Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880043303.01.T01 | XP_013443654.1 | 70.807 | 161 | 3 | 2 | 1 | 159 | 74 | 192 | 1.52E-67 | 217 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880043303.01.T01 | Q9LEX0 | 45.205 | 146 | 38 | 1 | 14 | 159 | 87 | 190 | 2.94E-38 | 135 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880043303.01.T01 | A0A072TJF7 | 70.807 | 161 | 3 | 2 | 1 | 159 | 74 | 192 | 7.24e-68 | 217 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047869.01 | MsG0880043303.01 | 0.822280 | 2.577559e-53 | 2.147792e-50 |
| MsG0080048656.01 | MsG0880043303.01 | 0.801261 | 9.787085e-49 | 4.653189e-46 |
| MsG0080048764.01 | MsG0880043303.01 | 0.807156 | 5.799667e-50 | 3.206722e-47 |
| MsG0080048804.01 | MsG0880043303.01 | 0.811890 | 5.583393e-51 | 3.497524e-48 |
| MsG0080048964.01 | MsG0880043303.01 | 0.816566 | 5.176365e-52 | 3.680729e-49 |
| MsG0180000152.01 | MsG0880043303.01 | 0.812111 | 4.996600e-51 | 3.148941e-48 |
| MsG0180000267.01 | MsG0880043303.01 | 0.807467 | 4.983645e-50 | 2.778035e-47 |
| MsG0180000546.01 | MsG0880043303.01 | 0.807715 | 4.415202e-50 | 2.476963e-47 |
| MsG0180000550.01 | MsG0880043303.01 | 0.838234 | 3.246078e-57 | 4.320280e-54 |
| MsG0180000669.01 | MsG0880043303.01 | 0.830798 | 2.397256e-55 | 2.552613e-52 |
| MsG0180000673.01 | MsG0880043303.01 | 0.811585 | 6.505711e-51 | 4.042610e-48 |
| MsG0180000679.01 | MsG0880043303.01 | 0.863066 | 3.245588e-64 | 9.713153e-61 |
| MsG0180001043.01 | MsG0880043303.01 | 0.815376 | 9.544779e-52 | 6.569323e-49 |
| MsG0180001063.01 | MsG0880043303.01 | 0.822313 | 2.532446e-53 | 2.112184e-50 |
| MsG0180001141.01 | MsG0880043303.01 | 0.802762 | 4.810305e-49 | 2.375920e-46 |
| MsG0180001663.01 | MsG0880043303.01 | 0.809869 | 1.528767e-50 | 9.078923e-48 |
| MsG0180001795.01 | MsG0880043303.01 | 0.860145 | 2.532554e-63 | 6.853929e-60 |
| MsG0180001921.01 | MsG0880043303.01 | 0.836982 | 6.799520e-57 | 8.710278e-54 |
| MsG0180002482.01 | MsG0880043303.01 | 0.843212 | 1.610364e-58 | 2.501445e-55 |
| MsG0180003669.01 | MsG0880043303.01 | 0.809805 | 1.577882e-50 | 9.355083e-48 |
| MsG0180003952.01 | MsG0880043303.01 | 0.855859 | 4.755026e-62 | 1.113264e-58 |
| MsG0180004325.01 | MsG0880043303.01 | 0.820702 | 5.963934e-53 | 4.753590e-50 |
| MsG0180004886.01 | MsG0880043303.01 | -0.800853 | 1.185915e-48 | 5.580622e-46 |
| MsG0180005193.01 | MsG0880043303.01 | 0.826746 | 2.290136e-54 | 2.166643e-51 |
| MsG0180005350.01 | MsG0880043303.01 | 0.810570 | 1.079342e-50 | 6.528939e-48 |
| MsG0180005371.01 | MsG0880043303.01 | 0.814366 | 1.597971e-51 | 1.070146e-48 |
| MsG0180005842.01 | MsG0880043303.01 | 0.821336 | 4.263045e-53 | 3.458412e-50 |
| MsG0180005872.01 | MsG0880043303.01 | 0.834280 | 3.282901e-56 | 3.877714e-53 |
| MsG0180006016.01 | MsG0880043303.01 | 0.813249 | 2.816713e-51 | 1.829855e-48 |
| MsG0180006138.01 | MsG0880043303.01 | 0.804340 | 2.264525e-49 | 1.164649e-46 |
| MsG0180006220.01 | MsG0880043303.01 | 0.825493 | 4.548485e-54 | 4.152290e-51 |
| MsG0280006356.01 | MsG0880043303.01 | 0.824827 | 6.536358e-54 | 5.855258e-51 |
| MsG0280006375.01 | MsG0880043303.01 | 0.825716 | 4.027441e-54 | 3.700193e-51 |
| MsG0780040280.01 | MsG0880043303.01 | 0.810523 | 1.105205e-50 | 6.676851e-48 |
| MsG0780040442.01 | MsG0880043303.01 | 0.859511 | 3.931872e-63 | 1.040983e-59 |
| MsG0780040596.01 | MsG0880043303.01 | 0.835117 | 2.021774e-56 | 2.448477e-53 |
| MsG0780040726.01 | MsG0880043303.01 | 0.801390 | 9.211747e-49 | 4.393778e-46 |
| MsG0780040749.01 | MsG0880043303.01 | 0.800941 | 1.137751e-48 | 5.365926e-46 |
| MsG0780040858.01 | MsG0880043303.01 | 0.855119 | 7.809874e-62 | 1.783870e-58 |
| MsG0780040861.01 | MsG0880043303.01 | 0.812633 | 3.843376e-51 | 2.456319e-48 |
| MsG0780041399.01 | MsG0880043303.01 | 0.815147 | 1.073065e-51 | 7.338983e-49 |
| MsG0780041402.01 | MsG0880043303.01 | 0.811732 | 6.041651e-51 | 3.769071e-48 |
| MsG0780041456.01 | MsG0880043303.01 | 0.849032 | 4.193191e-60 | 7.845910e-57 |
| MsG0880042294.01 | MsG0880043303.01 | 0.845421 | 4.104873e-59 | 6.836887e-56 |
| MsG0880042314.01 | MsG0880043303.01 | 0.814749 | 1.314575e-51 | 8.894955e-49 |
| MsG0880042611.01 | MsG0880043303.01 | 0.834886 | 2.312917e-56 | 2.781770e-53 |
| MsG0880042966.01 | MsG0880043303.01 | 0.803748 | 3.005869e-49 | 1.522611e-46 |
| MsG0880043002.01 | MsG0880043303.01 | 0.831344 | 1.760267e-55 | 1.904895e-52 |
| MsG0880043003.01 | MsG0880043303.01 | 0.836317 | 1.004497e-56 | 1.261498e-53 |
| MsG0880043144.01 | MsG0880043303.01 | 0.802561 | 5.291367e-49 | 2.600043e-46 |
| MsG0880043303.01 | MsG0880043465.01 | 0.805638 | 1.212030e-49 | 6.445411e-47 |
| MsG0880043303.01 | MsG0880044415.01 | 0.803276 | 3.765378e-49 | 1.884321e-46 |
| MsG0880043303.01 | MsG0880044455.01 | -0.802577 | 5.251022e-49 | 2.581295e-46 |
| MsG0880043303.01 | MsG0880045133.01 | 0.805045 | 1.613236e-49 | 8.449176e-47 |
| MsG0880043303.01 | MsG0880045290.01 | 0.800766 | 1.235362e-48 | 5.800082e-46 |
| MsG0880043303.01 | MsG0880045555.01 | -0.800940 | 1.138627e-48 | 5.369874e-46 |
| MsG0880043303.01 | MsG0880045653.01 | 0.803829 | 2.891674e-49 | 1.467836e-46 |
| MsG0880043303.01 | MsG0880045736.01 | 0.804354 | 2.248521e-49 | 1.156865e-46 |
| MsG0880043303.01 | MsG0880045937.01 | 0.815206 | 1.041064e-51 | 7.131580e-49 |
| MsG0880043303.01 | MsG0880046058.01 | 0.803557 | 3.292744e-49 | 1.659881e-46 |
| MsG0880043303.01 | MsG0880046088.01 | 0.825042 | 5.814425e-54 | 5.240731e-51 |
| MsG0880043303.01 | MsG0880046126.01 | 0.825550 | 4.410910e-54 | 4.033199e-51 |
| MsG0880043303.01 | MsG0880046285.01 | 0.816133 | 6.469729e-52 | 4.546323e-49 |
