Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280010583.01.T01 | AFK45615.1 | 97.531 | 81 | 2 | 0 | 1 | 81 | 60 | 140 | 5.61E-49 | 166 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280010583.01.T01 | Q9ZSY9 | 76.25 | 80 | 19 | 0 | 2 | 81 | 69 | 148 | 4.12E-37 | 132 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280010583.01.T01 | I3SZC3 | 97.531 | 81 | 2 | 0 | 1 | 81 | 60 | 140 | 2.68e-49 | 166 |
MsG0280010583.01.T01 | Q9STA1 | 98.765 | 81 | 1 | 0 | 1 | 81 | 60 | 140 | 4.35e-48 | 168 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0080047999.01 | MsG0280010583.01 | -0.854258 | 1.387806e-61 | 3.081508e-58 |
MsG0080048202.01 | MsG0280010583.01 | -0.853870 | 1.794947e-61 | 3.934896e-58 |
MsG0080048694.01 | MsG0280010583.01 | 0.819870 | 9.256467e-53 | 7.209438e-50 |
MsG0080048695.01 | MsG0280010583.01 | 0.820469 | 6.747325e-53 | 5.343558e-50 |
MsG0080048887.01 | MsG0280010583.01 | 0.831012 | 2.124025e-55 | 2.276048e-52 |
MsG0080048889.01 | MsG0280010583.01 | -0.804225 | 2.392555e-49 | 1.226819e-46 |
MsG0080048919.01 | MsG0280010583.01 | 0.818646 | 1.758643e-52 | 1.323914e-49 |
MsG0080048986.01 | MsG0280010583.01 | 0.814648 | 1.384119e-51 | 9.340245e-49 |
MsG0080048992.01 | MsG0280010583.01 | 0.828111 | 1.078074e-54 | 1.061462e-51 |
MsG0080049018.01 | MsG0280010583.01 | 0.820411 | 6.959137e-53 | 5.502527e-50 |
MsG0080049019.01 | MsG0280010583.01 | 0.805788 | 1.127192e-49 | 6.017451e-47 |
MsG0080049023.01 | MsG0280010583.01 | 0.887558 | 1.283867e-72 | 9.593724e-69 |
MsG0080049066.01 | MsG0280010583.01 | 0.805622 | 1.221535e-49 | 6.493102e-47 |
MsG0080049133.01 | MsG0280010583.01 | 0.828866 | 7.083535e-55 | 7.128261e-52 |
MsG0180000417.01 | MsG0280010583.01 | 0.845161 | 4.825763e-59 | 7.970569e-56 |
MsG0180000551.01 | MsG0280010583.01 | -0.806097 | 9.705046e-50 | 5.222017e-47 |
MsG0180000583.01 | MsG0280010583.01 | -0.801715 | 7.900648e-49 | 3.799434e-46 |
MsG0180000719.01 | MsG0280010583.01 | 0.842291 | 2.828872e-58 | 4.269500e-55 |
MsG0180001054.01 | MsG0280010583.01 | 0.826191 | 3.106511e-54 | 2.892990e-51 |
MsG0180001116.01 | MsG0280010583.01 | 0.851651 | 7.724132e-61 | 1.574059e-57 |
MsG0180001484.01 | MsG0280010583.01 | 0.813721 | 2.217415e-51 | 1.459269e-48 |
MsG0180001615.01 | MsG0280010583.01 | 0.863512 | 2.360479e-64 | 7.174493e-61 |
MsG0180001827.01 | MsG0280010583.01 | 0.816333 | 5.836226e-52 | 4.123833e-49 |
MsG0180001925.01 | MsG0280010583.01 | 0.804423 | 2.176073e-49 | 1.121491e-46 |
MsG0180002021.01 | MsG0280010583.01 | 0.819912 | 9.054347e-53 | 7.060533e-50 |
MsG0180002099.01 | MsG0280010583.01 | 0.850769 | 1.370173e-60 | 2.713221e-57 |
MsG0180002425.01 | MsG0280010583.01 | 0.803835 | 2.884374e-49 | 1.464335e-46 |
MsG0180002454.01 | MsG0280010583.01 | 0.804804 | 1.811544e-49 | 9.429583e-47 |
MsG0180002463.01 | MsG0280010583.01 | 0.809087 | 2.250286e-50 | 1.308898e-47 |
MsG0180003350.01 | MsG0280010583.01 | 0.818623 | 1.779807e-52 | 1.338988e-49 |
MsG0180003351.01 | MsG0280010583.01 | 0.884338 | 2.088857e-71 | 1.373023e-67 |
MsG0180003405.01 | MsG0280010583.01 | 0.841678 | 4.108703e-58 | 6.081979e-55 |
MsG0180003757.01 | MsG0280010583.01 | 0.809399 | 1.929152e-50 | 1.131511e-47 |
MsG0180003758.01 | MsG0280010583.01 | 0.843054 | 1.773371e-58 | 2.740847e-55 |
