AlfalfaGEDB | MsG0380018000.01

M. sativa cultivar ZhongmuNo.1 / MsG0380018000.01

KEGG: -
GO: GO:0046983
PFAM: PF00010

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380018000.01.T01	XP_013462329.1	82.181	376	29	5	1	348	33	398	0	608

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380018000.01.T01	Q8GY61	61.404	171	61	4	89	255	92	261	5.29E-56	188

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380018000.01.T01	A0A072V302	82.181	376	29	5	1	348	33	398	0.0	608

TFs/TRs:

Gene ID	Type	Classification
MsG0380018000.01.T01	TF	bHLH

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080049039.01	MsG0380018000.01	0.806063	9.868979e-50	5.305677e-47
MsG0080049053.01	MsG0380018000.01	0.807556	4.771446e-50	2.665705e-47
MsG0180004554.01	MsG0380018000.01	0.804337	2.267337e-49	1.166002e-46
MsG0380012780.01	MsG0380018000.01	0.800485	1.409476e-48	6.570794e-46
MsG0380012801.01	MsG0380018000.01	0.810821	9.524131e-51	5.800202e-48
MsG0380015081.01	MsG0380018000.01	0.801326	9.493632e-49	4.520957e-46
MsG0380016957.01	MsG0380018000.01	0.824873	6.376593e-54	5.719594e-51
MsG0380017028.01	MsG0380018000.01	0.811652	6.289970e-51	3.915282e-48
MsG0380018000.01	MsG0480021754.01	0.801361	9.337067e-49	4.450439e-46
MsG0380018000.01	MsG0480023558.01	0.823170	1.599871e-53	1.367155e-50
MsG0380018000.01	MsG0580027887.01	0.819610	1.060797e-52	8.202085e-50
MsG0380018000.01	MsG0680030477.01	0.805707	1.172138e-49	6.244727e-47
MsG0380018000.01	MsG0780038807.01	0.818868	1.565795e-52	1.186093e-49
MsG0380018000.01	MsG0780039422.01	0.819642	1.043375e-52	8.074773e-50
MsG0380018000.01	MsG0780040331.01	0.823031	1.723713e-53	1.467306e-50
MsG0380018000.01	MsG0780041480.01	0.842109	3.159557e-58	4.741619e-55
MsG0280007831.01	MsG0380018000.01	0.805515	1.286373e-49	6.818743e-47
MsG0280008935.01	MsG0380018000.01	0.800225	1.592868e-48	7.376784e-46

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380018000.01.T01	MTR_3g116770	82.181	376	29	5	1	348	33	398	0.0	608
MsG0380018000.01.T01	MTR_3g116770	82.133	375	30	5	1	348	33	397	0.0	607
MsG0380018000.01.T01	MTR_4g070320	60.000	275	65	13	107	348	82	344	1.76e-90	275
MsG0380018000.01.T01	MTR_5g048860	43.493	292	107	11	86	348	296	558	8.60e-54	186
MsG0380018000.01.T01	MTR_7g053410	45.725	269	125	7	82	337	235	495	1.17e-53	184
MsG0380018000.01.T01	MTR_7g053410	45.725	269	125	7	82	337	235	495	2.77e-53	184
MsG0380018000.01.T01	MTR_8g065740	56.886	167	55	3	100	253	230	392	1.29e-51	178
MsG0380018000.01.T01	MTR_8g012290	43.929	280	131	8	82	346	211	479	7.26e-50	174
MsG0380018000.01.T01	MTR_8g012290	43.772	281	131	8	82	346	211	480	8.83e-50	174
MsG0380018000.01.T01	MTR_1g017350	63.235	136	47	2	118	253	215	347	4.75e-49	170
MsG0380018000.01.T01	MTR_1g017350	63.235	136	47	2	118	253	215	347	5.81e-49	170
MsG0380018000.01.T01	MTR_1g017350	64.179	134	45	2	118	251	215	345	2.07e-48	168
MsG0380018000.01.T01	MTR_1g017350	64.179	134	45	2	118	251	215	345	2.60e-48	168
MsG0380018000.01.T01	MTR_5g037250	59.854	137	40	3	118	254	73	194	3.31e-42	147
MsG0380018000.01.T01	MTR_8g062240	70.755	106	24	2	163	267	148	247	7.16e-42	147
MsG0380018000.01.T01	MTR_3g498825	80.899	89	17	0	150	238	131	219	1.85e-41	147
MsG0380018000.01.T01	MTR_7g092510	61.017	118	38	1	142	259	157	266	3.91e-41	147
MsG0380018000.01.T01	MTR_8g099880	82.558	86	14	1	161	245	140	225	4.34e-41	147
MsG0380018000.01.T01	MTR_1g059270	69.892	93	28	0	163	255	157	249	4.47e-40	142
MsG0380018000.01.T01	MTR_1g059270	68.041	97	31	0	163	259	157	253	5.96e-40	144
MsG0380018000.01.T01	MTR_6g084120	60.227	88	24	2	162	247	151	229	3.30e-25	102
MsG0380018000.01.T01	MTR_4g131160	72.727	66	17	1	166	231	199	263	1.63e-22	97.8
MsG0380018000.01.T01	MTR_4g131160	72.727	66	17	1	166	231	196	260	1.68e-22	97.8
MsG0380018000.01.T01	MTR_1g080890	69.697	66	19	1	166	231	193	257	2.68e-21	94.0
MsG0380018000.01.T01	MTR_4g065870	58.462	65	27	0	166	230	355	419	1.13e-15	78.2
MsG0380018000.01.T01	MTR_2g098310	56.923	65	28	0	166	230	332	396	1.23e-15	77.8
MsG0380018000.01.T01	MTR_4g033295	55.385	65	29	0	166	230	118	182	2.24e-15	73.9
MsG0380018000.01.T01	MTR_4g033295	53.731	67	30	1	166	231	118	184	3.63e-15	73.2
MsG0380018000.01.T01	MTR_2g098310	56.061	66	29	0	164	229	330	395	3.77e-15	76.3
MsG0380018000.01.T01	MTR_1g069155	52.174	69	32	1	168	236	319	386	4.96e-15	76.3
MsG0380018000.01.T01	MTR_4g065870	58.065	62	26	0	166	227	355	416	6.02e-15	75.9
MsG0380018000.01.T01	MTR_1g052470	53.623	69	32	0	166	234	298	366	9.99e-15	75.1
MsG0380018000.01.T01	MTR_1g084980	45.205	73	39	1	168	240	464	535	1.21e-14	75.5
MsG0380018000.01.T01	MTR_7g092540	50.000	74	37	0	166	239	243	316	1.43e-14	73.9
MsG0380018000.01.T01	MTR_1g070870	65.152	66	22	1	166	231	120	184	2.29e-14	72.8