| MsG0880043303.01 | MsG0880046733.01 | 0.806221 | 9.139390e-50 | 4.933440e-47 |
| MsG0880043303.01 | MsG0880047191.01 | 0.834891 | 2.305497e-56 | 2.773205e-53 |
| MsG0880043303.01 | MsG0880047427.01 | 0.801011 | 1.100811e-48 | 5.201178e-46 |
| MsG0880043303.01 | MsG0880047448.01 | 0.800126 | 1.667771e-48 | 7.704483e-46 |
| MsG0880043303.01 | MsG0880047608.01 | 0.802915 | 4.472423e-49 | 2.217626e-46 |
| MsG0280010707.01 | MsG0880043303.01 | 0.809706 | 1.657363e-50 | 9.800548e-48 |
| MsG0280010739.01 | MsG0880043303.01 | 0.841063 | 5.963525e-58 | 8.659922e-55 |
| MsG0280011032.01 | MsG0880043303.01 | 0.821007 | 5.074854e-53 | 4.080036e-50 |
| MsG0280011070.01 | MsG0880043303.01 | 0.802574 | 5.260380e-49 | 2.585635e-46 |
| MsG0280011086.01 | MsG0880043303.01 | 0.809200 | 2.128590e-50 | 1.241894e-47 |
| MsG0280011194.01 | MsG0880043303.01 | 0.804789 | 1.825191e-49 | 9.496629e-47 |
| MsG0280011446.01 | MsG0880043303.01 | 0.877878 | 4.413208e-69 | 2.256025e-65 |
| MsG0380011754.01 | MsG0880043303.01 | 0.803511 | 3.367233e-49 | 1.695332e-46 |
| MsG0380011895.01 | MsG0880043303.01 | 0.830589 | 2.697276e-55 | 2.854291e-52 |
| MsG0380012310.01 | MsG0880043303.01 | 0.808270 | 3.363218e-50 | 1.914636e-47 |
| MsG0380012661.01 | MsG0880043303.01 | -0.832910 | 7.217635e-56 | 8.181443e-53 |
| MsG0380013047.01 | MsG0880043303.01 | 0.810585 | 1.071393e-50 | 6.483598e-48 |
| MsG0380013541.01 | MsG0880043303.01 | 0.840914 | 6.525102e-58 | 9.433060e-55 |
| MsG0380014177.01 | MsG0880043303.01 | 0.827715 | 1.342446e-54 | 1.306471e-51 |
| MsG0380014573.01 | MsG0880043303.01 | 0.839566 | 1.467372e-57 | 2.034279e-54 |
| MsG0380014770.01 | MsG0880043303.01 | 0.809172 | 2.157893e-50 | 1.258028e-47 |
| MsG0680032430.01 | MsG0880043303.01 | 0.834151 | 3.538193e-56 | 4.162294e-53 |
| MsG0680032996.01 | MsG0880043303.01 | 0.807842 | 4.147537e-50 | 2.334528e-47 |
| MsG0680034219.01 | MsG0880043303.01 | 0.814156 | 1.778692e-51 | 1.184364e-48 |
| MsG0680035582.01 | MsG0880043303.01 | 0.803346 | 3.643036e-49 | 1.826290e-46 |
| MsG0480018603.01 | MsG0880043303.01 | 0.813400 | 2.609369e-51 | 1.702321e-48 |
| MsG0480018906.01 | MsG0880043303.01 | 0.838767 | 2.364642e-57 | 3.199152e-54 |
| MsG0480018970.01 | MsG0880043303.01 | 0.811638 | 6.335694e-51 | 3.942231e-48 |
| MsG0480020085.01 | MsG0880043303.01 | 0.834652 | 2.648697e-56 | 3.163270e-53 |
| MsG0480020090.01 | MsG0880043303.01 | 0.805831 | 1.104211e-49 | 5.901180e-47 |
| MsG0480020445.01 | MsG0880043303.01 | 0.835546 | 1.575344e-56 | 1.932574e-53 |
| MsG0480020839.01 | MsG0880043303.01 | 0.804995 | 1.653106e-49 | 8.646743e-47 |
| MsG0480021164.01 | MsG0880043303.01 | 0.838430 | 2.888772e-57 | 3.868407e-54 |
| MsG0480021274.01 | MsG0880043303.01 | 0.805913 | 1.061188e-49 | 5.683219e-47 |
| MsG0480021536.01 | MsG0880043303.01 | 0.854046 | 1.597330e-61 | 3.522361e-58 |
| MsG0480021558.01 | MsG0880043303.01 | 0.803587 | 3.246330e-49 | 1.637691e-46 |
| MsG0480021853.01 | MsG0880043303.01 | 0.854279 | 1.367901e-61 | 3.039347e-58 |
| MsG0480021959.01 | MsG0880043303.01 | 0.818564 | 1.835691e-52 | 1.378824e-49 |
| MsG0480022035.01 | MsG0880043303.01 | 0.839298 | 1.722714e-57 | 2.368771e-54 |
| MsG0480022222.01 | MsG0880043303.01 | 0.855524 | 5.952918e-62 | 1.378274e-58 |
| MsG0480022274.01 | MsG0880043303.01 | 0.829902 | 3.970173e-55 | 4.119026e-52 |
| MsG0480022551.01 | MsG0880043303.01 | 0.804089 | 2.553992e-49 | 1.305094e-46 |
| MsG0480022707.01 | MsG0880043303.01 | 0.849776 | 2.601776e-60 | 4.986830e-57 |
| MsG0480022768.01 | MsG0880043303.01 | 0.849883 | 2.429749e-60 | 4.673695e-57 |
| MsG0480022795.01 | MsG0880043303.01 | 0.802662 | 5.044734e-49 | 2.485193e-46 |
| MsG0480023088.01 | MsG0880043303.01 | 0.830178 | 3.398542e-55 | 3.553982e-52 |
| MsG0480023707.01 | MsG0880043303.01 | 0.803587 | 3.245946e-49 | 1.637504e-46 |
| MsG0580024073.01 | MsG0880043303.01 | 0.803332 | 3.667042e-49 | 1.837707e-46 |
| MsG0580024472.01 | MsG0880043303.01 | 0.827041 | 1.947284e-54 | 1.858188e-51 |
| MsG0580025448.01 | MsG0880043303.01 | 0.826819 | 2.200249e-54 | 2.086050e-51 |
| MsG0580025638.01 | MsG0880043303.01 | 0.818857 | 1.575018e-52 | 1.192750e-49 |
| MsG0580025758.01 | MsG0880043303.01 | 0.818564 | 1.835691e-52 | 1.378824e-49 |
| MsG0580026047.01 | MsG0880043303.01 | 0.817997 | 2.466635e-52 | 1.824091e-49 |
| MsG0380015164.01 | MsG0880043303.01 | 0.807885 | 4.062648e-50 | 2.289233e-47 |
| MsG0380015400.01 | MsG0880043303.01 | 0.818968 | 1.485863e-52 | 1.128744e-49 |
| MsG0380015404.01 | MsG0880043303.01 | 0.800314 | 1.527589e-48 | 7.090834e-46 |
| MsG0380015538.01 | MsG0880043303.01 | 0.818372 | 2.028834e-52 | 1.516016e-49 |
| MsG0380015566.01 | MsG0880043303.01 | 0.803707 | 3.065600e-49 | 1.551160e-46 |
| MsG0380015779.01 | MsG0880043303.01 | 0.840485 | 8.454869e-58 | 1.206060e-54 |
| MsG0380015830.01 | MsG0880043303.01 | 0.802660 | 5.047753e-49 | 2.486612e-46 |
| MsG0380016004.01 | MsG0880043303.01 | 0.804358 | 2.244854e-49 | 1.155083e-46 |
| MsG0380016244.01 | MsG0880043303.01 | 0.808259 | 3.381980e-50 | 1.924744e-47 |
| MsG0380016475.01 | MsG0880043303.01 | 0.813168 | 2.933396e-51 | 1.901512e-48 |
| MsG0380016581.01 | MsG0880043303.01 | 0.818394 | 2.005412e-52 | 1.499420e-49 |
| MsG0380016624.01 | MsG0880043303.01 | 0.810664 | 1.030003e-50 | 6.246537e-48 |
| MsG0380016886.01 | MsG0880043303.01 | 0.822817 | 1.933524e-53 | 1.635948e-50 |
| MsG0380016910.01 | MsG0880043303.01 | 0.807900 | 4.032691e-50 | 2.273195e-47 |
| MsG0380017140.01 | MsG0880043303.01 | 0.811278 | 7.584984e-51 | 4.675079e-48 |
