Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480020838.01.T01 | XP_003606488.1 | 97.342 | 489 | 13 | 0 | 1 | 489 | 1 | 489 | 0 | 997 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480020838.01.T01 | G7JRG3 | 97.342 | 489 | 13 | 0 | 1 | 489 | 1 | 489 | 0.0 | 997 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048202.01 | MsG0480020838.01 | -0.805984 | 1.024941e-49 | 5.499378e-47 |
| MsG0080048887.01 | MsG0480020838.01 | 0.838944 | 2.128167e-57 | 2.894615e-54 |
| MsG0080048889.01 | MsG0480020838.01 | -0.823415 | 1.402111e-53 | 1.206359e-50 |
| MsG0080048896.01 | MsG0480020838.01 | 0.810943 | 8.963894e-51 | 5.477152e-48 |
| MsG0080048900.01 | MsG0480020838.01 | 0.804546 | 2.050877e-49 | 1.060356e-46 |
| MsG0080048918.01 | MsG0480020838.01 | 0.818867 | 1.566205e-52 | 1.186384e-49 |
| MsG0080048919.01 | MsG0480020838.01 | 0.850759 | 1.379149e-60 | 2.730143e-57 |
| MsG0080048986.01 | MsG0480020838.01 | 0.835347 | 1.768811e-56 | 2.157345e-53 |
| MsG0080048987.01 | MsG0480020838.01 | 0.810801 | 9.623404e-51 | 5.857260e-48 |
| MsG0080048992.01 | MsG0480020838.01 | 0.858318 | 8.947091e-63 | 2.274325e-59 |
| MsG0080049016.01 | MsG0480020838.01 | 0.817404 | 3.355371e-52 | 2.441353e-49 |
| MsG0080049018.01 | MsG0480020838.01 | 0.847033 | 1.493506e-59 | 2.620285e-56 |
| MsG0080049019.01 | MsG0480020838.01 | 0.824332 | 8.547483e-54 | 7.547658e-51 |
| MsG0080049023.01 | MsG0480020838.01 | 0.876884 | 9.785986e-69 | 4.823968e-65 |
| MsG0080049024.01 | MsG0480020838.01 | 0.813973 | 1.951383e-51 | 1.292922e-48 |
| MsG0080049038.01 | MsG0480020838.01 | 0.824592 | 7.426586e-54 | 6.608097e-51 |
| MsG0080049066.01 | MsG0480020838.01 | 0.816216 | 6.199041e-52 | 4.366155e-49 |
| MsG0080049133.01 | MsG0480020838.01 | 0.849973 | 2.291626e-60 | 4.421058e-57 |
| MsG0180000322.01 | MsG0480020838.01 | 0.812610 | 3.887049e-51 | 2.482694e-48 |
| MsG0180000337.01 | MsG0480020838.01 | -0.807345 | 5.290169e-50 | 2.939400e-47 |
| MsG0180000417.01 | MsG0480020838.01 | 0.843388 | 1.445117e-58 | 2.257641e-55 |
| MsG0180000423.01 | MsG0480020838.01 | 0.811410 | 7.101054e-51 | 4.392431e-48 |
| MsG0180000551.01 | MsG0480020838.01 | -0.818566 | 1.833368e-52 | 1.377165e-49 |
| MsG0180000552.01 | MsG0480020838.01 | -0.844034 | 9.707393e-59 | 1.547585e-55 |
| MsG0180000719.01 | MsG0480020838.01 | 0.847773 | 9.352075e-60 | 1.679953e-56 |
| MsG0180000786.01 | MsG0480020838.01 | 0.842920 | 1.926019e-58 | 2.964225e-55 |
| MsG0180001054.01 | MsG0480020838.01 | 0.820340 | 7.223430e-53 | 5.700024e-50 |
| MsG0180001116.01 | MsG0480020838.01 | 0.822502 | 2.288800e-53 | 1.919275e-50 |
| MsG0180001484.01 | MsG0480020838.01 | 0.851335 | 9.490579e-61 | 1.914726e-57 |
| MsG0180001615.01 | MsG0480020838.01 | 0.855531 | 5.925821e-62 | 1.372316e-58 |
| MsG0180001925.01 | MsG0480020838.01 | 0.815010 | 1.150934e-51 | 7.842915e-49 |
| MsG0180002021.01 | MsG0480020838.01 | 0.805918 | 1.058608e-49 | 5.670090e-47 |
| MsG0180002099.01 | MsG0480020838.01 | 0.853330 | 2.566415e-61 | 5.525478e-58 |
| MsG0180002425.01 | MsG0480020838.01 | 0.821296 | 4.354771e-53 | 3.528787e-50 |
| MsG0180002426.01 | MsG0480020838.01 | 0.815703 | 8.068913e-52 | 5.603805e-49 |
| MsG0180002454.01 | MsG0480020838.01 | 0.806396 | 8.394152e-50 | 4.551097e-47 |
| MsG0180002463.01 | MsG0480020838.01 | 0.822309 | 2.538095e-53 | 2.116625e-50 |
| MsG0180002809.01 | MsG0480020838.01 | 0.805952 | 1.041323e-49 | 5.582379e-47 |
| MsG0180002982.01 | MsG0480020838.01 | 0.827900 | 1.211541e-54 | 1.185448e-51 |
| MsG0180003114.01 | MsG0480020838.01 | 0.828313 | 9.634706e-55 | 9.541450e-52 |
| MsG0180003350.01 | MsG0480020838.01 | 0.875508 | 2.916889e-68 | 1.365248e-64 |
| MsG0180003351.01 | MsG0480020838.01 | 0.875129 | 3.930827e-68 | 1.815016e-64 |
| MsG0180003405.01 | MsG0480020838.01 | 0.821830 | 3.276763e-53 | 2.695594e-50 |
| MsG0180003617.01 | MsG0480020838.01 | 0.817898 | 2.597357e-52 | 1.915480e-49 |
| MsG0180003757.01 | MsG0480020838.01 | 0.812438 | 4.239740e-51 | 2.695895e-48 |
| MsG0180003758.01 | MsG0480020838.01 | 0.867684 | 1.141110e-65 | 4.018618e-62 |
| MsG0180003880.01 | MsG0480020838.01 | 0.803853 | 2.859009e-49 | 1.452165e-46 |
| MsG0180004124.01 | MsG0480020838.01 | 0.819568 | 1.084927e-52 | 8.379194e-50 |
| MsG0180004125.01 | MsG0480020838.01 | 0.820432 | 6.882017e-53 | 5.444602e-50 |
| MsG0180004193.01 | MsG0480020838.01 | 0.802681 | 4.998020e-49 | 2.463474e-46 |
| MsG0180004322.01 | MsG0480020838.01 | 0.813394 | 2.616590e-51 | 1.706796e-48 |
| MsG0180004458.01 | MsG0480020838.01 | 0.822754 | 1.999951e-53 | 1.689175e-50 |
| MsG0180004502.01 | MsG0480020838.01 | 0.825514 | 4.498229e-54 | 4.108728e-51 |
| MsG0180004553.01 | MsG0480020838.01 | 0.834395 | 3.072186e-56 | 3.641220e-53 |
| MsG0180004580.01 | MsG0480020838.01 | 0.836991 | 6.763538e-57 | 8.666699e-54 |
| MsG0180004581.01 | MsG0480020838.01 | 0.843567 | 1.294591e-58 | 2.033758e-55 |
| MsG0180004731.01 | MsG0480020838.01 | 0.842181 | 3.024996e-58 | 4.549382e-55 |
| MsG0180004737.01 | MsG0480020838.01 | 0.840637 | 7.711986e-58 | 1.105285e-54 |
| MsG0180004773.01 | MsG0480020838.01 | 0.874500 | 6.433342e-68 | 2.902801e-64 |
| MsG0180004787.01 | MsG0480020838.01 | 0.841387 | 4.902411e-58 | 7.192076e-55 |
| MsG0180005242.01 | MsG0480020838.01 | 0.803144 | 4.009843e-49 | 1.999844e-46 |
| MsG0180005272.01 | MsG0480020838.01 | -0.820942 | 5.254207e-53 | 4.216133e-50 |
| MsG0180005474.01 | MsG0480020838.01 | 0.857941 | 1.157823e-62 | 2.906528e-59 |
| MsG0180005516.01 | MsG0480020838.01 | 0.851841 | 6.822461e-61 | 1.398736e-57 |
| MsG0180005613.01 | MsG0480020838.01 | 0.843379 | 1.452969e-58 | 2.269287e-55 |
| MsG0180005672.01 | MsG0480020838.01 | 0.846365 | 2.273630e-59 | 3.904032e-56 |
| MsG0180005767.01 | MsG0480020838.01 | 0.805928 | 1.053457e-49 | 5.643972e-47 |
| MsG0180005791.01 | MsG0480020838.01 | 0.835759 | 1.391983e-56 | 1.718633e-53 |
| MsG0180005833.01 | MsG0480020838.01 | 0.841762 | 3.903745e-58 | 5.793989e-55 |
| MsG0180005839.01 | MsG0480020838.01 | 0.818454 | 1.943517e-52 | 1.455574e-49 |
| MsG0180005848.01 | MsG0480020838.01 | 0.820041 | 8.456291e-53 | 6.618359e-50 |
| MsG0180005865.01 | MsG0480020838.01 | -0.804513 | 2.083381e-49 | 1.076222e-46 |
| MsG0180006063.01 | MsG0480020838.01 | 0.811361 | 7.275489e-51 | 4.494240e-48 |
| MsG0180006212.01 | MsG0480020838.01 | 0.813783 | 2.149098e-51 | 1.416607e-48 |
| MsG0180006227.01 | MsG0480020838.01 | 0.875072 | 4.109847e-68 | 1.894062e-64 |
| MsG0180006239.01 | MsG0480020838.01 | 0.842949 | 1.891132e-58 | 2.913236e-55 |
| MsG0280006381.01 | MsG0480020838.01 | 0.836994 | 6.753525e-57 | 8.654586e-54 |
| MsG0280006451.01 | MsG0480020838.01 | 0.807823 | 4.186778e-50 | 2.355420e-47 |
| MsG0280010583.01 | MsG0480020838.01 | 0.856853 | 2.429686e-62 | 5.878134e-59 |
| MsG0280010584.01 | MsG0480020838.01 | 0.828006 | 1.142567e-54 | 1.121516e-51 |
| MsG0280010605.01 | MsG0480020838.01 | 0.801924 | 7.157079e-49 | 3.460238e-46 |
| MsG0280010606.01 | MsG0480020838.01 | 0.837953 | 3.833419e-57 | 5.059463e-54 |
| MsG0280011066.01 | MsG0480020838.01 | 0.844364 | 7.915013e-59 | 1.274761e-55 |
| MsG0280011165.01 | MsG0480020838.01 | -0.800699 | 1.275260e-48 | 5.977155e-46 |
| MsG0280011169.01 | MsG0480020838.01 | 0.802909 | 4.485849e-49 | 2.223920e-46 |
| MsG0280011189.01 | MsG0480020838.01 | 0.803993 | 2.673430e-49 | 1.362838e-46 |
| MsG0280011207.01 | MsG0480020838.01 | 0.810776 | 9.742691e-51 | 5.926171e-48 |
