Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580028397.01.T01 | XP_003615624.1 | 96.599 | 147 | 5 | 0 | 13 | 159 | 164 | 310 | 2.00E-99 | 298 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580028397.01.T01 | Q56Y11 | 70.139 | 144 | 43 | 0 | 15 | 158 | 165 | 308 | 3.98E-73 | 224 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580028397.01.T01 | G7K6E4 | 96.599 | 147 | 5 | 0 | 13 | 159 | 164 | 310 | 9.57e-100 | 298 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048887.01 | MsG0580028397.01 | 0.819981 | 8.728961e-53 | 6.820184e-50 |
| MsG0080048969.01 | MsG0580028397.01 | 0.821293 | 4.360078e-53 | 3.532876e-50 |
| MsG0080048992.01 | MsG0580028397.01 | 0.820182 | 7.849829e-53 | 6.167637e-50 |
| MsG0080049016.01 | MsG0580028397.01 | 0.845512 | 3.877575e-59 | 6.477354e-56 |
| MsG0080049018.01 | MsG0580028397.01 | 0.839382 | 1.638652e-57 | 2.259215e-54 |
| MsG0080049023.01 | MsG0580028397.01 | 0.848197 | 7.143286e-60 | 1.300585e-56 |
| MsG0180000127.01 | MsG0580028397.01 | 0.821683 | 3.544371e-53 | 2.903491e-50 |
| MsG0180000128.01 | MsG0580028397.01 | 0.802150 | 6.429602e-49 | 3.126536e-46 |
| MsG0180000423.01 | MsG0580028397.01 | 0.804818 | 1.799594e-49 | 9.370865e-47 |
| MsG0180000490.01 | MsG0580028397.01 | 0.850018 | 2.226153e-60 | 4.301204e-57 |
| MsG0180000491.01 | MsG0580028397.01 | 0.831369 | 1.735759e-55 | 1.879747e-52 |
| MsG0180000976.01 | MsG0580028397.01 | 0.819455 | 1.150941e-52 | 8.861389e-50 |
| MsG0180001054.01 | MsG0580028397.01 | 0.806610 | 7.568135e-50 | 4.125701e-47 |
| MsG0180001523.01 | MsG0580028397.01 | 0.812521 | 4.066118e-51 | 2.591042e-48 |
| MsG0180001615.01 | MsG0580028397.01 | 0.894404 | 2.547117e-75 | 2.528363e-71 |
| MsG0180001907.01 | MsG0580028397.01 | 0.838527 | 2.727227e-57 | 3.662786e-54 |
| MsG0180002891.01 | MsG0580028397.01 | 0.889868 | 1.647449e-73 | 1.352798e-69 |
| MsG0180003351.01 | MsG0580028397.01 | 0.819170 | 1.336779e-52 | 1.021037e-49 |
| MsG0180003352.01 | MsG0580028397.01 | 0.821798 | 3.334455e-53 | 2.740461e-50 |
| MsG0180003503.01 | MsG0580028397.01 | 0.850967 | 1.205598e-60 | 2.403000e-57 |
| MsG0180004662.01 | MsG0580028397.01 | 0.818258 | 2.152762e-52 | 1.603372e-49 |
| MsG0180004787.01 | MsG0580028397.01 | 0.802667 | 5.031428e-49 | 2.479024e-46 |
| MsG0180005338.01 | MsG0580028397.01 | 0.835191 | 1.936667e-56 | 2.350890e-53 |
| MsG0180005416.01 | MsG0580028397.01 | 0.828443 | 8.965202e-55 | 8.912715e-52 |
| MsG0180005672.01 | MsG0580028397.01 | 0.810397 | 1.176265e-50 | 7.082325e-48 |
| MsG0180005767.01 | MsG0580028397.01 | 0.834692 | 2.587408e-56 | 3.093423e-53 |
| MsG0180005854.01 | MsG0580028397.01 | 0.826246 | 3.013579e-54 | 2.810847e-51 |
| MsG0180005898.01 | MsG0580028397.01 | 0.813354 | 2.671127e-51 | 1.740410e-48 |
| MsG0180005991.01 | MsG0580028397.01 | 0.860320 | 2.242384e-63 | 6.104551e-60 |
| MsG0180006076.01 | MsG0580028397.01 | 0.803202 | 3.901100e-49 | 1.948523e-46 |
| MsG0180006239.01 | MsG0580028397.01 | 0.800620 | 1.323273e-48 | 6.189984e-46 |
| MsG0280010584.01 | MsG0580028397.01 | 0.835338 | 1.778904e-56 | 2.169059e-53 |
| MsG0280010905.01 | MsG0580028397.01 | 0.803075 | 4.145037e-49 | 2.063501e-46 |
| MsG0280010998.01 | MsG0580028397.01 | 0.801737 | 7.817669e-49 | 3.761602e-46 |
| MsG0280011020.01 | MsG0580028397.01 | 0.859152 | 5.038611e-63 | 1.317598e-59 |
| MsG0280011036.01 | MsG0580028397.01 | 0.823625 | 1.252381e-53 | 1.084106e-50 |
| MsG0280011066.01 | MsG0580028397.01 | 0.800183 | 1.624041e-48 | 7.513090e-46 |