| MsG0380017254.01 | MsG0880043303.01 | 0.808183 | 3.509730e-50 | 1.993449e-47 |
| MsG0380017286.01 | MsG0880043303.01 | 0.837851 | 4.072969e-57 | 5.358805e-54 |
| MsG0380017403.01 | MsG0880043303.01 | 0.805807 | 1.117069e-49 | 5.966253e-47 |
| MsG0380017680.01 | MsG0880043303.01 | 0.839940 | 1.172670e-57 | 1.644848e-54 |
| MsG0380018009.01 | MsG0880043303.01 | 0.856022 | 4.258595e-62 | 1.002559e-58 |
| MsG0580027034.01 | MsG0880043303.01 | 0.819623 | 1.053913e-52 | 8.151720e-50 |
| MsG0580027344.01 | MsG0880043303.01 | 0.845530 | 3.834888e-59 | 6.409656e-56 |
| MsG0580027345.01 | MsG0880043303.01 | 0.836389 | 9.631407e-57 | 1.211980e-53 |
| MsG0580028527.01 | MsG0880043303.01 | 0.806913 | 6.529315e-50 | 3.587463e-47 |
| MsG0580028901.01 | MsG0880043303.01 | 0.806965 | 6.365327e-50 | 3.502043e-47 |
| MsG0580029014.01 | MsG0880043303.01 | 0.809056 | 2.284814e-50 | 1.327849e-47 |
| MsG0580029256.01 | MsG0880043303.01 | 0.804207 | 2.412965e-49 | 1.236736e-46 |
| MsG0580029691.01 | MsG0880043303.01 | 0.800803 | 1.214108e-48 | 5.705715e-46 |
| MsG0580029758.01 | MsG0880043303.01 | 0.801146 | 1.033371e-48 | 4.898902e-46 |
| MsG0580029826.01 | MsG0880043303.01 | 0.830244 | 3.275678e-55 | 3.432023e-52 |
| MsG0680030316.01 | MsG0880043303.01 | 0.865176 | 7.138237e-65 | 2.300992e-61 |
| MsG0680030415.01 | MsG0880043303.01 | 0.833901 | 4.085298e-56 | 4.771055e-53 |
| MsG0280006518.01 | MsG0880043303.01 | 0.819610 | 1.060913e-52 | 8.202958e-50 |
| MsG0280006708.01 | MsG0880043303.01 | 0.811933 | 5.462339e-51 | 3.425712e-48 |
| MsG0280007058.01 | MsG0880043303.01 | -0.813013 | 3.172605e-51 | 2.048052e-48 |
| MsG0280007088.01 | MsG0880043303.01 | 0.808802 | 2.589939e-50 | 1.494944e-47 |
| MsG0280007815.01 | MsG0880043303.01 | 0.827055 | 1.932481e-54 | 1.844789e-51 |
| MsG0280008971.01 | MsG0880043303.01 | 0.860949 | 1.445038e-63 | 4.019940e-60 |
| MsG0280009024.01 | MsG0880043303.01 | 0.804001 | 2.664123e-49 | 1.358316e-46 |
| MsG0280009109.01 | MsG0880043303.01 | 0.806220 | 9.144974e-50 | 4.936278e-47 |
| MsG0280010204.01 | MsG0880043303.01 | 0.847397 | 1.186736e-59 | 2.106585e-56 |
| MsG0280010389.01 | MsG0880043303.01 | 0.810909 | 9.118795e-51 | 5.566442e-48 |
| MsG0680035659.01 | MsG0880043303.01 | 0.805802 | 1.119585e-49 | 5.979006e-47 |
| MsG0680035694.01 | MsG0880043303.01 | 0.803364 | 3.611129e-49 | 1.811140e-46 |
| MsG0680035704.01 | MsG0880043303.01 | 0.800831 | 1.198468e-48 | 5.636317e-46 |
| MsG0780037082.01 | MsG0880043303.01 | 0.803475 | 3.424799e-49 | 1.722681e-46 |
| MsG0780037512.01 | MsG0880043303.01 | 0.823899 | 1.080470e-53 | 9.425464e-51 |
| MsG0780037942.01 | MsG0880043303.01 | 0.805808 | 1.116389e-49 | 5.962811e-47 |
| MsG0780038391.01 | MsG0880043303.01 | 0.813428 | 2.573091e-51 | 1.679869e-48 |
| MsG0780038495.01 | MsG0880043303.01 | 0.832181 | 1.094476e-55 | 1.213991e-52 |
| MsG0780038911.01 | MsG0880043303.01 | 0.806826 | 6.813512e-50 | 3.735142e-47 |
| MsG0780039143.01 | MsG0880043303.01 | 0.802032 | 6.800252e-49 | 3.296761e-46 |
| MsG0780039841.01 | MsG0880043303.01 | 0.847690 | 9.859279e-60 | 1.766708e-56 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880043303.01.T01 | MTR_0002s0020 | 70.807 | 161 | 3 | 2 | 1 | 159 | 74 | 192 | 1.83e-71 | 217 |
| MsG0880043303.01.T01 | MTR_4g102770 | 46.711 | 152 | 39 | 1 | 8 | 159 | 76 | 185 | 2.60e-42 | 142 |
| MsG0880043303.01.T01 | MTR_5g010800 | 45.139 | 144 | 36 | 2 | 15 | 157 | 79 | 180 | 9.52e-37 | 128 |
| MsG0880043303.01.T01 | MTR_0113s0040 | 41.781 | 146 | 43 | 1 | 14 | 159 | 84 | 187 | 2.00e-36 | 127 |
| MsG0880043303.01.T01 | MTR_1g101390 | 43.836 | 146 | 40 | 1 | 14 | 159 | 90 | 193 | 3.02e-36 | 127 |
| MsG0880043303.01.T01 | MTR_7g103380 | 57.292 | 96 | 38 | 1 | 67 | 159 | 89 | 184 | 3.07e-33 | 119 |
| MsG0880043303.01.T01 | MTR_1g079180 | 40.845 | 71 | 40 | 1 | 82 | 150 | 94 | 164 | 2.59e-11 | 60.5 |
| MsG0880043303.01.T01 | MTR_1g100613 | 45.614 | 57 | 31 | 0 | 82 | 138 | 76 | 132 | 8.08e-11 | 58.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880043303.01.T01 | AT3G61060 | 45.205 | 146 | 39 | 1 | 14 | 159 | 87 | 191 | 1.74e-39 | 135 |
| MsG0880043303.01.T01 | AT3G61060 | 45.205 | 146 | 38 | 1 | 14 | 159 | 87 | 190 | 3.00e-39 | 135 |
| MsG0880043303.01.T01 | AT1G12710 | 73.418 | 79 | 21 | 0 | 81 | 159 | 114 | 192 | 6.09e-39 | 134 |
| MsG0880043303.01.T01 | AT1G63090 | 60.417 | 96 | 35 | 1 | 67 | 159 | 95 | 190 | 5.07e-37 | 129 |
| MsG0880043303.01.T01 | AT5G52120 | 45.070 | 142 | 36 | 1 | 18 | 159 | 93 | 192 | 3.94e-35 | 124 |
| MsG0880043303.01.T01 | AT3G53000 | 56.989 | 93 | 37 | 1 | 67 | 156 | 90 | 182 | 5.64e-32 | 116 |
| MsG0880043303.01.T01 | AT1G12710 | 47.934 | 121 | 21 | 1 | 81 | 159 | 114 | 234 | 5.14e-31 | 114 |
Find 112 sgRNAs with CRISPR-Local
Find 184 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTACTTTGGTTTAGGAAAT+TGG | 0.146502 | 8:+22230267 | MsG0880043303.01.T01:CDS |
| AGTAGTTCTGGTGCTGAATT+AGG | 0.154613 | 8:+22229678 | MsG0880043303.01.T01:CDS |
| CAACTCGTCGGCCGAGCTTC+TGG | 0.170302 | 8:-22230853 | None:intergenic |
| TTGCGTATCTTCATCAAATT+TGG | 0.170894 | 8:+22230745 | MsG0880043303.01.T01:CDS |
| GTTCCATTGTCAAACAAATT+AGG | 0.220564 | 8:-22229732 | None:intergenic |
| GTTACACTTTCATTTATAAT+TGG | 0.224524 | 8:-22231502 | None:intergenic |
| AAACACGCACTTAGCAATTT+TGG | 0.226458 | 8:+22231246 | MsG0880043303.01.T01:three_prime_UTR |
| TGTTTAGTGTGTGTTGAATA+TGG | 0.244914 | 8:+22229413 | MsG0880043303.01.T01:five_prime_UTR |
| TGTATGTCCCTACTGGAAAT+TGG | 0.254973 | 8:-22230797 | None:intergenic |
| CTCCAAAGCGTTAAGGATTA+CGG | 0.292357 | 8:+22230328 | MsG0880043303.01.T01:CDS |