| MsG0280011281.01 | MsG0480020838.01 | 0.855673 | 5.389454e-62 | 1.254068e-58 |
| MsG0280011459.01 | MsG0480020838.01 | 0.812624 | 3.860022e-51 | 2.466336e-48 |
| MsG0380012065.01 | MsG0480020838.01 | 0.805879 | 1.078804e-49 | 5.772451e-47 |
| MsG0380012148.01 | MsG0480020838.01 | 0.854734 | 1.010302e-61 | 2.278537e-58 |
| MsG0380012602.01 | MsG0480020838.01 | 0.826063 | 3.331730e-54 | 3.091338e-51 |
| MsG0380013114.01 | MsG0480020838.01 | 0.837466 | 5.113228e-57 | 6.647631e-54 |
| MsG0380013501.01 | MsG0480020838.01 | 0.841086 | 5.879845e-58 | 8.544210e-55 |
| MsG0380014129.01 | MsG0480020838.01 | 0.811362 | 7.272620e-51 | 4.492554e-48 |
| MsG0380014231.01 | MsG0480020838.01 | 0.829667 | 4.527537e-55 | 4.665128e-52 |
| MsG0380014639.01 | MsG0480020838.01 | 0.847085 | 1.445425e-59 | 2.540466e-56 |
| MsG0380014642.01 | MsG0480020838.01 | 0.845134 | 4.908045e-59 | 8.098975e-56 |
| MsG0380014735.01 | MsG0480020838.01 | 0.874776 | 5.183056e-68 | 2.362649e-64 |
| MsG0380014890.01 | MsG0480020838.01 | 0.860724 | 1.691558e-63 | 4.669635e-60 |
| MsG0480018463.01 | MsG0480020838.01 | 0.821763 | 3.396490e-53 | 2.788596e-50 |
| MsG0480018494.01 | MsG0480020838.01 | 0.838681 | 2.488608e-57 | 3.358059e-54 |
| MsG0480018628.01 | MsG0480020838.01 | 0.807617 | 4.631956e-50 | 2.591834e-47 |
| MsG0480018658.01 | MsG0480020838.01 | 0.806844 | 6.751588e-50 | 3.703109e-47 |
| MsG0480018713.01 | MsG0480020838.01 | 0.810676 | 1.024083e-50 | 6.212454e-48 |
| MsG0480018840.01 | MsG0480020838.01 | 0.840204 | 1.001054e-57 | 1.415694e-54 |
| MsG0480019045.01 | MsG0480020838.01 | 0.821981 | 3.023844e-53 | 2.498053e-50 |
| MsG0480019046.01 | MsG0480020838.01 | 0.840390 | 8.951988e-58 | 1.273293e-54 |
| MsG0480019183.01 | MsG0480020838.01 | 0.863661 | 2.122411e-64 | 6.485145e-61 |
| MsG0480019861.01 | MsG0480020838.01 | 0.807293 | 5.425350e-50 | 3.010478e-47 |
| MsG0480020072.01 | MsG0480020838.01 | 0.862413 | 5.156722e-64 | 1.509008e-60 |
| MsG0480020076.01 | MsG0480020838.01 | 0.873218 | 1.743283e-67 | 7.506346e-64 |
| MsG0480020269.01 | MsG0480020838.01 | 0.854461 | 1.212218e-61 | 2.709151e-58 |
| MsG0480020393.01 | MsG0480020838.01 | 0.806157 | 9.428686e-50 | 5.081198e-47 |
| MsG0480020550.01 | MsG0480020838.01 | 0.844140 | 9.090410e-59 | 1.454021e-55 |
| MsG0480020838.01 | MsG0480020841.01 | 0.802525 | 5.383282e-49 | 2.642776e-46 |
| MsG0480020838.01 | MsG0480020842.01 | 0.807148 | 5.822513e-50 | 3.218628e-47 |
| MsG0480020838.01 | MsG0480021086.01 | 0.816049 | 6.756940e-52 | 4.737405e-49 |
| MsG0480020838.01 | MsG0480021169.01 | 0.832899 | 7.263733e-56 | 8.231089e-53 |
| MsG0480020838.01 | MsG0480021327.01 | 0.836084 | 1.151051e-56 | 1.435286e-53 |
| MsG0480020838.01 | MsG0480021331.01 | 0.831371 | 1.733543e-55 | 1.877478e-52 |
| MsG0480020838.01 | MsG0480021474.01 | 0.835390 | 1.725291e-56 | 2.106832e-53 |
| MsG0480020838.01 | MsG0480021563.01 | 0.841889 | 3.612922e-58 | 5.383892e-55 |
| MsG0480020838.01 | MsG0480022002.01 | 0.861705 | 8.500952e-64 | 2.426413e-60 |
| MsG0480020838.01 | MsG0480022411.01 | 0.818926 | 1.519224e-52 | 1.152761e-49 |
| MsG0480020838.01 | MsG0480022412.01 | 0.805177 | 1.513935e-49 | 7.955989e-47 |
| MsG0480020838.01 | MsG0480022581.01 | 0.817571 | 3.077025e-52 | 2.248987e-49 |
| MsG0480020838.01 | MsG0480022591.01 | 0.820661 | 6.096637e-53 | 4.853467e-50 |
| MsG0480020838.01 | MsG0480022626.01 | 0.832696 | 8.159915e-56 | 9.190933e-53 |
| MsG0480020838.01 | MsG0480022655.01 | -0.813050 | 3.114406e-51 | 2.012437e-48 |
| MsG0480020838.01 | MsG0480022687.01 | 0.811828 | 5.758161e-51 | 3.601198e-48 |
| MsG0480020838.01 | MsG0480022721.01 | -0.817399 | 3.365240e-52 | 2.448143e-49 |
| MsG0480020838.01 | MsG0480022935.01 | 0.889639 | 2.023247e-73 | 1.646093e-69 |
| MsG0480020838.01 | MsG0480022968.01 | -0.815791 | 7.715450e-52 | 5.371397e-49 |
| MsG0480020838.01 | MsG0480023056.01 | 0.844075 | 9.463666e-59 | 1.510595e-55 |
| MsG0480020838.01 | MsG0480023103.01 | 0.810399 | 1.175313e-50 | 7.076955e-48 |
| MsG0480020838.01 | MsG0480023148.01 | 0.810448 | 1.146964e-50 | 6.915381e-48 |
| MsG0480020838.01 | MsG0480023152.01 | 0.876098 | 1.828337e-68 | 8.752335e-65 |
| MsG0480020838.01 | MsG0480023211.01 | 0.840840 | 6.825313e-58 | 9.844077e-55 |
| MsG0480020838.01 | MsG0480023217.01 | 0.805748 | 1.149370e-49 | 6.129781e-47 |
| MsG0480020838.01 | MsG0480023242.01 | 0.867732 | 1.101777e-65 | 3.886703e-62 |
| MsG0480020838.01 | MsG0480023244.01 | 0.846083 | 2.713653e-59 | 4.617165e-56 |
| MsG0480020838.01 | MsG0480023344.01 | 0.838713 | 2.442417e-57 | 3.299183e-54 |
| MsG0480020838.01 | MsG0480023376.01 | 0.800325 | 1.519758e-48 | 7.056408e-46 |
| MsG0480020838.01 | MsG0480023469.01 | 0.834193 | 3.452139e-56 | 4.066318e-53 |
| MsG0480020838.01 | MsG0480023481.01 | 0.803158 | 3.983465e-49 | 1.987455e-46 |
| MsG0480020838.01 | MsG0480023482.01 | 0.813522 | 2.452652e-51 | 1.605384e-48 |
| MsG0480020838.01 | MsG0480023528.01 | -0.820531 | 6.529532e-53 | 5.179760e-50 |
| MsG0480020838.01 | MsG0480023577.01 | 0.833993 | 3.876125e-56 | 4.539036e-53 |
| MsG0480020838.01 | MsG0480023695.01 | 0.871027 | 9.344457e-67 | 3.712897e-63 |
| MsG0480020838.01 | MsG0480023705.01 | 0.806865 | 6.684466e-50 | 3.668183e-47 |
| MsG0480020838.01 | MsG0480023818.01 | 0.824875 | 6.367874e-54 | 5.712233e-51 |
| MsG0480020838.01 | MsG0480023850.01 | 0.844523 | 7.174219e-59 | 1.161342e-55 |
| MsG0480020838.01 | MsG0580024269.01 | 0.810211 | 1.290141e-50 | 7.730072e-48 |
| MsG0480020838.01 | MsG0580024278.01 | 0.859936 | 2.929316e-63 | 7.870111e-60 |
| MsG0480020838.01 | MsG0580024372.01 | 0.815942 | 7.139184e-52 | 4.990344e-49 |
| MsG0480020838.01 | MsG0580024386.01 | 0.818827 | 1.599446e-52 | 1.210190e-49 |
| MsG0480020838.01 | MsG0580024398.01 | -0.824114 | 9.616816e-54 | 8.439695e-51 |
| MsG0480020838.01 | MsG0580024442.01 | 0.866055 | 3.770357e-65 | 1.253671e-61 |
| MsG0480020838.01 | MsG0580024493.01 | 0.851408 | 9.047978e-61 | 1.829764e-57 |
| MsG0480020838.01 | MsG0580024496.01 | 0.809580 | 1.763721e-50 | 1.039511e-47 |
| MsG0480020838.01 | MsG0580024688.01 | 0.828778 | 7.440177e-55 | 7.468228e-52 |
| MsG0480020838.01 | MsG0580024768.01 | 0.839806 | 1.271059e-57 | 1.775308e-54 |
| MsG0480020838.01 | MsG0580024804.01 | 0.832704 | 8.121672e-56 | 9.150101e-53 |
| MsG0480020838.01 | MsG0580025105.01 | 0.839390 | 1.630409e-57 | 2.248407e-54 |
| MsG0480020838.01 | MsG0580025259.01 | 0.809491 | 1.843457e-50 | 1.083848e-47 |
| MsG0480020838.01 | MsG0580025317.01 | 0.864916 | 8.617584e-65 | 2.751386e-61 |
| MsG0480020838.01 | MsG0580025392.01 | 0.813374 | 2.644264e-51 | 1.723851e-48 |
| MsG0480020838.01 | MsG0580025447.01 | 0.845354 | 4.280008e-59 | 7.113475e-56 |
| MsG0480020838.01 | MsG0580025486.01 | 0.805580 | 1.246315e-49 | 6.617751e-47 |
| MsG0480020838.01 | MsG0580026362.01 | 0.851321 | 9.577740e-61 | 1.931497e-57 |
| MsG0480020838.01 | MsG0580027276.01 | 0.812997 | 3.198556e-51 | 2.063930e-48 |
| MsG0480020838.01 | MsG0580027325.01 | 0.821906 | 3.146306e-53 | 2.593849e-50 |
| MsG0480020838.01 | MsG0580027646.01 | -0.811610 | 6.422230e-51 | 3.993342e-48 |
| MsG0480020838.01 | MsG0580027761.01 | 0.813452 | 2.540948e-51 | 1.660106e-48 |
| MsG0480020838.01 | MsG0580028013.01 | 0.801215 | 1.000186e-48 | 4.749806e-46 |
| MsG0480020838.01 | MsG0580028159.01 | 0.837467 | 5.109429e-57 | 6.643074e-54 |
| MsG0480020838.01 | MsG0580028398.01 | 0.800944 | 1.136502e-48 | 5.360386e-46 |
| MsG0480020838.01 | MsG0580029296.01 | -0.805993 | 1.020493e-49 | 5.476750e-47 |