| MsG0280011169.01 | MsG0580028397.01 | 0.863279 | 2.788642e-64 | 8.407635e-61 |
| MsG0280011207.01 | MsG0580028397.01 | 0.832405 | 9.629846e-56 | 1.075355e-52 |
| MsG0280011281.01 | MsG0580028397.01 | 0.817147 | 3.834796e-52 | 2.770498e-49 |
| MsG0280011389.01 | MsG0580028397.01 | 0.820927 | 5.295470e-53 | 4.247514e-50 |
| MsG0280011470.01 | MsG0580028397.01 | 0.804683 | 1.920494e-49 | 9.965054e-47 |
| MsG0380012583.01 | MsG0580028397.01 | 0.838947 | 2.124032e-57 | 2.889280e-54 |
| MsG0380012931.01 | MsG0580028397.01 | 0.865416 | 6.001774e-65 | 1.950984e-61 |
| MsG0380013501.01 | MsG0580028397.01 | 0.835117 | 2.022556e-56 | 2.449368e-53 |
| MsG0380014129.01 | MsG0580028397.01 | 0.805625 | 1.219688e-49 | 6.483899e-47 |
| MsG0380014144.01 | MsG0580028397.01 | 0.861562 | 9.403472e-64 | 2.671924e-60 |
| MsG0380014557.01 | MsG0580028397.01 | 0.801145 | 1.033677e-48 | 4.900263e-46 |
| MsG0380014646.01 | MsG0580028397.01 | 0.854162 | 1.478490e-61 | 3.272747e-58 |
| MsG0380014735.01 | MsG0580028397.01 | 0.811379 | 7.210041e-51 | 4.456083e-48 |
| MsG0480018658.01 | MsG0580028397.01 | 0.801250 | 9.836543e-49 | 4.675506e-46 |
| MsG0480019604.01 | MsG0580028397.01 | 0.808081 | 3.689837e-50 | 2.090033e-47 |
| MsG0480019693.01 | MsG0580028397.01 | 0.823016 | 1.738147e-53 | 1.478954e-50 |
| MsG0480019974.01 | MsG0580028397.01 | 0.800815 | 1.207540e-48 | 5.676474e-46 |
| MsG0480020269.01 | MsG0580028397.01 | 0.801208 | 1.003442e-48 | 4.764351e-46 |
| MsG0480020433.01 | MsG0580028397.01 | 0.802462 | 5.546852e-49 | 2.718798e-46 |
| MsG0480020550.01 | MsG0580028397.01 | 0.835989 | 1.216775e-56 | 1.512797e-53 |
| MsG0480020704.01 | MsG0580028397.01 | 0.822865 | 1.884632e-53 | 1.596728e-50 |
| MsG0480020797.01 | MsG0580028397.01 | -0.807996 | 3.847388e-50 | 2.174378e-47 |
| MsG0480021109.01 | MsG0580028397.01 | 0.838408 | 2.927319e-57 | 3.917287e-54 |
| MsG0480021111.01 | MsG0580028397.01 | 0.817968 | 2.503970e-52 | 1.850122e-49 |
| MsG0480021151.01 | MsG0580028397.01 | 0.834925 | 2.260557e-56 | 2.722192e-53 |
| MsG0480021420.01 | MsG0580028397.01 | 0.815576 | 8.615465e-52 | 5.962458e-49 |
| MsG0480021563.01 | MsG0580028397.01 | 0.836755 | 7.770484e-57 | 9.886638e-54 |
| MsG0480021892.01 | MsG0580028397.01 | 0.899315 | 2.237324e-77 | 2.751835e-73 |
| MsG0480021895.01 | MsG0580028397.01 | 0.836328 | 9.981990e-57 | 1.253960e-53 |
| MsG0480021999.01 | MsG0580028397.01 | 0.865018 | 8.001417e-65 | 2.565212e-61 |
| MsG0480022002.01 | MsG0580028397.01 | 0.865179 | 7.124913e-65 | 2.296937e-61 |
| MsG0480022150.01 | MsG0580028397.01 | 0.800219 | 1.597145e-48 | 7.395537e-46 |
| MsG0480022298.01 | MsG0580028397.01 | -0.806607 | 7.578443e-50 | 4.131056e-47 |
| MsG0480022411.01 | MsG0580028397.01 | 0.803193 | 3.918435e-49 | 1.956777e-46 |
| MsG0480022664.01 | MsG0580028397.01 | 0.812536 | 4.034941e-51 | 2.572263e-48 |
| MsG0480022935.01 | MsG0580028397.01 | 0.829929 | 3.909827e-55 | 4.059273e-52 |
| MsG0480023056.01 | MsG0580028397.01 | 0.811287 | 7.549345e-51 | 4.654374e-48 |
| MsG0480023104.01 | MsG0580028397.01 | 0.802141 | 6.456891e-49 | 3.139039e-46 |
| MsG0480023148.01 | MsG0580028397.01 | 0.831188 | 1.923009e-55 | 2.071341e-52 |
| MsG0480023244.01 | MsG0580028397.01 | 0.803802 | 2.929944e-49 | 1.486182e-46 |
| MsG0480023386.01 | MsG0580028397.01 | 0.845032 | 5.228807e-59 | 8.601513e-56 |
| MsG0480023577.01 | MsG0580028397.01 | 0.820356 | 7.162660e-53 | 5.654533e-50 |
| MsG0480023708.01 | MsG0580028397.01 | 0.819570 | 1.083738e-52 | 8.370632e-50 |