| AGCATTGGTGTTGATGTATT+TGG | 0.300604 | 8:+22229523 | MsG0880043303.01.T01:five_prime_UTR |
| CTGGATTGTCCAAATGAGTA+TGG | 0.340026 | 8:-22230957 | None:intergenic |
| GTCGTCAGCTGAAACTTTGC+AGG | 0.342371 | 8:-22230910 | None:intergenic |
| GAGGATGATACTAGTAGTTC+TGG | 0.343245 | 8:+22229666 | MsG0880043303.01.T01:CDS |
| GAGGACTGGTGGGGTTTGTT+TGG | 0.351931 | 8:+22230298 | MsG0880043303.01.T01:CDS |
| GTTTAGTGTGTGTTGAATAT+GGG | 0.360951 | 8:+22229414 | MsG0880043303.01.T01:five_prime_UTR |
| CCCCGTAATCCTTAACGCTT+TGG | 0.363217 | 8:-22230330 | None:intergenic |
| TGCTGTATCCCATACTCATT+TGG | 0.366142 | 8:+22230948 | MsG0880043303.01.T01:three_prime_UTR |
| GTTCTTTGAGACCAAGGCTT+GGG | 0.375162 | 8:+22229481 | MsG0880043303.01.T01:five_prime_UTR |
| GGATTGATGATCGCAGATAT+TGG | 0.386282 | 8:+22230351 | MsG0880043303.01.T01:CDS |
| TCCAAAGCGTTAAGGATTAC+GGG | 0.392021 | 8:+22230329 | MsG0880043303.01.T01:CDS |
| AAAATTGCTAAGTGCGTGTT+TGG | 0.396017 | 8:-22231244 | None:intergenic |
| GTACTCTATTATTATTCAGC+TGG | 0.399276 | 8:+22231455 | MsG0880043303.01.T01:three_prime_UTR |
| CGTTGATTATGAGTTTATCA+TGG | 0.400341 | 8:+22229632 | MsG0880043303.01.T01:exon |
| TTCGATAAATTCAATAATTG+AGG | 0.402256 | 8:+22229306 | MsG0880043303.01.T01:five_prime_UTR |
| GTAAGCTAGCACGATTGAAT+AGG | 0.403310 | 8:+22229560 | MsG0880043303.01.T01:five_prime_UTR |
| CAATTTCCTCCAAAGCGTTA+AGG | 0.404456 | 8:+22230321 | MsG0880043303.01.T01:CDS |
| GTTTATCATGGGGAAAGCTT+TGG | 0.404604 | 8:+22229644 | MsG0880043303.01.T01:exon |
| TTTAGTTAAATTCAGATTCT+GGG | 0.405642 | 8:+22229251 | MsG0880043303.01.T01:five_prime_UTR |
| TTTAGTTGAATTGATATTCT+GGG | 0.414953 | 8:+22229342 | MsG0880043303.01.T01:five_prime_UTR |
| TGCATGAAAGTGTAACATTA+TGG | 0.433066 | 8:+22231479 | MsG0880043303.01.T01:three_prime_UTR |
| GGGGATAAAGTCGTTTGGTT+TGG | 0.433648 | 8:+22229189 | MsG0880043303.01.T01:five_prime_UTR |
| AAGCTTCCAAGAGATATGTT+TGG | 0.434199 | 8:+22231320 | MsG0880043303.01.T01:three_prime_UTR |
| GTAGTTCTGGTGCTGAATTA+GGG | 0.434606 | 8:+22229679 | MsG0880043303.01.T01:CDS |
| TTAGTGCATGTTTGGTATCA+TGG | 0.438087 | 8:+22231186 | MsG0880043303.01.T01:three_prime_UTR |
| CTTCGATTCCCAAACAAAAT+CGG | 0.438511 | 8:-22229605 | None:intergenic |
| AAGAAACCAAACATATCTCT+TGG | 0.440209 | 8:-22231326 | None:intergenic |
| TAGGAAATTGGCTAGATAAG+AGG | 0.440813 | 8:+22230279 | MsG0880043303.01.T01:CDS |
| TAAGCTAGCACGATTGAATA+GGG | 0.441465 | 8:+22229561 | MsG0880043303.01.T01:five_prime_UTR |
| TTGAATTCAATTCTGGGTCA+TGG | 0.444018 | 8:+22229066 | MsG0880043303.01.T01:five_prime_UTR |
| CGTATCTTCATCAAATTTGG+TGG | 0.452939 | 8:+22230748 | MsG0880043303.01.T01:CDS |
| GAGTTGACTTAGTGCATGTT+TGG | 0.469491 | 8:+22231178 | MsG0880043303.01.T01:three_prime_UTR |
| AGACCGAGCACATCCATGGC+TGG | 0.472037 | 8:+22230878 | MsG0880043303.01.T01:exon |
| TTGTTGTGCTTTCTCAAAGA+AGG | 0.474880 | 8:+22231422 | MsG0880043303.01.T01:three_prime_UTR |
| GATGAAGATACGCAACTGTA+TGG | 0.475160 | 8:-22230737 | None:intergenic |
| CATACTCATTTGGACAATCC+AGG | 0.476869 | 8:+22230958 | MsG0880043303.01.T01:three_prime_UTR |
| ACTTCAGACTTCACCTTGGC+AGG | 0.477175 | 8:+22230826 | MsG0880043303.01.T01:CDS |
| TATCATGGGGAAAGCTTTGG+AGG | 0.486059 | 8:+22229647 | MsG0880043303.01.T01:exon |
| CGTAATCCTTAACGCTTTGG+AGG | 0.488223 | 8:-22230327 | None:intergenic |
| AGTGAGGGATTGATAAATTG+AGG | 0.491181 | 8:+22229104 | MsG0880043303.01.T01:five_prime_UTR |
| GTTGATTATGAGTTTATCAT+GGG | 0.493311 | 8:+22229633 | MsG0880043303.01.T01:exon |
| TATTTGGGGATAAAGTCGTT+TGG | 0.494435 | 8:+22229184 | MsG0880043303.01.T01:five_prime_UTR |
| TACACACTGTATGTCCCTAC+TGG | 0.496964 | 8:-22230804 | None:intergenic |
| CATGACATAACTTAATAAAG+TGG | 0.498761 | 8:-22230213 | None:intergenic |
| TTTCCTCATGTGTATGTGAT+GGG | 0.501023 | 8:+22229445 | MsG0880043303.01.T01:five_prime_UTR |
| TGACATGGGAGGTACACAAT+TGG | 0.514016 | 8:+22229012 | MsG0880043303.01.T01:five_prime_UTR |
| TCAAATTTGGTGGCTTGAAG+TGG | 0.515749 | 8:+22230758 | MsG0880043303.01.T01:CDS |
| TGTTGTGCTTTCTCAAAGAA+GGG | 0.517282 | 8:+22231423 | MsG0880043303.01.T01:three_prime_UTR |
| TTGATTTCCAATTTCCAGTA+GGG | 0.525554 | 8:+22230790 | MsG0880043303.01.T01:CDS |
| AAGCCTAATTTGTTTGACAA+TGG | 0.526555 | 8:+22229729 | MsG0880043303.01.T01:CDS |
| TTTCAGCTGACGACTTCTGA+TGG | 0.534756 | 8:+22230919 | MsG0880043303.01.T01:three_prime_UTR |
| AATAGATTGCACTCATACCA+AGG | 0.535661 | 8:+22231058 | MsG0880043303.01.T01:three_prime_UTR |
| CTCAGTATATCCCCAAGCCT+TGG | 0.538659 | 8:-22229492 | None:intergenic |
| GGCTAGATAAGAGGACTGGT+GGG | 0.540226 | 8:+22230288 | MsG0880043303.01.T01:CDS |
| TACTGAGAGTTGTGTAGCAT+TGG | 0.545874 | 8:+22229508 | MsG0880043303.01.T01:five_prime_UTR |
| ATTGATTTCCAATTTCCAGT+AGG | 0.547843 | 8:+22230789 | MsG0880043303.01.T01:CDS |
| AAATTTCATTTGATAAGTGA+GGG | 0.548152 | 8:+22229089 | MsG0880043303.01.T01:five_prime_UTR |
| TGGTCGCATAGGGTGTGTCC+AGG | 0.548204 | 8:+22231266 | MsG0880043303.01.T01:three_prime_UTR |
| GTCGACACACAAACCACCCT+TGG | 0.552331 | 8:-22231075 | None:intergenic |
| ATGTGTATGTGATGGGGATG+AGG | 0.553783 | 8:+22229452 | MsG0880043303.01.T01:five_prime_UTR |
| ATTTGGACAATCCAGGGCAC+TGG | 0.554734 | 8:+22230965 | MsG0880043303.01.T01:three_prime_UTR |
| TGCTTTCTCAAAGAAGGGAA+TGG | 0.559848 | 8:+22231428 | MsG0880043303.01.T01:three_prime_UTR |
| GACCGAGCACATCCATGGCT+GGG | 0.560312 | 8:+22230879 | MsG0880043303.01.T01:three_prime_UTR |
| TTCTTTGAGACCAAGGCTTG+GGG | 0.565955 | 8:+22229482 | MsG0880043303.01.T01:five_prime_UTR |
| TAAGTGCGTGTTTGGTAGCA+TGG | 0.566690 | 8:-22231236 | None:intergenic |