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| MsG0280010455.01 | MsG0480020838.01 | 0.858802 | 6.413239e-63 | 1.657039e-59 |
| MsG0280010461.01 | MsG0480020838.01 | 0.825581 | 4.336749e-54 | 3.968926e-51 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480020838.01.T01 | MTR_4g060900 | 97.342 | 489 | 13 | 0 | 1 | 489 | 1 | 489 | 0.0 | 997 |
| MsG0480020838.01.T01 | MTR_7g100780 | 57.240 | 442 | 179 | 4 | 16 | 455 | 56 | 489 | 0.0 | 553 |
| MsG0480020838.01.T01 | MTR_4g053620 | 32.456 | 342 | 180 | 10 | 104 | 434 | 30 | 331 | 1.56e-42 | 155 |
| MsG0480020838.01.T01 | MTR_1g060150 | 31.065 | 338 | 197 | 8 | 119 | 450 | 68 | 375 | 2.91e-40 | 149 |
| MsG0480020838.01.T01 | MTR_3g104770 | 32.087 | 321 | 174 | 11 | 123 | 434 | 129 | 414 | 5.02e-40 | 149 |
| MsG0480020838.01.T01 | MTR_1g060130 | 29.223 | 373 | 221 | 10 | 86 | 450 | 38 | 375 | 6.32e-39 | 145 |
| MsG0480020838.01.T01 | MTR_2g086290 | 29.664 | 327 | 198 | 8 | 119 | 443 | 36 | 332 | 7.41e-39 | 144 |
| MsG0480020838.01.T01 | MTR_2g086300 | 32.036 | 334 | 187 | 12 | 122 | 449 | 47 | 346 | 7.34e-38 | 142 |
| MsG0480020838.01.T01 | MTR_1g050458 | 28.834 | 326 | 181 | 8 | 119 | 430 | 36 | 324 | 2.53e-35 | 135 |
| MsG0480020838.01.T01 | MTR_1g050458 | 44.444 | 135 | 72 | 2 | 119 | 250 | 36 | 170 | 7.15e-29 | 116 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480020838.01.T01 | AT3G09690 | 60.089 | 451 | 171 | 3 | 9 | 457 | 57 | 500 | 0.0 | 583 |
| MsG0480020838.01.T01 | AT3G09690 | 60.089 | 451 | 171 | 3 | 9 | 457 | 57 | 500 | 0.0 | 583 |
| MsG0480020838.01.T01 | AT5G02970 | 56.182 | 461 | 193 | 3 | 13 | 471 | 58 | 511 | 0.0 | 556 |
| MsG0480020838.01.T01 | AT5G22460 | 28.531 | 354 | 210 | 8 | 88 | 430 | 1 | 322 | 2.10e-40 | 149 |
| MsG0480020838.01.T01 | AT5G22460 | 28.531 | 354 | 210 | 8 | 88 | 430 | 1 | 322 | 2.10e-40 | 149 |
| MsG0480020838.01.T01 | AT5G22460 | 28.531 | 354 | 210 | 8 | 88 | 430 | 1 | 322 | 2.10e-40 | 149 |
| MsG0480020838.01.T01 | AT3G44510 | 32.424 | 330 | 184 | 12 | 124 | 444 | 8 | 307 | 3.33e-39 | 145 |
| MsG0480020838.01.T01 | AT3G54240 | 27.893 | 337 | 212 | 6 | 119 | 452 | 40 | 348 | 8.57e-39 | 144 |
| MsG0480020838.01.T01 | AT1G74280 | 29.358 | 327 | 179 | 6 | 119 | 430 | 56 | 345 | 6.74e-38 | 142 |
| MsG0480020838.01.T01 | AT2G36290 | 30.636 | 346 | 206 | 9 | 93 | 430 | 8 | 327 | 1.07e-36 | 139 |
| MsG0480020838.01.T01 | AT2G36290 | 30.460 | 348 | 204 | 10 | 93 | 430 | 22 | 341 | 1.95e-36 | 138 |
| MsG0480020838.01.T01 | AT1G08310 | 30.145 | 345 | 176 | 10 | 119 | 444 | 5 | 303 | 1.34e-35 | 135 |
| MsG0480020838.01.T01 | AT3G44510 | 43.094 | 181 | 85 | 6 | 124 | 296 | 8 | 178 | 2.08e-35 | 132 |
| MsG0480020838.01.T01 | AT1G08310 | 30.058 | 346 | 178 | 10 | 119 | 444 | 5 | 306 | 3.43e-35 | 134 |
| MsG0480020838.01.T01 | AT1G74290 | 29.595 | 321 | 187 | 7 | 119 | 430 | 56 | 346 | 2.14e-33 | 130 |
| MsG0480020838.01.T01 | AT1G74300 | 29.012 | 324 | 184 | 6 | 119 | 430 | 39 | 328 | 2.91e-33 | 129 |
| MsG0480020838.01.T01 | AT3G03240 | 28.481 | 316 | 185 | 9 | 122 | 430 | 35 | 316 | 6.60e-32 | 125 |
| MsG0480020838.01.T01 | AT3G48410 | 27.249 | 389 | 211 | 12 | 82 | 448 | 33 | 371 | 2.12e-30 | 122 |
| MsG0480020838.01.T01 | AT3G48410 | 27.688 | 372 | 199 | 11 | 82 | 431 | 75 | 398 | 3.02e-30 | 122 |
| MsG0480020838.01.T01 | AT1G08310 | 47.368 | 133 | 68 | 2 | 119 | 250 | 5 | 136 | 8.25e-30 | 117 |
| MsG0480020838.01.T01 | AT3G03230 | 27.097 | 310 | 196 | 6 | 122 | 430 | 35 | 315 | 2.64e-29 | 118 |
| MsG0480020838.01.T01 | AT1G74300 | 27.376 | 263 | 147 | 5 | 178 | 430 | 1 | 229 | 2.48e-22 | 96.3 |
Find 122 sgRNAs with CRISPR-Local
Find 314 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTTCATTGTTAAGAAATT+TGG | 0.136021 | 4:-49441257 | MsG0480020838.01.T01:CDS |
| ACAAAAGGAATGTGCTTAAT+TGG | 0.161569 | 4:-49438360 | MsG0480020838.01.T01:CDS |
| TATCAGCGAAGTTTCTTATC+AGG | 0.205500 | 4:-49438874 | MsG0480020838.01.T01:CDS |
| CTCTTGGTGTTGACAAGTTT+TGG | 0.207857 | 4:-49439618 | MsG0480020838.01.T01:CDS |
| CAAGTTCAACGTTGGCTTCT+AGG | 0.207888 | 4:+49437284 | None:intergenic |
| ATCCAATCTATGAGGATTTC+TGG | 0.211014 | 4:-49438504 | MsG0480020838.01.T01:CDS |
| TGTGGAGGAAGCTGCTTTGC+AGG | 0.230425 | 4:-49438434 | MsG0480020838.01.T01:CDS |
| TTCCTTTCCTCTCGGCTTGC+AGG | 0.230918 | 4:-49439891 | MsG0480020838.01.T01:intron |
| TGCTTTGCAGGTCTCGAATT+GGG | 0.231694 | 4:-49438422 | MsG0480020838.01.T01:CDS |
| CACTGAAACTCAGGAGTATA+CGG | 0.248631 | 4:-49438323 | MsG0480020838.01.T01:CDS |
| CGAAGCTTTCCTAGACTTCT+TGG | 0.254206 | 4:-49438904 | MsG0480020838.01.T01:CDS |
| ACGTTGGCTTCTAGGGTAAT+TGG | 0.261598 | 4:+49437292 | None:intergenic |
| CTAACTGTAGAATTCTTAAA+AGG | 0.264307 | 4:-49441320 | MsG0480020838.01.T01:CDS |
| GTTAAGAAATTTGGAAAGAT+TGG | 0.278897 | 4:-49441248 | MsG0480020838.01.T01:CDS |
| ACTTATGATCTGCCTGGTTT+TGG | 0.280877 | 4:-49439709 | MsG0480020838.01.T01:CDS |
| CATATAATTTGTGATGATAT+TGG | 0.288185 | 4:+49437165 | None:intergenic |
| TGAGGCTGAGAGGGCCTTGC+GGG | 0.293815 | 4:+49437335 | None:intergenic |
| TCCTCATCCCAAACGAAATC+TGG | 0.315816 | 4:-49439677 | MsG0480020838.01.T01:CDS |
| TTAATACCTGCAAGTCTATC+AGG | 0.327430 | 4:+49439541 | None:intergenic |
| TGACGATTCCAGATTTCGTT+TGG | 0.334193 | 4:+49439669 | None:intergenic |
| TCTGCAACTTGAGGTCTAAA+AGG | 0.346212 | 4:+49438392 | None:intergenic |
| CTGCTTTGCAGGTCTCGAAT+TGG | 0.353135 | 4:-49438423 | MsG0480020838.01.T01:CDS |
| CGTTTGAAATTAGGAATTCC+TGG | 0.355664 | 4:-49439775 | MsG0480020838.01.T01:intron |
| TACATACCTGATAGACTTGC+AGG | 0.361619 | 4:-49439547 | MsG0480020838.01.T01:intron |
| TGCTACCCGCATTATGCTTC+CGG | 0.364526 | 4:-49439991 | MsG0480020838.01.T01:CDS |
| TGCCAGAAATCCTCATAGAT+TGG | 0.373531 | 4:+49438502 | None:intergenic |
| TTTGTCATCAAAGGATCATA+TGG | 0.395653 | 4:+49438991 | None:intergenic |
| CAGGAGTATACGGGATTTCT+CGG | 0.400274 | 4:-49438313 | MsG0480020838.01.T01:CDS |
| GACGATTCCAGATTTCGTTT+GGG | 0.408411 | 4:+49439670 | None:intergenic |
| CTCATACTTTCCTTTCCTCT+CGG | 0.410239 | 4:-49439899 | MsG0480020838.01.T01:CDS |
| ATGATATTGGCCAGAACAAC+GGG | 0.413247 | 4:+49437178 | None:intergenic |
| GTTTCTTTACTTGCTTTCTC+AGG | 0.414312 | 4:-49441116 | MsG0480020838.01.T01:intron |
| CAAGTGGAAGCAAGCATGCT+TGG | 0.416127 | 4:-49439582 | MsG0480020838.01.T01:CDS |
| GACGAAGAACCTGGAACAAA+TGG | 0.419319 | 4:-49438960 | MsG0480020838.01.T01:CDS |
| GGGATGTGGAAGAATCAATT+AGG | 0.420004 | 4:-49438477 | MsG0480020838.01.T01:CDS |
| GAATGTGCTTAATTGGCTTA+AGG | 0.424123 | 4:-49438353 | MsG0480020838.01.T01:CDS |
| TGAAGTGGGTCTTTATCTTC+AGG | 0.424536 | 4:+49441161 | None:intergenic |
| ATACAAGGAGCAAGGTGTTT+CGG | 0.426151 | 4:-49439952 | MsG0480020838.01.T01:CDS |
| CTCTCTTCGTTTGTCATCAA+AGG | 0.426304 | 4:+49438982 | None:intergenic |
| TTAAGAAATTTGGAAAGATT+GGG | 0.427485 | 4:-49441247 | MsG0480020838.01.T01:CDS |
| AAAAGTATATATATGTGAAA+TGG | 0.431214 | 4:+49437401 | None:intergenic |
| TGTGTAAGAGAGTTCATGAT+TGG | 0.436128 | 4:-49441353 | MsG0480020838.01.T01:CDS |
| GATTCACTGATGGAAGAGTT+TGG | 0.439690 | 4:-49439745 | MsG0480020838.01.T01:CDS |
| CTCACTTGCCATATGTGTAT+TGG | 0.440378 | 4:+49438289 | None:intergenic |
| AGGTGGCTGTCTTTATCTCT+TGG | 0.445446 | 4:-49438832 | MsG0480020838.01.T01:CDS |
| TAGTCTGATATGACAACAAT+TGG | 0.449971 | 4:-49437045 | MsG0480020838.01.T01:three_prime_UTR |
| ACGAAGAGAGACGAAGAACC+TGG | 0.455949 | 4:-49438969 | MsG0480020838.01.T01:CDS |