MsG0380018000.01.T01	MTR_1g070870	65.152	66	22	1	166	231	123	187	2.45e-14	72.8
MsG0380018000.01.T01	MTR_7g092540	53.125	64	30	0	166	229	243	306	1.04e-13	71.2
MsG0380018000.01.T01	MTR_7g099540	50.000	68	33	1	169	236	255	321	1.91e-13	71.6
MsG0380018000.01.T01	MTR_3g028520	46.753	77	41	0	154	230	310	386	5.63e-13	69.7
MsG0380018000.01.T01	MTR_3g027650	46.753	77	41	0	154	230	310	386	5.63e-13	69.7
MsG0380018000.01.T01	MTR_3g103030	38.462	130	71	3	101	230	172	292	1.36e-12	68.2
MsG0380018000.01.T01	MTR_4g107320	47.368	76	38	2	184	257	60	135	2.09e-12	64.3
MsG0380018000.01.T01	MTR_8g036235	49.231	65	33	0	166	230	316	380	2.16e-12	68.2
MsG0380018000.01.T01	MTR_1g019240	47.692	65	33	1	168	232	87	150	2.21e-12	67.0
MsG0380018000.01.T01	MTR_3g027650	47.297	74	39	0	154	227	310	383	2.52e-12	67.8
MsG0380018000.01.T01	MTR_1g018090	44.828	87	45	2	144	230	254	337	3.51e-12	67.4
MsG0380018000.01.T01	MTR_3g449770	50.000	64	31	1	168	231	311	373	9.90e-12	66.2
MsG0380018000.01.T01	MTR_7g099540	49.206	63	31	1	169	231	255	316	1.30e-11	65.9
MsG0380018000.01.T01	MTR_7g110810	26.639	244	141	6	1	242	70	277	1.49e-11	65.5
MsG0380018000.01.T01	MTR_7g111320	46.053	76	38	2	158	231	422	496	4.48e-11	64.7
MsG0380018000.01.T01	MTR_5g017040	53.571	56	25	1	177	232	116	170	5.38e-11	63.5
MsG0380018000.01.T01	MTR_1g116790	47.059	68	36	0	166	233	265	332	7.71e-11	63.2
MsG0380018000.01.T01	MTR_5g005110	50.000	64	31	1	167	230	225	287	8.11e-11	62.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380018000.01.T01	AT4G34530	61.404	171	61	4	89	255	92	261	5.39e-57	188
MsG0380018000.01.T01	AT2G18300	52.500	200	77	6	58	255	91	274	2.12e-52	176
MsG0380018000.01.T01	AT3G07340	55.249	181	71	3	162	335	254	431	3.66e-52	179
MsG0380018000.01.T01	AT2G18300	53.646	192	71	6	58	247	91	266	1.78e-51	174
MsG0380018000.01.T01	AT3G07340	83.333	96	16	0	162	257	254	349	3.81e-51	176
MsG0380018000.01.T01	AT2G18300	53.061	196	74	6	58	251	91	270	3.83e-51	174
MsG0380018000.01.T01	AT4G36540	49.524	210	64	7	50	255	59	230	1.08e-50	171
MsG0380018000.01.T01	AT4G36540	49.758	207	62	7	50	252	59	227	9.25e-50	169
MsG0380018000.01.T01	AT1G68920	68.033	122	38	1	133	253	269	390	1.47e-49	173
MsG0380018000.01.T01	AT1G68920	68.033	122	38	1	133	253	269	390	1.47e-49	173
MsG0380018000.01.T01	AT1G68920	68.033	122	38	1	133	253	269	390	1.47e-49	173
MsG0380018000.01.T01	AT1G68920	68.033	122	38	1	133	253	268	389	1.59e-49	173
MsG0380018000.01.T01	AT1G10120	55.063	158	70	1	131	288	172	328	3.36e-48	166
MsG0380018000.01.T01	AT1G10120	55.063	158	70	1	131	288	172	328	3.36e-48	166
MsG0380018000.01.T01	AT5G48560	51.471	204	80	8	162	348	297	498	3.33e-47	167
MsG0380018000.01.T01	AT5G48560	68.595	121	36	2	162	281	297	416	1.01e-46	165
MsG0380018000.01.T01	AT3G23690	61.268	142	48	4	116	253	140	278	1.42e-46	162
MsG0380018000.01.T01	AT1G26260	59.589	146	42	3	113	253	126	259	2.88e-46	160
MsG0380018000.01.T01	AT1G26260	59.589	146	42	3	113	253	155	288	7.13e-46	160
MsG0380018000.01.T01	AT1G26260	72.973	111	27	2	146	253	200	310	1.26e-45	160
MsG0380018000.01.T01	AT1G26260	72.973	111	27	2	146	253	200	310	1.26e-45	160
MsG0380018000.01.T01	AT1G26260	72.973	111	27	2	146	253	200	310	1.26e-45	160
MsG0380018000.01.T01	AT1G26260	72.973	111	27	2	146	253	200	310	1.26e-45	160
MsG0380018000.01.T01	AT1G59640	51.124	178	65	5	107	282	79	236	1.79e-43	151
MsG0380018000.01.T01	AT5G50915	61.069	131	42	3	122	245	88	216	1.79e-42	149
MsG0380018000.01.T01	AT5G50915	61.069	131	42	3	122	245	88	216	1.79e-42	149
MsG0380018000.01.T01	AT1G59640	53.797	158	67	2	107	262	79	232	2.87e-42	150
MsG0380018000.01.T01	AT3G57800	55.634	142	55	2	159	293	197	337	3.60e-42	151
MsG0380018000.01.T01	AT5G50915	61.069	131	42	3	122	245	88	216	6.08e-42	148
MsG0380018000.01.T01	AT5G50915	61.069	131	42	3	122	245	88	216	6.08e-42	148
MsG0380018000.01.T01	AT2G42300	70.968	93	27	0	160	252	179	271	9.00e-42	147
MsG0380018000.01.T01	AT2G42300	65.686	102	35	0	160	261	179	280	2.10e-40	145
MsG0380018000.01.T01	AT5G62610	56.923	130	48	2	109	237	102	224	5.42e-38	137
MsG0380018000.01.T01	AT5G62610	56.923	130	48	2	109	237	102	224	5.42e-38	137
MsG0380018000.01.T01	AT1G73830	50.704	142	61	1	102	243	92	224	1.19e-37	135
MsG0380018000.01.T01	AT1G73830	50.704	142	61	1	102	243	92	224	1.39e-37	135
MsG0380018000.01.T01	AT1G18400	75.000	80	20	0	164	243	143	222	2.37e-35	129
MsG0380018000.01.T01	AT1G18400	75.000	80	20	0	164	243	143	222	4.29e-35	129
MsG0380018000.01.T01	AT1G25330	65.217	92	32	0	162	253	100	191	1.10e-33	124
MsG0380018000.01.T01	AT3G57800	41.799	189	55	3	159	293	197	384	3.23e-33	128
MsG0380018000.01.T01	AT5G58010	64.198	81	24	2	165	241	98	177	1.61e-23	99.0
MsG0380018000.01.T01	AT2G24260	71.212	66	18	1	166	231	35	99	5.85e-23	96.3
MsG0380018000.01.T01	AT4G30980	72.727	66	17	1	166	231	130	194	1.21e-22	97.1