| TGGTAGAGGATCCAGTGCCC+TGG | 0.568450 | 8:-22230976 | None:intergenic |
| GACAAAGTTTCACATGGTAG+AGG | 0.568712 | 8:-22230990 | None:intergenic |
| TTCCTCATGTGTATGTGATG+GGG | 0.572484 | 8:+22229446 | MsG0880043303.01.T01:five_prime_UTR |
| CTGGTGCTGAATTAGGGAAG+AGG | 0.572659 | 8:+22229685 | MsG0880043303.01.T01:CDS |
| ATCCCAGCCATGGATGTGCT+CGG | 0.573548 | 8:-22230881 | None:intergenic |
| ATTTGGTGGCTTGAAGTGGA+AGG | 0.573893 | 8:+22230762 | MsG0880043303.01.T01:CDS |
| TGGCAGGTCATCCAGAAGCT+CGG | 0.573902 | 8:+22230842 | MsG0880043303.01.T01:CDS |
| GAAATTTCATTTGATAAGTG+AGG | 0.574742 | 8:+22229088 | MsG0880043303.01.T01:five_prime_UTR |
| TGTAAGACCGAGCACATCCA+TGG | 0.577774 | 8:+22230874 | MsG0880043303.01.T01:exon |
| AGTTCTTTGAGACCAAGGCT+TGG | 0.578094 | 8:+22229480 | MsG0880043303.01.T01:five_prime_UTR |
| AGCTTCTGGATGACCTGCCA+AGG | 0.579970 | 8:-22230839 | None:intergenic |
| ATTGTAGTTCTTTGAGACCA+AGG | 0.580131 | 8:+22229475 | MsG0880043303.01.T01:five_prime_UTR |
| AAATTCAGATTCTGGGTCTG+TGG | 0.580655 | 8:+22229258 | MsG0880043303.01.T01:five_prime_UTR |
| TGTTGATGTATTTGGATCCA+CGG | 0.582007 | 8:+22229531 | MsG0880043303.01.T01:five_prime_UTR |
| TGGCTAGATAAGAGGACTGG+TGG | 0.583666 | 8:+22230287 | MsG0880043303.01.T01:CDS |
| TGGATTGTCCAAATGAGTAT+GGG | 0.593977 | 8:-22230956 | None:intergenic |
| TTTGTTTGACAATGGAACCA+AGG | 0.599995 | 8:+22229737 | MsG0880043303.01.T01:CDS |
| TGGTGCTGAATTAGGGAAGA+GGG | 0.601797 | 8:+22229686 | MsG0880043303.01.T01:CDS |
| CATGATAAACTCATAATCAA+CGG | 0.602923 | 8:-22229631 | None:intergenic |
| CTTAGAGACAAAGTTTCACA+TGG | 0.610031 | 8:-22230996 | None:intergenic |
| GATTGCACTCATACCAAGGG+TGG | 0.619652 | 8:+22231062 | MsG0880043303.01.T01:three_prime_UTR |
| TGCTAGCTTACATATATCCG+TGG | 0.625790 | 8:-22229548 | None:intergenic |
| GCTAGATAAGAGGACTGGTG+GGG | 0.630712 | 8:+22230289 | MsG0880043303.01.T01:CDS |
| AATTGGCTAGATAAGAGGAC+TGG | 0.635322 | 8:+22230284 | MsG0880043303.01.T01:CDS |
| CCAAAGCGTTAAGGATTACG+GGG | 0.637475 | 8:+22230330 | MsG0880043303.01.T01:CDS |
| ACATTTCAACTGAAGAGTCA+AGG | 0.639529 | 8:+22230378 | MsG0880043303.01.T01:CDS |
| ATACTCATTTGGACAATCCA+GGG | 0.642583 | 8:+22230959 | MsG0880043303.01.T01:three_prime_UTR |
| GCTACTATTGCATATAAGCA+CGG | 0.643154 | 8:-22231099 | None:intergenic |
| AACATGCACTAAGTCAACTC+AGG | 0.643845 | 8:-22231175 | None:intergenic |
| TGCTCGGTCTTACAACTCGT+CGG | 0.648475 | 8:-22230865 | None:intergenic |
| ATAGATTGCACTCATACCAA+GGG | 0.657805 | 8:+22231059 | MsG0880043303.01.T01:three_prime_UTR |
| TTGATTATGAGTTTATCATG+GGG | 0.664410 | 8:+22229634 | MsG0880043303.01.T01:exon |
| ATAAATACACAAGTCACACA+TGG | 0.668418 | 8:-22231376 | None:intergenic |
| TTTCTCAAAGAAGGGAATGG+TGG | 0.671891 | 8:+22231431 | MsG0880043303.01.T01:three_prime_UTR |
| ATCCCCATCACATACACATG+AGG | 0.678355 | 8:-22229448 | None:intergenic |
| GTGCGTGTTTGGTAGCATGG+TGG | 0.689271 | 8:-22231233 | None:intergenic |
| GTGTACTTCAGACTTCACCT+TGG | 0.710985 | 8:+22230822 | MsG0880043303.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATCTTATAGTTTTATATTT+TGG | + | Chr8:22229372-22229391 | MsG0880043303.01.T01:five_prime_UTR | 10.0% |
| !!! | ATCTTATAGTTTTATATTTT+GGG | + | Chr8:22229373-22229392 | MsG0880043303.01.T01:five_prime_UTR | 10.0% |
| !! | GGCAAAAAAAAAAAAAATTT+CGG | - | Chr8:22230506-22230525 | None:intergenic | 15.0% |
| !!! | AAATTTTTGGGTTTATATTT+GGG | + | Chr8:22229169-22229188 | MsG0880043303.01.T01:five_prime_UTR | 15.0% |
| !!! | ACTTTTATTTTGTGTATAAA+AGG | + | Chr8:22229805-22229824 | MsG0880043303.01.T01:intron | 15.0% |
| !!! | CTTTTATTTTGTGTATAAAA+GGG | + | Chr8:22229806-22229825 | MsG0880043303.01.T01:intron | 15.0% |
| !!! | TCTTATAGTTTTATATTTTG+GGG | + | Chr8:22229374-22229393 | MsG0880043303.01.T01:five_prime_UTR | 15.0% |
| !!! | TTATGTCAAAAATTTTACTT+TGG | + | Chr8:22230254-22230273 | MsG0880043303.01.T01:CDS | 15.0% |
| !! | AAATTTCATTTGATAAGTGA+GGG | + | Chr8:22229089-22229108 | MsG0880043303.01.T01:five_prime_UTR | 20.0% |
| !! | ACTTATTAGGCTATAATATT+GGG | - | Chr8:22230070-22230089 | None:intergenic | 20.0% |
| !! | ATTCTTGATTGTATGTAAAT+AGG | + | Chr8:22230712-22230731 | MsG0880043303.01.T01:intron | 20.0% |
| !! | GTTACACTTTCATTTATAAT+TGG | - | Chr8:22231505-22231524 | None:intergenic | 20.0% |
| !! | TACTTATTAGGCTATAATAT+TGG | - | Chr8:22230071-22230090 | None:intergenic | 20.0% |
| !! | TTCGATAAATTCAATAATTG+AGG | + | Chr8:22229306-22229325 | MsG0880043303.01.T01:five_prime_UTR | 20.0% |
| !! | TTTAGTTAAATTCAGATTCT+GGG | + | Chr8:22229251-22229270 | MsG0880043303.01.T01:five_prime_UTR | 20.0% |
| !! | TTTAGTTGAATTGATATTCT+GGG | + | Chr8:22229342-22229361 | MsG0880043303.01.T01:five_prime_UTR | 20.0% |
| !!! | AAGTGTAAATTGTTTTTTGT+AGG | + | Chr8:22231135-22231154 | MsG0880043303.01.T01:three_prime_UTR | 20.0% |
| !!! | AAGTGTAACAATATTTTCTT+AGG | + | Chr8:22231516-22231535 | MsG0880043303.01.T01:three_prime_UTR | 20.0% |
| !!! | AATTTTTGGGTTTATATTTG+GGG | + | Chr8:22229170-22229189 | MsG0880043303.01.T01:five_prime_UTR | 20.0% |
| !!! | CAAAAATTTTACTTTGGTTT+AGG | + | Chr8:22230260-22230279 | MsG0880043303.01.T01:CDS | 20.0% |
| !!! | GAAATTTTTGGGTTTATATT+TGG | + | Chr8:22229168-22229187 | MsG0880043303.01.T01:five_prime_UTR | 20.0% |
| !!! | TTTTAGTTAAATTCAGATTC+TGG | + | Chr8:22229250-22229269 | MsG0880043303.01.T01:five_prime_UTR | 20.0% |
| !!! | TTTTAGTTGAATTCAATTCT+GGG | + | Chr8:22229060-22229079 | MsG0880043303.01.T01:five_prime_UTR | 20.0% |
| !!! | TTTTAGTTGAATTGATATTC+TGG | + | Chr8:22229341-22229360 | MsG0880043303.01.T01:five_prime_UTR | 20.0% |