| AAGTTCAACGTTGGCTTCTA+GGG | 0.458277 | 4:+49437285 | None:intergenic |
| TCCAGATTTCGTTTGGGATG+AGG | 0.462321 | 4:+49439676 | None:intergenic |
| AAGTGGAAGCAAGCATGCTT+GGG | 0.466214 | 4:-49439581 | MsG0480020838.01.T01:CDS |
| TATGTGAAATGGCCTTCATA+TGG | 0.467837 | 4:+49437412 | None:intergenic |
| GGATCATATGGGTTCACCAT+GGG | 0.473212 | 4:+49439003 | None:intergenic |
| TTCTCGGTCCAATACACATA+TGG | 0.474933 | 4:-49438297 | MsG0480020838.01.T01:CDS |
| GGAAGCATGGTCAGATTGAC+AGG | 0.481984 | 4:-49438852 | MsG0480020838.01.T01:CDS |
| TTGATTACTTATGATCTGCC+TGG | 0.485276 | 4:-49439715 | MsG0480020838.01.T01:CDS |
| GTGTAAGAGAGTTCATGATT+GGG | 0.487800 | 4:-49441352 | MsG0480020838.01.T01:CDS |
| ATAAAGACCCACTTCATGCT+TGG | 0.491569 | 4:-49441154 | MsG0480020838.01.T01:CDS |
| TTTGTGCATCGCGTACTACC+TGG | 0.493610 | 4:-49437454 | MsG0480020838.01.T01:CDS |
| AGTTTGTGTACTGCAGCTCC+AGG | 0.498358 | 4:+49437436 | None:intergenic |
| TGCAGAAACGAAAATACAAA+AGG | 0.502548 | 4:-49438375 | MsG0480020838.01.T01:CDS |
| TGGAAGATACATGGCATACA+AGG | 0.504189 | 4:-49439967 | MsG0480020838.01.T01:CDS |
| GCACAAAATCAGTCATTGAC+GGG | 0.504891 | 4:+49437470 | None:intergenic |
| CTATGAGGATTTCTGGCAAA+GGG | 0.505065 | 4:-49438497 | MsG0480020838.01.T01:CDS |
| GTCTTTATCTCTTGGAAAGA+GGG | 0.506713 | 4:-49438824 | MsG0480020838.01.T01:intron |
| GGATTTCTGGCAAAGGGATG+TGG | 0.507209 | 4:-49438491 | MsG0480020838.01.T01:CDS |
| CGAGAGGAAAGGAAAGTATG+AGG | 0.512168 | 4:+49439900 | None:intergenic |
| AAAATACTTGCTTCTCAAGT+GGG | 0.518790 | 4:+49440027 | None:intergenic |
| TGTCTTTATCTCTTGGAAAG+AGG | 0.519291 | 4:-49438825 | MsG0480020838.01.T01:CDS |
| GCTTTGCAGGTCTCGAATTG+GGG | 0.522101 | 4:-49438421 | MsG0480020838.01.T01:CDS |
| AAAGCAGCTTCCTCCACAAA+GGG | 0.525187 | 4:+49438439 | None:intergenic |
| TCTTTCCTATGCTGCTCCAT+CGG | 0.526421 | 4:+49437109 | None:intergenic |
| TTGTCATCAAAGGATCATAT+GGG | 0.529008 | 4:+49438992 | None:intergenic |
| TAGAAGAAACCAAGAAGTCT+AGG | 0.529335 | 4:+49438895 | None:intergenic |
| TGTAAGAGAGTTCATGATTG+GGG | 0.530248 | 4:-49441351 | MsG0480020838.01.T01:CDS |
| ATGTGAAATGGCCTTCATAT+GGG | 0.532028 | 4:+49437413 | None:intergenic |
| ATCAGCGAAGTTTCTTATCA+GGG | 0.532446 | 4:-49438873 | MsG0480020838.01.T01:CDS |
| TATGCCATGTATCTTCCATC+CGG | 0.539640 | 4:+49439972 | None:intergenic |
| ATAATGCGGGTAGCACTAGC+AGG | 0.539782 | 4:+49439999 | None:intergenic |
| CATCTCCGATGGAGCAGCAT+AGG | 0.540320 | 4:-49437114 | MsG0480020838.01.T01:three_prime_UTR |
| AAGAAATGCTGAGGCTGAGA+GGG | 0.556389 | 4:+49437326 | None:intergenic |
| CTGAGGCTGAGAGGGCCTTG+CGG | 0.559279 | 4:+49437334 | None:intergenic |
| TTGCTGTTCAAGTTCAACGT+TGG | 0.561905 | 4:+49437276 | None:intergenic |
| TAGTTGAGCTTCATCTCCGA+TGG | 0.565207 | 4:-49437125 | MsG0480020838.01.T01:three_prime_UTR |
| TGGATCATTGGTTACTCAAG+TGG | 0.565359 | 4:-49439598 | MsG0480020838.01.T01:CDS |
| TGGTGTTAAAGATTCACTGA+TGG | 0.566190 | 4:-49439755 | MsG0480020838.01.T01:CDS |
| ACTGAAACTCAGGAGTATAC+GGG | 0.566332 | 4:-49438322 | MsG0480020838.01.T01:CDS |
| ATCAGTGAATCTTTAACACC+AGG | 0.570063 | 4:+49439757 | None:intergenic |
| CAAAGCAGCTTCCTCCACAA+AGG | 0.573514 | 4:+49438438 | None:intergenic |
| GATGGAAGATCCAATCTATG+AGG | 0.573832 | 4:-49438512 | MsG0480020838.01.T01:CDS |
| TGCACAAAATCAGTCATTGA+CGG | 0.575384 | 4:+49437469 | None:intergenic |
| ATGACAAACCAAGCATGAAG+TGG | 0.579236 | 4:+49441146 | None:intergenic |
| TCCATCCGGAAGCATAATGC+GGG | 0.582006 | 4:+49439986 | None:intergenic |
| GTACACAAACTCCCATATGA+AGG | 0.587384 | 4:-49437424 | MsG0480020838.01.T01:CDS |
| GGATCGCTCTCACCAAAACC+AGG | 0.589789 | 4:+49439697 | None:intergenic |
| AGGAAATGCGAAACCCTTTG+TGG | 0.591906 | 4:-49438452 | MsG0480020838.01.T01:CDS |
| TTGTTCAACAATTTCTCACA+AGG | 0.592322 | 4:+49441209 | None:intergenic |
| GAGGCTGAGAGGGCCTTGCG+GGG | 0.592778 | 4:+49437336 | None:intergenic |
| ACCCGCATTATGCTTCCGGA+TGG | 0.593805 | 4:-49439987 | MsG0480020838.01.T01:CDS |
| TTCCATCCGGAAGCATAATG+CGG | 0.604964 | 4:+49439985 | None:intergenic |
| CACAAAATCAGTCATTGACG+GGG | 0.606548 | 4:+49437471 | None:intergenic |
| AACCTGCAAGCCGAGAGGAA+AGG | 0.606711 | 4:+49439889 | None:intergenic |
| GATCATATGGGTTCACCATG+GGG | 0.606822 | 4:+49439004 | None:intergenic |
| GTGGAAGAATCAATTAGGCA+AGG | 0.615184 | 4:-49438472 | MsG0480020838.01.T01:CDS |
| AGTTTCTTATCAGGGAAGCA+TGG | 0.625370 | 4:-49438865 | MsG0480020838.01.T01:CDS |
| ACAGGGAATGGATGACAAAG+TGG | 0.625940 | 4:-49437497 | MsG0480020838.01.T01:intron |
| TCTATGAGGATTTCTGGCAA+AGG | 0.628041 | 4:-49438498 | MsG0480020838.01.T01:CDS |
| GCTTCCGGATGGAAGATACA+TGG | 0.631513 | 4:-49439976 | MsG0480020838.01.T01:CDS |
| TGACAAACCAAGCATGAAGT+GGG | 0.631660 | 4:+49441147 | None:intergenic |
| AGGATCATATGGGTTCACCA+TGG | 0.635002 | 4:+49439002 | None:intergenic |
| CAAGAAGTAGTAGCAAGTAG+TGG | 0.638951 | 4:-49437256 | MsG0480020838.01.T01:CDS |
| TACATGGCATACAAGGAGCA+AGG | 0.639291 | 4:-49439960 | MsG0480020838.01.T01:CDS |
| GTGTAGTAAATATCTGTCTG+TGG | 0.641522 | 4:+49437368 | None:intergenic |
| AAAGAAATGCTGAGGCTGAG+AGG | 0.645314 | 4:+49437325 | None:intergenic |
| CTACTTCTAAAGAAATGCTG+AGG | 0.649194 | 4:+49437317 | None:intergenic |
| GATGATATTGGCCAGAACAA+CGG | 0.649642 | 4:+49437177 | None:intergenic |
| AAATACTTGCTTCTCAAGTG+GGG | 0.651959 | 4:+49440028 | None:intergenic |
| ATCATATGGGTTCACCATGG+GGG | 0.655135 | 4:+49439005 | None:intergenic |
| AAATGCGAAACCCTTTGTGG+AGG | 0.661010 | 4:-49438449 | MsG0480020838.01.T01:CDS |
| TTGTGTGTACTTCTAATCAG+TGG | 0.680829 | 4:+49437225 | None:intergenic |
| AGCATGGTCAGATTGACAGG+TGG | 0.689331 | 4:-49438849 | MsG0480020838.01.T01:CDS |
| CAAACAACCTGCAAGCCGAG+AGG | 0.700337 | 4:+49439884 | None:intergenic |
| ACAAAATCAGTCATTGACGG+GGG | 0.748115 | 4:+49437472 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATCATTTTTTAAATGAAA+TGG | + | Chr4:49441539-49441558 | None:intergenic | 10.0% |
| !!! | AAGTTTTGATTTTTATTTTA+TGG | + | Chr4:49437016-49437035 | None:intergenic | 10.0% |
| !!! | AGTTTTGATTTTTATTTTAT+GGG | + | Chr4:49437015-49437034 | None:intergenic | 10.0% |
| !!! | AAAAGTATATATATGTGAAA+TGG | + | Chr4:49441140-49441159 | None:intergenic | 15.0% |
| !!! | ATATTTTCATATTTGCAATT+TGG | + | Chr4:49440352-49440371 | None:intergenic | 15.0% |
| !!! | ATGAAAATATTAGCTTTTAT+AGG | - | Chr4:49440362-49440381 | MsG0480020838.01.T01:intron | 15.0% |
| !!! | GTAAAATATTTAAAACTCTT+GGG | + | Chr4:49439974-49439993 | None:intergenic | 15.0% |
| !!! | TACTTCATTAAATTTAGTTT+AGG | - | Chr4:49439164-49439183 | MsG0480020838.01.T01:intron | 15.0% |
| !!! | TCTAAAATGAGTTTAAAAAT+TGG | + | Chr4:49440489-49440508 | None:intergenic | 15.0% |
| !!! | TGAAAATATTAGCTTTTATA+GGG | - | Chr4:49440363-49440382 | MsG0480020838.01.T01:intron | 15.0% |
| !!! | TGTAAAATATTTAAAACTCT+TGG | + | Chr4:49439975-49439994 | None:intergenic | 15.0% |
| !! | AGTTAAATCAATAAACAAGA+CGG | - | Chr4:49440878-49440897 | MsG0480020838.01.T01:intron | 20.0% |
| !! | TAATTTATTACTATGAATGC+AGG | - | Chr4:49438181-49438200 | MsG0480020838.01.T01:intron | 20.0% |
| !! | TCTTTCATTGTTAAGAAATT+TGG | - | Chr4:49437281-49437300 | MsG0480020838.01.T01:CDS | 20.0% |
| !! | TTAAGAAATTTGGAAAGATT+GGG | - | Chr4:49437291-49437310 | MsG0480020838.01.T01:CDS | 20.0% |
| !! | TTGTAAAAAAGTAACTATCA+AGG | + | Chr4:49440464-49440483 | None:intergenic | 20.0% |
| !!! | AAATTCTTTTAAGTTCTCAT+AGG | - | Chr4:49440582-49440601 | MsG0480020838.01.T01:intron | 20.0% |