MsG0180004124.01 | MsG0280010583.01 | 0.822884 | 1.865564e-53 | 1.581384e-50 |
MsG0180004125.01 | MsG0280010583.01 | 0.823361 | 1.443575e-53 | 1.240157e-50 |
MsG0180004193.01 | MsG0280010583.01 | 0.805774 | 1.135082e-49 | 6.057415e-47 |
MsG0180004322.01 | MsG0280010583.01 | 0.808016 | 3.810356e-50 | 2.154541e-47 |
MsG0180004502.01 | MsG0280010583.01 | 0.812823 | 3.491698e-51 | 2.242537e-48 |
MsG0180004553.01 | MsG0280010583.01 | 0.828312 | 9.641447e-55 | 9.547875e-52 |
MsG0180004580.01 | MsG0280010583.01 | 0.832412 | 9.596227e-56 | 1.071791e-52 |
MsG0180004581.01 | MsG0280010583.01 | 0.845583 | 3.709806e-59 | 6.210959e-56 |
MsG0180004731.01 | MsG0280010583.01 | 0.862126 | 6.320515e-64 | 1.830718e-60 |
MsG0180004737.01 | MsG0280010583.01 | 0.845747 | 3.349168e-59 | 5.637792e-56 |
MsG0180004773.01 | MsG0280010583.01 | 0.872549 | 2.919610e-67 | 1.226931e-63 |
MsG0180004787.01 | MsG0280010583.01 | 0.827836 | 1.255409e-54 | 1.226023e-51 |
MsG0180005272.01 | MsG0280010583.01 | -0.859765 | 3.299011e-63 | 8.811717e-60 |
MsG0180005328.01 | MsG0280010583.01 | -0.821025 | 5.026384e-53 | 4.043028e-50 |
MsG0180005369.01 | MsG0280010583.01 | 0.806549 | 7.795323e-50 | 4.243114e-47 |
MsG0180005474.01 | MsG0280010583.01 | 0.876370 | 1.474248e-68 | 7.128825e-65 |
MsG0180005672.01 | MsG0280010583.01 | 0.804882 | 1.744755e-49 | 9.100608e-47 |
MsG0180005791.01 | MsG0280010583.01 | 0.820818 | 5.609695e-53 | 4.485773e-50 |
MsG0180005833.01 | MsG0280010583.01 | 0.813032 | 3.142116e-51 | 2.029420e-48 |
MsG0180006212.01 | MsG0280010583.01 | 0.809245 | 2.081238e-50 | 1.215728e-47 |
MsG0180006227.01 | MsG0280010583.01 | 0.868088 | 8.463912e-66 | 3.023583e-62 |
MsG0180006239.01 | MsG0280010583.01 | 0.809478 | 1.854970e-50 | 1.090248e-47 |
MsG0280006381.01 | MsG0280010583.01 | 0.853082 | 3.022884e-61 | 6.453521e-58 |
MsG0280010583.01 | MsG0280010584.01 | 0.900953 | 4.371978e-78 | 5.776740e-74 |
MsG0280010583.01 | MsG0280010606.01 | 0.802809 | 4.702967e-49 | 2.325798e-46 |
MsG0280010583.01 | MsG0280010944.01 | -0.816777 | 4.643284e-52 | 3.320792e-49 |
MsG0280010583.01 | MsG0280011281.01 | 0.878451 | 2.778752e-69 | 1.451826e-65 |
MsG0280010583.01 | MsG0280011389.01 | 0.812425 | 4.266688e-51 | 2.712077e-48 |
MsG0280010583.01 | MsG0380012148.01 | 0.838278 | 3.161911e-57 | 4.213919e-54 |
MsG0280010583.01 | MsG0380013114.01 | 0.835096 | 2.047672e-56 | 2.478098e-53 |
MsG0280010583.01 | MsG0380013501.01 | 0.804551 | 2.045736e-49 | 1.057856e-46 |
MsG0280010583.01 | MsG0380013506.01 | 0.802168 | 6.375336e-49 | 3.101573e-46 |
MsG0280010583.01 | MsG0380013928.01 | 0.818836 | 1.592215e-52 | 1.205037e-49 |
MsG0280010583.01 | MsG0380014029.01 | 0.820560 | 6.430306e-53 | 5.105120e-50 |
MsG0280010583.01 | MsG0380014129.01 | 0.812522 | 4.064272e-51 | 2.589949e-48 |
MsG0280010583.01 | MsG0380014231.01 | 0.811937 | 5.453770e-51 | 3.420657e-48 |
MsG0280010583.01 | MsG0380014639.01 | 0.874752 | 5.283387e-68 | 2.406077e-64 |
MsG0280010583.01 | MsG0380014642.01 | 0.842883 | 1.970115e-58 | 3.028657e-55 |
MsG0280010583.01 | MsG0380014735.01 | 0.853826 | 1.848618e-61 | 4.046498e-58 |
MsG0280010583.01 | MsG0380014802.01 | -0.841341 | 5.039519e-58 | 7.381975e-55 |
MsG0280010583.01 | MsG0380015384.01 | 0.811874 | 5.628751e-51 | 3.524514e-48 |
