MsG0580028398.01 | MsG0780041618.01 | 0.852125 | 5.668962e-61 | 1.172840e-57 |
| MsG0580028398.01 | MsG0780041807.01 | 0.813369 | 2.650552e-51 | 1.727749e-48 |
| MsG0580028398.01 | MsG0880041995.01 | 0.824692 | 7.034011e-54 | 6.277100e-51 |
| MsG0580028398.01 | MsG0880042030.01 | 0.815951 | 7.103549e-52 | 4.966839e-49 |
| MsG0580028398.01 | MsG0880042256.01 | 0.806760 | 7.034572e-50 | 3.849667e-47 |
| MsG0580028398.01 | MsG0880042690.01 | 0.807081 | 6.016130e-50 | 3.319824e-47 |
| MsG0580028398.01 | MsG0880043515.01 | 0.806801 | 6.896663e-50 | 3.778312e-47 |
| MsG0580028398.01 | MsG0880044105.01 | 0.801924 | 7.156634e-49 | 3.460057e-46 |
| MsG0580028398.01 | MsG0880044318.01 | 0.814643 | 1.387586e-51 | 9.362548e-49 |
| MsG0580028398.01 | MsG0880044453.01 | 0.816430 | 5.552840e-52 | 3.933571e-49 |
| MsG0580028398.01 | MsG0880044558.01 | 0.801372 | 9.290736e-49 | 4.429546e-46 |
| MsG0580028398.01 | MsG0880045373.01 | 0.819314 | 1.239310e-52 | 9.503148e-50 |
| MsG0580028398.01 | MsG0880045377.01 | 0.823709 | 1.197190e-53 | 1.038904e-50 |
| MsG0580028398.01 | MsG0880045378.01 | 0.822921 | 1.828569e-53 | 1.551709e-50 |
| MsG0580028398.01 | MsG0880045394.01 | 0.808376 | 3.192964e-50 | 1.822747e-47 |
| MsG0580028398.01 | MsG0880045400.01 | 0.870448 | 1.448474e-66 | 5.636657e-63 |
| MsG0580028398.01 | MsG0880045409.01 | 0.819442 | 1.159237e-52 | 8.921533e-50 |
| MsG0580028398.01 | MsG0880045423.01 | 0.828175 | 1.040171e-54 | 1.026048e-51 |
| MsG0580028398.01 | MsG0880045761.01 | 0.849626 | 2.866348e-60 | 5.467192e-57 |
| MsG0580028398.01 | MsG0880046160.01 | 0.858181 | 9.827625e-63 | 2.486653e-59 |
| MsG0580028398.01 | MsG0880046347.01 | 0.813958 | 1.966347e-51 | 1.302316e-48 |
| MsG0580028398.01 | MsG0880046406.01 | 0.807233 | 5.586357e-50 | 3.094982e-47 |
| MsG0580028398.01 | MsG0880046456.01 | 0.817057 | 4.016260e-52 | 2.894597e-49 |
| MsG0580028398.01 | MsG0880046574.01 | 0.858956 | 5.769866e-63 | 1.498750e-59 |
| MsG0580028398.01 | MsG0880046630.01 | 0.819096 | 1.389628e-52 | 1.059259e-49 |
| MsG0580028398.01 | MsG0880046968.01 | 0.868385 | 6.791470e-66 | 2.451979e-62 |
| MsG0580028398.01 | MsG0880046969.01 | 0.853210 | 2.777706e-61 | 5.956506e-58 |
| MsG0580028398.01 | MsG0880047107.01 | 0.847207 | 1.338231e-59 | 2.361005e-56 |
| MsG0580028398.01 | MsG0880047251.01 | 0.815251 | 1.017311e-51 | 6.977511e-49 |
| MsG0580028398.01 | MsG0880047660.01 | 0.866588 | 2.555506e-65 | 8.658852e-62 |
| MsG0280006534.01 | MsG0580028398.01 | 0.814272 | 1.676101e-51 | 1.119630e-48 |
| MsG0280007600.01 | MsG0580028398.01 | 0.822273 | 2.587797e-53 | 2.155842e-50 |
| MsG0280008233.01 | MsG0580028398.01 | 0.812172 | 4.846224e-51 | 3.059300e-48 |
| MsG0280008531.01 | MsG0580028398.01 | 0.808147 | 3.572920e-50 | 2.027368e-47 |
| MsG0280008939.01 | MsG0580028398.01 | 0.806241 | 9.050428e-50 | 4.887910e-47 |
| MsG0280010047.01 | MsG0580028398.01 | -0.804954 | 1.685580e-49 | 8.807890e-47 |
| MsG0280010455.01 | MsG0580028398.01 | 0.842439 | 2.584920e-58 | 3.919894e-55 |