| !!! | ACTTTTAACTTGACAAAATT+TGG | - | Chr4:49439072-49439091 | MsG0480020838.01.T01:intron | 20.0% |
| !!! | ATTTCTTGTATTGTGTTTTT+AGG | - | Chr4:49438372-49438391 | MsG0480020838.01.T01:CDS | 20.0% |
| !!! | CATATAATTTGTGATGATAT+TGG | + | Chr4:49441376-49441395 | None:intergenic | 20.0% |
| !!! | TATGTATGGTTTTAAATTGT+GGG | - | Chr4:49437610-49437629 | MsG0480020838.01.T01:intron | 20.0% |
| !!! | TCTATTTCTCAATTTATTAC+CGG | - | Chr4:49439377-49439396 | MsG0480020838.01.T01:intron | 20.0% |
| !!! | TTGATTTTTATTTTATGGGT+TGG | + | Chr4:49437011-49437030 | None:intergenic | 20.0% |
| !!! | TTTACTTTTTTTTGAAGTTG+TGG | - | Chr4:49437512-49437531 | MsG0480020838.01.T01:intron | 20.0% |
| ! | AAATCTGTGTTTACAAAAGT+TGG | - | Chr4:49439929-49439948 | MsG0480020838.01.T01:CDS | 25.0% |
| ! | AACAACCAAAAAAAGAAACA+TGG | + | Chr4:49437462-49437481 | None:intergenic | 25.0% |
| ! | ACAACCAAAAAAAGAAACAT+GGG | + | Chr4:49437461-49437480 | None:intergenic | 25.0% |
| ! | AGCATAAAACATTGAGAATT+AGG | + | Chr4:49438338-49438357 | None:intergenic | 25.0% |
| ! | ATATTATAGTTAAACCCACT+TGG | - | Chr4:49437833-49437852 | MsG0480020838.01.T01:intron | 25.0% |
| ! | ATCTTGATATTGTCACAAAA+TGG | - | Chr4:49437649-49437668 | MsG0480020838.01.T01:intron | 25.0% |
| ! | CTAACTGTAGAATTCTTAAA+AGG | - | Chr4:49437218-49437237 | MsG0480020838.01.T01:exon | 25.0% |
| ! | GCATAAAACATTGAGAATTA+GGG | + | Chr4:49438337-49438356 | None:intergenic | 25.0% |
| ! | GTTAAGAAATTTGGAAAGAT+TGG | - | Chr4:49437290-49437309 | MsG0480020838.01.T01:CDS | 25.0% |
| ! | TCTTGATATTGTCACAAAAT+GGG | - | Chr4:49437650-49437669 | MsG0480020838.01.T01:intron | 25.0% |
| ! | TTTCTTGACTACAAATAATC+TGG | - | Chr4:49440804-49440823 | MsG0480020838.01.T01:intron | 25.0% |
| !! | AATTTGCATTTCTTGATGAT+GGG | - | Chr4:49437563-49437582 | MsG0480020838.01.T01:intron | 25.0% |
| !! | CAGATATTTACTACACTTTT+TGG | - | Chr4:49441177-49441196 | MsG0480020838.01.T01:CDS | 25.0% |
| !! | CATGATAGTTGTTATTCAAA+AGG | + | Chr4:49439128-49439147 | None:intergenic | 25.0% |
| !! | TAATTCTCAATGTTTTATGC+TGG | - | Chr4:49438337-49438356 | MsG0480020838.01.T01:CDS | 25.0% |
| !! | TAGTTTAGAACTAAGAATGT+AGG | - | Chr4:49437688-49437707 | MsG0480020838.01.T01:intron | 25.0% |
| !! | TCTAATTCAATTTGCTTTCT+GGG | - | Chr4:49440983-49441002 | MsG0480020838.01.T01:intron | 25.0% |
| !! | TTGAATTTGCGTTTGAAATT+AGG | - | Chr4:49438754-49438773 | MsG0480020838.01.T01:intron | 25.0% |
| !!! | CTGCAATATAAATTTTTTGG+AGG | + | Chr4:49438139-49438158 | None:intergenic | 25.0% |
| !!! | GTATGTATGGTTTTAAATTG+TGG | - | Chr4:49437609-49437628 | MsG0480020838.01.T01:intron | 25.0% |
| !!! | TGGCTGCAATATAAATTTTT+TGG | + | Chr4:49438142-49438161 | None:intergenic | 25.0% |
| AAAAATACTTGCTTCTCAAG+TGG | + | Chr4:49438515-49438534 | None:intergenic | 30.0% | |
| AAAATACTTGCTTCTCAAGT+GGG | + | Chr4:49438514-49438533 | None:intergenic | 30.0% | |
| ACAAAAGGAATGTGCTTAAT+TGG | - | Chr4:49440178-49440197 | MsG0480020838.01.T01:intron | 30.0% | |
| AGAATTAGGGTTTCAGAAAA+TGG | + | Chr4:49438324-49438343 | None:intergenic | 30.0% | |
| ATGTACATAGATAGAAATGC+AGG | + | Chr4:49439806-49439825 | None:intergenic | 30.0% | |
| CAATTTGCATTTCTTGATGA+TGG | - | Chr4:49437562-49437581 | MsG0480020838.01.T01:intron | 30.0% | |
| CTTGATATTGTCACAAAATG+GGG | - | Chr4:49437651-49437670 | MsG0480020838.01.T01:intron | 30.0% | |
| GACAAAAAAAGAGATAAGCA+AGG | + | Chr4:49439748-49439767 | None:intergenic | 30.0% | |
| GATGTTGTGTATTAACTTTC+AGG | - | Chr4:49439496-49439515 | MsG0480020838.01.T01:intron | 30.0% | |
| GGAATAGGTTAATGTATGTA+TGG | - | Chr4:49437596-49437615 | MsG0480020838.01.T01:intron | 30.0% | |
| TAAGAAGAGAGAAATATGAC+AGG | + | Chr4:49440512-49440531 | None:intergenic | 30.0% | |
| TAGTCTGATATGACAACAAT+TGG | - | Chr4:49441493-49441512 | MsG0480020838.01.T01:five_prime_UTR | 30.0% | |
| TATTAGGAATAGGTCAATGT+AGG | - | Chr4:49438013-49438032 | MsG0480020838.01.T01:intron | 30.0% | |
| TGCAGAAACGAAAATACAAA+AGG | - | Chr4:49440163-49440182 | MsG0480020838.01.T01:intron | 30.0% | |
| TGGATGCTGATAAGAATTTA+TGG | - | Chr4:49439855-49439874 | MsG0480020838.01.T01:intron | 30.0% | |
| TTAGTCAACATGTCCATATA+TGG | - | Chr4:49439770-49439789 | MsG0480020838.01.T01:intron | 30.0% | |
| TTGTCATCAAAGGATCATAT+GGG | + | Chr4:49439549-49439568 | None:intergenic | 30.0% | |
| TTGTTCAACAATTTCTCACA+AGG | + | Chr4:49437332-49437351 | None:intergenic | 30.0% | |
| TTGTTGAGACATTATGAGTA+GGG | - | Chr4:49438278-49438297 | MsG0480020838.01.T01:intron | 30.0% | |
| TTTAACCGTCCAATCTTAAT+AGG | + | Chr4:49440691-49440710 | None:intergenic | 30.0% | |
| TTTACCAAGCTTAAATCAGA+CGG | - | Chr4:49440750-49440769 | MsG0480020838.01.T01:intron | 30.0% | |
| TTTGTCATCAAAGGATCATA+TGG | + | Chr4:49439550-49439569 | None:intergenic | 30.0% | |
| ! | ACTTGTTTAGAGTGAGTTAA+CGG | - | Chr4:49439224-49439243 | MsG0480020838.01.T01:intron | 30.0% |
| ! | CTCTAATTCAATTTGCTTTC+TGG | - | Chr4:49440982-49441001 | MsG0480020838.01.T01:intron | 30.0% |
| !! | ATGAAGCACTGAAATATACA+CGG | + | Chr4:49439437-49439456 | None:intergenic | 30.0% |
| !! | ATGGGTTTTTGTTTAGGAAT+AGG | - | Chr4:49437581-49437600 | MsG0480020838.01.T01:intron | 30.0% |
| !!! | ATCACCCATGTTTCTTTTTT+TGG | - | Chr4:49437454-49437473 | MsG0480020838.01.T01:CDS | 30.0% |
| !!! | TCTTGTATTGTGTTTTTAGG+TGG | - | Chr4:49438375-49438394 | MsG0480020838.01.T01:CDS | 30.0% |
| !!! | TGAATGCAGGTTTTAAATTG+AGG | - | Chr4:49438194-49438213 | MsG0480020838.01.T01:intron | 30.0% |
| !!! | TTGATGATGGGTTTTTGTTT+AGG | - | Chr4:49437575-49437594 | MsG0480020838.01.T01:intron | 30.0% |
| AAATACTTGCTTCTCAAGTG+GGG | + | Chr4:49438513-49438532 | None:intergenic | 35.0% | |
| AATACAATCCCTCAAAACCA+GGG | + | Chr4:49437997-49438016 | None:intergenic | 35.0% | |
| AATACCTGGTTGACATGATT+TGG | - | Chr4:49438439-49438458 | MsG0480020838.01.T01:CDS | 35.0% | |
| AATTACAGAACCCAACTCAA+TGG | - | Chr4:49439883-49439902 | MsG0480020838.01.T01:intron | 35.0% | |
| AATTAGCTGAACCATTGAGT+TGG | + | Chr4:49439897-49439916 | None:intergenic | 35.0% | |
| ACAGTCCTATTAAGATTGGA+CGG | - | Chr4:49440683-49440702 | MsG0480020838.01.T01:intron | 35.0% | |
| ACATAGATAGAAATGCAGGA+TGG | + | Chr4:49439802-49439821 | None:intergenic | 35.0% | |
| AGGATGGTATAAGCCATATA+TGG | + | Chr4:49439786-49439805 | None:intergenic | 35.0% | |
| AGTTCAATAGCCCAAAAACA+GGG | + | Chr4:49441474-49441493 | None:intergenic | 35.0% | |
| ATAGTTAAACCCACTTGGAT+TGG | - | Chr4:49437838-49437857 | MsG0480020838.01.T01:intron | 35.0% | |
| ATCAGCGAAGTTTCTTATCA+GGG | - | Chr4:49439665-49439684 | MsG0480020838.01.T01:CDS | 35.0% | |
| ATCAGTGAATCTTTAACACC+AGG | + | Chr4:49438784-49438803 | None:intergenic | 35.0% | |
| ATCCAATCTATGAGGATTTC+TGG | - | Chr4:49440034-49440053 | MsG0480020838.01.T01:CDS | 35.0% | |
| ATGTGAAATGGCCTTCATAT+GGG | + | Chr4:49441128-49441147 | None:intergenic | 35.0% | |
| ATTAGCTGAACCATTGAGTT+GGG | + | Chr4:49439896-49439915 | None:intergenic | 35.0% | |
| ATTCATAAACCCCCCAAAAA+AGG | + | Chr4:49437769-49437788 | None:intergenic | 35.0% | |
| ATTGCAGTACAATTGTTGAC+AGG | - | Chr4:49441023-49441042 | MsG0480020838.01.T01:intron | 35.0% | |
| CAGATCACTTATATGCTGTT+TGG | + | Chr4:49439473-49439492 | None:intergenic | 35.0% | |
| CTGCAAATTAGAGCAAAATG+TGG | - | Chr4:49438071-49438090 | MsG0480020838.01.T01:intron | 35.0% | |
| GAGCAAAATGTGGATAAATG+AGG | - | Chr4:49438081-49438100 | MsG0480020838.01.T01:intron | 35.0% | |
| GTCTTTATCTCTTGGAAAGA+GGG | - | Chr4:49439714-49439733 | MsG0480020838.01.T01:CDS | 35.0% | |