MsG0280010583.01 | MsG0380015417.01 | 0.830370 | 3.052112e-55 | 3.209366e-52 |
MsG0280010583.01 | MsG0380015654.01 | 0.843295 | 1.530291e-58 | 2.383593e-55 |
MsG0280010583.01 | MsG0380015719.01 | 0.812421 | 4.275314e-51 | 2.717255e-48 |
MsG0280010583.01 | MsG0380015795.01 | 0.800030 | 1.745019e-48 | 8.041396e-46 |
MsG0280010583.01 | MsG0380015828.01 | 0.829909 | 3.954667e-55 | 4.103690e-52 |
MsG0280010583.01 | MsG0380016065.01 | 0.816427 | 5.562594e-52 | 3.940144e-49 |
MsG0280010583.01 | MsG0380016089.01 | 0.800220 | 1.596350e-48 | 7.391980e-46 |
MsG0280010583.01 | MsG0380016166.01 | 0.809060 | 2.280291e-50 | 1.325359e-47 |
MsG0280010583.01 | MsG0380016202.01 | 0.802546 | 5.329482e-49 | 2.617814e-46 |
MsG0280010583.01 | MsG0380016241.01 | 0.804787 | 1.826972e-49 | 9.505375e-47 |
MsG0280010583.01 | MsG0380016718.01 | 0.817660 | 2.939367e-52 | 2.153641e-49 |
MsG0280010583.01 | MsG0380016889.01 | 0.813636 | 2.315791e-51 | 1.520415e-48 |
MsG0280010583.01 | MsG0380016934.01 | 0.813369 | 2.651013e-51 | 1.728006e-48 |
MsG0280010583.01 | MsG0380016935.01 | 0.825090 | 5.664348e-54 | 5.112396e-51 |
MsG0280010583.01 | MsG0380017405.01 | 0.841589 | 4.335047e-58 | 6.400069e-55 |
MsG0280010583.01 | MsG0380017406.01 | 0.827235 | 1.749653e-54 | 1.679201e-51 |
MsG0280010583.01 | MsG0380017812.01 | 0.901155 | 3.564464e-78 | 4.754489e-74 |
MsG0280010583.01 | MsG0380017928.01 | 0.851613 | 7.916825e-61 | 1.611381e-57 |
MsG0280010583.01 | MsG0380018006.01 | -0.800206 | 1.606600e-48 | 7.436877e-46 |
MsG0280010583.01 | MsG0380018035.01 | 0.801215 | 9.999924e-49 | 4.748908e-46 |
MsG0280010583.01 | MsG0380018051.01 | -0.828283 | 9.797432e-55 | 9.694142e-52 |
MsG0280010583.01 | MsG0480018098.01 | 0.810197 | 1.299045e-50 | 7.780718e-48 |
MsG0280010583.01 | MsG0480018201.01 | 0.861200 | 1.212201e-63 | 3.401849e-60 |
MsG0280010583.01 | MsG0480018202.01 | 0.870074 | 1.919662e-66 | 7.370352e-63 |
MsG0280010583.01 | MsG0480018203.01 | 0.862679 | 4.272373e-64 | 1.261681e-60 |
MsG0280010583.01 | MsG0480018463.01 | 0.806262 | 8.961418e-50 | 4.842404e-47 |
MsG0280010583.01 | MsG0480018494.01 | 0.807190 | 5.705695e-50 | 3.157544e-47 |
MsG0280010583.01 | MsG0480018628.01 | 0.812608 | 3.891983e-51 | 2.485664e-48 |
MsG0280010583.01 | MsG0480018713.01 | 0.807913 | 4.006531e-50 | 2.259235e-47 |
MsG0280010583.01 | MsG0480018840.01 | 0.801994 | 6.922179e-49 | 3.352634e-46 |
MsG0280010583.01 | MsG0480019045.01 | 0.844030 | 9.726999e-59 | 1.550562e-55 |
MsG0280010583.01 | MsG0480019046.01 | 0.852354 | 4.877791e-61 | 1.016484e-57 |
MsG0280010583.01 | MsG0480019183.01 | 0.831782 | 1.373344e-55 | 1.505829e-52 |
MsG0280010583.01 | MsG0480019304.01 | -0.838962 | 2.105565e-57 | 2.865465e-54 |
MsG0280010583.01 | MsG0480019484.01 | 0.806720 | 7.172535e-50 | 3.921266e-47 |
MsG0280010583.01 | MsG0480020072.01 | 0.809960 | 1.461222e-50 | 8.698773e-48 |
MsG0280010583.01 | MsG0480020076.01 | 0.829922 | 3.925637e-55 | 4.074890e-52 |
MsG0280010583.01 | MsG0480020269.01 | 0.819631 | 1.049610e-52 | 8.120247e-50 |
MsG0280010583.01 | MsG0480020345.01 | -0.800908 | 1.155940e-48 | 5.447181e-46 |
MsG0280010583.01 | MsG0480020550.01 | 0.830471 | 2.882081e-55 | 3.039252e-52 |
MsG0280010583.01 | MsG0480020838.01 | 0.856853 | 2.429686e-62 | 5.878134e-59 |
MsG0280010583.01 | MsG0480021169.01 | 0.813427 | 2.574425e-51 | 1.680684e-48 |