| MsG0280010461.01 | MsG0580028398.01 | 0.834029 | 3.796449e-56 | 4.450248e-53 |
| MsG0280010523.01 | MsG0580028398.01 | 0.834230 | 3.380057e-56 | 3.985921e-53 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580028398.01.T01 | MTR_5g070210 | 89.726 | 146 | 15 | 0 | 27 | 172 | 18 | 163 | 3.24e-95 | 279 |
| MsG0580028398.01.T01 | MTR_5g070230 | 60.000 | 130 | 50 | 1 | 47 | 174 | 3 | 132 | 7.77e-53 | 167 |
| MsG0580028398.01.T01 | MTR_5g070250 | 61.017 | 59 | 22 | 1 | 115 | 172 | 20 | 78 | 8.97e-20 | 83.2 |
| MsG0580028398.01.T01 | MTR_8g073540 | 46.341 | 82 | 44 | 0 | 82 | 163 | 28 | 109 | 1.96e-17 | 79.0 |
| MsG0580028398.01.T01 | MTR_5g070270 | 50.000 | 98 | 34 | 6 | 31 | 117 | 23 | 116 | 2.81e-17 | 73.9 |
| MsG0580028398.01.T01 | MTR_1g095500 | 45.122 | 82 | 45 | 0 | 82 | 163 | 28 | 109 | 3.07e-17 | 78.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580028398.01.T01 | AT5G58770 | 64.516 | 93 | 33 | 0 | 83 | 175 | 73 | 165 | 2.38e-40 | 139 |
| MsG0580028398.01.T01 | AT5G58782 | 53.000 | 100 | 47 | 0 | 76 | 175 | 46 | 145 | 7.40e-30 | 111 |
| MsG0580028398.01.T01 | AT5G58782 | 53.000 | 100 | 47 | 0 | 76 | 175 | 64 | 163 | 1.11e-29 | 111 |
| MsG0580028398.01.T01 | AT5G58780 | 55.914 | 93 | 41 | 0 | 80 | 172 | 63 | 155 | 1.47e-28 | 108 |
| MsG0580028398.01.T01 | AT2G23400 | 48.958 | 96 | 49 | 0 | 80 | 175 | 63 | 158 | 2.30e-27 | 102 |
| MsG0580028398.01.T01 | AT2G23400 | 48.958 | 96 | 49 | 0 | 80 | 175 | 63 | 158 | 2.00e-26 | 102 |
| MsG0580028398.01.T01 | AT2G23410 | 49.474 | 95 | 47 | 1 | 82 | 175 | 65 | 159 | 2.26e-24 | 97.1 |
| MsG0580028398.01.T01 | AT5G58784 | 48.889 | 90 | 46 | 0 | 86 | 175 | 69 | 158 | 6.22e-24 | 95.9 |
| MsG0580028398.01.T01 | AT2G17570 | 47.561 | 82 | 43 | 0 | 87 | 168 | 39 | 120 | 1.80e-18 | 81.3 |
Find 55 sgRNAs with CRISPR-Local
Find 143 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGCATTCTCAACCGATAAT+TGG | 0.274745 | 5:-79965534 | MsG0580028398.01.T01:CDS |
| TAAGCATGTGGCGGTGATTA+TGG | 0.306230 | 5:-79965683 | MsG0580028398.01.T01:CDS |
| GTGTTATAGTTGGGGAATAA+AGG | 0.324367 | 5:-79965569 | MsG0580028398.01.T01:CDS |
| CTCATTCTCGATATTCTTCA+AGG | 0.331892 | 5:-79965831 | MsG0580028398.01.T01:CDS |
| TCCACTTTATTCTCCCTTTG+TGG | 0.349397 | 5:+79966801 | None:intergenic |
| TTATTCTCCCTTTGTGGCAG+TGG | 0.380490 | 5:+79966807 | None:intergenic |
| ATGGGAGGTGGGCAAAGATG+AGG | 0.382978 | 5:-79965654 | MsG0580028398.01.T01:CDS |
| GGTGAGGTTGTGTTATAGTT+GGG | 0.400487 | 5:-79965578 | MsG0580028398.01.T01:CDS |
| CTTAGGTCGAATCCAATTAT+CGG | 0.425110 | 5:+79965522 | None:intergenic |
| TGGCACTAACCACCCTCATC+GGG | 0.441704 | 5:-79965872 | MsG0580028398.01.T01:CDS |
| TGGTGAGGTTGTGTTATAGT+TGG | 0.451686 | 5:-79965579 | MsG0580028398.01.T01:CDS |
| CGGTGATTATGGACGGGAAT+GGG | 0.455731 | 5:-79965672 | MsG0580028398.01.T01:CDS |
| TGGGAGGTGGGCAAAGATGA+GGG | 0.455809 | 5:-79965653 | MsG0580028398.01.T01:CDS |