| MsG0580024087.01 | MsG0580028397.01 | -0.800756 | 1.241224e-48 | 5.826132e-46 |
| MsG0580024201.01 | MsG0580028397.01 | 0.822339 | 2.497562e-53 | 2.084649e-50 |
| MsG0580024386.01 | MsG0580028397.01 | 0.818822 | 1.603790e-52 | 1.213255e-49 |
| MsG0580024538.01 | MsG0580028397.01 | 0.853259 | 2.690127e-61 | 5.778196e-58 |
| MsG0580024567.01 | MsG0580028397.01 | 0.817505 | 3.185379e-52 | 2.324085e-49 |
| MsG0580024688.01 | MsG0580028397.01 | 0.812381 | 4.362985e-51 | 2.769855e-48 |
| MsG0580024763.01 | MsG0580028397.01 | 0.853947 | 1.705523e-61 | 3.748250e-58 |
| MsG0580024764.01 | MsG0580028397.01 | 0.805734 | 1.157207e-49 | 6.169404e-47 |
| MsG0580024766.01 | MsG0580028397.01 | 0.870842 | 1.074693e-66 | 4.242259e-63 |
| MsG0580024768.01 | MsG0580028397.01 | 0.855972 | 4.404606e-62 | 1.035101e-58 |
| MsG0580024820.01 | MsG0580028397.01 | 0.813817 | 2.111906e-51 | 1.393438e-48 |
| MsG0580025252.01 | MsG0580028397.01 | 0.814448 | 1.532652e-51 | 1.028681e-48 |
| MsG0580025301.01 | MsG0580028397.01 | 0.805534 | 1.274678e-49 | 6.760098e-47 |
| MsG0580025317.01 | MsG0580028397.01 | 0.817470 | 3.243126e-52 | 2.364045e-49 |
| MsG0580026050.01 | MsG0580028397.01 | 0.804413 | 2.186048e-49 | 1.126381e-46 |
| MsG0380014933.01 | MsG0580028397.01 | 0.809136 | 2.196235e-50 | 1.279176e-47 |
| MsG0380015349.01 | MsG0580028397.01 | -0.812828 | 3.483694e-51 | 2.237656e-48 |
| MsG0380015384.01 | MsG0580028397.01 | 0.815391 | 9.470330e-52 | 6.520863e-49 |
| MsG0380015636.01 | MsG0580028397.01 | 0.811245 | 7.709170e-51 | 4.747731e-48 |
| MsG0380015828.01 | MsG0580028397.01 | 0.823903 | 1.078204e-53 | 9.406759e-51 |
| MsG0380016065.01 | MsG0580028397.01 | 0.856033 | 4.228374e-62 | 9.957101e-59 |
| MsG0380016066.01 | MsG0580028397.01 | 0.851863 | 6.725609e-61 | 1.379682e-57 |
| MsG0380016151.01 | MsG0580028397.01 | 0.884832 | 1.369119e-71 | 9.171813e-68 |
| MsG0380016492.01 | MsG0580028397.01 | 0.839841 | 1.245052e-57 | 1.740765e-54 |
| MsG0380016723.01 | MsG0580028397.01 | 0.804289 | 2.320608e-49 | 1.191920e-46 |
| MsG0380016997.01 | MsG0580028397.01 | 0.841355 | 4.996890e-58 | 7.322970e-55 |
| MsG0380017056.01 | MsG0580028397.01 | 0.809954 | 1.465590e-50 | 8.723310e-48 |
| MsG0380017353.01 | MsG0580028397.01 | 0.879805 | 9.233738e-70 | 5.077488e-66 |
| MsG0380017385.01 | MsG0580028397.01 | 0.821887 | 3.179142e-53 | 2.619469e-50 |
| MsG0380017812.01 | MsG0580028397.01 | 0.812871 | 3.408458e-51 | 2.191872e-48 |
| MsG0380017918.01 | MsG0580028397.01 | 0.814440 | 1.539229e-51 | 1.032884e-48 |
| MsG0480018098.01 | MsG0580028397.01 | 0.801980 | 6.970608e-49 | 3.374753e-46 |
| MsG0480018100.01 | MsG0580028397.01 | 0.802018 | 6.845730e-49 | 3.317647e-46 |
| MsG0480018232.01 | MsG0580028397.01 | 0.803081 | 4.132490e-49 | 2.057613e-46 |
| MsG0480018330.01 | MsG0580028397.01 | 0.800182 | 1.625224e-48 | 7.518265e-46 |
| MsG0580026291.01 | MsG0580028397.01 | 0.809133 | 2.199832e-50 | 1.281146e-47 |
| MsG0580026362.01 | MsG0580028397.01 | 0.800574 | 1.352393e-48 | 6.318813e-46 |
| MsG0580027098.01 | MsG0580028397.01 | 0.803924 | 2.763206e-49 | 1.406130e-46 |
| MsG0580027331.01 | MsG0580028397.01 | 0.800643 | 1.309108e-48 | 6.127321e-46 |
| MsG0580028013.01 | MsG0580028397.01 | 0.970897 | 2.544413e-132 | 2.636832e-126 |
| MsG0580028159.01 | MsG0580028397.01 | 0.802135 | 6.476390e-49 | 3.148043e-46 |
| MsG0580028177.01 | MsG0580028397.01 | 0.847912 | 8.563268e-60 | 1.545226e-56 |
| MsG0580028179.01 | MsG0580028397.01 | 0.807827 | 4.178090e-50 | 2.350797e-47 |
| MsG0580028397.01 | MsG0580028398.01 | 0.938956 | 2.849606e-99 | 2.840529e-94 |