MsG0280010583.01 | MsG0480021327.01 | 0.828907 | 6.926178e-55 | 6.978184e-52 |
MsG0280010583.01 | MsG0480021331.01 | 0.823224 | 1.554189e-53 | 1.330106e-50 |
MsG0280010583.01 | MsG0480021563.01 | 0.830502 | 2.833150e-55 | 2.990306e-52 |
MsG0280010583.01 | MsG0480022002.01 | 0.840666 | 7.578433e-58 | 1.087132e-54 |
MsG0280010583.01 | MsG0480022411.01 | 0.821888 | 3.177139e-53 | 2.617935e-50 |
MsG0280010583.01 | MsG0480022458.01 | 0.803840 | 2.876320e-49 | 1.460486e-46 |
MsG0280010583.01 | MsG0480022591.01 | 0.805207 | 1.491989e-49 | 7.846755e-47 |
MsG0280010583.01 | MsG0480022687.01 | 0.826083 | 3.295679e-54 | 3.059558e-51 |
MsG0280010583.01 | MsG0480022721.01 | -0.809973 | 1.452058e-50 | 8.646927e-48 |
MsG0280010583.01 | MsG0480022935.01 | 0.888853 | 4.083571e-73 | 3.217276e-69 |
MsG0280010583.01 | MsG0480023087.01 | 0.816639 | 4.984313e-52 | 3.551222e-49 |
MsG0280010583.01 | MsG0480023103.01 | 0.819361 | 1.209216e-52 | 9.284651e-50 |
MsG0280010583.01 | MsG0480023152.01 | 0.856796 | 2.524862e-62 | 6.096634e-59 |
MsG0280010583.01 | MsG0480023211.01 | 0.821251 | 4.458792e-53 | 3.608536e-50 |
MsG0280010583.01 | MsG0480023217.01 | 0.801850 | 7.410855e-49 | 3.576344e-46 |
MsG0280010583.01 | MsG0480023242.01 | 0.855815 | 4.897588e-62 | 1.144982e-58 |
MsG0280010583.01 | MsG0480023244.01 | 0.850053 | 2.177388e-60 | 4.212070e-57 |
MsG0280010583.01 | MsG0480023469.01 | 0.808859 | 2.518044e-50 | 1.455677e-47 |
MsG0280010583.01 | MsG0480023577.01 | 0.832093 | 1.150751e-55 | 1.273133e-52 |
MsG0280010583.01 | MsG0480023695.01 | 0.876972 | 9.120892e-69 | 4.509430e-65 |
MsG0280010583.01 | MsG0580024278.01 | 0.824064 | 9.882259e-54 | 8.660371e-51 |
MsG0280010583.01 | MsG0580024372.01 | 0.810723 | 1.000507e-50 | 6.077061e-48 |
MsG0280010583.01 | MsG0580024398.01 | -0.833516 | 5.099248e-56 | 5.886374e-53 |
MsG0280010583.01 | MsG0580024442.01 | 0.890751 | 7.417786e-74 | 6.321456e-70 |
MsG0280010583.01 | MsG0580024448.01 | 0.837468 | 5.105210e-57 | 6.638020e-54 |
MsG0280010583.01 | MsG0580024493.01 | 0.838409 | 2.924966e-57 | 3.914277e-54 |
MsG0280010583.01 | MsG0580024688.01 | 0.804530 | 2.067066e-49 | 1.068254e-46 |
MsG0280010583.01 | MsG0580024804.01 | 0.805991 | 1.021820e-49 | 5.483441e-47 |
MsG0280010583.01 | MsG0580025105.01 | 0.856438 | 3.216536e-62 | 7.677769e-59 |
MsG0280010583.01 | MsG0580025259.01 | 0.836221 | 1.062249e-56 | 1.330201e-53 |
MsG0280010583.01 | MsG0580025317.01 | 0.805653 | 1.203088e-49 | 6.400392e-47 |
MsG0280010583.01 | MsG0580025447.01 | 0.815068 | 1.117357e-51 | 7.625737e-49 |
MsG0280010583.01 | MsG0580025486.01 | 0.836075 | 1.156998e-56 | 1.442305e-53 |
MsG0280010583.01 | MsG0580026362.01 | 0.847893 | 8.665357e-60 | 1.562706e-56 |
MsG0280010583.01 | MsG0580027276.01 | 0.835800 | 1.359213e-56 | 1.680152e-53 |
MsG0280010583.01 | MsG0580027797.01 | -0.837711 | 4.423800e-57 | 5.795516e-54 |
MsG0280010583.01 | MsG0580028013.01 | 0.803304 | 3.716842e-49 | 1.861296e-46 |
MsG0280010583.01 | MsG0580028159.01 | 0.847941 | 8.409127e-60 | 1.518758e-56 |
MsG0280010583.01 | MsG0580029792.01 | 0.826140 | 3.194979e-54 | 2.970950e-51 |
MsG0280010583.01 | MsG0580030014.01 | 0.826069 | 3.320767e-54 | 3.081625e-51 |
MsG0280010583.01 | MsG0580030197.01 | 0.804837 | 1.783234e-49 | 9.290162e-47 |