| GGGAGGTGGGCAAAGATGAG+GGG | 0.456021 | 5:-79965652 | MsG0580028398.01.T01:CDS |
| GTCGGGCAGAAATGAAGAAC+AGG | 0.464322 | 5:-79966766 | MsG0580028398.01.T01:CDS |
| GGAGGTGGGCAAAGATGAGG+GGG | 0.479875 | 5:-79965651 | MsG0580028398.01.T01:CDS |
| CGATAATTGGATTCGACCTA+AGG | 0.480618 | 5:-79965521 | MsG0580028398.01.T01:intron |
| CGCGGCAATAGTGACGCGTT+TGG | 0.485624 | 5:+79965801 | None:intergenic |
| CCGTCTGCGGGTCATGTAGC+CGG | 0.489572 | 5:-79965622 | MsG0580028398.01.T01:CDS |
| TTATGGACGGGAATGGGAGG+TGG | 0.493196 | 5:-79965666 | MsG0580028398.01.T01:CDS |
| GTGGAAGAGGTATATTTGTC+GGG | 0.501310 | 5:-79966783 | MsG0580028398.01.T01:CDS |
| AGCTCCGCTTGCAATTCCTC+TGG | 0.511293 | 5:+79965712 | None:intergenic |
| GCGGTGATTATGGACGGGAA+TGG | 0.517607 | 5:-79965673 | MsG0580028398.01.T01:CDS |
| AATGAAGCCACTGCCACAAA+GGG | 0.519137 | 5:-79966814 | MsG0580028398.01.T01:CDS |
| AGTGGAAGAGGTATATTTGT+CGG | 0.519530 | 5:-79966784 | MsG0580028398.01.T01:CDS |
| AAGGGAGAATAAAGTGGAAG+AGG | 0.530065 | 5:-79966796 | MsG0580028398.01.T01:CDS |
| CGGCTACATGACCCGCAGAC+GGG | 0.532986 | 5:+79965623 | None:intergenic |
| AATTTATTGTTCTTTCAAAG+AGG | 0.535873 | 5:+79965365 | None:intergenic |
| GCTTGCAATTCCTCTGGCAA+TGG | 0.544403 | 5:+79965718 | None:intergenic |
| GTGGCACTAACCACCCTCAT+CGG | 0.555506 | 5:-79965873 | MsG0580028398.01.T01:CDS |
| GTGAGGTTGTGTTATAGTTG+GGG | 0.555675 | 5:-79965577 | MsG0580028398.01.T01:CDS |
| ATAATCACCGCCACATGCTT+AGG | 0.560502 | 5:+79965685 | None:intergenic |
| TATGGACGGGAATGGGAGGT+GGG | 0.565954 | 5:-79965665 | MsG0580028398.01.T01:CDS |
| ATGTGGCGGTGATTATGGAC+GGG | 0.576395 | 5:-79965678 | MsG0580028398.01.T01:CDS |
| TGTAAAGTCGTTGAGAAGGA+TGG | 0.579930 | 5:-79965599 | MsG0580028398.01.T01:CDS |
| GGCTACATGACCCGCAGACG+GGG | 0.586275 | 5:+79965624 | None:intergenic |
| CATGTGGCGGTGATTATGGA+CGG | 0.587809 | 5:-79965679 | MsG0580028398.01.T01:CDS |
| GCCACAAAGGGAGAATAAAG+TGG | 0.593212 | 5:-79966802 | MsG0580028398.01.T01:CDS |
| CTGAAATTGAAGCACTAGAG+AGG | 0.594486 | 5:-79965342 | MsG0580028398.01.T01:CDS |
| TGATTATGGACGGGAATGGG+AGG | 0.615382 | 5:-79965669 | MsG0580028398.01.T01:CDS |
| AAATGAAGCCACTGCCACAA+AGG | 0.615796 | 5:-79966815 | MsG0580028398.01.T01:CDS |
| CCGGCTACATGACCCGCAGA+CGG | 0.616650 | 5:+79965622 | None:intergenic |
| CAAACGCGTCACTATTGCCG+CGG | 0.621205 | 5:-79965800 | MsG0580028398.01.T01:CDS |
| CCGGTGTAAAGTCGTTGAGA+AGG | 0.624155 | 5:-79965603 | MsG0580028398.01.T01:CDS |
| AGTCGTTGAGAAGGATGGTG+AGG | 0.625194 | 5:-79965594 | MsG0580028398.01.T01:CDS |
| GGAGCTGATGCCTAAGCATG+TGG | 0.626089 | 5:-79965695 | MsG0580028398.01.T01:CDS |
| AGAAATGGAGCCATTGCCAG+AGG | 0.635367 | 5:-79965728 | MsG0580028398.01.T01:CDS |
| GGTGGATGGGGAAACTTCCG+TGG | 0.636917 | 5:-79965764 | MsG0580028398.01.T01:CDS |
| CCTTCTCAACGACTTTACAC+CGG | 0.638232 | 5:+79965603 | None:intergenic |
| CACCTGATCCTGAAAAGCCG+CGG | 0.664185 | 5:+79965783 | None:intergenic |
| ATTGCCAGAGGAATTGCAAG+CGG | 0.666528 | 5:-79965716 | MsG0580028398.01.T01:CDS |