MsG0380018000.01.T01	AT4G30980	72.727	66	17	1	166	231	178	242	1.99e-22	97.1
MsG0380018000.01.T01	AT2G24260	71.212	66	18	1	166	231	138	202	3.70e-22	96.3
MsG0380018000.01.T01	AT2G42300	76.087	46	11	0	160	205	179	224	4.90e-18	82.4
MsG0380018000.01.T01	AT2G42300	76.087	46	11	0	160	205	179	224	4.90e-18	82.4
MsG0380018000.01.T01	AT2G42300	76.087	46	11	0	160	205	179	224	6.21e-18	82.4
MsG0380018000.01.T01	AT2G42280	37.984	129	58	4	112	229	227	344	6.51e-16	78.2
MsG0380018000.01.T01	AT2G20180	39.806	103	56	2	129	231	175	271	6.95e-16	78.6
MsG0380018000.01.T01	AT2G20180	39.806	103	56	2	129	231	175	271	6.95e-16	78.6
MsG0380018000.01.T01	AT2G20180	39.806	103	56	2	129	231	175	271	6.95e-16	78.6
MsG0380018000.01.T01	AT2G42280	37.008	127	60	3	112	229	227	342	7.58e-16	78.2
MsG0380018000.01.T01	AT4G28790	28.175	252	117	10	54	301	194	385	1.03e-15	78.2
MsG0380018000.01.T01	AT2G20180	39.806	103	56	2	129	231	246	342	1.03e-15	78.6
MsG0380018000.01.T01	AT2G20180	39.806	103	56	2	129	231	246	342	1.03e-15	78.6
MsG0380018000.01.T01	AT2G20180	39.806	103	56	2	129	231	246	342	1.03e-15	78.6
MsG0380018000.01.T01	AT2G20180	39.806	103	56	2	129	231	246	342	1.03e-15	78.6
MsG0380018000.01.T01	AT1G51140	56.250	64	28	0	166	229	304	367	2.12e-14	73.9
MsG0380018000.01.T01	AT2G20180	39.394	99	54	2	129	227	246	338	2.95e-14	73.2
MsG0380018000.01.T01	AT4G09180	50.746	67	33	0	164	230	182	248	3.10e-14	72.4
MsG0380018000.01.T01	AT1G03040	60.274	73	28	1	159	231	132	203	4.14e-14	72.4
MsG0380018000.01.T01	AT1G09530	50.000	64	31	1	168	231	339	401	4.28e-14	73.6
MsG0380018000.01.T01	AT1G09530	50.000	64	31	1	168	231	339	401	4.28e-14	73.6
MsG0380018000.01.T01	AT1G09530	50.000	64	31	1	168	231	339	401	4.28e-14	73.6
MsG0380018000.01.T01	AT1G09530	50.000	64	31	1	168	231	339	401	4.28e-14	73.6
MsG0380018000.01.T01	AT1G09530	50.000	64	31	1	168	231	339	401	4.28e-14	73.6
MsG0380018000.01.T01	AT1G09530	50.000	64	31	1	168	231	339	401	4.28e-14	73.6
MsG0380018000.01.T01	AT1G03040	60.274	73	28	1	159	231	137	208	5.00e-14	72.4
MsG0380018000.01.T01	AT1G35460	52.308	65	31	0	166	230	181	245	5.83e-14	71.2
MsG0380018000.01.T01	AT4G28800	33.803	142	69	3	169	310	252	368	6.42e-14	72.8
MsG0380018000.01.T01	AT4G02590	63.636	66	23	1	166	231	83	147	7.66e-14	70.9
MsG0380018000.01.T01	AT4G28815	56.897	58	24	1	169	226	71	127	8.06e-14	70.5
MsG0380018000.01.T01	AT1G03040	60.274	73	28	1	159	231	137	208	9.07e-14	71.6
MsG0380018000.01.T01	AT4G02590	63.636	66	23	1	166	231	146	210	1.12e-13	71.2
MsG0380018000.01.T01	AT4G02590	63.636	66	23	1	166	231	146	210	1.12e-13	71.2
MsG0380018000.01.T01	AT4G28815	56.897	58	24	1	169	226	147	203	2.57e-13	70.1
MsG0380018000.01.T01	AT4G28790	30.000	180	90	5	54	233	194	337	3.16e-13	70.1
MsG0380018000.01.T01	AT1G27740	35.897	117	72	2	114	230	117	230	1.56e-12	67.4
MsG0380018000.01.T01	AT2G46970	40.000	100	53	3	144	238	166	263	2.84e-12	67.8
MsG0380018000.01.T01	AT2G46970	40.000	100	53	3	144	238	175	272	2.90e-12	67.8
MsG0380018000.01.T01	AT2G46970	40.000	100	53	3	144	238	197	294	2.97e-12	67.8
MsG0380018000.01.T01	AT4G28800	52.459	61	28	1	169	229	264	323	3.11e-12	67.8
MsG0380018000.01.T01	AT4G33880	41.935	93	51	2	140	230	238	329	5.60e-12	66.6
MsG0380018000.01.T01	AT4G00050	50.769	65	31	1	166	230	105	168	1.49e-11	64.7
MsG0380018000.01.T01	AT4G00050	50.769	65	31	1	166	230	207	270	2.33e-11	65.1
MsG0380018000.01.T01	AT2G43140	50.000	64	32	0	166	229	134	197	2.78e-11	62.8
MsG0380018000.01.T01	AT4G00050	50.769	65	31	1	166	230	207	270	2.89e-11	64.7
MsG0380018000.01.T01	AT4G36930	50.820	61	29	1	172	232	197	256	3.42e-11	64.3
MsG0380018000.01.T01	AT2G43140	50.000	64	32	0	166	229	231	294	3.70e-11	63.9
MsG0380018000.01.T01	AT2G14760	39.286	112	60	3	125	230	191	300	4.60e-11	63.5

Find 77 sgRNAs with CRISPR-Local

Find 218 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TCTTAAGACCTTCATGTATT+AGG	0.240184	3:+103074256	MsG0380018000.01.T01:five_prime_UTR
CCACAGCAATTTGTTCCTTA+TGG	0.249421	3:+103075844	MsG0380018000.01.T01:CDS
TGTGACAGTGTTAGTGTCTT+TGG	0.270501	3:-103074390	None:intergenic
CTCATTCACTCTTCAATTGC+TGG	0.307759	3:+103074772	MsG0380018000.01.T01:CDS
AATTGAAGAGTGAATGAGTT+TGG	0.318103	3:-103074767	None:intergenic
GCTTCTTGTTGAATTGAAAC+AGG	0.337554	3:-103074368	None:intergenic
ATTGGGATTCCCGGTGATCT+TGG	0.342453	3:-103075039	None:intergenic
ATTGAAGAGTGAATGAGTTT+GGG	0.357408	3:-103074766	None:intergenic
TGGAATGAACCCTACAGATA+TGG	0.359058	3:+103075879	MsG0380018000.01.T01:CDS
TTGAATACTACGACTAGTTC+CGG	0.373329	3:+103074470	MsG0380018000.01.T01:five_prime_UTR
CCAGGATGCAACAAAATTAC+AGG	0.386637	3:+103075356	MsG0380018000.01.T01:CDS
AAAGACAAGAGGATCAAAAT+AGG	0.388939	3:+103074999	MsG0380018000.01.T01:CDS
TATGTATGATGCAGGTTAGA+AGG	0.402202	3:+103075291	MsG0380018000.01.T01:intron