| GTGTAAGAGAGTTCATGATT+GGG | - | Chr4:49437186-49437205 | MsG0480020838.01.T01:three_prime_UTR | 35.0% | |
| GTGTAGTAAATATCTGTCTG+TGG | + | Chr4:49441173-49441192 | None:intergenic | 35.0% | |
| GTTATGAAAATGCATGCAGA+AGG | + | Chr4:49440292-49440311 | None:intergenic | 35.0% | |
| GTTGTTGAGACATTATGAGT+AGG | - | Chr4:49438277-49438296 | MsG0480020838.01.T01:intron | 35.0% | |
| GTTTCTTTACTTGCTTTCTC+AGG | - | Chr4:49437422-49437441 | MsG0480020838.01.T01:CDS | 35.0% | |
| TAATACAATCCCTCAAAACC+AGG | + | Chr4:49437998-49438017 | None:intergenic | 35.0% | |
| TAGAAGAAACCAAGAAGTCT+AGG | + | Chr4:49439646-49439665 | None:intergenic | 35.0% | |
| TAGTTCAATAGCCCAAAAAC+AGG | + | Chr4:49441475-49441494 | None:intergenic | 35.0% | |
| TATCAGCATCCATCTAACTA+GGG | + | Chr4:49439847-49439866 | None:intergenic | 35.0% | |
| TATCAGCGAAGTTTCTTATC+AGG | - | Chr4:49439664-49439683 | MsG0480020838.01.T01:CDS | 35.0% | |
| TATGTGAAATGGCCTTCATA+TGG | + | Chr4:49441129-49441148 | None:intergenic | 35.0% | |
| TCAACAATGCCTCAAACTAA+GGG | + | Chr4:49438723-49438742 | None:intergenic | 35.0% | |
| TGAGGGATTGTATTAGGAAT+AGG | - | Chr4:49438003-49438022 | MsG0480020838.01.T01:intron | 35.0% | |
| TGCACAAAATCAGTCATTGA+CGG | + | Chr4:49441072-49441091 | None:intergenic | 35.0% | |
| TGTAAGAGAGTTCATGATTG+GGG | - | Chr4:49437187-49437206 | MsG0480020838.01.T01:three_prime_UTR | 35.0% | |
| TGTCTTTATCTCTTGGAAAG+AGG | - | Chr4:49439713-49439732 | MsG0480020838.01.T01:CDS | 35.0% | |
| TGTGTAAGAGAGTTCATGAT+TGG | - | Chr4:49437185-49437204 | MsG0480020838.01.T01:three_prime_UTR | 35.0% | |
| TTAATACCTGCAAGTCTATC+AGG | + | Chr4:49439000-49439019 | None:intergenic | 35.0% | |
| TTATCAGCATCCATCTAACT+AGG | + | Chr4:49439848-49439867 | None:intergenic | 35.0% | |
| TTCAACAATGCCTCAAACTA+AGG | + | Chr4:49438724-49438743 | None:intergenic | 35.0% | |
| TTGATTACTTATGATCTGCC+TGG | - | Chr4:49438823-49438842 | MsG0480020838.01.T01:intron | 35.0% | |
| TTGCAGTACAATTGTTGACA+GGG | - | Chr4:49441024-49441043 | MsG0480020838.01.T01:intron | 35.0% | |
| TTGTGTCACATCAATAGAAC+AGG | - | Chr4:49439278-49439297 | MsG0480020838.01.T01:intron | 35.0% | |
| TTGTGTGTACTTCTAATCAG+TGG | + | Chr4:49441316-49441335 | None:intergenic | 35.0% | |
| ! | AAAAGAATTTTACACCGCTG+AGG | + | Chr4:49440572-49440591 | None:intergenic | 35.0% |
| ! | AAAGAATTTTACACCGCTGA+GGG | + | Chr4:49440571-49440590 | None:intergenic | 35.0% |
| ! | ATTTTCGTTTCTGCAACTTG+AGG | + | Chr4:49440158-49440177 | None:intergenic | 35.0% |
| ! | CGTTTGAAATTAGGAATTCC+TGG | - | Chr4:49438763-49438782 | MsG0480020838.01.T01:intron | 35.0% |
| ! | CTACTTCTAAAGAAATGCTG+AGG | + | Chr4:49441224-49441243 | None:intergenic | 35.0% |
| ! | GAATGTGCTTAATTGGCTTA+AGG | - | Chr4:49440185-49440204 | MsG0480020838.01.T01:intron | 35.0% |
| ! | GTGGCATTGAAGTTAAACAT+GGG | + | Chr4:49437740-49437759 | None:intergenic | 35.0% |
| ! | TGGTGTTAAAGATTCACTGA+TGG | - | Chr4:49438783-49438802 | MsG0480020838.01.T01:intron | 35.0% |
| ! | TGTGGCATTGAAGTTAAACA+TGG | + | Chr4:49437741-49437760 | None:intergenic | 35.0% |
| ! | TTTACAAAAGTTGGTTCCGA+GGG | - | Chr4:49439938-49439957 | MsG0480020838.01.T01:CDS | 35.0% |
| !! | ATTTGTTTTTCCCGTTGTTC+TGG | - | Chr4:49441350-49441369 | MsG0480020838.01.T01:CDS | 35.0% |
| !!! | ATGCCACATGTTTCCTTTTT+TGG | - | Chr4:49437753-49437772 | MsG0480020838.01.T01:intron | 35.0% |
| !!! | GTTGACAAGTTTTGGATCAT+TGG | - | Chr4:49438928-49438947 | MsG0480020838.01.T01:CDS | 35.0% |
| !!! | TGCCACATGTTTCCTTTTTT+GGG | - | Chr4:49437754-49437773 | MsG0480020838.01.T01:intron | 35.0% |
| !!! | TGGTTTTGAGGGATTGTATT+AGG | - | Chr4:49437997-49438016 | MsG0480020838.01.T01:intron | 35.0% |
| AAATTGTAGTTGTGATGCCG+AGG | - | Chr4:49438107-49438126 | MsG0480020838.01.T01:intron | 40.0% | |
| ACAAAATCAGTCATTGACGG+GGG | + | Chr4:49441069-49441088 | None:intergenic | 40.0% | |
| ACAGTCTACAACTGCAATTG+TGG | + | Chr4:49438162-49438181 | None:intergenic | 40.0% | |
| AGTTTCTTATCAGGGAAGCA+TGG | - | Chr4:49439673-49439692 | MsG0480020838.01.T01:CDS | 40.0% | |
| ATAAAGACCCACTTCATGCT+TGG | - | Chr4:49437384-49437403 | MsG0480020838.01.T01:CDS | 40.0% | |
| ATCAACCACTAAAGTCAGAC+AGG | + | Chr4:49438231-49438250 | None:intergenic | 40.0% | |
| ATGACAAACCAAGCATGAAG+TGG | + | Chr4:49437395-49437414 | None:intergenic | 40.0% | |
| ATGATATTGGCCAGAACAAC+GGG | + | Chr4:49441363-49441382 | None:intergenic | 40.0% | |
| CAAGAAGTAGTAGCAAGTAG+TGG | - | Chr4:49441282-49441301 | MsG0480020838.01.T01:CDS | 40.0% | |
| CAATCTTAATAGGACTGTCC+AGG | + | Chr4:49440681-49440700 | None:intergenic | 40.0% | |
| CACAAAATCAGTCATTGACG+GGG | + | Chr4:49441070-49441089 | None:intergenic | 40.0% | |
| CCACAATGTGAATGCAATTG+AGG | + | Chr4:49438258-49438277 | None:intergenic | 40.0% | |
| CCTCAATTGCATTCACATTG+TGG | - | Chr4:49438255-49438274 | MsG0480020838.01.T01:intron | 40.0% | |
| CGGCATCACAACTACAATTT+GGG | + | Chr4:49438107-49438126 | None:intergenic | 40.0% | |
| CTCACTTGCCATATGTGTAT+TGG | + | Chr4:49440252-49440271 | None:intergenic | 40.0% | |
| CTCATACTTTCCTTTCCTCT+CGG | - | Chr4:49438639-49438658 | MsG0480020838.01.T01:intron | 40.0% | |
| CTCTCTTCGTTTGTCATCAA+AGG | + | Chr4:49439559-49439578 | None:intergenic | 40.0% | |
| CTGGACAGTCCTATTAAGAT+TGG | - | Chr4:49440679-49440698 | MsG0480020838.01.T01:intron | 40.0% | |
| GACGATTCCAGATTTCGTTT+GGG | + | Chr4:49438871-49438890 | None:intergenic | 40.0% | |
| GATGATATTGGCCAGAACAA+CGG | + | Chr4:49441364-49441383 | None:intergenic | 40.0% | |
| GATGGAAGATCCAATCTATG+AGG | - | Chr4:49440026-49440045 | MsG0480020838.01.T01:CDS | 40.0% | |
| GATTATCCCCATGCCAAATT+CGG | - | Chr4:49437916-49437935 | MsG0480020838.01.T01:intron | 40.0% | |
| GATTCACTGATGGAAGAGTT+TGG | - | Chr4:49438793-49438812 | MsG0480020838.01.T01:intron | 40.0% | |
| GCACAAAATCAGTCATTGAC+GGG | + | Chr4:49441071-49441090 | None:intergenic | 40.0% | |
| GGGATGTGGAAGAATCAATT+AGG | - | Chr4:49440061-49440080 | MsG0480020838.01.T01:CDS | 40.0% | |
| GTACAATTGTTGACAGGGAA+TGG | - | Chr4:49441029-49441048 | MsG0480020838.01.T01:intron | 40.0% | |
| GTACACAAACTCCCATATGA+AGG | - | Chr4:49441114-49441133 | MsG0480020838.01.T01:intron | 40.0% | |
| GTGGAAGAATCAATTAGGCA+AGG | - | Chr4:49440066-49440085 | MsG0480020838.01.T01:intron | 40.0% | |
| GTTCAATAGCCCAAAAACAG+GGG | + | Chr4:49441473-49441492 | None:intergenic | 40.0% | |
| TAAATCAGACGGTCTGCATT+TGG | - | Chr4:49440761-49440780 | MsG0480020838.01.T01:intron | 40.0% | |
| TACATACCTGATAGACTTGC+AGG | - | Chr4:49438991-49439010 | MsG0480020838.01.T01:CDS | 40.0% | |
| TATCTCTTGGAAAGAGGGTA+AGG | - | Chr4:49439719-49439738 | MsG0480020838.01.T01:CDS | 40.0% | |
| TATGCCATGTATCTTCCATC+CGG | + | Chr4:49438569-49438588 | None:intergenic | 40.0% | |
| TCAACCAAATCATGTCAACC+AGG | + | Chr4:49438446-49438465 | None:intergenic | 40.0% | |
| TCAACCACTAAAGTCAGACA+GGG | + | Chr4:49438230-49438249 | None:intergenic | 40.0% | |
| TCAGTGAGAATAAGTGTGTC+TGG | - | Chr4:49439306-49439325 | MsG0480020838.01.T01:intron | 40.0% | |
| TCAGTGCTTTGTCCTGAAAA+AGG | + | Chr4:49440008-49440027 | None:intergenic | 40.0% | |
| TCGGCATCACAACTACAATT+TGG | + | Chr4:49438108-49438127 | None:intergenic | 40.0% | |
| TCGTGTTAACCCTAGTTAGA+TGG | - | Chr4:49439835-49439854 | MsG0480020838.01.T01:intron | 40.0% | |
| TCTGCAACTTGAGGTCTAAA+AGG | + | Chr4:49440149-49440168 | None:intergenic | 40.0% | |
| TGAAGTGGGTCTTTATCTTC+AGG | + | Chr4:49437380-49437399 | None:intergenic | 40.0% | |