| !!! | TTTTTAGTTGAATTCAATTC+TGG | + | Chr8:22229059-22229078 | MsG0880043303.01.T01:five_prime_UTR | 20.0% |
| ! | CATGACATAACTTAATAAAG+TGG | - | Chr8:22230216-22230235 | None:intergenic | 25.0% |
| ! | CATGATAAACTCATAATCAA+CGG | - | Chr8:22229634-22229653 | None:intergenic | 25.0% |
| ! | CTAACTTATTCTTGCAAAAT+CGG | - | Chr8:22229960-22229979 | None:intergenic | 25.0% |
| ! | CTTGAATTCGTGATATTAAT+GGG | - | Chr8:22230135-22230154 | None:intergenic | 25.0% |
| ! | GAAATTTCATTTGATAAGTG+AGG | + | Chr8:22229088-22229107 | MsG0880043303.01.T01:five_prime_UTR | 25.0% |
| ! | GTTGATTATGAGTTTATCAT+GGG | + | Chr8:22229633-22229652 | MsG0880043303.01.T01:exon | 25.0% |
| ! | TCGTTATCATAAATTCAAAG+TGG | - | Chr8:22230026-22230045 | None:intergenic | 25.0% |
| ! | TCTTGAATTCGTGATATTAA+TGG | - | Chr8:22230136-22230155 | None:intergenic | 25.0% |
| ! | TTAGTATGAAGATTGAAGAA+TGG | + | Chr8:22230571-22230590 | MsG0880043303.01.T01:intron | 25.0% |
| ! | TTGATTATGAGTTTATCATG+GGG | + | Chr8:22229634-22229653 | MsG0880043303.01.T01:exon | 25.0% |
| !! | ATTCTGGTCATTGAAATTTT+TGG | + | Chr8:22229156-22229175 | MsG0880043303.01.T01:five_prime_UTR | 25.0% |
| !! | TTCTGGTCATTGAAATTTTT+GGG | + | Chr8:22229157-22229176 | MsG0880043303.01.T01:five_prime_UTR | 25.0% |
| !! | TTTACTTTGGTTTAGGAAAT+TGG | + | Chr8:22230267-22230286 | MsG0880043303.01.T01:CDS | 25.0% |
| !! | TTTTAATGTATTACTTCACC+TGG | - | Chr8:22231287-22231306 | None:intergenic | 25.0% |
| !!! | GTAAATTGTTTTTTGTAGGT+AGG | + | Chr8:22231139-22231158 | MsG0880043303.01.T01:three_prime_UTR | 25.0% |
| !!! | TTTTAGTTGAATTCAGATTC+TGG | + | Chr8:22229140-22229159 | MsG0880043303.01.T01:five_prime_UTR | 25.0% |
| !!! | TTTTTTTTCCAATACTACCA+AGG | - | Chr8:22229867-22229886 | None:intergenic | 25.0% |
| AAACTTAACTCTTATCAACG+TGG | - | Chr8:22229896-22229915 | None:intergenic | 30.0% | |
| AAGAAACCAAACATATCTCT+TGG | - | Chr8:22231329-22231348 | None:intergenic | 30.0% | |
| ATAAATACACAAGTCACACA+TGG | - | Chr8:22231379-22231398 | None:intergenic | 30.0% | |
| ATCAAGTTCAAACATAACTG+CGG | - | Chr8:22230684-22230703 | None:intergenic | 30.0% | |
| CACATAAAAACTTAGTATCG+TGG | + | Chr8:22230171-22230190 | MsG0880043303.01.T01:CDS | 30.0% | |
| GTACTCTATTATTATTCAGC+TGG | + | Chr8:22231455-22231474 | MsG0880043303.01.T01:three_prime_UTR | 30.0% | |
| GTTCCATTGTCAAACAAATT+AGG | - | Chr8:22229735-22229754 | None:intergenic | 30.0% | |
| GTTTAGTGTGTGTTGAATAT+GGG | + | Chr8:22229414-22229433 | MsG0880043303.01.T01:five_prime_UTR | 30.0% | |
| TATTAGGCTATAATATTGGG+TGG | - | Chr8:22230067-22230086 | None:intergenic | 30.0% | |
| TGTTTAGTGTGTGTTGAATA+TGG | + | Chr8:22229413-22229432 | MsG0880043303.01.T01:five_prime_UTR | 30.0% | |
| TTGATTTCCAATTTCCAGTA+GGG | + | Chr8:22230790-22230809 | MsG0880043303.01.T01:CDS | 30.0% | |
| TTGCGTATCTTCATCAAATT+TGG | + | Chr8:22230745-22230764 | MsG0880043303.01.T01:CDS | 30.0% | |
| ! | AATGGGTTTCTATTTCACTT+TGG | - | Chr8:22230118-22230137 | None:intergenic | 30.0% |
| ! | ATTGATTGATTCCACTGTAT+TGG | + | Chr8:22230530-22230549 | MsG0880043303.01.T01:intron | 30.0% |
| ! | ATTGATTTCCAATTTCCAGT+AGG | + | Chr8:22230789-22230808 | MsG0880043303.01.T01:CDS | 30.0% |
| ! | CGTTGATTATGAGTTTATCA+TGG | + | Chr8:22229632-22229651 | MsG0880043303.01.T01:exon | 30.0% |
| ! | TGCATGAAAGTGTAACATTA+TGG | + | Chr8:22231479-22231498 | MsG0880043303.01.T01:three_prime_UTR | 30.0% |
| !! | AAGCCTAATTTGTTTGACAA+TGG | + | Chr8:22229729-22229748 | MsG0880043303.01.T01:CDS | 30.0% |
| !! | CTATAATATTGGGTGGATTT+TGG | - | Chr8:22230060-22230079 | None:intergenic | 30.0% |
| !!! | TTCTTTTGCCGATTTTGTTT+GGG | + | Chr8:22229597-22229616 | MsG0880043303.01.T01:five_prime_UTR | 30.0% |
| AAAATTGCTAAGTGCGTGTT+TGG | - | Chr8:22231247-22231266 | None:intergenic | 35.0% | |
| AAGCTTCCAAGAGATATGTT+TGG | + | Chr8:22231320-22231339 | MsG0880043303.01.T01:three_prime_UTR | 35.0% | |
| AATAGATTGCACTCATACCA+AGG | + | Chr8:22231058-22231077 | MsG0880043303.01.T01:three_prime_UTR | 35.0% | |
| ACATTTCAACTGAAGAGTCA+AGG | + | Chr8:22230378-22230397 | MsG0880043303.01.T01:CDS | 35.0% | |
| AGTGAGGGATTGATAAATTG+AGG | + | Chr8:22229104-22229123 | MsG0880043303.01.T01:five_prime_UTR | 35.0% | |
| ATACTCATTTGGACAATCCA+GGG | + | Chr8:22230959-22230978 | MsG0880043303.01.T01:three_prime_UTR | 35.0% | |
| ATAGATTGCACTCATACCAA+GGG | + | Chr8:22231059-22231078 | MsG0880043303.01.T01:three_prime_UTR | 35.0% | |
| ATGAGCCAAAATTGTTACCT+TGG | - | Chr8:22229757-22229776 | None:intergenic | 35.0% | |
| CAATGAGTCAGGTTCTATAA+TGG | - | Chr8:22230437-22230456 | None:intergenic | 35.0% | |
| CAGTGGAATCAATCAATCAA+AGG | - | Chr8:22230527-22230546 | None:intergenic | 35.0% | |
| CGTATCTTCATCAAATTTGG+TGG | + | Chr8:22230748-22230767 | MsG0880043303.01.T01:CDS | 35.0% | |
| CTTAGAGACAAAGTTTCACA+TGG | - | Chr8:22230999-22231018 | None:intergenic | 35.0% | |
| CTTCGATTCCCAAACAAAAT+CGG | - | Chr8:22229608-22229627 | None:intergenic | 35.0% | |
| GCTACTATTGCATATAAGCA+CGG | - | Chr8:22231102-22231121 | None:intergenic | 35.0% | |
| GCTGTGTTTCATCTTATGAA+TGG | + | Chr8:22230461-22230480 | MsG0880043303.01.T01:intron | 35.0% | |
| TAAGCTAGCACGATTGAATA+GGG | + | Chr8:22229561-22229580 | MsG0880043303.01.T01:five_prime_UTR | 35.0% | |
| TAGGAAATTGGCTAGATAAG+AGG | + | Chr8:22230279-22230298 | MsG0880043303.01.T01:CDS | 35.0% | |
| TATTTGGGGATAAAGTCGTT+TGG | + | Chr8:22229184-22229203 | MsG0880043303.01.T01:five_prime_UTR | 35.0% | |
| TCAAGTTCAAACATAACTGC+GGG | - | Chr8:22230683-22230702 | None:intergenic | 35.0% | |
| TCATAACCATTGTGAAGAGT+TGG | - | Chr8:22230612-22230631 | None:intergenic | 35.0% | |