| GCTACATGACCCGCAGACGG+GGG | 0.669075 | 5:+79965625 | None:intergenic |
| GGCACTAACCACCCTCATCG+GGG | 0.674649 | 5:-79965871 | MsG0580028398.01.T01:CDS |
| GCACTAACCACCCTCATCGG+GGG | 0.680728 | 5:-79965870 | MsG0580028398.01.T01:CDS |
| GCTGATGCCTAAGCATGTGG+CGG | 0.712093 | 5:-79965692 | MsG0580028398.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAGTATGATTACAATAAA+TGG | - | Chr5:79965789-79965808 | MsG0580028398.01.T01:CDS | 15.0% |
| !!! | TTATTCTTAGTTTTGATTAT+TGG | - | Chr5:79966695-79966714 | MsG0580028398.01.T01:intron | 15.0% |
| !! | AATTTATTGTTCTTTCAAAG+AGG | + | Chr5:79966763-79966782 | None:intergenic | 20.0% |
| !! | TGTTAGTAATAATGTGAATA+TGG | + | Chr5:79966149-79966168 | None:intergenic | 20.0% |
| ! | AAATTAGAAAAGGGAATGAA+CGG | + | Chr5:79965988-79966007 | None:intergenic | 25.0% |
| ! | AAGCAATAAAAGAATGACTT+TGG | - | Chr5:79965483-79965502 | MsG0580028398.01.T01:intron | 25.0% |
| ! | ACATCGTAGAAATTAGAAAA+GGG | + | Chr5:79965997-79966016 | None:intergenic | 25.0% |
| ! | AGTGAAATTAAAATGACCTT+AGG | + | Chr5:79966623-79966642 | None:intergenic | 25.0% |
| ! | ATATATCTTAACAGTTCAGT+GGG | - | Chr5:79965820-79965839 | MsG0580028398.01.T01:CDS | 25.0% |
| ! | ATCACATTAGTTATTGATAG+TGG | - | Chr5:79966672-79966691 | MsG0580028398.01.T01:intron | 25.0% |
| ! | TACATCGTAGAAATTAGAAA+AGG | + | Chr5:79965998-79966017 | None:intergenic | 25.0% |
| ! | TATATATCTTAACAGTTCAG+TGG | - | Chr5:79965819-79965838 | MsG0580028398.01.T01:CDS | 25.0% |
| ! | TCATTAGTGATTGAAATCTA+CGG | - | Chr5:79965691-79965710 | MsG0580028398.01.T01:CDS | 25.0% |
| ! | TTTCTAATTTCTACGATGTA+GGG | - | Chr5:79965998-79966017 | MsG0580028398.01.T01:intron | 25.0% |
| !! | AAAAGAATGACTTTGGAAAT+AGG | - | Chr5:79965490-79965509 | MsG0580028398.01.T01:intron | 25.0% |
| !! | TCTTTTATTGCTTGCTTTAT+TGG | + | Chr5:79965476-79965495 | None:intergenic | 25.0% |
| !! | TTTTCTAATTTCTACGATGT+AGG | - | Chr5:79965997-79966016 | MsG0580028398.01.T01:intron | 25.0% |
| AATCTACGGCTATTATTCAT+TGG | - | Chr5:79965705-79965724 | MsG0580028398.01.T01:CDS | 30.0% | |
| ACGTAGTAATGTAGTTTAGT+AGG | + | Chr5:79966074-79966093 | None:intergenic | 30.0% | |
| AGGCTAACATTATGATATGA+AGG | - | Chr5:79965564-79965583 | MsG0580028398.01.T01:CDS | 30.0% | |
| CCTTAATAAGAAAAAGCGAT+TGG | - | Chr5:79965432-79965451 | MsG0580028398.01.T01:intron | 30.0% | |
| CTAACATTATGATATGAAGG+TGG | - | Chr5:79965567-79965586 | MsG0580028398.01.T01:CDS | 30.0% | |
| GTTATAAGAGTTCTATCTAG+TGG | + | Chr5:79966195-79966214 | None:intergenic | 30.0% | |
| ! | ATGTGTTGTTGAAACTTGAT+TGG | + | Chr5:79966029-79966048 | None:intergenic | 30.0% |
| ! | TATGGTTAGTGATAACGATT+CGG | + | Chr5:79966131-79966150 | None:intergenic | 30.0% |
| !! | ATGACTTTGGAAATAGGTTT+TGG | - | Chr5:79965496-79965515 | MsG0580028398.01.T01:intron | 30.0% |
| !! | TCTAATTTTCTGGCATCTAA+AGG | - | Chr5:79965889-79965908 | MsG0580028398.01.T01:intron | 30.0% |
| !!! | CCAATCGCTTTTTCTTATTA+AGG | + | Chr5:79965435-79965454 | None:intergenic | 30.0% |