GATTCTTCTTGTTTCTCTGT+AGG	0.408773	3:+103075952	MsG0380018000.01.T01:CDS
TTGCTTGTTGTTTAGGCTGT+TGG	0.409201	3:+103074963	MsG0380018000.01.T01:intron
CTTCTAAGTCCCATATCTGT+AGG	0.410368	3:-103075889	None:intergenic
TTTCAGCTTAGTATAGTAGA+TGG	0.419664	3:-103074328	None:intergenic
AAAGTTTGAGGAATGGATAT+AGG	0.423718	3:-103075925	None:intergenic
ACTCTCAGTTGCTAAATTCC+CGG	0.431278	3:-103074489	None:intergenic
AGCTATGGCTGTCGGTGGCT+TGG	0.431984	3:-103075181	None:intergenic
CACGCACACACCTTGAGCTT+AGG	0.457558	3:-103074850	None:intergenic
TGCTCGAACATGAATGTAAT+CGG	0.461397	3:-103075150	None:intergenic
GAAGAATCAATAAAAGTTTG+AGG	0.465715	3:-103075937	None:intergenic
AGAGTTGGCATTTGAAGAGT+TGG	0.474811	3:-103074685	None:intergenic
TGAATACTACGACTAGTTCC+GGG	0.477955	3:+103074471	MsG0380018000.01.T01:five_prime_UTR
ATCAATAAAAGTTTGAGGAA+TGG	0.483827	3:-103075932	None:intergenic
AACAAAATTACAGGAAAAGC+TGG	0.485342	3:+103075365	MsG0380018000.01.T01:CDS
GAGTGAATGAGTTTGGGGTC+TGG	0.491043	3:-103074760	None:intergenic
GGAATGAACCCTACAGATAT+GGG	0.494720	3:+103075880	MsG0380018000.01.T01:CDS
GAGTGAAACGTAGGTAAGGT+TGG	0.494765	3:-103074225	None:intergenic
ATGTATGATGCAGGTTAGAA+GGG	0.501649	3:+103075292	MsG0380018000.01.T01:intron
CTACAGATATGGGACTTAGA+AGG	0.505239	3:+103075890	MsG0380018000.01.T01:CDS
TAATACATGAAGGTCTTAAG+AGG	0.506689	3:-103074254	None:intergenic
TTTGCATTTGCATCACAAGT+AGG	0.509857	3:-103075757	None:intergenic
TTCTAAGTCCCATATCTGTA+GGG	0.511108	3:-103075888	None:intergenic
TCATTCACTCTTCAATTGCT+GGG	0.512372	3:+103074773	MsG0380018000.01.T01:CDS
TCAATATTGAAATCAAGCCT+TGG	0.519925	3:-103075584	None:intergenic
CCAGCATCTAATCCACCATA+AGG	0.520595	3:-103075859	None:intergenic
GAAGTAGTAACATCAAGAGT+TGG	0.521259	3:-103074700	None:intergenic
AACAGTGTTTGAAAGACAAA+GGG	0.521570	3:+103074525	MsG0380018000.01.T01:five_prime_UTR
CAGCAATTTGTTCCTTATGG+TGG	0.522613	3:+103075847	MsG0380018000.01.T01:CDS
AATAGAGTGAAACGTAGGTA+AGG	0.524009	3:-103074229	None:intergenic
TTACTCTTTCAGCTAAGCTA+TGG	0.530789	3:-103075196	None:intergenic
AGAAGAATACTTGAGAGGAA+AGG	0.530803	3:-103074304	None:intergenic
TTCTAAAAGTGTTGTTGACA+TGG	0.531186	3:+103077607	MsG0380018000.01.T01:intron
GGAAAGGAAAGCAAAGCAGT+AGG	0.537257	3:-103074288	None:intergenic
AGGAGAATAGAGTGAAACGT+AGG	0.542930	3:-103074234	None:intergenic
CTTCTTGTTGAATTGAAACA+GGG	0.549462	3:-103074367	None:intergenic
AGAAGATACTTCAAACTCAA+AGG	0.553682	3:+103075097	MsG0380018000.01.T01:CDS
TTCAGCTAAGCTATGGCTGT+CGG	0.556309	3:-103075189	None:intergenic
TAACAGTGTTTGAAAGACAA+AGG	0.558772	3:+103074524	MsG0380018000.01.T01:five_prime_UTR
CCTTATGGTGGATTAGATGC+TGG	0.561668	3:+103075859	MsG0380018000.01.T01:CDS
TATCTGCAAGATTTAGTACC+AGG	0.562856	3:+103075338	MsG0380018000.01.T01:CDS
AGTGTTGTTGACATGGGTGC+AGG	0.570119	3:+103077614	MsG0380018000.01.T01:intron
GACGGCGAATCCAAGATCAC+CGG	0.574848	3:+103075029	MsG0380018000.01.T01:CDS
AGTTTGGGGTCTGGAAGAAG+AGG	0.575334	3:-103074751	None:intergenic
TCATCATAATCCTAAGCTCA+AGG	0.584084	3:+103074840	MsG0380018000.01.T01:CDS
TAAATCAGCAGCAAGTGAAG+AGG	0.586756	3:-103074659	None:intergenic
TTCAAACACTGTTATGTCAG+AGG	0.587410	3:-103074515	None:intergenic
GGTGAATTGAACTGAAGATA+AGG	0.590017	3:-103075823	None:intergenic
ATGGAAGAAGAATACTTGAG+AGG	0.591396	3:-103074309	None:intergenic
TTGGGGTCTGGAAGAAGAGG+TGG	0.593623	3:-103074748	None:intergenic
GAAAGGAAAGCAAAGCAGTA+GGG	0.594538	3:-103074287	None:intergenic
AGCTAAGCTATGGCTGTCGG+TGG	0.605688	3:-103075186	None:intergenic
AATTAGCTACTGTTAATCCA+AGG	0.613412	3:+103075567	MsG0380018000.01.T01:CDS
ACGGCGAATCCAAGATCACC+GGG	0.628691	3:+103075030	MsG0380018000.01.T01:CDS
ATCAAAATAGGTGCTGAGGA+CGG	0.629527	3:+103075011	MsG0380018000.01.T01:CDS
TTGAAGAGTGAATGAGTTTG+GGG	0.630480	3:-103074765	None:intergenic
TCAATGCACCTAATACATGA+AGG	0.633342	3:-103074264	None:intergenic
GACAAAGGGAAAGAATGAAG+TGG	0.633675	3:+103074539	MsG0380018000.01.T01:exon
GAGGATCAAAATAGGTGCTG+AGG	0.635802	3:+103075007	MsG0380018000.01.T01:CDS
TCTAAAAGTGTTGTTGACAT+GGG	0.636395	3:+103077608	MsG0380018000.01.T01:intron
AAGTTGAGAACAAAGACAAG+AGG	0.638388	3:+103074988	MsG0380018000.01.T01:CDS
ATTCATGTTCGAGCACGTCG+TGG	0.642577	3:+103075158	MsG0380018000.01.T01:CDS
TTGAGCTTAGGATTATGATG+AGG	0.647091	3:-103074838	None:intergenic
CCATAAGGAACAAATTGCTG+TGG	0.664587	3:-103075844	None:intergenic
TTCTTGTTGAATTGAAACAG+GGG	0.686215	3:-103074366	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAAAAAAAAACAATTTATGA+TGG	+	Chr3:103076912-103076931	MsG0380018000.01.T01:intron	10.0%
!!	AATAAATAAAGTGAATTAAT+TGG	+	Chr3:103074907-103074926	MsG0380018000.01.T01:intron	10.0%
!!!	TATTTCACAAAATATAATTT+TGG	-	Chr3:103077195-103077214	None:intergenic	10.0%