| TGGATTGTCCAAATGAGTAT+GGG | - | Chr8:22230959-22230978 | None:intergenic | 35.0% | |
| TGTTGATGTATTTGGATCCA+CGG | + | Chr8:22229531-22229550 | MsG0880043303.01.T01:five_prime_UTR | 35.0% | |
| TGTTGTGCTTTCTCAAAGAA+GGG | + | Chr8:22231423-22231442 | MsG0880043303.01.T01:three_prime_UTR | 35.0% | |
| TTAGTGCATGTTTGGTATCA+TGG | + | Chr8:22231186-22231205 | MsG0880043303.01.T01:three_prime_UTR | 35.0% | |
| TTGAATTCAATTCTGGGTCA+TGG | + | Chr8:22229066-22229085 | MsG0880043303.01.T01:five_prime_UTR | 35.0% | |
| TTGTTGTGCTTTCTCAAAGA+AGG | + | Chr8:22231422-22231441 | MsG0880043303.01.T01:three_prime_UTR | 35.0% | |
| TTTCCTCATGTGTATGTGAT+GGG | + | Chr8:22229445-22229464 | MsG0880043303.01.T01:five_prime_UTR | 35.0% | |
| TTTGTTTGACAATGGAACCA+AGG | + | Chr8:22229737-22229756 | MsG0880043303.01.T01:CDS | 35.0% | |
| ! | AAACACGCACTTAGCAATTT+TGG | + | Chr8:22231246-22231265 | MsG0880043303.01.T01:three_prime_UTR | 35.0% |
| ! | ACTTTTCCAACTCTTCACAA+TGG | + | Chr8:22230603-22230622 | MsG0880043303.01.T01:intron | 35.0% |
| ! | ATCTCTTGGAAGCTTTTTGT+GGG | - | Chr8:22231315-22231334 | None:intergenic | 35.0% |
| ! | TATCTCTTGGAAGCTTTTTG+TGG | - | Chr8:22231316-22231335 | None:intergenic | 35.0% |
| ! | TGGAACCAAGGTAACAATTT+TGG | + | Chr8:22229749-22229768 | MsG0880043303.01.T01:intron | 35.0% |
| ! | TTTTCCTCATGTGTATGTGA+TGG | + | Chr8:22229444-22229463 | MsG0880043303.01.T01:five_prime_UTR | 35.0% |
| !! | AATATTGGGTGGATTTTGGT+TGG | - | Chr8:22230056-22230075 | None:intergenic | 35.0% |
| !! | AGCATTGGTGTTGATGTATT+TGG | + | Chr8:22229523-22229542 | MsG0880043303.01.T01:five_prime_UTR | 35.0% |
| !! | ATTGTAGTTCTTTGAGACCA+AGG | + | Chr8:22229475-22229494 | MsG0880043303.01.T01:five_prime_UTR | 35.0% |
| !! | TTAGCAATTTTGGTCGCATA+GGG | + | Chr8:22231256-22231275 | MsG0880043303.01.T01:three_prime_UTR | 35.0% |
| !!! | CTTCTTTTGCCGATTTTGTT+TGG | + | Chr8:22229596-22229615 | MsG0880043303.01.T01:five_prime_UTR | 35.0% |
| !!! | TGGTGGATTTTCTGAAATCA+CGG | - | Chr8:22231219-22231238 | None:intergenic | 35.0% |
| AAATTCAGATTCTGGGTCTG+TGG | + | Chr8:22229258-22229277 | MsG0880043303.01.T01:five_prime_UTR | 40.0% | |
| AACATGCACTAAGTCAACTC+AGG | - | Chr8:22231178-22231197 | None:intergenic | 40.0% | |
| AAGTTCAAACATAACTGCGG+GGG | - | Chr8:22230681-22230700 | None:intergenic | 40.0% | |
| AATACTACCAAGGATCCGAA+TGG | - | Chr8:22229857-22229876 | None:intergenic | 40.0% | |
| AATTGGCTAGATAAGAGGAC+TGG | + | Chr8:22230284-22230303 | MsG0880043303.01.T01:CDS | 40.0% | |
| ACACAGCATAACAATGAGTC+AGG | - | Chr8:22230448-22230467 | None:intergenic | 40.0% | |
| AGAAAGTGAGTCCAATACAG+TGG | - | Chr8:22230544-22230563 | None:intergenic | 40.0% | |
| ATCCAATACCAACTCTACTG+TGG | + | Chr8:22230631-22230650 | MsG0880043303.01.T01:intron | 40.0% | |
| ATCCATATCCACAGTAGAGT+TGG | - | Chr8:22230642-22230661 | None:intergenic | 40.0% | |
| CAAGTTCAAACATAACTGCG+GGG | - | Chr8:22230682-22230701 | None:intergenic | 40.0% | |
| CATACTCATTTGGACAATCC+AGG | + | Chr8:22230958-22230977 | MsG0880043303.01.T01:three_prime_UTR | 40.0% | |
| CTGGATTGTCCAAATGAGTA+TGG | - | Chr8:22230960-22230979 | None:intergenic | 40.0% | |
| GACAAAGTTTCACATGGTAG+AGG | - | Chr8:22230993-22231012 | None:intergenic | 40.0% | |
| GACTGCACAAGCTACTTATT+AGG | - | Chr8:22230083-22230102 | None:intergenic | 40.0% | |
| GAGGATGATACTAGTAGTTC+TGG | + | Chr8:22229666-22229685 | MsG0880043303.01.T01:CDS | 40.0% | |
| GATGAAGATACGCAACTGTA+TGG | - | Chr8:22230740-22230759 | None:intergenic | 40.0% | |
| GTAAGCTAGCACGATTGAAT+AGG | + | Chr8:22229560-22229579 | MsG0880043303.01.T01:five_prime_UTR | 40.0% | |
| GTTTATCATGGGGAAAGCTT+TGG | + | Chr8:22229644-22229663 | MsG0880043303.01.T01:exon | 40.0% | |
| TACCAACTCTACTGTGGATA+TGG | + | Chr8:22230637-22230656 | MsG0880043303.01.T01:intron | 40.0% | |
| TACTGAGAGTTGTGTAGCAT+TGG | + | Chr8:22229508-22229527 | MsG0880043303.01.T01:five_prime_UTR | 40.0% | |
| TGCTGTATCCCATACTCATT+TGG | + | Chr8:22230948-22230967 | MsG0880043303.01.T01:three_prime_UTR | 40.0% | |
| TGCTTTCTCAAAGAAGGGAA+TGG | + | Chr8:22231428-22231447 | MsG0880043303.01.T01:three_prime_UTR | 40.0% | |
| TGTATGTCCCTACTGGAAAT+TGG | - | Chr8:22230800-22230819 | None:intergenic | 40.0% | |
| TTCCTCATGTGTATGTGATG+GGG | + | Chr8:22229446-22229465 | MsG0880043303.01.T01:five_prime_UTR | 40.0% | |
| TTTCTCAAAGAAGGGAATGG+TGG | + | Chr8:22231431-22231450 | MsG0880043303.01.T01:three_prime_UTR | 40.0% | |
| ! | ATTCGGATCCTTGGTAGTAT+TGG | + | Chr8:22229856-22229875 | MsG0880043303.01.T01:intron | 40.0% |
| ! | CAATTTCCTCCAAAGCGTTA+AGG | + | Chr8:22230321-22230340 | MsG0880043303.01.T01:CDS | 40.0% |
| ! | CTCCAAAGCGTTAAGGATTA+CGG | + | Chr8:22230328-22230347 | MsG0880043303.01.T01:CDS | 40.0% |
| ! | CTTGCAAAATCGGCTTTGTA+AGG | - | Chr8:22229950-22229969 | None:intergenic | 40.0% |
| ! | GAGTTGACTTAGTGCATGTT+TGG | + | Chr8:22231178-22231197 | MsG0880043303.01.T01:three_prime_UTR | 40.0% |
| ! | GGATTGATGATCGCAGATAT+TGG | + | Chr8:22230351-22230370 | MsG0880043303.01.T01:CDS | 40.0% |
| ! | TCAAATTTGGTGGCTTGAAG+TGG | + | Chr8:22230758-22230777 | MsG0880043303.01.T01:CDS | 40.0% |
| ! | TCCAAAGCGTTAAGGATTAC+GGG | + | Chr8:22230329-22230348 | MsG0880043303.01.T01:CDS | 40.0% |
| ! | TGCTAGCTTACATATATCCG+TGG | - | Chr8:22229551-22229570 | None:intergenic | 40.0% |
| !! | AGTAGTTCTGGTGCTGAATT+AGG | + | Chr8:22229678-22229697 | MsG0880043303.01.T01:CDS | 40.0% |
| !! | ATCCACAGTAGAGTTGGTAT+TGG | - | Chr8:22230636-22230655 | None:intergenic | 40.0% |
| !! | CTTAGCAATTTTGGTCGCAT+AGG | + | Chr8:22231255-22231274 | MsG0880043303.01.T01:three_prime_UTR | 40.0% |