MsG0280010583.01 | MsG0680030296.01 | -0.810745 | 9.892625e-51 | 6.012438e-48 |
MsG0280010583.01 | MsG0680030315.01 | -0.815607 | 8.478140e-52 | 5.872801e-49 |
MsG0280010583.01 | MsG0680030441.01 | 0.803901 | 2.793726e-49 | 1.420805e-46 |
MsG0280010583.01 | MsG0680030644.01 | 0.827099 | 1.885733e-54 | 1.802532e-51 |
MsG0280010583.01 | MsG0680030878.01 | 0.829629 | 4.624385e-55 | 4.759502e-52 |
MsG0280010583.01 | MsG0680030960.01 | -0.823052 | 1.704446e-53 | 1.451798e-50 |
MsG0280010583.01 | MsG0680031019.01 | -0.818279 | 2.129203e-52 | 1.586764e-49 |
MsG0280010583.01 | MsG0680031204.01 | 0.820269 | 7.497933e-53 | 5.905121e-50 |
MsG0280010583.01 | MsG0680031813.01 | 0.821457 | 3.997256e-53 | 3.253579e-50 |
MsG0280010583.01 | MsG0680032197.01 | 0.807862 | 4.107511e-50 | 2.313130e-47 |
MsG0280010583.01 | MsG0680032416.01 | 0.811080 | 8.370524e-51 | 5.132803e-48 |
MsG0280010583.01 | MsG0680035368.01 | 0.844806 | 6.015854e-59 | 9.826247e-56 |
MsG0280010583.01 | MsG0680035584.01 | 0.843380 | 1.451845e-58 | 2.267625e-55 |
MsG0280010583.01 | MsG0680035870.01 | 0.833410 | 5.418276e-56 | 6.234787e-53 |
MsG0280010583.01 | MsG0780035993.01 | -0.816262 | 6.056026e-52 | 4.270722e-49 |
MsG0280010583.01 | MsG0780035994.01 | 0.825103 | 5.625672e-54 | 5.079141e-51 |
MsG0280010583.01 | MsG0780035995.01 | 0.822843 | 1.906778e-53 | 1.614498e-50 |
MsG0280010583.01 | MsG0780036421.01 | -0.815756 | 7.853602e-52 | 5.462420e-49 |
MsG0280010583.01 | MsG0780037182.01 | -0.808976 | 2.377073e-50 | 1.378493e-47 |
MsG0280010583.01 | MsG0780037458.01 | 0.885825 | 5.820184e-72 | 4.056013e-68 |
MsG0280010583.01 | MsG0780038047.01 | 0.822947 | 1.803515e-53 | 1.531527e-50 |
MsG0280010583.01 | MsG0780038431.01 | -0.810816 | 9.551213e-51 | 5.815722e-48 |
MsG0280010583.01 | MsG0780039287.01 | 0.857435 | 1.635082e-62 | 4.035101e-59 |
MsG0280010583.01 | MsG0780039821.01 | 0.804753 | 1.857092e-49 | 9.653879e-47 |
MsG0280010583.01 | MsG0780039836.01 | 0.826575 | 2.516085e-54 | 2.368755e-51 |
MsG0280010583.01 | MsG0780039838.01 | 0.876214 | 1.667827e-68 | 8.019143e-65 |
MsG0280010583.01 | MsG0780039839.01 | 0.870047 | 1.960138e-66 | 7.518537e-63 |
MsG0280010583.01 | MsG0780040154.01 | 0.854583 | 1.117722e-61 | 2.508288e-58 |
MsG0280010583.01 | MsG0780040167.01 | 0.876449 | 1.384682e-68 | 6.716984e-65 |
MsG0280010583.01 | MsG0780040892.01 | 0.828570 | 8.352576e-55 | 8.334230e-52 |
MsG0280010583.01 | MsG0780041025.01 | -0.809736 | 1.633110e-50 | 9.664976e-48 |
MsG0280010583.01 | MsG0780041121.01 | 0.818352 | 2.049959e-52 | 1.530951e-49 |
MsG0280010583.01 | MsG0780041478.01 | 0.801254 | 9.822116e-49 | 4.668920e-46 |
MsG0280010583.01 | MsG0780041531.01 | 0.809810 | 1.574359e-50 | 9.335338e-48 |
MsG0280010583.01 | MsG0780041618.01 | 0.810611 | 1.057743e-50 | 6.405361e-48 |
MsG0280010583.01 | MsG0780041620.01 | 0.811710 | 6.110088e-51 | 3.809285e-48 |
MsG0280010583.01 | MsG0780041663.01 | -0.819668 | 1.028967e-52 | 7.969280e-50 |
MsG0280010583.01 | MsG0780041691.01 | 0.831914 | 1.273915e-55 | 1.402220e-52 |
MsG0280010583.01 | MsG0780041783.01 | 0.819980 | 8.734293e-53 | 6.824013e-50 |
MsG0280010583.01 | MsG0780041809.01 | 0.811404 | 7.121392e-51 | 4.404346e-48 |
MsG0280010583.01 | MsG0880041835.01 | 0.843936 | 1.031274e-58 | 1.639106e-55 |