| TGAATTCAATTGACCTTCCC+TGG | - | Chr4:49437977-49437996 | MsG0480020838.01.T01:intron | 40.0% | |
| TGACAAACCAAGCATGAAGT+GGG | + | Chr4:49437394-49437413 | None:intergenic | 40.0% | |
| TGACGATTCCAGATTTCGTT+TGG | + | Chr4:49438872-49438891 | None:intergenic | 40.0% | |
| TGAGACATTATGAGTAGGGT+CGG | - | Chr4:49438282-49438301 | MsG0480020838.01.T01:intron | 40.0% | |
| TGCCAGAAATCCTCATAGAT+TGG | + | Chr4:49440039-49440058 | None:intergenic | 40.0% | |
| TGGAAGATACATGGCATACA+AGG | - | Chr4:49438571-49438590 | MsG0480020838.01.T01:intron | 40.0% | |
| TTCTCGGTCCAATACACATA+TGG | - | Chr4:49440241-49440260 | MsG0480020838.01.T01:intron | 40.0% | |
| ! | ACTGAAACTCAGGAGTATAC+GGG | - | Chr4:49440216-49440235 | MsG0480020838.01.T01:intron | 40.0% |
| ! | ACTTATGATCTGCCTGGTTT+TGG | - | Chr4:49438829-49438848 | MsG0480020838.01.T01:CDS | 40.0% |
| ! | AGAAGCATACAGCTCAATTG+AGG | - | Chr4:49440607-49440626 | MsG0480020838.01.T01:intron | 40.0% |
| ! | ATACAAGGAGCAAGGTGTTT+CGG | - | Chr4:49438586-49438605 | MsG0480020838.01.T01:intron | 40.0% |
| ! | CACTGAAACTCAGGAGTATA+CGG | - | Chr4:49440215-49440234 | MsG0480020838.01.T01:intron | 40.0% |
| ! | CAGATCTCATTGCCTTTTTC+AGG | - | Chr4:49439993-49440012 | MsG0480020838.01.T01:CDS | 40.0% |
| ! | GATGGTAATGAGCGGATTTA+TGG | + | Chr4:49440537-49440556 | None:intergenic | 40.0% |
| ! | GTTTACAAAAGTTGGTTCCG+AGG | - | Chr4:49439937-49439956 | MsG0480020838.01.T01:CDS | 40.0% |
| ! | TGGATCATTGGTTACTCAAG+TGG | - | Chr4:49438940-49438959 | MsG0480020838.01.T01:CDS | 40.0% |
| ! | TTGCTGTTCAAGTTCAACGT+TGG | + | Chr4:49441265-49441284 | None:intergenic | 40.0% |
| ! | TTGTTTCCACCCTTAGTTTG+AGG | - | Chr4:49438711-49438730 | MsG0480020838.01.T01:intron | 40.0% |
| !! | AAGTTCAACGTTGGCTTCTA+GGG | + | Chr4:49441256-49441275 | None:intergenic | 40.0% |
| !! | CTATGAGGATTTCTGGCAAA+GGG | - | Chr4:49440041-49440060 | MsG0480020838.01.T01:CDS | 40.0% |
| !! | GTAGGCATGGTTCTAAATTG+CGG | - | Chr4:49438031-49438050 | MsG0480020838.01.T01:intron | 40.0% |
| !! | TCTATGAGGATTTCTGGCAA+AGG | - | Chr4:49440040-49440059 | MsG0480020838.01.T01:CDS | 40.0% |
| !!! | CACATGTTTCCTTTTTTGGG+GGG | - | Chr4:49437757-49437776 | MsG0480020838.01.T01:intron | 40.0% |
| !!! | CCACATGTTTCCTTTTTTGG+GGG | - | Chr4:49437756-49437775 | MsG0480020838.01.T01:intron | 40.0% |
| !!! | CTCTTGGTGTTGACAAGTTT+TGG | - | Chr4:49438920-49438939 | MsG0480020838.01.T01:CDS | 40.0% |
| !!! | GCCACATGTTTCCTTTTTTG+GGG | - | Chr4:49437755-49437774 | MsG0480020838.01.T01:intron | 40.0% |
| !!! | TCGTTTTTAGCTGATGCTCT+TGG | - | Chr4:49438904-49438923 | MsG0480020838.01.T01:CDS | 40.0% |
| !!! | TTTTCAGGACAAAGCACTGA+TGG | - | Chr4:49440008-49440027 | MsG0480020838.01.T01:CDS | 40.0% |
| !!! | TTTTTTGGAGGTCTTCACCT+CGG | + | Chr4:49438127-49438146 | None:intergenic | 40.0% |
| AAAGAAATGCTGAGGCTGAG+AGG | + | Chr4:49441216-49441235 | None:intergenic | 45.0% | |
| AAAGCAGCTTCCTCCACAAA+GGG | + | Chr4:49440102-49440121 | None:intergenic | 45.0% | |
| AAATGCGAAACCCTTTGTGG+AGG | - | Chr4:49440089-49440108 | MsG0480020838.01.T01:intron | 45.0% | |
| AAGAAATGCTGAGGCTGAGA+GGG | + | Chr4:49441215-49441234 | None:intergenic | 45.0% | |
| AAGTGGAAGCAAGCATGCTT+GGG | - | Chr4:49438957-49438976 | MsG0480020838.01.T01:CDS | 45.0% | |
| ACAATGCCTCAAACTAAGGG+TGG | + | Chr4:49438720-49438739 | None:intergenic | 45.0% | |
| ACAGGGAATGGATGACAAAG+TGG | - | Chr4:49441041-49441060 | MsG0480020838.01.T01:intron | 45.0% | |
| AGGAAATGCGAAACCCTTTG+TGG | - | Chr4:49440086-49440105 | MsG0480020838.01.T01:intron | 45.0% | |
| AGGATCATATGGGTTCACCA+TGG | + | Chr4:49439539-49439558 | None:intergenic | 45.0% | |
| AGGTGGCTGTCTTTATCTCT+TGG | - | Chr4:49439706-49439725 | MsG0480020838.01.T01:CDS | 45.0% | |
| ATCATATGGGTTCACCATGG+GGG | + | Chr4:49439536-49439555 | None:intergenic | 45.0% | |
| ATCTCGATTCTCTGCTGTCA+GGG | - | Chr4:49440630-49440649 | MsG0480020838.01.T01:intron | 45.0% | |
| ATTATGAGTAGGGTCGGTCT+AGG | - | Chr4:49438288-49438307 | MsG0480020838.01.T01:intron | 45.0% | |
| CAACCACTAAAGTCAGACAG+GGG | + | Chr4:49438229-49438248 | None:intergenic | 45.0% | |
| CAGACCGTCTGATTTAAGCT+TGG | + | Chr4:49440757-49440776 | None:intergenic | 45.0% | |
| CCCCCAAAAAAGGAAACATG+TGG | + | Chr4:49437759-49437778 | None:intergenic | 45.0% | |
| CGAAGCTTTCCTAGACTTCT+TGG | - | Chr4:49439634-49439653 | MsG0480020838.01.T01:CDS | 45.0% | |
| GACGAAGAACCTGGAACAAA+TGG | - | Chr4:49439578-49439597 | MsG0480020838.01.T01:CDS | 45.0% | |
| GATCATATGGGTTCACCATG+GGG | + | Chr4:49439537-49439556 | None:intergenic | 45.0% | |
| GGAATAGGTCAATGTAGGCA+TGG | - | Chr4:49438018-49438037 | MsG0480020838.01.T01:intron | 45.0% | |
| GGATCATATGGGTTCACCAT+GGG | + | Chr4:49439538-49439557 | None:intergenic | 45.0% | |
| TACATGGCATACAAGGAGCA+AGG | - | Chr4:49438578-49438597 | MsG0480020838.01.T01:intron | 45.0% | |
| TAGTTGAGCTTCATCTCCGA+TGG | - | Chr4:49441413-49441432 | MsG0480020838.01.T01:five_prime_UTR | 45.0% | |
| TCCTCATCCCAAACGAAATC+TGG | - | Chr4:49438861-49438880 | MsG0480020838.01.T01:CDS | 45.0% | |
| TCTTTCCTATGCTGCTCCAT+CGG | + | Chr4:49441432-49441451 | None:intergenic | 45.0% | |
| TGCTTTGCAGGTCTCGAATT+GGG | - | Chr4:49440116-49440135 | MsG0480020838.01.T01:intron | 45.0% | |
| ! | AATTTTACACCGCTGAGGGA+AGG | + | Chr4:49440567-49440586 | None:intergenic | 45.0% |
| ! | ATTTTACACCGCTGAGGGAA+GGG | + | Chr4:49440566-49440585 | None:intergenic | 45.0% |
| ! | CAGGAGTATACGGGATTTCT+CGG | - | Chr4:49440225-49440244 | MsG0480020838.01.T01:intron | 45.0% |
| ! | CGAGAGGAAAGGAAAGTATG+AGG | + | Chr4:49438641-49438660 | None:intergenic | 45.0% |
| ! | GGCAGTTTTCACTGAAACTC+AGG | - | Chr4:49440206-49440225 | MsG0480020838.01.T01:intron | 45.0% |
| ! | TAGCTAGTCTGCTCAATACC+TGG | - | Chr4:49438425-49438444 | MsG0480020838.01.T01:CDS | 45.0% |
| ! | TCCAGATTTCGTTTGGGATG+AGG | + | Chr4:49438865-49438884 | None:intergenic | 45.0% |
| ! | TTCCATCCGGAAGCATAATG+CGG | + | Chr4:49438556-49438575 | None:intergenic | 45.0% |
| ! | TTTTCGCGTCCATTTGTTCC+AGG | + | Chr4:49439590-49439609 | None:intergenic | 45.0% |
| !! | ACGTTGGCTTCTAGGGTAAT+TGG | + | Chr4:49441249-49441268 | None:intergenic | 45.0% |
| !! | ATGGTTCTAAATTGCGGCTG+TGG | - | Chr4:49438037-49438056 | MsG0480020838.01.T01:intron | 45.0% |
| !! | CAAGTTCAACGTTGGCTTCT+AGG | + | Chr4:49441257-49441276 | None:intergenic | 45.0% |
| !! | TAAACCCACTTGGATTGGTC+CGG | - | Chr4:49437843-49437862 | MsG0480020838.01.T01:intron | 45.0% |
| !!! | ATTGACCTTCCCTGGTTTTG+AGG | - | Chr4:49437985-49438004 | MsG0480020838.01.T01:intron | 45.0% |
| !!! | TTGACCTTCCCTGGTTTTGA+GGG | - | Chr4:49437986-49438005 | MsG0480020838.01.T01:intron | 45.0% |
| !!! | TATTTTTTTTTTTTAAGTTA+TGG | - | Chr4:49437799-49437818 | MsG0480020838.01.T01:intron | 5.0% |
| ACGAAGAGAGACGAAGAACC+TGG | - | Chr4:49439569-49439588 | MsG0480020838.01.T01:CDS | 50.0% | |
| AGCATGGTCAGATTGACAGG+TGG | - | Chr4:49439689-49439708 | MsG0480020838.01.T01:CDS | 50.0% | |
| AGGTCAAAAGCCAACACCAC+CGG | + | Chr4:49437865-49437884 | None:intergenic | 50.0% | |
| AGTTTGTGTACTGCAGCTCC+AGG | + | Chr4:49441105-49441124 | None:intergenic | 50.0% | |
| ATAATGCGGGTAGCACTAGC+AGG | + | Chr4:49438542-49438561 | None:intergenic | 50.0% | |
| ATCCCCATGCCAAATTCGGT+GGG | - | Chr4:49437920-49437939 | MsG0480020838.01.T01:intron | 50.0% | |
| CAAAGCAGCTTCCTCCACAA+AGG | + | Chr4:49440103-49440122 | None:intergenic | 50.0% | |
| CAAGTGGAAGCAAGCATGCT+TGG | - | Chr4:49438956-49438975 | MsG0480020838.01.T01:CDS | 50.0% | |