| !! | GTAGTTCTGGTGCTGAATTA+GGG | + | Chr8:22229679-22229698 | MsG0880043303.01.T01:CDS | 40.0% |
| !!! | GGGTTTTGAATTCTCTCAAG+CGG | + | Chr8:22229826-22229845 | MsG0880043303.01.T01:intron | 40.0% |
| ATCCCCATCACATACACATG+AGG | - | Chr8:22229451-22229470 | None:intergenic | 45.0% | |
| CGTAATCCTTAACGCTTTGG+AGG | - | Chr8:22230330-22230349 | None:intergenic | 45.0% | |
| GGGGATAAAGTCGTTTGGTT+TGG | + | Chr8:22229189-22229208 | MsG0880043303.01.T01:five_prime_UTR | 45.0% | |
| GTGTACTTCAGACTTCACCT+TGG | + | Chr8:22230822-22230841 | MsG0880043303.01.T01:CDS | 45.0% | |
| TACACACTGTATGTCCCTAC+TGG | - | Chr8:22230807-22230826 | None:intergenic | 45.0% | |
| TCAACTGAAGAGTCAAGGTG+AGG | + | Chr8:22230383-22230402 | MsG0880043303.01.T01:intron | 45.0% | |
| TTTCAGCTGACGACTTCTGA+TGG | + | Chr8:22230919-22230938 | MsG0880043303.01.T01:three_prime_UTR | 45.0% | |
| ! | ATGTGTATGTGATGGGGATG+AGG | + | Chr8:22229452-22229471 | MsG0880043303.01.T01:five_prime_UTR | 45.0% |
| ! | ATTTGGTGGCTTGAAGTGGA+AGG | + | Chr8:22230762-22230781 | MsG0880043303.01.T01:CDS | 45.0% |
| ! | CCAAAGCGTTAAGGATTACG+GGG | + | Chr8:22230330-22230349 | MsG0880043303.01.T01:CDS | 45.0% |
| ! | TAAGTGCGTGTTTGGTAGCA+TGG | - | Chr8:22231239-22231258 | None:intergenic | 45.0% |
| ! | TATCATGGGGAAAGCTTTGG+AGG | + | Chr8:22229647-22229666 | MsG0880043303.01.T01:exon | 45.0% |
| ! | TGACATGGGAGGTACACAAT+TGG | + | Chr8:22229012-22229031 | MsG0880043303.01.T01:five_prime_UTR | 45.0% |
| ! | TGGTGCTGAATTAGGGAAGA+GGG | + | Chr8:22229686-22229705 | MsG0880043303.01.T01:CDS | 45.0% |
| !! | AGTTCTTTGAGACCAAGGCT+TGG | + | Chr8:22229480-22229499 | MsG0880043303.01.T01:five_prime_UTR | 45.0% |
| !! | CAGGTTTTATATCCCAGCCA+TGG | - | Chr8:22230894-22230913 | None:intergenic | 45.0% |
| !! | GTTCTTTGAGACCAAGGCTT+GGG | + | Chr8:22229481-22229500 | MsG0880043303.01.T01:five_prime_UTR | 45.0% |
| !! | TTCTTTGAGACCAAGGCTTG+GGG | + | Chr8:22229482-22229501 | MsG0880043303.01.T01:five_prime_UTR | 45.0% |
| ACTTCAGACTTCACCTTGGC+AGG | + | Chr8:22230826-22230845 | MsG0880043303.01.T01:CDS | 50.0% | |
| ATTTGGACAATCCAGGGCAC+TGG | + | Chr8:22230965-22230984 | MsG0880043303.01.T01:three_prime_UTR | 50.0% | |
| CCCCGTAATCCTTAACGCTT+TGG | - | Chr8:22230333-22230352 | None:intergenic | 50.0% | |
| CTCAGTATATCCCCAAGCCT+TGG | - | Chr8:22229495-22229514 | None:intergenic | 50.0% | |
| GATTGCACTCATACCAAGGG+TGG | + | Chr8:22231062-22231081 | MsG0880043303.01.T01:three_prime_UTR | 50.0% | |
| GTCGTCAGCTGAAACTTTGC+AGG | - | Chr8:22230913-22230932 | None:intergenic | 50.0% | |
| TCTCAAGCGGCTACACCATT+CGG | + | Chr8:22229839-22229858 | MsG0880043303.01.T01:intron | 50.0% | |
| TGCTCGGTCTTACAACTCGT+CGG | - | Chr8:22230868-22230887 | None:intergenic | 50.0% | |
| TGGCTAGATAAGAGGACTGG+TGG | + | Chr8:22230287-22230306 | MsG0880043303.01.T01:CDS | 50.0% | |
| TGTAAGACCGAGCACATCCA+TGG | + | Chr8:22230874-22230893 | MsG0880043303.01.T01:exon | 50.0% | |
| ! | CTGGTGCTGAATTAGGGAAG+AGG | + | Chr8:22229685-22229704 | MsG0880043303.01.T01:CDS | 50.0% |
| ! | GCTAGATAAGAGGACTGGTG+GGG | + | Chr8:22230289-22230308 | MsG0880043303.01.T01:CDS | 50.0% |
| ! | GGCTAGATAAGAGGACTGGT+GGG | + | Chr8:22230288-22230307 | MsG0880043303.01.T01:CDS | 50.0% |
| AGCTTCTGGATGACCTGCCA+AGG | - | Chr8:22230842-22230861 | None:intergenic | 55.0% | |
| ATCCCAGCCATGGATGTGCT+CGG | - | Chr8:22230884-22230903 | None:intergenic | 55.0% | |
| GGCTACACCATTCGGATCCT+TGG | + | Chr8:22229847-22229866 | MsG0880043303.01.T01:intron | 55.0% | |
| GTCGACACACAAACCACCCT+TGG | - | Chr8:22231078-22231097 | None:intergenic | 55.0% | |
| TGGCAGGTCATCCAGAAGCT+CGG | + | Chr8:22230842-22230861 | MsG0880043303.01.T01:CDS | 55.0% | |
| ! | GAGGACTGGTGGGGTTTGTT+TGG | + | Chr8:22230298-22230317 | MsG0880043303.01.T01:CDS | 55.0% |
| ! | GTGCGTGTTTGGTAGCATGG+TGG | - | Chr8:22231236-22231255 | None:intergenic | 55.0% |
| AGACCGAGCACATCCATGGC+TGG | + | Chr8:22230878-22230897 | MsG0880043303.01.T01:exon | 60.0% | |
| GACCGAGCACATCCATGGCT+GGG | + | Chr8:22230879-22230898 | MsG0880043303.01.T01:three_prime_UTR | 60.0% | |
| TGGTAGAGGATCCAGTGCCC+TGG | - | Chr8:22230979-22230998 | None:intergenic | 60.0% | |
| TGGTCGCATAGGGTGTGTCC+AGG | + | Chr8:22231266-22231285 | MsG0880043303.01.T01:three_prime_UTR | 60.0% | |
| CAACTCGTCGGCCGAGCTTC+TGG | - | Chr8:22230856-22230875 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 22229007 | 22231535 | 22229007 | ID=MsG0880043303.01;Name=MsG0880043303.01 |
| Chr8 | mRNA | 22229007 | 22231535 | 22229007 | ID=MsG0880043303.01.T01;Parent=MsG0880043303.01;Name=MsG0880043303.01.T01;_AED=0.09;_eAED=0.09;_QI=644|0.5|0.66|1|0.5|0.33|3|657|165 |
| Chr8 | exon | 22229007 | 22229758 | 22229007 | ID=MsG0880043303.01.T01:exon:15567;Parent=MsG0880043303.01.T01 |
| Chr8 | exon | 22230155 | 22230399 | 22230155 | ID=MsG0880043303.01.T01:exon:15568;Parent=MsG0880043303.01.T01 |
| Chr8 | exon | 22230734 | 22231535 | 22230734 | ID=MsG0880043303.01.T01:exon:15569;Parent=MsG0880043303.01.T01 |
| Chr8 | five_prime_UTR | 22229007 | 22229650 | 22229007 | ID=MsG0880043303.01.T01:five_prime_utr;Parent=MsG0880043303.01.T01 |
| Chr8 | CDS | 22229651 | 22229758 | 22229651 | ID=MsG0880043303.01.T01:cds;Parent=MsG0880043303.01.T01 |
| Chr8 | CDS | 22230155 | 22230399 | 22230155 | ID=MsG0880043303.01.T01:cds;Parent=MsG0880043303.01.T01 |
| Chr8 | CDS | 22230734 | 22230878 | 22230734 | ID=MsG0880043303.01.T01:cds;Parent=MsG0880043303.01.T01 |
| Chr8 | three_prime_UTR | 22230879 | 22231535 | 22230879 | ID=MsG0880043303.01.T01:three_prime_utr;Parent=MsG0880043303.01.T01 |
| Gene Sequence |
| Protein sequence |