MsG0280010583.01 | MsG0880042291.01 | 0.866845 | 2.116139e-65 | 7.236503e-62 |
MsG0280010583.01 | MsG0880042588.01 | 0.812540 | 4.027567e-51 | 2.567815e-48 |
MsG0280010583.01 | MsG0880042858.01 | 0.818906 | 1.534535e-52 | 1.163707e-49 |
MsG0280010583.01 | MsG0880042922.01 | 0.818870 | 1.564428e-52 | 1.185109e-49 |
MsG0280010583.01 | MsG0880043916.01 | -0.820318 | 7.307398e-53 | 5.762674e-50 |
MsG0280010583.01 | MsG0880044317.01 | 0.800996 | 1.108996e-48 | 5.237788e-46 |
MsG0280010583.01 | MsG0880044318.01 | 0.811229 | 7.772477e-51 | 4.784737e-48 |
MsG0280010583.01 | MsG0880044387.01 | 0.806133 | 9.537373e-50 | 5.136496e-47 |
MsG0280010583.01 | MsG0880044968.01 | 0.813030 | 3.146114e-51 | 2.031868e-48 |
MsG0280010583.01 | MsG0880045054.01 | -0.854845 | 9.382429e-62 | 2.123935e-58 |
MsG0280010583.01 | MsG0880045063.01 | 0.816905 | 4.345088e-52 | 3.118459e-49 |
MsG0280010583.01 | MsG0880045273.01 | 0.819959 | 8.829541e-53 | 6.894468e-50 |
MsG0280010583.01 | MsG0880045274.01 | 0.807183 | 5.723088e-50 | 3.166685e-47 |
MsG0280010583.01 | MsG0880045321.01 | 0.811619 | 6.395396e-51 | 3.977522e-48 |
MsG0280010583.01 | MsG0880045369.01 | 0.855228 | 7.262645e-62 | 1.664850e-58 |
MsG0280010583.01 | MsG0880045385.01 | 0.843614 | 1.257010e-58 | 1.977850e-55 |
MsG0280010583.01 | MsG0880045400.01 | 0.814860 | 1.242323e-51 | 8.431150e-49 |
MsG0280010583.01 | MsG0880045698.01 | 0.808793 | 2.600897e-50 | 1.500928e-47 |
MsG0280010583.01 | MsG0880045703.01 | 0.806032 | 1.001456e-49 | 5.379705e-47 |
MsG0280010583.01 | MsG0880045968.01 | 0.817092 | 3.945765e-52 | 2.846359e-49 |
MsG0280010583.01 | MsG0880046010.01 | 0.873179 | 1.796708e-67 | 7.724694e-64 |
MsG0280010583.01 | MsG0880046105.01 | 0.814749 | 1.314793e-51 | 8.896260e-49 |
MsG0280010583.01 | MsG0880046189.01 | 0.828311 | 9.648193e-55 | 9.554124e-52 |
MsG0280010583.01 | MsG0880046219.01 | 0.822322 | 2.520238e-53 | 2.102518e-50 |
MsG0280010583.01 | MsG0880046341.01 | 0.859008 | 5.564183e-63 | 1.447929e-59 |
MsG0280010583.01 | MsG0880046469.01 | 0.816891 | 4.376313e-52 | 3.139676e-49 |
MsG0280010583.01 | MsG0880046630.01 | 0.877823 | 4.613918e-69 | 2.353266e-65 |
MsG0280010583.01 | MsG0880046639.01 | 0.803959 | 2.717335e-49 | 1.383991e-46 |
MsG0280010583.01 | MsG0880046876.01 | 0.818819 | 1.606211e-52 | 1.214997e-49 |
MsG0280010583.01 | MsG0880047627.01 | 0.803391 | 3.564672e-49 | 1.789143e-46 |
MsG0280006534.01 | MsG0280010583.01 | 0.826899 | 2.105437e-54 | 2.000925e-51 |
MsG0280006831.01 | MsG0280010583.01 | 0.806818 | 6.837805e-50 | 3.747824e-47 |
MsG0280006880.01 | MsG0280010583.01 | 0.801293 | 9.641316e-49 | 4.587606e-46 |
MsG0280006883.01 | MsG0280010583.01 | -0.836469 | 9.187375e-57 | 1.158927e-53 |
MsG0280006973.01 | MsG0280010583.01 | 0.817439 | 3.295540e-52 | 2.400112e-49 |
MsG0280007017.01 | MsG0280010583.01 | 0.840394 | 8.928315e-58 | 1.270091e-54 |
MsG0280007248.01 | MsG0280010583.01 | 0.822395 | 2.423705e-53 | 2.026334e-50 |
MsG0280007288.01 | MsG0280010583.01 | 0.818594 | 1.806726e-52 | 1.358177e-49 |
MsG0280007291.01 | MsG0280010583.01 | 0.804482 | 2.115115e-49 | 1.091761e-46 |
MsG0280007505.01 | MsG0280010583.01 | -0.805356 | 1.388789e-49 | 7.332022e-47 |
MsG0280007653.01 | MsG0280010583.01 | 0.855530 | 5.931876e-62 | 1.373660e-58 |