| MsG0580028397.01 | MsG0580028403.01 | 0.982238 | 1.397689e-154 | 3.894210e-148 |
| MsG0580028397.01 | MsG0580029706.01 | 0.808141 | 3.582496e-50 | 2.032515e-47 |
| MsG0580028397.01 | MsG0680031997.01 | 0.816543 | 5.239562e-52 | 3.723163e-49 |
| MsG0580028397.01 | MsG0680032000.01 | 0.863840 | 1.867136e-64 | 5.740487e-61 |
| MsG0580028397.01 | MsG0680032002.01 | 0.833501 | 5.143797e-56 | 5.934746e-53 |
| MsG0580028397.01 | MsG0680032003.01 | 0.867403 | 1.403894e-65 | 4.896271e-62 |
| MsG0580028397.01 | MsG0680032245.01 | 0.830662 | 2.588441e-55 | 2.745099e-52 |
| MsG0580028397.01 | MsG0680032308.01 | 0.822040 | 2.930268e-53 | 2.424785e-50 |
| MsG0580028397.01 | MsG0680034724.01 | 0.840095 | 1.068678e-57 | 1.506339e-54 |
| MsG0580028397.01 | MsG0680034729.01 | 0.831645 | 1.484188e-55 | 1.620556e-52 |
| MsG0580028397.01 | MsG0680035612.01 | 0.876284 | 1.578582e-68 | 7.608822e-65 |
| MsG0580028397.01 | MsG0680035665.01 | 0.809836 | 1.554185e-50 | 9.221924e-48 |
| MsG0580028397.01 | MsG0780036424.01 | 0.819506 | 1.120635e-52 | 8.640223e-50 |
| MsG0580028397.01 | MsG0780036583.01 | 0.822704 | 2.053976e-53 | 1.732285e-50 |
| MsG0580028397.01 | MsG0780036584.01 | 0.834822 | 2.400067e-56 | 2.881041e-53 |
| MsG0580028397.01 | MsG0780036846.01 | 0.837226 | 5.891165e-57 | 7.602214e-54 |
| MsG0580028397.01 | MsG0780037458.01 | 0.820695 | 5.986792e-53 | 4.770763e-50 |
| MsG0580028397.01 | MsG0780037963.01 | 0.853233 | 2.735720e-61 | 5.871156e-58 |
| MsG0580028397.01 | MsG0780038381.01 | 0.839937 | 1.174834e-57 | 1.647696e-54 |
| MsG0580028397.01 | MsG0780038834.01 | 0.802627 | 5.129756e-49 | 2.524902e-46 |
| MsG0580028397.01 | MsG0780038914.01 | -0.814815 | 1.271162e-51 | 8.616525e-49 |
| MsG0580028397.01 | MsG0780039256.01 | 0.818553 | 1.845890e-52 | 1.386121e-49 |
| MsG0580028397.01 | MsG0780039401.01 | 0.823160 | 1.608327e-53 | 1.374001e-50 |
| MsG0580028397.01 | MsG0780039510.01 | 0.805090 | 1.578739e-49 | 8.278009e-47 |
| MsG0580028397.01 | MsG0780039805.01 | 0.801125 | 1.043330e-48 | 4.943563e-46 |
| MsG0580028397.01 | MsG0780039986.01 | 0.830240 | 3.283688e-55 | 3.440018e-52 |
| MsG0580028397.01 | MsG0780040154.01 | 0.861876 | 7.536518e-64 | 2.164010e-60 |
| MsG0580028397.01 | MsG0780040155.01 | 0.855624 | 5.569655e-62 | 1.293767e-58 |
| MsG0580028397.01 | MsG0780040167.01 | 0.827074 | 1.912038e-54 | 1.826402e-51 |
| MsG0580028397.01 | MsG0780040175.01 | 0.830723 | 2.500418e-55 | 2.656651e-52 |
| MsG0580028397.01 | MsG0780040319.01 | 0.832873 | 7.374405e-56 | 8.350111e-53 |
| MsG0580028397.01 | MsG0780040413.01 | 0.811239 | 7.734813e-51 | 4.762724e-48 |
| MsG0580028397.01 | MsG0780040849.01 | 0.819994 | 8.667484e-53 | 6.774486e-50 |
| MsG0580028397.01 | MsG0780041002.01 | 0.851759 | 7.200145e-61 | 1.472297e-57 |
| MsG0580028397.01 | MsG0780041129.01 | 0.801292 | 9.644817e-49 | 4.589185e-46 |
| MsG0580028397.01 | MsG0780041256.01 | 0.820808 | 5.641284e-53 | 4.509818e-50 |
| MsG0580028397.01 | MsG0780041617.01 | 0.819424 | 1.170268e-52 | 9.002000e-50 |
| MsG0580028397.01 | MsG0780041618.01 | 0.844506 | 7.249639e-59 | 1.172912e-55 |
| MsG0580028397.01 | MsG0780041807.01 | 0.815894 | 7.316976e-52 | 5.107736e-49 |
| MsG0580028397.01 | MsG0880041850.01 | 0.840445 | 8.660893e-58 | 1.233960e-54 |
| MsG0580028397.01 | MsG0880042030.01 | 0.838046 | 3.628316e-57 | 4.802308e-54 |
| MsG0580028397.01 | MsG0880042256.01 | 0.845516 | 3.867349e-59 | 6.461002e-56 |
| MsG0580028397.01 | MsG0880042291.01 | 0.806681 | 7.311196e-50 | 3.992825e-47 |