| CAATAGCCCAAAAACAGGGG+CGG | + | Chr4:49441470-49441489 | None:intergenic | 50.0% | |
| CAATCCCTCAAAACCAGGGA+AGG | + | Chr4:49437993-49438012 | None:intergenic | 50.0% | |
| CCAAACTAGCCCACCGAATT+TGG | + | Chr4:49437932-49437951 | None:intergenic | 50.0% | |
| CTGCTTTGCAGGTCTCGAAT+TGG | - | Chr4:49440115-49440134 | MsG0480020838.01.T01:intron | 50.0% | |
| CTTGGAGTGTGCTCTTCTCA+AGG | - | Chr4:49437883-49437902 | MsG0480020838.01.T01:intron | 50.0% | |
| GATCTCGATTCTCTGCTGTC+AGG | - | Chr4:49440629-49440648 | MsG0480020838.01.T01:intron | 50.0% | |
| GCTTCCGGATGGAAGATACA+TGG | - | Chr4:49438562-49438581 | MsG0480020838.01.T01:intron | 50.0% | |
| GCTTTGCAGGTCTCGAATTG+GGG | - | Chr4:49440117-49440136 | MsG0480020838.01.T01:intron | 50.0% | |
| GTGTGCTCTTCTCAAGGTCT+CGG | - | Chr4:49437889-49437908 | MsG0480020838.01.T01:intron | 50.0% | |
| TAGCCCACCGAATTTGGCAT+GGG | + | Chr4:49437926-49437945 | None:intergenic | 50.0% | |
| TATCCCCATGCCAAATTCGG+TGG | - | Chr4:49437919-49437938 | MsG0480020838.01.T01:intron | 50.0% | |
| TCATGTGCGTGAGCGATAGA+GGG | + | Chr4:49440832-49440851 | None:intergenic | 50.0% | |
| TGACACTGACACGTAGAGAC+CGG | + | Chr4:49439399-49439418 | None:intergenic | 50.0% | |
| TGCTACCCGCATTATGCTTC+CGG | - | Chr4:49438547-49438566 | MsG0480020838.01.T01:intron | 50.0% | |
| TGTCAGTGTCATGTCGTGTC+TGG | - | Chr4:49439408-49439427 | MsG0480020838.01.T01:intron | 50.0% | |
| TGTGCTCTTCTCAAGGTCTC+GGG | - | Chr4:49437890-49437909 | MsG0480020838.01.T01:intron | 50.0% | |
| TTCATGTGCGTGAGCGATAG+AGG | + | Chr4:49440833-49440852 | None:intergenic | 50.0% | |
| TTTGTGCATCGCGTACTACC+TGG | - | Chr4:49441084-49441103 | MsG0480020838.01.T01:intron | 50.0% | |
| ! | AAAGTTGGTTCCGAGGGCAT+AGG | - | Chr4:49439944-49439963 | MsG0480020838.01.T01:CDS | 50.0% |
| ! | AGTGTTTCCGCCCCTGTTTT+TGG | - | Chr4:49441460-49441479 | MsG0480020838.01.T01:five_prime_UTR | 50.0% |
| ! | CTTGAGAAGAGCACACTCCA+AGG | + | Chr4:49437885-49437904 | None:intergenic | 50.0% |
| ! | GGAAGCATGGTCAGATTGAC+AGG | - | Chr4:49439686-49439705 | MsG0480020838.01.T01:CDS | 50.0% |
| ! | GGGAAGGAGATGGTAATGAG+CGG | + | Chr4:49440545-49440564 | None:intergenic | 50.0% |
| ! | TCCATCCGGAAGCATAATGC+GGG | + | Chr4:49438555-49438574 | None:intergenic | 50.0% |
| ! | TTTTACACCGCTGAGGGAAG+GGG | + | Chr4:49440565-49440584 | None:intergenic | 50.0% |
| !! | CCAAATTCGGTGGGCTAGTT+TGG | - | Chr4:49437929-49437948 | MsG0480020838.01.T01:intron | 50.0% |
| !! | GGATTTCTGGCAAAGGGATG+TGG | - | Chr4:49440047-49440066 | MsG0480020838.01.T01:CDS | 50.0% |
| !! | GTGTTTCCGCCCCTGTTTTT+GGG | - | Chr4:49441461-49441480 | MsG0480020838.01.T01:five_prime_UTR | 50.0% |
| !!! | ACACTTTTTGGAACCCCGCA+AGG | - | Chr4:49441189-49441208 | MsG0480020838.01.T01:CDS | 50.0% |
| !!! | GTGGTGTTGGCTTTTGACCT+TGG | - | Chr4:49437865-49437884 | MsG0480020838.01.T01:intron | 50.0% |
| AACCTGCAAGCCGAGAGGAA+AGG | + | Chr4:49438652-49438671 | None:intergenic | 55.0% | |
| ACCACCGGACCAATCCAAGT+GGG | + | Chr4:49437850-49437869 | None:intergenic | 55.0% | |
| ACCCGCATTATGCTTCCGGA+TGG | - | Chr4:49438551-49438570 | MsG0480020838.01.T01:intron | 55.0% | |
| AGCCCACCGAATTTGGCATG+GGG | + | Chr4:49437925-49437944 | None:intergenic | 55.0% | |
| CAAACAACCTGCAAGCCGAG+AGG | + | Chr4:49438657-49438676 | None:intergenic | 55.0% | |
| CACTAAAGTCAGACAGGGGC+AGG | + | Chr4:49438225-49438244 | None:intergenic | 55.0% | |
| CATCTCCGATGGAGCAGCAT+AGG | - | Chr4:49441424-49441443 | MsG0480020838.01.T01:five_prime_UTR | 55.0% | |
| CTAGCCCACCGAATTTGGCA+TGG | + | Chr4:49437927-49437946 | None:intergenic | 55.0% | |
| CTGCCCCTGTCTGACTTTAG+TGG | - | Chr4:49438223-49438242 | MsG0480020838.01.T01:intron | 55.0% | |
| CTTGGGATAGCCTATGCCCT+CGG | + | Chr4:49439957-49439976 | None:intergenic | 55.0% | |
| GGATCGCTCTCACCAAAACC+AGG | + | Chr4:49438844-49438863 | None:intergenic | 55.0% | |
| GTTCACCATGGGGGCAAACA+TGG | + | Chr4:49439527-49439546 | None:intergenic | 55.0% | |
| ! | GCTTGCTAACGGCATGACCA+GGG | + | Chr4:49440659-49440678 | None:intergenic | 55.0% |
| ! | TGTGGAGGAAGCTGCTTTGC+AGG | - | Chr4:49440104-49440123 | MsG0480020838.01.T01:intron | 55.0% |
| ! | TTCCTTTCCTCTCGGCTTGC+AGG | - | Chr4:49438647-49438666 | MsG0480020838.01.T01:intron | 55.0% |
| !! | GGACTGTCCAGGCTTGCTAA+CGG | + | Chr4:49440670-49440689 | None:intergenic | 55.0% |
| !! | TTGGATTGGTCCGGTGGTGT+TGG | - | Chr4:49437852-49437871 | MsG0480020838.01.T01:intron | 55.0% |
| CACCACCGGACCAATCCAAG+TGG | + | Chr4:49437851-49437870 | None:intergenic | 60.0% | |
| CTCTGCTGTCAGGGAATCCC+TGG | - | Chr4:49440639-49440658 | MsG0480020838.01.T01:intron | 60.0% | |
| CTGAGGGAAGGGGAAGGAGA+TGG | + | Chr4:49440555-49440574 | None:intergenic | 60.0% | |
| GGTCATGCCGTTAGCAAGCC+TGG | - | Chr4:49440660-49440679 | MsG0480020838.01.T01:intron | 60.0% | |
| TCTCCTTCCCCTTCCCTCAG+CGG | - | Chr4:49440555-49440574 | MsG0480020838.01.T01:intron | 60.0% | |
| TGCTGCCATGTTTGCCCCCA+TGG | - | Chr4:49439519-49439538 | MsG0480020838.01.T01:intron | 60.0% | |
| !! | ACCCACTTGGATTGGTCCGG+TGG | - | Chr4:49437846-49437865 | MsG0480020838.01.T01:intron | 60.0% |
| !! | GGCTTGCTAACGGCATGACC+AGG | + | Chr4:49440660-49440679 | None:intergenic | 60.0% |
| ACACCGCTGAGGGAAGGGGA+AGG | + | Chr4:49440561-49440580 | None:intergenic | 65.0% | |
| CTGAGGCTGAGAGGGCCTTG+CGG | + | Chr4:49441207-49441226 | None:intergenic | 65.0% | |
| TGAGGCTGAGAGGGCCTTGC+GGG | + | Chr4:49441206-49441225 | None:intergenic | 65.0% | |
| GAGGCTGAGAGGGCCTTGCG+GGG | + | Chr4:49441205-49441224 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 49436976 | 49441584 | 49436976 | ID=MsG0480020838.01;Name=MsG0480020838.01 |
| Chr4 | mRNA | 49436976 | 49441584 | 49436976 | ID=MsG0480020838.01.T01;Parent=MsG0480020838.01;Name=MsG0480020838.01.T01;_AED=0.49;_eAED=0.49;_QI=176|1|1|1|1|1|6|261|489 |
| Chr4 | exon | 49436976 | 49437515 | 49436976 | ID=MsG0480020838.01.T01:exon:793;Parent=MsG0480020838.01.T01 |
| Chr4 | exon | 49438294 | 49438545 | 49438294 | ID=MsG0480020838.01.T01:exon:792;Parent=MsG0480020838.01.T01 |
| Chr4 | exon | 49438825 | 49439042 | 49438825 | ID=MsG0480020838.01.T01:exon:791;Parent=MsG0480020838.01.T01 |
| Chr4 | exon | 49439548 | 49439784 | 49439548 | ID=MsG0480020838.01.T01:exon:790;Parent=MsG0480020838.01.T01 |
| Chr4 | exon | 49439892 | 49440083 | 49439892 | ID=MsG0480020838.01.T01:exon:789;Parent=MsG0480020838.01.T01 |
| Chr4 | exon | 49441117 | 49441584 | 49441117 | ID=MsG0480020838.01.T01:exon:788;Parent=MsG0480020838.01.T01 |
| Chr4 | five_prime_UTR | 49441409 | 49441584 | 49441409 | ID=MsG0480020838.01.T01:five_prime_utr;Parent=MsG0480020838.01.T01 |
| Chr4 | CDS | 49441117 | 49441408 | 49441117 | ID=MsG0480020838.01.T01:cds;Parent=MsG0480020838.01.T01 |
| Chr4 | CDS | 49439892 | 49440083 | 49439892 | ID=MsG0480020838.01.T01:cds;Parent=MsG0480020838.01.T01 |
| Chr4 | CDS | 49439548 | 49439784 | 49439548 | ID=MsG0480020838.01.T01:cds;Parent=MsG0480020838.01.T01 |
| Chr4 | CDS | 49438825 | 49439042 | 49438825 | ID=MsG0480020838.01.T01:cds;Parent=MsG0480020838.01.T01 |
| Chr4 | CDS | 49438294 | 49438545 | 49438294 | ID=MsG0480020838.01.T01:cds;Parent=MsG0480020838.01.T01 |
| Chr4 | CDS | 49437237 | 49437515 | 49437237 | ID=MsG0480020838.01.T01:cds;Parent=MsG0480020838.01.T01 |
| Chr4 | three_prime_UTR | 49436976 | 49437236 | 49436976 | ID=MsG0480020838.01.T01:three_prime_utr;Parent=MsG0480020838.01.T01 |
| Gene Sequence |
| Protein sequence |