MsG0280008495.01 | MsG0280010583.01 | -0.814657 | 1.378138e-51 | 9.301842e-49 |
MsG0280008553.01 | MsG0280010583.01 | -0.820224 | 7.677481e-53 | 6.038937e-50 |
MsG0280008820.01 | MsG0280010583.01 | 0.817804 | 2.726309e-52 | 2.005547e-49 |
MsG0280008886.01 | MsG0280010583.01 | -0.832905 | 7.240728e-56 | 8.206429e-53 |
MsG0280009008.01 | MsG0280010583.01 | 0.818308 | 2.097409e-52 | 1.564365e-49 |
MsG0280009079.01 | MsG0280010583.01 | 0.852841 | 3.542086e-61 | 7.500576e-58 |
MsG0280009094.01 | MsG0280010583.01 | 0.847647 | 1.013180e-59 | 1.813023e-56 |
MsG0280009103.01 | MsG0280010583.01 | 0.804281 | 2.329277e-49 | 1.196132e-46 |
MsG0280009287.01 | MsG0280010583.01 | 0.812211 | 4.751581e-51 | 3.002808e-48 |
MsG0280009742.01 | MsG0280010583.01 | 0.835011 | 2.150480e-56 | 2.596207e-53 |
MsG0280009864.01 | MsG0280010583.01 | 0.809875 | 1.524295e-50 | 9.053692e-48 |
MsG0280010047.01 | MsG0280010583.01 | -0.823012 | 1.742007e-53 | 1.482062e-50 |
MsG0280010053.01 | MsG0280010583.01 | -0.803354 | 3.628734e-49 | 1.819499e-46 |
MsG0280010054.01 | MsG0280010583.01 | -0.806532 | 7.856905e-50 | 4.274826e-47 |
MsG0280010055.01 | MsG0280010583.01 | -0.826097 | 3.269497e-54 | 3.036562e-51 |
MsG0280010142.01 | MsG0280010583.01 | 0.811310 | 7.464746e-51 | 4.604881e-48 |
MsG0280010149.01 | MsG0280010583.01 | 0.803236 | 3.838653e-49 | 1.918973e-46 |
MsG0280010227.01 | MsG0280010583.01 | 0.879931 | 8.326037e-70 | 4.601134e-66 |
MsG0280010240.01 | MsG0280010583.01 | -0.862333 | 5.459725e-64 | 1.592999e-60 |
MsG0280010455.01 | MsG0280010583.01 | 0.850972 | 1.201422e-60 | 2.395036e-57 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280010583.01.T01 | MTR_2g087890 | 97.531 | 81 | 2 | 0 | 1 | 81 | 60 | 140 | 3.49e-51 | 166 |
MsG0280010583.01.T01 | MTR_3g111530 | 53.846 | 78 | 34 | 2 | 1 | 78 | 129 | 204 | 1.77e-20 | 84.0 |
MsG0280010583.01.T01 | MTR_1g021652 | 51.852 | 81 | 37 | 2 | 1 | 81 | 95 | 173 | 2.75e-20 | 83.6 |
MsG0280010583.01.T01 | MTR_1g034320 | 51.852 | 81 | 37 | 2 | 1 | 81 | 52 | 130 | 2.60e-19 | 80.5 |
MsG0280010583.01.T01 | MTR_1g034330 | 49.383 | 81 | 39 | 2 | 1 | 81 | 56 | 134 | 7.13e-18 | 76.6 |
MsG0280010583.01.T01 | MTR_4g068550 | 46.835 | 79 | 40 | 1 | 1 | 79 | 49 | 125 | 2.83e-16 | 72.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280010583.01.T01 | AT5G42650 | 50.000 | 76 | 36 | 1 | 3 | 78 | 91 | 164 | 1.40e-18 | 78.6 |
MsG0280010583.01.T01 | AT4G15440 | 70.000 | 40 | 12 | 0 | 42 | 81 | 1 | 40 | 2.32e-14 | 66.6 |
Find 21 sgRNAs with CRISPR-Local
Find 21 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTGAATTTACGGGAAATATT+AGG | 0.183729 | 2:+71766231 | MsG0280010583.01.T01:CDS |
TTTCTCTCACCTCTTTGATA+TGG | 0.280521 | 2:+71766160 | MsG0280010583.01.T01:CDS |
TGTTCCTAGTGTTGAATTTA+CGG | 0.291492 | 2:+71766220 | MsG0280010583.01.T01:CDS |
TCAAGAACTGCAATAATATT+AGG | 0.294757 | 2:-71766128 | None:intergenic |
TGAATTTACGGGAAATATTA+GGG | 0.330709 | 2:+71766232 | MsG0280010583.01.T01:CDS |
GTTCCTAGTGTTGAATTTAC+GGG | 0.375540 | 2:+71766221 | MsG0280010583.01.T01:CDS |
GGATTCACGTTGGTGAAGAA+AGG | 0.453342 | 2:-71766107 | None:intergenic |
GACAAAAGAGATGTTCTAGT+TGG | 0.460373 | 2:+71766191 | MsG0280010583.01.T01:CDS |
TTTACGGGAAATATTAGGGT+TGG | 0.514210 | 2:+71766236 | MsG0280010583.01.T01:CDS |