| MsG0580028397.01 | MsG0880042343.01 | 0.811342 | 7.345150e-51 | 4.534882e-48 |
| MsG0580028397.01 | MsG0880042922.01 | 0.801358 | 9.349710e-49 | 4.456141e-46 |
| MsG0580028397.01 | MsG0880043515.01 | 0.822790 | 1.962100e-53 | 1.658807e-50 |
| MsG0580028397.01 | MsG0880043621.01 | 0.800713 | 1.266540e-48 | 5.938392e-46 |
| MsG0580028397.01 | MsG0880044105.01 | 0.829459 | 5.087351e-55 | 5.209919e-52 |
| MsG0580028397.01 | MsG0880044317.01 | 0.833614 | 4.820962e-56 | 5.580947e-53 |
| MsG0580028397.01 | MsG0880044318.01 | 0.853951 | 1.701022e-61 | 3.738842e-58 |
| MsG0580028397.01 | MsG0880044453.01 | 0.824850 | 6.455503e-54 | 5.786580e-51 |
| MsG0580028397.01 | MsG0880044558.01 | 0.805871 | 1.082643e-49 | 5.792081e-47 |
| MsG0580028397.01 | MsG0880044636.01 | 0.800728 | 1.258054e-48 | 5.900978e-46 |
| MsG0580028397.01 | MsG0880045373.01 | 0.814968 | 1.175616e-51 | 8.001796e-49 |
| MsG0580028397.01 | MsG0880045377.01 | 0.829653 | 4.564793e-55 | 4.701485e-52 |
| MsG0580028397.01 | MsG0880045378.01 | 0.841290 | 5.196565e-58 | 7.599785e-55 |
| MsG0580028397.01 | MsG0880045394.01 | 0.826872 | 2.137484e-54 | 2.029602e-51 |
| MsG0580028397.01 | MsG0880045400.01 | 0.848078 | 7.706007e-60 | 1.397598e-56 |
| MsG0580028397.01 | MsG0880045409.01 | 0.817592 | 3.045131e-52 | 2.226907e-49 |
| MsG0580028397.01 | MsG0880045423.01 | 0.858195 | 9.733211e-63 | 2.463965e-59 |
| MsG0580028397.01 | MsG0880045761.01 | 0.835118 | 2.021559e-56 | 2.448230e-53 |
| MsG0580028397.01 | MsG0880046010.01 | 0.804107 | 2.531291e-49 | 1.294103e-46 |
| MsG0580028397.01 | MsG0880046048.01 | 0.801155 | 1.029012e-48 | 4.879370e-46 |
| MsG0580028397.01 | MsG0880046160.01 | 0.873987 | 9.601648e-68 | 4.250094e-64 |
| MsG0580028397.01 | MsG0880046189.01 | 0.800202 | 1.609577e-48 | 7.449790e-46 |
| MsG0580028397.01 | MsG0880046456.01 | 0.810052 | 1.396083e-50 | 8.330775e-48 |
| MsG0580028397.01 | MsG0880046574.01 | 0.870598 | 1.293230e-66 | 5.059407e-63 |
| MsG0580028397.01 | MsG0880046630.01 | 0.815647 | 8.306126e-52 | 5.759845e-49 |
| MsG0580028397.01 | MsG0880046735.01 | 0.801633 | 8.210581e-49 | 3.940420e-46 |
| MsG0580028397.01 | MsG0880046968.01 | 0.870563 | 1.327827e-66 | 5.188698e-63 |
| MsG0580028397.01 | MsG0880046969.01 | 0.878992 | 1.791385e-69 | 9.550657e-66 |
| MsG0580028397.01 | MsG0880047107.01 | 0.816439 | 5.527812e-52 | 3.916792e-49 |
| MsG0580028397.01 | MsG0880047112.01 | 0.844790 | 6.076831e-59 | 9.921079e-56 |
| MsG0580028397.01 | MsG0880047660.01 | 0.886523 | 3.175069e-72 | 2.276010e-68 |
| MsG0280006534.01 | MsG0580028397.01 | 0.817086 | 3.958176e-52 | 2.854830e-49 |
| MsG0280007511.01 | MsG0580028397.01 | 0.825321 | 4.996167e-54 | 4.539052e-51 |
| MsG0280007600.01 | MsG0580028397.01 | 0.826392 | 2.782148e-54 | 2.605807e-51 |
| MsG0280007653.01 | MsG0580028397.01 | 0.836440 | 9.346486e-57 | 1.177958e-53 |
| MsG0280008531.01 | MsG0580028397.01 | 0.809791 | 1.588656e-50 | 9.415677e-48 |
| MsG0280009103.01 | MsG0580028397.01 | 0.817876 | 2.626390e-52 | 1.935797e-49 |
| MsG0280009287.01 | MsG0580028397.01 | 0.825064 | 5.746968e-54 | 5.182872e-51 |
| MsG0280009434.01 | MsG0580028397.01 | 0.813829 | 2.099938e-51 | 1.385940e-48 |
| MsG0280009520.01 | MsG0580028397.01 | 0.812475 | 4.160920e-51 | 2.648325e-48 |
| MsG0280010253.01 | MsG0580028397.01 | 0.800219 | 1.597047e-48 | 7.395117e-46 |
| MsG0280010455.01 | MsG0580028397.01 | 0.851943 | 6.383226e-61 | 1.312762e-57 |
| MsG0280010461.01 | MsG0580028397.01 | 0.816350 | 5.786795e-52 | 4.090759e-49 |