| !!! | GTTTTGATTATTGGTGTTAC+TGG | - | Chr5:79966704-79966723 | MsG0580028398.01.T01:intron | 30.0% |
| AAGACTATAAGAGCAGCAAT+TGG | - | Chr5:79965656-79965675 | MsG0580028398.01.T01:CDS | 35.0% | |
| ACCCTAAACCTAATCACTTT+AGG | + | Chr5:79965733-79965752 | None:intergenic | 35.0% | |
| AGACTATAAGAGCAGCAATT+GGG | - | Chr5:79965657-79965676 | MsG0580028398.01.T01:CDS | 35.0% | |
| CTCATTCTCGATATTCTTCA+AGG | - | Chr5:79966294-79966313 | MsG0580028398.01.T01:intron | 35.0% | |
| CTTAGGTCGAATCCAATTAT+CGG | + | Chr5:79966606-79966625 | None:intergenic | 35.0% | |
| GCCTAAAGTGATTAGGTTTA+GGG | - | Chr5:79965729-79965748 | MsG0580028398.01.T01:CDS | 35.0% | |
| GTGTTATAGTTGGGGAATAA+AGG | - | Chr5:79966556-79966575 | MsG0580028398.01.T01:intron | 35.0% | |
| TACTACTACCACTAAGTTAG+TGG | - | Chr5:79966233-79966252 | MsG0580028398.01.T01:intron | 35.0% | |
| TGTAATGTGTGCAAGTTAGT+TGG | - | Chr5:79965628-79965647 | MsG0580028398.01.T01:CDS | 35.0% | |
| TTGCATTCTCAACCGATAAT+TGG | - | Chr5:79966591-79966610 | MsG0580028398.01.T01:intron | 35.0% | |
| ! | AAGTGATTAGGTTTAGGGTT+TGG | - | Chr5:79965734-79965753 | MsG0580028398.01.T01:CDS | 35.0% |
| ! | AGTGGAAGAGGTATATTTGT+CGG | - | Chr5:79965341-79965360 | MsG0580028398.01.T01:CDS | 35.0% |
| ! | CAAGAGGTCTTCTAATTTTC+TGG | - | Chr5:79965879-79965898 | MsG0580028398.01.T01:intron | 35.0% |
| ! | GGGGAAGTTTGAAATTCAAA+TGG | - | Chr5:79965601-79965620 | MsG0580028398.01.T01:CDS | 35.0% |
| ! | TATGAAGGTGGTCCAATTTT+CGG | - | Chr5:79965579-79965598 | MsG0580028398.01.T01:CDS | 35.0% |
| ! | TTCTGAAAAATCTTCGTCCA+CGG | + | Chr5:79966381-79966400 | None:intergenic | 35.0% |
| !! | GGACGAAGATTTTTCAGAAA+TGG | - | Chr5:79966382-79966401 | MsG0580028398.01.T01:intron | 35.0% |
| !!! | AAATAGGTTTTGGTGATGTG+GGG | - | Chr5:79965506-79965525 | MsG0580028398.01.T01:intron | 35.0% |
| !!! | GAAATAGGTTTTGGTGATGT+GGG | - | Chr5:79965505-79965524 | MsG0580028398.01.T01:intron | 35.0% |
| AAGAGTTCTATCTAGTGGCA+TGG | + | Chr5:79966190-79966209 | None:intergenic | 40.0% | |
| AAGGGAGAATAAAGTGGAAG+AGG | - | Chr5:79965329-79965348 | MsG0580028398.01.T01:CDS | 40.0% | |
| ACAAACAGTGATTGTCTACG+TGG | - | Chr5:79965531-79965550 | MsG0580028398.01.T01:CDS | 40.0% | |
| AGAAGACCTCTTGTTCTACA+CGG | + | Chr5:79965872-79965891 | None:intergenic | 40.0% | |
| AGAGTTCTATCTAGTGGCAT+GGG | + | Chr5:79966189-79966208 | None:intergenic | 40.0% | |
| CGATAATTGGATTCGACCTA+AGG | - | Chr5:79966604-79966623 | MsG0580028398.01.T01:intron | 40.0% | |
| CGCCTAAAGTGATTAGGTTT+AGG | - | Chr5:79965728-79965747 | MsG0580028398.01.T01:CDS | 40.0% | |
| GAAATGAAGAACAGGAAGAG+TGG | - | Chr5:79965367-79965386 | MsG0580028398.01.T01:CDS | 40.0% | |
| GGTGAGGTTGTGTTATAGTT+GGG | - | Chr5:79966547-79966566 | MsG0580028398.01.T01:intron | 40.0% | |
| GTAGTAGTAGTCATCTTTGG+TGG | + | Chr5:79966222-79966241 | None:intergenic | 40.0% | |
| GTGAGGTTGTGTTATAGTTG+GGG | - | Chr5:79966548-79966567 | MsG0580028398.01.T01:intron | 40.0% | |