!!!	TTATATTTTGTGAAATAAAT+TGG	+	Chr3:103077198-103077217	MsG0380018000.01.T01:intron	10.0%
!!	TAAGTAGTAATAATATACTT+TGG	+	Chr3:103075216-103075235	MsG0380018000.01.T01:intron	15.0%
!!	TTTCATTATTGAAAAACAAA+AGG	-	Chr3:103076333-103076352	None:intergenic	15.0%
!!!	TAACATAAACAAATTTGTTA+TGG	-	Chr3:103075521-103075540	None:intergenic	15.0%
!!!	TTTTAATAATAGTACCTAAT+AGG	-	Chr3:103076708-103076727	None:intergenic	15.0%
!!	AAAAAAACAATTTATGATGG+TGG	+	Chr3:103076915-103076934	MsG0380018000.01.T01:intron	20.0%
!!	AAAAAACAATTTATGATGGT+GGG	+	Chr3:103076916-103076935	MsG0380018000.01.T01:intron	20.0%
!!	AGAATGTTCTAATACTAATA+TGG	+	Chr3:103077551-103077570	MsG0380018000.01.T01:intron	20.0%
!!	ATATACACTCAAAAACAATT+TGG	+	Chr3:103076882-103076901	MsG0380018000.01.T01:intron	20.0%
!!	ATTAAGCTAAAATACAGATT+AGG	-	Chr3:103075668-103075687	None:intergenic	20.0%
!!	ATTGTGGAAAAAAAAATTGA+GGG	+	Chr3:103076502-103076521	MsG0380018000.01.T01:intron	20.0%
!!	CATTTGATAAAATAAATGGA+AGG	-	Chr3:103077002-103077021	None:intergenic	20.0%
!!	TAATTATATATGTATGATGC+AGG	+	Chr3:103075283-103075302	MsG0380018000.01.T01:intron	20.0%
!!	TATACACTCAAAAACAATTT+GGG	+	Chr3:103076883-103076902	MsG0380018000.01.T01:intron	20.0%
!!	TCTCCATTTGATAAAATAAA+TGG	-	Chr3:103077006-103077025	None:intergenic	20.0%
!!	TGAGAAAATAAAAGAGATTT+GGG	+	Chr3:103077058-103077077	MsG0380018000.01.T01:intron	20.0%
!!	TTGAGAAAATAAAAGAGATT+TGG	+	Chr3:103077057-103077076	MsG0380018000.01.T01:intron	20.0%
!!!	ATAAACAAATTTGTTATGGA+TGG	-	Chr3:103075517-103075536	None:intergenic	20.0%
!!!	ATTTATTTTATCAAATGGAG+AGG	+	Chr3:103077005-103077024	MsG0380018000.01.T01:intron	20.0%
!!!	ATTTTAATAAAAAGGTGATG+TGG	-	Chr3:103076573-103076592	None:intergenic	20.0%
!!!	CTTCCATTTATTTTATCAAA+TGG	+	Chr3:103077000-103077019	MsG0380018000.01.T01:intron	20.0%
!!!	GTGTTTTAATTTTGTTGTAT+TGG	+	Chr3:103076011-103076030	MsG0380018000.01.T01:intron	20.0%
!!!	TCAATTTTTTTTTCCACAAT+GGG	-	Chr3:103076502-103076521	None:intergenic	20.0%
!	AAAAATATTAACAGAGAGAG+TGG	-	Chr3:103075979-103075998	None:intergenic	25.0%
!	AAAATTAAAACACTAGTGAC+GGG	-	Chr3:103076004-103076023	None:intergenic	25.0%
!	AAATTATACCTTCTACAACA+TGG	+	Chr3:103076074-103076093	MsG0380018000.01.T01:intron	25.0%
!	AAATTGAAGTTGTATAGGTT+TGG	-	Chr3:103076112-103076131	None:intergenic	25.0%
!	AATTATACCTTCTACAACAT+GGG	+	Chr3:103076075-103076094	MsG0380018000.01.T01:intron	25.0%
!	AATTGAAGTTGTATAGGTTT+GGG	-	Chr3:103076111-103076130	None:intergenic	25.0%
!	AGACACATAAAATAGATAGT+GGG	-	Chr3:103076960-103076979	None:intergenic	25.0%
!	AGTGATATGATTTGAAAGAT+AGG	+	Chr3:103077487-103077506	MsG0380018000.01.T01:intron	25.0%
!	ATCAATAAAAGTTTGAGGAA+TGG	-	Chr3:103075935-103075954	None:intergenic	25.0%
!	ATTAAGACCTCATTCTTAAA+TGG	+	Chr3:103076546-103076565	MsG0380018000.01.T01:intron	25.0%
!	CAAAATTAAAACACTAGTGA+CGG	-	Chr3:103076005-103076024	None:intergenic	25.0%
!	CATTGTGGAAAAAAAAATTG+AGG	+	Chr3:103076501-103076520	MsG0380018000.01.T01:intron	25.0%
!	GAAATGGAAATGATACAAAA+TGG	-	Chr3:103076849-103076868	None:intergenic	25.0%
!	GAAGAATCAATAAAAGTTTG+AGG	-	Chr3:103075940-103075959	None:intergenic	25.0%
!	GATCAAAATTGAAGTTGTAT+AGG	-	Chr3:103076117-103076136	None:intergenic	25.0%
!	TAGACACATAAAATAGATAG+TGG	-	Chr3:103076961-103076980	None:intergenic	25.0%
!	TATGCTTGATCAAAATGAAT+GGG	-	Chr3:103076297-103076316	None:intergenic	25.0%
!	TGATCAAGCATAAAAATATC+TGG	+	Chr3:103076305-103076324	MsG0380018000.01.T01:intron	25.0%
!	TGATGATCTATTTGAAAAAG+AGG	+	Chr3:103075604-103075623	MsG0380018000.01.T01:CDS	25.0%
!	TGTGAAATAAATTGGATAAG+AGG	+	Chr3:103077206-103077225	MsG0380018000.01.T01:intron	25.0%
!	TTAAGACCTCATTCTTAAAT+GGG	+	Chr3:103076547-103076566	MsG0380018000.01.T01:intron	25.0%
!	TTATGCTTGATCAAAATGAA+TGG	-	Chr3:103076298-103076317	None:intergenic	25.0%
!!	AATGTAATTTTATTGCACCT+TGG	+	Chr3:103077255-103077274	MsG0380018000.01.T01:intron	25.0%
!!	ATTCTTAAACATTTAAGACC+TGG	+	Chr3:103076461-103076480	MsG0380018000.01.T01:intron	25.0%
!!	GCAATGACATTTTAGATTAA+AGG	-	Chr3:103077125-103077144	None:intergenic	25.0%
!!!	AAATGCAAATTTTCAAGCTA+TGG	+	Chr3:103075771-103075790	MsG0380018000.01.T01:CDS	25.0%
!!!	AATGCAAATTTTCAAGCTAT+GGG	+	Chr3:103075772-103075791	MsG0380018000.01.T01:CDS	25.0%
!!!	ATCTTTAAAGTAGAAAGTAG+AGG	+	Chr3:103076231-103076250	MsG0380018000.01.T01:intron	25.0%
!!!	ATTTTAAGTGGTCTCTAAAA+TGG	-	Chr3:103077373-103077392	None:intergenic	25.0%
!!!	CTCAATTTTTTTTTCCACAA+TGG	-	Chr3:103076503-103076522	None:intergenic	25.0%
!!!	TAATTTGTTGCTTGTTGTTT+AGG	+	Chr3:103074956-103074975	MsG0380018000.01.T01:intron	25.0%
!!!	TCATAATGGATTACAACTTA+GGG	+	Chr3:103077320-103077339	MsG0380018000.01.T01:intron	25.0%
!!!	TCATTTTCACTGATTTTAAG+TGG	-	Chr3:103077385-103077404	None:intergenic	25.0%
!!!	TTCATAATGGATTACAACTT+AGG	+	Chr3:103077319-103077338	MsG0380018000.01.T01:intron	25.0%