| MsG0280010523.01 | MsG0580028397.01 | 0.841333 | 5.062477e-58 | 7.413815e-55 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580028397.01.T01 | MTR_5g070210 | 96.599 | 147 | 5 | 0 | 13 | 159 | 164 | 310 | 2.43e-103 | 298 |
| MsG0580028397.01.T01 | MTR_5g070220 | 80.142 | 141 | 28 | 0 | 19 | 159 | 1 | 141 | 1.68e-84 | 244 |
| MsG0580028397.01.T01 | MTR_5g070250 | 77.241 | 145 | 33 | 0 | 13 | 157 | 79 | 223 | 1.50e-81 | 240 |
| MsG0580028397.01.T01 | MTR_3g074950 | 62.921 | 89 | 32 | 1 | 71 | 158 | 2 | 90 | 1.99e-35 | 119 |
| MsG0580028397.01.T01 | MTR_8g073540 | 43.284 | 67 | 38 | 0 | 86 | 152 | 284 | 350 | 7.36e-12 | 62.4 |
| MsG0580028397.01.T01 | MTR_1g095500 | 50.000 | 54 | 27 | 0 | 99 | 152 | 297 | 350 | 8.94e-12 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580028397.01.T01 | AT5G58770 | 70.139 | 144 | 43 | 0 | 15 | 158 | 165 | 308 | 4.06e-74 | 224 |
| MsG0580028397.01.T01 | AT5G58780 | 58.904 | 146 | 60 | 0 | 13 | 158 | 156 | 301 | 4.94e-60 | 188 |
| MsG0580028397.01.T01 | AT5G58782 | 57.639 | 144 | 61 | 0 | 15 | 158 | 145 | 288 | 1.62e-59 | 186 |
| MsG0580028397.01.T01 | AT5G58782 | 57.639 | 144 | 61 | 0 | 15 | 158 | 163 | 306 | 2.33e-59 | 186 |
| MsG0580028397.01.T01 | AT2G23410 | 56.944 | 144 | 62 | 0 | 15 | 158 | 159 | 302 | 9.67e-58 | 182 |
| MsG0580028397.01.T01 | AT5G58784 | 61.429 | 140 | 52 | 1 | 9 | 148 | 154 | 291 | 5.24e-56 | 178 |
| MsG0580028397.01.T01 | AT2G23400 | 49.306 | 144 | 58 | 2 | 15 | 158 | 158 | 286 | 1.77e-42 | 143 |
| MsG0580028397.01.T01 | AT2G17570 | 29.193 | 161 | 82 | 2 | 14 | 149 | 129 | 282 | 2.05e-16 | 74.7 |
| MsG0580028397.01.T01 | AT5G60500 | 30.556 | 144 | 88 | 3 | 14 | 152 | 125 | 261 | 1.58e-15 | 72.0 |
| MsG0580028397.01.T01 | AT5G60510 | 29.861 | 144 | 89 | 3 | 14 | 152 | 126 | 262 | 1.56e-14 | 69.3 |
Find 30 sgRNAs with CRISPR-Local
Find 59 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAAAACTTTGGCCAGATTT+TGG | 0.177145 | 5:-79954879 | MsG0580028397.01.T01:CDS |
| TGCCAAAATAAGATGGAATT+TGG | 0.186602 | 5:+79955133 | None:intergenic |
| TACCAAATTCCATCTTATTT+TGG | 0.187683 | 5:-79955135 | MsG0580028397.01.T01:CDS |
| AATGCCATCTTGCACTTTCT+TGG | 0.210412 | 5:+79955061 | None:intergenic |
| ATCGGAACGGCGACAACAAC+CGG | 0.308340 | 5:+79955502 | None:intergenic |
| TAATTTCTTGTTATGGCAAT+TGG | 0.324656 | 5:-79954925 | MsG0580028397.01.T01:CDS |
| GGGTTAGTAATTTCTTGTTA+TGG | 0.341933 | 5:-79954932 | MsG0580028397.01.T01:CDS |
| GCAAGATGGCATTATTCATT+TGG | 0.346742 | 5:-79955051 | MsG0580028397.01.T01:CDS |
| AACTCATCCTTTCCAAAATC+TGG | 0.362218 | 5:+79954867 | None:intergenic |
| CTGGTCCGTATTAGTAAATC+CGG | 0.368742 | 5:+79954966 | None:intergenic |
| CAAAATAGACAGAGACGTTA+TGG | 0.385865 | 5:-79954822 | MsG0580028397.01.T01:CDS |
| CTTACCCGGATTTACTAATA+CGG | 0.419675 | 5:-79954971 | MsG0580028397.01.T01:CDS |
| CAATGAGAGATGGCGGTTGC+CGG | 0.428024 | 5:-79955521 | None:intergenic |
| AAATGAAAATATTATTGAAA+AGG | 0.447113 | 5:-79955021 | MsG0580028397.01.T01:CDS |
| GGAATTCAAATATCTGTGAT+TGG | 0.460356 | 5:-79955227 | MsG0580028397.01.T01:CDS |
| ACGGACCAGTGGAGAACTTA+GGG | 0.473431 | 5:-79954952 | MsG0580028397.01.T01:CDS |
| GGTTGTTGTCGCCGTTCCGA+TGG | 0.485209 | 5:-79955500 | MsG0580028397.01.T01:CDS |
| AGCTTACTGCCAAAATAAGA+TGG | 0.496898 | 5:+79955126 | None:intergenic |
| CGTATTAGTAAATCCGGGTA+AGG | 0.505626 | 5:+79954972 | None:intergenic |
| TACGGACCAGTGGAGAACTT+AGG | 0.513930 | 5:-79954953 | MsG0580028397.01.T01:CDS |
| GTTGTTGTCGCCGTTCCGAT+GGG | 0.532247 | 5:-79955499 | MsG0580028397.01.T01:intron |