| GTGGTAGTAGTAGTCATCTT+TGG | + | Chr5:79966225-79966244 | None:intergenic | 40.0% | |
| TCCACTTTATTCTCCCTTTG+TGG | + | Chr5:79965327-79965346 | None:intergenic | 40.0% | |
| TGATTGTCTACGTGGAAAGA+TGG | - | Chr5:79965539-79965558 | MsG0580028398.01.T01:CDS | 40.0% | |
| TGGTGAGGTTGTGTTATAGT+TGG | - | Chr5:79966546-79966565 | MsG0580028398.01.T01:intron | 40.0% | |
| TGTAAAGTCGTTGAGAAGGA+TGG | - | Chr5:79966526-79966545 | MsG0580028398.01.T01:intron | 40.0% | |
| TTCAAACTTCCCCCGAAAAT+TGG | + | Chr5:79965594-79965613 | None:intergenic | 40.0% | |
| TTCTCAATCCTTCTCTTCTC+TGG | + | Chr5:79965406-79965425 | None:intergenic | 40.0% | |
| TTCTTTGCCTTGTAGCATGT+TGG | + | Chr5:79965927-79965946 | None:intergenic | 40.0% | |
| ! | ATGAAGGTGGTCCAATTTTC+GGG | - | Chr5:79965580-79965599 | MsG0580028398.01.T01:CDS | 40.0% |
| ! | CTGAAATTGAAGCACTAGAG+AGG | - | Chr5:79966783-79966802 | MsG0580028398.01.T01:CDS | 40.0% |
| ! | GATAACGATTCGGCTAATGT+GGG | + | Chr5:79966121-79966140 | None:intergenic | 40.0% |
| ! | GTGGAAGAGGTATATTTGTC+GGG | - | Chr5:79965342-79965361 | MsG0580028398.01.T01:CDS | 40.0% |
| ! | TGATAACGATTCGGCTAATG+TGG | + | Chr5:79966122-79966141 | None:intergenic | 40.0% |
| ! | TGATTAGGTTTAGGGTTTGG+AGG | - | Chr5:79965737-79965756 | MsG0580028398.01.T01:CDS | 40.0% |
| !!! | GGAAATAGGTTTTGGTGATG+TGG | - | Chr5:79965504-79965523 | MsG0580028398.01.T01:intron | 40.0% |
| ATAATCACCGCCACATGCTT+AGG | + | Chr5:79966443-79966462 | None:intergenic | 45.0% | |
| ATTGCCAGAGGAATTGCAAG+CGG | - | Chr5:79966409-79966428 | MsG0580028398.01.T01:intron | 45.0% | |
| CATTGGCGCCTAAAGTGATT+AGG | - | Chr5:79965722-79965741 | MsG0580028398.01.T01:CDS | 45.0% | |
| CCTTCTCAACGACTTTACAC+CGG | + | Chr5:79966525-79966544 | None:intergenic | 45.0% | |
| CTAATGTGGGAAATGGAAGG+TGG | + | Chr5:79966108-79966127 | None:intergenic | 45.0% | |
| CTGGCATCTAAAGGTTTCGT+AGG | - | Chr5:79965898-79965917 | MsG0580028398.01.T01:intron | 45.0% | |
| GATTCGGCTAATGTGGGAAA+TGG | + | Chr5:79966115-79966134 | None:intergenic | 45.0% | |
| GCCACAAAGGGAGAATAAAG+TGG | - | Chr5:79965323-79965342 | MsG0580028398.01.T01:CDS | 45.0% | |
| GTCTACGTGGAAAGATGGAA+AGG | - | Chr5:79965544-79965563 | MsG0580028398.01.T01:CDS | 45.0% | |
| TAAGCATGTGGCGGTGATTA+TGG | - | Chr5:79966442-79966461 | MsG0580028398.01.T01:intron | 45.0% | |
| TAGGACTCCAACATGCTACA+AGG | - | Chr5:79965917-79965936 | MsG0580028398.01.T01:intron | 45.0% | |
| TGTTACTGGTGATATGCAGG+TGG | - | Chr5:79966718-79966737 | MsG0580028398.01.T01:intron | 45.0% | |
| TTATTCTCCCTTTGTGGCAG+TGG | + | Chr5:79965321-79965340 | None:intergenic | 45.0% | |
| ! | GAACGGCTCTAATTAGGTGA+TGG | + | Chr5:79965971-79965990 | None:intergenic | 45.0% |
| ! | GGGAATGAACGGCTCTAATT+AGG | + | Chr5:79965977-79965996 | None:intergenic | 45.0% |
| ! | GGTTAGTGCCACTAACTTAG+TGG | + | Chr5:79966244-79966263 | None:intergenic | 45.0% |
| ! | TGAAGGTGGTCCAATTTTCG+GGG | - | Chr5:79965581-79965600 | MsG0580028398.01.T01:CDS | 45.0% |