!!!	TTTTAAGTGGTCTCTAAAAT+GGG	-	Chr3:103077372-103077391	None:intergenic	25.0%
!!!	TTTTAGATTAAAGGCTTGTT+CGG	-	Chr3:103077116-103077135	None:intergenic	25.0%
	AAAAAGTGATGTGTCAATGT+GGG	+	Chr3:103076735-103076754	MsG0380018000.01.T01:intron	30.0%
	AAAGACAAGAGGATCAAAAT+AGG	+	Chr3:103074999-103075018	MsG0380018000.01.T01:CDS	30.0%
	AAAGTTTGAGGAATGGATAT+AGG	-	Chr3:103075928-103075947	None:intergenic	30.0%
	AACAAAATTACAGGAAAAGC+TGG	+	Chr3:103075365-103075384	MsG0380018000.01.T01:CDS	30.0%
	AACAGTGTTTGAAAGACAAA+GGG	+	Chr3:103074525-103074544	MsG0380018000.01.T01:five_prime_UTR	30.0%
	AATTAGCTACTGTTAATCCA+AGG	+	Chr3:103075567-103075586	MsG0380018000.01.T01:CDS	30.0%
	AATTGAAGAGTGAATGAGTT+TGG	-	Chr3:103074770-103074789	None:intergenic	30.0%
	AGAAGATACTTCAAACTCAA+AGG	+	Chr3:103075097-103075116	MsG0380018000.01.T01:CDS	30.0%
	AGATAGAAAGAAAGAGAGAA+GGG	+	Chr3:103077448-103077467	MsG0380018000.01.T01:intron	30.0%
	ATAAATGGAAGGACACAATT+TGG	-	Chr3:103076991-103077010	None:intergenic	30.0%
	ATTCAATTCATTTATGCAGC+TGG	+	Chr3:103076389-103076408	MsG0380018000.01.T01:intron	30.0%
	ATTGAAGAGTGAATGAGTTT+GGG	-	Chr3:103074769-103074788	None:intergenic	30.0%
	CATAGATAGATCAATGTGAT+AGG	-	Chr3:103075492-103075511	None:intergenic	30.0%
	CTCTAACAAAAGGTCTAATT+GGG	-	Chr3:103076661-103076680	None:intergenic	30.0%
	CTTCTTGTTGAATTGAAACA+GGG	-	Chr3:103074370-103074389	None:intergenic	30.0%
	GGTAATAAAGAATATGCAGA+TGG	+	Chr3:103075625-103075644	MsG0380018000.01.T01:intron	30.0%
	GTGAAAATGATAGTTTCACA+AGG	+	Chr3:103077395-103077414	MsG0380018000.01.T01:intron	30.0%
	TAAAAAGTGATGTGTCAATG+TGG	+	Chr3:103076734-103076753	MsG0380018000.01.T01:intron	30.0%
	TAAAATGGGAGATTGTGAAA+TGG	-	Chr3:103077358-103077377	None:intergenic	30.0%
	TAACAGTGTTTGAAAGACAA+AGG	+	Chr3:103074524-103074543	MsG0380018000.01.T01:five_prime_UTR	30.0%
	TAATACATGAAGGTCTTAAG+AGG	-	Chr3:103074257-103074276	None:intergenic	30.0%
	TCAATATTGAAATCAAGCCT+TGG	-	Chr3:103075587-103075606	None:intergenic	30.0%
	TCTCAATCTCAGTTATTTAC+AGG	+	Chr3:103076159-103076178	MsG0380018000.01.T01:intron	30.0%
	TCTTAAGACCTTCATGTATT+AGG	+	Chr3:103074256-103074275	MsG0380018000.01.T01:five_prime_UTR	30.0%
	TTATTGCACCTTGGATTAAA+AGG	+	Chr3:103077264-103077283	MsG0380018000.01.T01:intron	30.0%
	TTCTTGTTGAATTGAAACAG+GGG	-	Chr3:103074369-103074388	None:intergenic	30.0%
	TTTCAGCTTAGTATAGTAGA+TGG	-	Chr3:103074331-103074350	None:intergenic	30.0%
	TTTCTCAAATATTACCGTGT+TGG	-	Chr3:103077045-103077064	None:intergenic	30.0%
!	AGCGTCAATCATTTTCATAA+TGG	+	Chr3:103077306-103077325	MsG0380018000.01.T01:intron	30.0%
!	CAATTAGACCTTTTGTTAGA+GGG	+	Chr3:103076660-103076679	MsG0380018000.01.T01:intron	30.0%
!!	ACTTCAATTTTGATCAAGCA+AGG	+	Chr3:103076122-103076141	MsG0380018000.01.T01:intron	30.0%
!!	CTTCAATTTTGATCAAGCAA+GGG	+	Chr3:103076123-103076142	MsG0380018000.01.T01:intron	30.0%
!!	TCTAAAAGTGTTGTTGACAT+GGG	+	Chr3:103077608-103077627	MsG0380018000.01.T01:intron	30.0%
!!	TTCTAAAAGTGTTGTTGACA+TGG	+	Chr3:103077607-103077626	MsG0380018000.01.T01:intron	30.0%
!!	TTTGTGTTGATTCCTTACAT+AGG	+	Chr3:103075729-103075748	MsG0380018000.01.T01:intron	30.0%
!!!	TTCTTTGTTGGTGTTGTTTT+TGG	-	Chr3:103075066-103075085	None:intergenic	30.0%
!!!	TTGGTGTTGTTTTTGGTATT+GGG	-	Chr3:103075059-103075078	None:intergenic	30.0%
	AAAATGATTGACGCTATTGC+TGG	-	Chr3:103077301-103077320	None:intergenic	35.0%
	AAAGTAGAGGTAAAAGTGAG+TGG	+	Chr3:103076244-103076263	MsG0380018000.01.T01:intron	35.0%
	AAGTAGAGGTAAAAGTGAGT+GGG	+	Chr3:103076245-103076264	MsG0380018000.01.T01:intron	35.0%
	AAGTAGGAAACACCTATGTA+AGG	-	Chr3:103075744-103075763	None:intergenic	35.0%
	AAGTTGAGAACAAAGACAAG+AGG	+	Chr3:103074988-103075007	MsG0380018000.01.T01:CDS	35.0%
	AATAGAGACCCTCTAACAAA+AGG	-	Chr3:103076671-103076690	None:intergenic	35.0%
	AATAGAGTGAAACGTAGGTA+AGG	-	Chr3:103074232-103074251	None:intergenic	35.0%
	AGAAGAATACTTGAGAGGAA+AGG	-	Chr3:103074307-103074326	None:intergenic	35.0%
	ATCATTTCCATTTCTCCATC+TGG	+	Chr3:103076855-103076874	MsG0380018000.01.T01:intron	35.0%
	ATGATGTCACATATCCACAA+TGG	-	Chr3:103076791-103076810	None:intergenic	35.0%
	ATGGAAGAAGAATACTTGAG+AGG	-	Chr3:103074312-103074331	None:intergenic	35.0%
	ATGTATGATGCAGGTTAGAA+GGG	+	Chr3:103075292-103075311	MsG0380018000.01.T01:intron	35.0%
	CAACAACAACAACAACAACA+AGG	+	Chr3:103074562-103074581	MsG0380018000.01.T01:CDS	35.0%
	CCTCTAACAAAAGGTCTAAT+TGG	-	Chr3:103076662-103076681	None:intergenic	35.0%
	GAAGTAGTAACATCAAGAGT+TGG	-	Chr3:103074703-103074722	None:intergenic	35.0%
	GAGATAGAAAGAAAGAGAGA+AGG	+	Chr3:103077447-103077466	MsG0380018000.01.T01:intron	35.0%
	GCTTCTTGTTGAATTGAAAC+AGG	-	Chr3:103074371-103074390	None:intergenic	35.0%
	GGTGAATTGAACTGAAGATA+AGG	-	Chr3:103075826-103075845	None:intergenic	35.0%