| TTGTACAGAATTTCCTTACC+CGG | 0.560525 | 5:-79954985 | MsG0580028397.01.T01:CDS |
| ACTAACCCTAAGTTCTCCAC+TGG | 0.570013 | 5:+79954947 | None:intergenic |
| ATTTCTCCCACCCATCGGAA+CGG | 0.625418 | 5:+79955489 | None:intergenic |
| TAGTGCTGAGGAGAGTACAA+AGG | 0.639099 | 5:-79955162 | MsG0580028397.01.T01:CDS |
| GTAGCCAAGAAAGTGCAAGA+TGG | 0.652351 | 5:-79955065 | MsG0580028397.01.T01:CDS |
| AATAGACAGAGACGTTATGG+TGG | 0.652580 | 5:-79954819 | MsG0580028397.01.T01:CDS |
| TGGTCCGTATTAGTAAATCC+GGG | 0.652721 | 5:+79954967 | None:intergenic |
| AAGTATGATAGCTAGTGCTG+AGG | 0.671510 | 5:-79955174 | MsG0580028397.01.T01:CDS |
| GATTTACTAATACGGACCAG+TGG | 0.708808 | 5:-79954963 | MsG0580028397.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATGAAAATATTATTGAAA+AGG | - | Chr5:79955300-79955319 | MsG0580028397.01.T01:intron | 10.0% |
| !! | TGGTATGAAAAAAAAAAAAT+CGG | + | Chr5:79954905-79954924 | None:intergenic | 15.0% |
| !!! | TTTTCTTTAATAGAAAACTT+TGG | - | Chr5:79955431-79955450 | MsG0580028397.01.T01:intron | 15.0% |
| !!! | TCTATTTTGAAATGAAGTTA+AGG | + | Chr5:79955488-79955507 | None:intergenic | 20.0% |
| !! | ATCATACTTTTCAATGACTT+GGG | + | Chr5:79955136-79955155 | None:intergenic | 25.0% |
| !! | TAATTTCTTGTTATGGCAAT+TGG | - | Chr5:79955396-79955415 | MsG0580028397.01.T01:intron | 25.0% |
| !! | TATCATACTTTTCAATGACT+TGG | + | Chr5:79955137-79955156 | None:intergenic | 25.0% |
| !!! | TACCAAATTCCATCTTATTT+TGG | - | Chr5:79955186-79955205 | MsG0580028397.01.T01:CDS | 25.0% |
| AACACCATTACTTTGTTACA+GGG | - | Chr5:79955069-79955088 | MsG0580028397.01.T01:CDS | 30.0% | |
| ATACCACTCCATATATATAG+GGG | - | Chr5:79954919-79954938 | MsG0580028397.01.T01:CDS | 30.0% | |
| CATACCACTCCATATATATA+GGG | - | Chr5:79954918-79954937 | MsG0580028397.01.T01:CDS | 30.0% | |
| GGAATTCAAATATCTGTGAT+TGG | - | Chr5:79955094-79955113 | MsG0580028397.01.T01:CDS | 30.0% | |
| TAACACCATTACTTTGTTAC+AGG | - | Chr5:79955068-79955087 | MsG0580028397.01.T01:CDS | 30.0% | |
| TCATACCACTCCATATATAT+AGG | - | Chr5:79954917-79954936 | MsG0580028397.01.T01:CDS | 30.0% | |
| TGCCAAAATAAGATGGAATT+TGG | + | Chr5:79955191-79955210 | None:intergenic | 30.0% | |
| ! | ATGCTTTTCCCCTATATATA+TGG | + | Chr5:79954930-79954949 | None:intergenic | 30.0% |
| ! | GGGTTAGTAATTTCTTGTTA+TGG | - | Chr5:79955389-79955408 | MsG0580028397.01.T01:intron | 30.0% |
| ! | TTTTACCATTTTACCCTTGT+GGG | + | Chr5:79954977-79954996 | None:intergenic | 30.0% |
| ! | TTTTTACCATTTTACCCTTG+TGG | + | Chr5:79954978-79954997 | None:intergenic | 30.0% |
| AACTCATCCTTTCCAAAATC+TGG | + | Chr5:79955457-79955476 | None:intergenic | 35.0% | |
| AGAAAAATGAGAGAGACGAT+GGG | - | Chr5:79954859-79954878 | MsG0580028397.01.T01:CDS | 35.0% | |
| AGCTTACTGCCAAAATAAGA+TGG | + | Chr5:79955198-79955217 | None:intergenic | 35.0% | |
| CAAAATAGACAGAGACGTTA+TGG | - | Chr5:79955499-79955518 | MsG0580028397.01.T01:intron | 35.0% | |
| CTTACCCGGATTTACTAATA+CGG | - | Chr5:79955350-79955369 | MsG0580028397.01.T01:intron | 35.0% | |
| GCAAGATGGCATTATTCATT+TGG | - | Chr5:79955270-79955289 | MsG0580028397.01.T01:intron | 35.0% | |
| TTGTACAGAATTTCCTTACC+CGG | - | Chr5:79955336-79955355 | MsG0580028397.01.T01:intron | 35.0% | |
| TTTCCCCTATATATATGGAG+TGG | + | Chr5:79954925-79954944 | None:intergenic | 35.0% | |
| ! | AGAAAACTTTGGCCAGATTT+TGG | - | Chr5:79955442-79955461 | MsG0580028397.01.T01:intron | 35.0% |
| ! | TTTACCATTTTACCCTTGTG+GGG | + | Chr5:79954976-79954995 | None:intergenic | 35.0% |