| !! | CTTTTCAGGATCAGGTGGAT+GGG | - | Chr5:79966348-79966367 | MsG0580028398.01.T01:intron | 45.0% |
| !! | TGGTGTTACTGGTGATATGC+AGG | - | Chr5:79966715-79966734 | MsG0580028398.01.T01:intron | 45.0% |
| !! | TTTTCAGGATCAGGTGGATG+GGG | - | Chr5:79966349-79966368 | MsG0580028398.01.T01:intron | 45.0% |
| AGAAATGGAGCCATTGCCAG+AGG | - | Chr5:79966397-79966416 | MsG0580028398.01.T01:intron | 50.0% | |
| AGTCGTTGAGAAGGATGGTG+AGG | - | Chr5:79966531-79966550 | MsG0580028398.01.T01:intron | 50.0% | |
| ATCCAGCCGTGTAGAACAAG+AGG | - | Chr5:79965863-79965882 | MsG0580028398.01.T01:CDS | 50.0% | |
| ATGTGGCGGTGATTATGGAC+GGG | - | Chr5:79966447-79966466 | MsG0580028398.01.T01:intron | 50.0% | |
| CATGTGGCGGTGATTATGGA+CGG | - | Chr5:79966446-79966465 | MsG0580028398.01.T01:intron | 50.0% | |
| CCAAGAGTCCAGAGAAGAGA+AGG | - | Chr5:79965395-79965414 | MsG0580028398.01.T01:intron | 50.0% | |
| CCGGTGTAAAGTCGTTGAGA+AGG | - | Chr5:79966522-79966541 | MsG0580028398.01.T01:intron | 50.0% | |
| CCTTCTCTTCTCTGGACTCT+TGG | + | Chr5:79965398-79965417 | None:intergenic | 50.0% | |
| CGGCTAATGTGGGAAATGGA+AGG | + | Chr5:79966111-79966130 | None:intergenic | 50.0% | |
| CGGTGATTATGGACGGGAAT+GGG | - | Chr5:79966453-79966472 | MsG0580028398.01.T01:intron | 50.0% | |
| GCTTGCAATTCCTCTGGCAA+TGG | + | Chr5:79966410-79966429 | None:intergenic | 50.0% | |
| GTCGGGCAGAAATGAAGAAC+AGG | - | Chr5:79965359-79965378 | MsG0580028398.01.T01:CDS | 50.0% | |
| TGATTATGGACGGGAATGGG+AGG | - | Chr5:79966456-79966475 | MsG0580028398.01.T01:intron | 50.0% | |
| TGTTCTACACGGCTGGATGT+GGG | + | Chr5:79965861-79965880 | None:intergenic | 50.0% | |
| TTGTTCTACACGGCTGGATG+TGG | + | Chr5:79965862-79965881 | None:intergenic | 50.0% | |
| ! | GAAGGTGGTCCAATTTTCGG+GGG | - | Chr5:79965582-79965601 | MsG0580028398.01.T01:CDS | 50.0% |
| !! | GCTTTTCAGGATCAGGTGGA+TGG | - | Chr5:79966347-79966366 | MsG0580028398.01.T01:intron | 50.0% |
| AGCTCCGCTTGCAATTCCTC+TGG | + | Chr5:79966416-79966435 | None:intergenic | 55.0% | |
| ATCTGAGTGATCCCCCGATG+AGG | + | Chr5:79966269-79966288 | None:intergenic | 55.0% | |
| ATGGGAGGTGGGCAAAGATG+AGG | - | Chr5:79966471-79966490 | MsG0580028398.01.T01:intron | 55.0% | |
| CAAACGCGTCACTATTGCCG+CGG | - | Chr5:79966325-79966344 | MsG0580028398.01.T01:intron | 55.0% | |
| CACCTGATCCTGAAAAGCCG+CGG | + | Chr5:79966345-79966364 | None:intergenic | 55.0% | |
| GACCTCTTGTTCTACACGGC+TGG | + | Chr5:79965868-79965887 | None:intergenic | 55.0% | |
| GCGGTGATTATGGACGGGAA+TGG | - | Chr5:79966452-79966471 | MsG0580028398.01.T01:intron | 55.0% | |
| GCTGATGCCTAAGCATGTGG+CGG | - | Chr5:79966433-79966452 | MsG0580028398.01.T01:intron | 55.0% | |
| GGAGCTGATGCCTAAGCATG+TGG | - | Chr5:79966430-79966449 | MsG0580028398.01.T01:intron | 55.0% | |
| GTGGCACTAACCACCCTCAT+CGG | - | Chr5:79966252-79966271 | MsG0580028398.01.T01:intron | 55.0% | |
| TATGGACGGGAATGGGAGGT+GGG | - | Chr5:79966460-79966479 | MsG0580028398.01.T01:intron | 55.0% | |