	GTCTCTTCAAAAACAAGTTG+AGG	+	Chr3:103075418-103075437	MsG0380018000.01.T01:CDS	35.0%
	TATCTGCAAGATTTAGTACC+AGG	+	Chr3:103075338-103075357	MsG0380018000.01.T01:CDS	35.0%
	TATGTATGATGCAGGTTAGA+AGG	+	Chr3:103075291-103075310	MsG0380018000.01.T01:intron	35.0%
	TCAATGCACCTAATACATGA+AGG	-	Chr3:103074267-103074286	None:intergenic	35.0%
	TCATCATAATCCTAAGCTCA+AGG	+	Chr3:103074840-103074859	MsG0380018000.01.T01:CDS	35.0%
	TCATTCACTCTTCAATTGCT+GGG	+	Chr3:103074773-103074792	MsG0380018000.01.T01:CDS	35.0%
	TGCTCGAACATGAATGTAAT+CGG	-	Chr3:103075153-103075172	None:intergenic	35.0%
	TGTTTAAGAATCTCCCATTG+TGG	-	Chr3:103076452-103076471	None:intergenic	35.0%
	TTACTCTTTCAGCTAAGCTA+TGG	-	Chr3:103075199-103075218	None:intergenic	35.0%
	TTCAAACACTGTTATGTCAG+AGG	-	Chr3:103074518-103074537	None:intergenic	35.0%
	TTCTAAGTCCCATATCTGTA+GGG	-	Chr3:103075891-103075910	None:intergenic	35.0%
	TTGAAGAGTGAATGAGTTTG+GGG	-	Chr3:103074768-103074787	None:intergenic	35.0%
	TTGAGCTTAGGATTATGATG+AGG	-	Chr3:103074841-103074860	None:intergenic	35.0%
	TTGAGGGTTTAAAAGATGCA+AGG	+	Chr3:103076518-103076537	MsG0380018000.01.T01:intron	35.0%
	TTGGATTAAAAGGTAGCTTG+AGG	+	Chr3:103077274-103077293	MsG0380018000.01.T01:intron	35.0%
	TTTCACAAGGCTTACCTTAT+GGG	+	Chr3:103077408-103077427	MsG0380018000.01.T01:intron	35.0%
	TTTGCATTTGCATCACAAGT+AGG	-	Chr3:103075760-103075779	None:intergenic	35.0%
!	AAATATTACCGTGTTGGTGT+CGG	-	Chr3:103077039-103077058	None:intergenic	35.0%
!	CCAATTAGACCTTTTGTTAG+AGG	+	Chr3:103076659-103076678	MsG0380018000.01.T01:intron	35.0%
!	GATTCTTCTTGTTTCTCTGT+AGG	+	Chr3:103075952-103075971	MsG0380018000.01.T01:CDS	35.0%
!	GGATTATGATGAGGTTTTTC+AGG	-	Chr3:103074832-103074851	None:intergenic	35.0%
!	TCAAGCTACCTTTTAATCCA+AGG	-	Chr3:103077275-103077294	None:intergenic	35.0%
!	TGAGTGGGTTTAATAGATGA+TGG	+	Chr3:103076260-103076279	MsG0380018000.01.T01:intron	35.0%
!	TGCTACACAGTTTTCTTTGT+TGG	-	Chr3:103075078-103075097	None:intergenic	35.0%
!	TTGAATACTACGACTAGTTC+CGG	+	Chr3:103074470-103074489	MsG0380018000.01.T01:five_prime_UTR	35.0%
!	TTTAAGACCTGGTACCTAAT+AGG	+	Chr3:103076472-103076491	MsG0380018000.01.T01:intron	35.0%
!	TTTTGTTAGAGGGTCTCTAT+TGG	+	Chr3:103076670-103076689	MsG0380018000.01.T01:intron	35.0%
!!	AATGGATTACAACTTAGGGT+TGG	+	Chr3:103077324-103077343	MsG0380018000.01.T01:intron	35.0%
!!	ATTACAACTTAGGGTTGGTT+TGG	+	Chr3:103077329-103077348	MsG0380018000.01.T01:intron	35.0%
!!!	GTTGGTGTTGTTTTTGGTAT+TGG	-	Chr3:103075060-103075079	None:intergenic	35.0%
	AAAGATGAGAGTCTCCATTG+TGG	+	Chr3:103076774-103076793	MsG0380018000.01.T01:intron	40.0%
	AATGGAGACTCTCATCTTTG+AGG	-	Chr3:103076773-103076792	None:intergenic	40.0%
	ACTCTCAGTTGCTAAATTCC+CGG	-	Chr3:103074492-103074511	None:intergenic	40.0%
	AGAAGGGACATATACTTGCT+AGG	+	Chr3:103077464-103077483	MsG0380018000.01.T01:intron	40.0%
	AGAGTTGGCATTTGAAGAGT+TGG	-	Chr3:103074688-103074707	None:intergenic	40.0%
	AGGAGAATAGAGTGAAACGT+AGG	-	Chr3:103074237-103074256	None:intergenic	40.0%
	ATACCTTCTACAACATGGGA+AGG	+	Chr3:103076079-103076098	MsG0380018000.01.T01:intron	40.0%
	ATGTGGCCCATTTAAGAATG+AGG	-	Chr3:103076556-103076575	None:intergenic	40.0%
	CCAGGATGCAACAAAATTAC+AGG	+	Chr3:103075356-103075375	MsG0380018000.01.T01:CDS	40.0%
	CCATAAGGAACAAATTGCTG+TGG	-	Chr3:103075847-103075866	None:intergenic	40.0%
	CTACAGATATGGGACTTAGA+AGG	+	Chr3:103075890-103075909	MsG0380018000.01.T01:CDS	40.0%
	CTCATTCACTCTTCAATTGC+TGG	+	Chr3:103074772-103074791	MsG0380018000.01.T01:CDS	40.0%
	CTTCTAAGTCCCATATCTGT+AGG	-	Chr3:103075892-103075911	None:intergenic	40.0%
	GAAAGGAAAGCAAAGCAGTA+GGG	-	Chr3:103074290-103074309	None:intergenic	40.0%
	GACAAAGGGAAAGAATGAAG+TGG	+	Chr3:103074539-103074558	MsG0380018000.01.T01:exon	40.0%
	GGAATGAACCCTACAGATAT+GGG	+	Chr3:103075880-103075899	MsG0380018000.01.T01:CDS	40.0%
	GTTTCACAAGGCTTACCTTA+TGG	+	Chr3:103077407-103077426	MsG0380018000.01.T01:intron	40.0%
	TAAATCAGCAGCAAGTGAAG+AGG	-	Chr3:103074662-103074681	None:intergenic	40.0%
	TATCTCTCCAGATGGAGAAA+TGG	-	Chr3:103076865-103076884	None:intergenic	40.0%
	TGAGTGTATATCTCTCCAGA+TGG	-	Chr3:103076873-103076892	None:intergenic	40.0%
	TGGAATGAACCCTACAGATA+TGG	+	Chr3:103075879-103075898	MsG0380018000.01.T01:CDS	40.0%
	TGTGACAGTGTTAGTGTCTT+TGG	-	Chr3:103074393-103074412	None:intergenic	40.0%
	TGTTGTTCACACATCCCATA+AGG	-	Chr3:103077425-103077444	None:intergenic	40.0%
!	AATATTACCGTGTTGGTGTC+GGG	-	Chr3:103077038-103077057	None:intergenic	40.0%
!	AGTGGGTTCTATCACTAAGT+GGG	-	Chr3:103076943-103076962	None:intergenic	40.0%
!	ATAGTGGGAAAGTGGAAACT+CGG	-	Chr3:103076424-103076443	None:intergenic	40.0%
!	CAGCAATTTGTTCCTTATGG+TGG	+	Chr3:103075847-103075866	MsG0380018000.01.T01:CDS	40.0%