GATTCACGTTGGTGAAGAAA+GGG | 0.521739 | 2:-71766106 | None:intergenic |
TTCTGAACCTCAACATGCTA+AGG | 0.543924 | 2:+71766274 | MsG0280010583.01.T01:CDS |
TTTCCCGTAAATTCAACACT+AGG | 0.562457 | 2:-71766224 | None:intergenic |
AGTGGTACCTTAGCATGTTG+AGG | 0.575238 | 2:-71766281 | None:intergenic |
AGGGAACGTGGGTGGAACAT+TGG | 0.578719 | 2:-71766087 | None:intergenic |
GAAAGTAGGTGGTGTCATAG+TGG | 0.592408 | 2:-71766299 | None:intergenic |
ACGTGGGTGGAACATTGGTA+CGG | 0.634090 | 2:-71766082 | None:intergenic |
GTGAAGAAAGGGAACGTGGG+TGG | 0.642657 | 2:-71766095 | None:intergenic |
CAACAAGGTCCATATCAAAG+AGG | 0.642799 | 2:-71766169 | None:intergenic |
AATAATATTAGGATTCACGT+TGG | 0.648803 | 2:-71766117 | None:intergenic |
GTTGGTGAAGAAAGGGAACG+TGG | 0.649752 | 2:-71766099 | None:intergenic |
TTGGTGAAGAAAGGGAACGT+GGG | 0.709718 | 2:-71766098 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
! | AATAATATTAGGATTCACGT+TGG | - | Chr2:71766120-71766139 | None:intergenic | 25.0% |
! | TCAAGAACTGCAATAATATT+AGG | - | Chr2:71766131-71766150 | None:intergenic | 25.0% |
! | TGAATTTACGGGAAATATTA+GGG | + | Chr2:71766232-71766251 | MsG0280010583.01.T01:CDS | 25.0% |
! | TTGAATTTACGGGAAATATT+AGG | + | Chr2:71766231-71766250 | MsG0280010583.01.T01:CDS | 25.0% |
! | TGTTCCTAGTGTTGAATTTA+CGG | + | Chr2:71766220-71766239 | MsG0280010583.01.T01:CDS | 30.0% |
GACAAAAGAGATGTTCTAGT+TGG | + | Chr2:71766191-71766210 | MsG0280010583.01.T01:CDS | 35.0% | |
TTTACGGGAAATATTAGGGT+TGG | + | Chr2:71766236-71766255 | MsG0280010583.01.T01:CDS | 35.0% | |
TTTCCCGTAAATTCAACACT+AGG | - | Chr2:71766227-71766246 | None:intergenic | 35.0% | |
TTTCTCTCACCTCTTTGATA+TGG | + | Chr2:71766160-71766179 | MsG0280010583.01.T01:CDS | 35.0% | |
! | GAACATCTCTTTTGTCAACA+AGG | - | Chr2:71766187-71766206 | None:intergenic | 35.0% |
! | GTTCCTAGTGTTGAATTTAC+GGG | + | Chr2:71766221-71766240 | MsG0280010583.01.T01:CDS | 35.0% |
CAACAAGGTCCATATCAAAG+AGG | - | Chr2:71766172-71766191 | None:intergenic | 40.0% | |
TTCTGAACCTCAACATGCTA+AGG | + | Chr2:71766274-71766293 | MsG0280010583.01.T01:CDS | 40.0% | |
! | GATTCACGTTGGTGAAGAAA+GGG | - | Chr2:71766109-71766128 | None:intergenic | 40.0% |
AGTGGTACCTTAGCATGTTG+AGG | - | Chr2:71766284-71766303 | None:intergenic | 45.0% | |
TTGGTGAAGAAAGGGAACGT+GGG | - | Chr2:71766101-71766120 | None:intergenic | 45.0% | |
! | GGATTCACGTTGGTGAAGAA+AGG | - | Chr2:71766110-71766129 | None:intergenic | 45.0% |
ACGTGGGTGGAACATTGGTA+CGG | - | Chr2:71766085-71766104 | None:intergenic | 50.0% | |
! | GTTGGTGAAGAAAGGGAACG+TGG | - | Chr2:71766102-71766121 | None:intergenic | 50.0% |
AGGGAACGTGGGTGGAACAT+TGG | - | Chr2:71766090-71766109 | None:intergenic | 55.0% | |
GTGAAGAAAGGGAACGTGGG+TGG | - | Chr2:71766098-71766117 | None:intergenic | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr2 | gene | 71766056 | 71766307 | 71766056 | ID=MsG0280010583.01;Name=MsG0280010583.01 |
Chr2 | mRNA | 71766056 | 71766307 | 71766056 | ID=MsG0280010583.01.T01;Parent=MsG0280010583.01;Name=MsG0280010583.01.T01;_AED=0.47;_eAED=0.47;_QI=0|-1|0|1|-1|1|1|0|83 |
Chr2 | exon | 71766056 | 71766307 | 71766056 | ID=MsG0280010583.01.T01:exon:15174;Parent=MsG0280010583.01.T01 |
Chr2 | CDS | 71766056 | 71766307 | 71766056 | ID=MsG0280010583.01.T01:cds;Parent=MsG0280010583.01.T01 |
Gene Sequence |
Protein sequence |