| TCTGAGTGATCCCCCGATGA+GGG | + | Chr5:79966268-79966287 | None:intergenic | 55.0% | |
| TGGCACTAACCACCCTCATC+GGG | - | Chr5:79966253-79966272 | MsG0580028398.01.T01:intron | 55.0% | |
| TGGGAGGTGGGCAAAGATGA+GGG | - | Chr5:79966472-79966491 | MsG0580028398.01.T01:intron | 55.0% | |
| TTATGGACGGGAATGGGAGG+TGG | - | Chr5:79966459-79966478 | MsG0580028398.01.T01:intron | 55.0% | |
| ! | CACTATTGCCGCGGCTTTTC+AGG | - | Chr5:79966334-79966353 | MsG0580028398.01.T01:intron | 55.0% |
| CGCGGCAATAGTGACGCGTT+TGG | + | Chr5:79966327-79966346 | None:intergenic | 60.0% | |
| GCACTAACCACCCTCATCGG+GGG | - | Chr5:79966255-79966274 | MsG0580028398.01.T01:intron | 60.0% | |
| GGAGGTGGGCAAAGATGAGG+GGG | - | Chr5:79966474-79966493 | MsG0580028398.01.T01:intron | 60.0% | |
| GGCACTAACCACCCTCATCG+GGG | - | Chr5:79966254-79966273 | MsG0580028398.01.T01:intron | 60.0% | |
| GGGAGGTGGGCAAAGATGAG+GGG | - | Chr5:79966473-79966492 | MsG0580028398.01.T01:intron | 60.0% | |
| GGTGGATGGGGAAACTTCCG+TGG | - | Chr5:79966361-79966380 | MsG0580028398.01.T01:intron | 60.0% | |
| !! | CGCGGCTTTTCAGGATCAGG+TGG | - | Chr5:79966343-79966362 | MsG0580028398.01.T01:intron | 60.0% |
| !! | TGCCGCGGCTTTTCAGGATC+AGG | - | Chr5:79966340-79966359 | MsG0580028398.01.T01:intron | 60.0% |
| CCGGCTACATGACCCGCAGA+CGG | + | Chr5:79966506-79966525 | None:intergenic | 65.0% | |
| CCGTCTGCGGGTCATGTAGC+CGG | - | Chr5:79966503-79966522 | MsG0580028398.01.T01:intron | 65.0% | |
| CGGCTACATGACCCGCAGAC+GGG | + | Chr5:79966505-79966524 | None:intergenic | 65.0% | |
| GAGTGATCCCCCGATGAGGG+TGG | + | Chr5:79966265-79966284 | None:intergenic | 65.0% | |
| GCTACATGACCCGCAGACGG+GGG | + | Chr5:79966503-79966522 | None:intergenic | 65.0% | |
| GGCTACATGACCCGCAGACG+GGG | + | Chr5:79966504-79966523 | None:intergenic | 65.0% | |
| AGGGGGTTACCCCCGTCTGC+GGG | - | Chr5:79966491-79966510 | MsG0580028398.01.T01:intron | 70.0% | |
| GAGGGGGTTACCCCCGTCTG+CGG | - | Chr5:79966490-79966509 | MsG0580028398.01.T01:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr5 | gene | 79965312 | 79966835 | 79965312 | ID=MsG0580028398.01;Name=MsG0580028398.01 |
| Chr5 | mRNA | 79965312 | 79966835 | 79965312 | ID=MsG0580028398.01.T01;Parent=MsG0580028398.01;Name=MsG0580028398.01.T01;_AED=0.50;_eAED=0.64;_QI=0|0|0|1|0.5|0.33|3|0|181 |
| Chr5 | exon | 79966762 | 79966835 | 79966762 | ID=MsG0580028398.01.T01:exon:5766;Parent=MsG0580028398.01.T01 |
| Chr5 | exon | 79965522 | 79965894 | 79965522 | ID=MsG0580028398.01.T01:exon:5765;Parent=MsG0580028398.01.T01 |
| Chr5 | exon | 79965312 | 79965410 | 79965312 | ID=MsG0580028398.01.T01:exon:5764;Parent=MsG0580028398.01.T01 |
| Chr5 | CDS | 79966762 | 79966835 | 79966762 | ID=MsG0580028398.01.T01:cds;Parent=MsG0580028398.01.T01 |
| Chr5 | CDS | 79965522 | 79965894 | 79965522 | ID=MsG0580028398.01.T01:cds;Parent=MsG0580028398.01.T01 |
| Chr5 | CDS | 79965312 | 79965410 | 79965312 | ID=MsG0580028398.01.T01:cds;Parent=MsG0580028398.01.T01 |
| Gene Sequence |
| Protein sequence |