| !! | ATTTTGGCAGTAAGCTATAG+TGG | - | Chr5:79955202-79955221 | MsG0580028397.01.T01:CDS | 35.0% |
| AAGTATGATAGCTAGTGCTG+AGG | - | Chr5:79955147-79955166 | MsG0580028397.01.T01:CDS | 40.0% | |
| AATAGACAGAGACGTTATGG+TGG | - | Chr5:79955502-79955521 | MsG0580028397.01.T01:CDS | 40.0% | |
| AATGCCATCTTGCACTTTCT+TGG | + | Chr5:79955263-79955282 | None:intergenic | 40.0% | |
| CCATTACTTTGTTACAGGGA+AGG | - | Chr5:79955073-79955092 | MsG0580028397.01.T01:CDS | 40.0% | |
| CCTTCCCTGTAACAAAGTAA+TGG | + | Chr5:79955076-79955095 | None:intergenic | 40.0% | |
| CGTATTAGTAAATCCGGGTA+AGG | + | Chr5:79955352-79955371 | None:intergenic | 40.0% | |
| CTGGTCCGTATTAGTAAATC+CGG | + | Chr5:79955358-79955377 | None:intergenic | 40.0% | |
| GAGAAAAATGAGAGAGACGA+TGG | - | Chr5:79954858-79954877 | MsG0580028397.01.T01:CDS | 40.0% | |
| GATTTACTAATACGGACCAG+TGG | - | Chr5:79955358-79955377 | MsG0580028397.01.T01:intron | 40.0% | |
| TGGTCCGTATTAGTAAATCC+GGG | + | Chr5:79955357-79955376 | None:intergenic | 40.0% | |
| TTACCAAAATACCCCCACAA+GGG | - | Chr5:79954961-79954980 | MsG0580028397.01.T01:CDS | 40.0% | |
| TTTACCAAAATACCCCCACA+AGG | - | Chr5:79954960-79954979 | MsG0580028397.01.T01:CDS | 40.0% | |
| ! | TTACCATTTTACCCTTGTGG+GGG | + | Chr5:79954975-79954994 | None:intergenic | 40.0% |
| !! | ACTTTGGCCAGATTTTGGAA+AGG | - | Chr5:79955447-79955466 | MsG0580028397.01.T01:intron | 40.0% |
| ACTAACCCTAAGTTCTCCAC+TGG | + | Chr5:79955377-79955396 | None:intergenic | 45.0% | |
| ATACCCCCACAAGGGTAAAA+TGG | - | Chr5:79954969-79954988 | MsG0580028397.01.T01:CDS | 45.0% | |
| ! | GTAGCCAAGAAAGTGCAAGA+TGG | - | Chr5:79955256-79955275 | MsG0580028397.01.T01:intron | 45.0% |
| ! | TAGTGCTGAGGAGAGTACAA+AGG | - | Chr5:79955159-79955178 | MsG0580028397.01.T01:CDS | 45.0% |
| ! | TGGCTACACTTTTGCATGCT+TGG | + | Chr5:79955243-79955262 | None:intergenic | 45.0% |
| !!! | TTACCCTTGTGGGGGTATTT+TGG | + | Chr5:79954967-79954986 | None:intergenic | 45.0% |
| ACGGACCAGTGGAGAACTTA+GGG | - | Chr5:79955369-79955388 | MsG0580028397.01.T01:intron | 50.0% | |
| ATTTCTCCCACCCATCGGAA+CGG | + | Chr5:79954835-79954854 | None:intergenic | 50.0% | |
| TACGGACCAGTGGAGAACTT+AGG | - | Chr5:79955368-79955387 | MsG0580028397.01.T01:intron | 50.0% | |
| TCTGCATTTCTCCCACCCAT+CGG | + | Chr5:79954840-79954859 | None:intergenic | 50.0% | |
| ATCGGAACGGCGACAACAAC+CGG | + | Chr5:79954822-79954841 | None:intergenic | 55.0% | |
| GTTGTTGTCGCCGTTCCGAT+GGG | - | Chr5:79954822-79954841 | MsG0580028397.01.T01:CDS | 55.0% | |
| GGTTGTTGTCGCCGTTCCGA+TGG | - | Chr5:79954821-79954840 | MsG0580028397.01.T01:CDS | 60.0% | |
| TTGTCGCCGTTCCGATGGGT+GGG | - | Chr5:79954826-79954845 | MsG0580028397.01.T01:CDS | 60.0% | |
| GTTGTCGCCGTTCCGATGGG+TGG | - | Chr5:79954825-79954844 | MsG0580028397.01.T01:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr5 | gene | 79954809 | 79955534 | 79954809 | ID=MsG0580028397.01;Name=MsG0580028397.01 |
| Chr5 | mRNA | 79954809 | 79955534 | 79954809 | ID=MsG0580028397.01.T01;Parent=MsG0580028397.01;Name=MsG0580028397.01.T01;_AED=0.50;_eAED=0.54;_QI=0|0|0|1|0|0.5|2|0|159 |
| Chr5 | exon | 79955500 | 79955534 | 79955500 | ID=MsG0580028397.01.T01:exon:5763;Parent=MsG0580028397.01.T01 |
| Chr5 | exon | 79954809 | 79955253 | 79954809 | ID=MsG0580028397.01.T01:exon:5762;Parent=MsG0580028397.01.T01 |
| Chr5 | CDS | 79955500 | 79955534 | 79955500 | ID=MsG0580028397.01.T01:cds;Parent=MsG0580028397.01.T01 |
| Chr5 | CDS | 79954809 | 79955253 | 79954809 | ID=MsG0580028397.01.T01:cds;Parent=MsG0580028397.01.T01 |
| Gene Sequence |
| Protein sequence |