!	CCACAGCAATTTGTTCCTTA+TGG	+	Chr3:103075844-103075863	MsG0380018000.01.T01:CDS	40.0%
!	CCTGTAATTTTGTTGCATCC+TGG	-	Chr3:103075359-103075378	None:intergenic	40.0%
!	TGAATACTACGACTAGTTCC+GGG	+	Chr3:103074471-103074490	MsG0380018000.01.T01:five_prime_UTR	40.0%
!!	ATCAAAATAGGTGCTGAGGA+CGG	+	Chr3:103075011-103075030	MsG0380018000.01.T01:CDS	40.0%
!!	TAGTGGGTTCTATCACTAAG+TGG	-	Chr3:103076944-103076963	None:intergenic	40.0%
!!	TTGCTTGTTGTTTAGGCTGT+TGG	+	Chr3:103074963-103074982	MsG0380018000.01.T01:intron	40.0%
!!!	GTTTTTGGTATTGGGATTCC+CGG	-	Chr3:103075051-103075070	None:intergenic	40.0%
	ATTTGGGTCAGTGTGTGTGT+CGG	+	Chr3:103077074-103077093	MsG0380018000.01.T01:intron	45.0%
	CCAGCATCTAATCCACCATA+AGG	-	Chr3:103075862-103075881	None:intergenic	45.0%
	CCCACTATAGCATCCACAAT+GGG	+	Chr3:103076436-103076455	MsG0380018000.01.T01:intron	45.0%
	CCCATTGTGGATGCTATAGT+GGG	-	Chr3:103076439-103076458	None:intergenic	45.0%
	CCTAATAGGTACTCCCATTG+TGG	+	Chr3:103076486-103076505	MsG0380018000.01.T01:intron	45.0%
	GGAAAGGAAAGCAAAGCAGT+AGG	-	Chr3:103074291-103074310	None:intergenic	45.0%
	GGAGTGGTTGAGTACCTATT+AGG	+	Chr3:103076691-103076710	MsG0380018000.01.T01:intron	45.0%
	TACAATGACATCGACACCGA+CGG	+	Chr3:103076810-103076829	MsG0380018000.01.T01:intron	45.0%
	TCACCTTCCCATGTTGTAGA+AGG	-	Chr3:103076085-103076104	None:intergenic	45.0%
	TCCCACTATAGCATCCACAA+TGG	+	Chr3:103076435-103076454	MsG0380018000.01.T01:intron	45.0%
	TCCCATTGTGGATGCTATAG+TGG	-	Chr3:103076440-103076459	None:intergenic	45.0%
	TGGAGAAGATATTGACCCGT+CGG	-	Chr3:103076829-103076848	None:intergenic	45.0%
	TTAGAGGGTCTCTATTGGAG+TGG	+	Chr3:103076675-103076694	MsG0380018000.01.T01:intron	45.0%
	TTCAGCTAAGCTATGGCTGT+CGG	-	Chr3:103075192-103075211	None:intergenic	45.0%
!	GAGGATCAAAATAGGTGCTG+AGG	+	Chr3:103075007-103075026	MsG0380018000.01.T01:CDS	45.0%
!	TGGATGCTATAGTGGGAAAG+TGG	-	Chr3:103076432-103076451	None:intergenic	45.0%
!!	CCACAATGGGAGTACCTATT+AGG	-	Chr3:103076489-103076508	None:intergenic	45.0%
!!	CCTTATGGTGGATTAGATGC+TGG	+	Chr3:103075859-103075878	MsG0380018000.01.T01:CDS	45.0%
!!	TATTAAATAAATAATATTAG+TGG	+	Chr3:103076633-103076652	MsG0380018000.01.T01:intron	5.0%
!!!	TAAAGATTTTTTTTTTAAAA+TGG	+	Chr3:103076354-103076373	MsG0380018000.01.T01:intron	5.0%
!!!	TGAAAATTATTTTAATAAAA+AGG	-	Chr3:103076581-103076600	None:intergenic	5.0%
!!!	TTTTATTAAAATAATTTTCA+TGG	+	Chr3:103076581-103076600	MsG0380018000.01.T01:intron	5.0%
	ACAATGACATCGACACCGAC+GGG	+	Chr3:103076811-103076830	MsG0380018000.01.T01:intron	50.0%
	ATCCTAACCCGACACCAACA+CGG	+	Chr3:103077028-103077047	MsG0380018000.01.T01:intron	50.0%
	ATTCATGTTCGAGCACGTCG+TGG	+	Chr3:103075158-103075177	MsG0380018000.01.T01:CDS	50.0%
	ATTGGGATTCCCGGTGATCT+TGG	-	Chr3:103075042-103075061	None:intergenic	50.0%
!	AGTGTTGTTGACATGGGTGC+AGG	+	Chr3:103077614-103077633	MsG0380018000.01.T01:intron	50.0%
!	AGTTTGGGGTCTGGAAGAAG+AGG	-	Chr3:103074754-103074773	None:intergenic	50.0%
!	GAGTGAATGAGTTTGGGGTC+TGG	-	Chr3:103074763-103074782	None:intergenic	50.0%
!!	GGGAGTACCTATTAGGTACC+AGG	-	Chr3:103076482-103076501	None:intergenic	50.0%
	ACGGCGAATCCAAGATCACC+GGG	+	Chr3:103075030-103075049	MsG0380018000.01.T01:CDS	55.0%
	AGCTAAGCTATGGCTGTCGG+TGG	-	Chr3:103075189-103075208	None:intergenic	55.0%
	CACGCACACACCTTGAGCTT+AGG	-	Chr3:103074853-103074872	None:intergenic	55.0%
	GACGGCGAATCCAAGATCAC+CGG	+	Chr3:103075029-103075048	MsG0380018000.01.T01:CDS	55.0%
	TTGGGGTCTGGAAGAAGAGG+TGG	-	Chr3:103074751-103074770	None:intergenic	55.0%
!!	TACCGTGTTGGTGTCGGGTT+AGG	-	Chr3:103077033-103077052	None:intergenic	55.0%
	AGCTATGGCTGTCGGTGGCT+TGG	-	Chr3:103075184-103075203	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
Chr3	gene	103074228	103077673	103074228	ID=MsG0380018000.01;Name=MsG0380018000.01
Chr3	mRNA	103074228	103077673	103074228	ID=MsG0380018000.01.T01;Parent=MsG0380018000.01;Name=MsG0380018000.01.T01;_AED=0.23;_eAED=0.24;_QI=325\|0.8\|0.66\|1\|0.8\|0.66\|6\|0\|348
Chr3	exon	103074228	103074861	103074228	ID=MsG0380018000.01.T01:exon:35967;Parent=MsG0380018000.01.T01
Chr3	exon	103074978	103075214	103074978	ID=MsG0380018000.01.T01:exon:35968;Parent=MsG0380018000.01.T01
Chr3	exon	103075305	103075439	103075305	ID=MsG0380018000.01.T01:exon:35969;Parent=MsG0380018000.01.T01
Chr3	exon	103075554	103075625	103075554	ID=MsG0380018000.01.T01:exon:35970;Parent=MsG0380018000.01.T01
Chr3	exon	103075751	103075986	103075751	ID=MsG0380018000.01.T01:exon:35971;Parent=MsG0380018000.01.T01
Chr3	exon	103077616	103077673	103077616	ID=MsG0380018000.01.T01:exon:35972;Parent=MsG0380018000.01.T01
Chr3	five_prime_UTR	103074228	103074552	103074228	ID=MsG0380018000.01.T01:five_prime_utr;Parent=MsG0380018000.01.T01
Chr3	CDS	103074553	103074861	103074553	ID=MsG0380018000.01.T01:cds;Parent=MsG0380018000.01.T01
Chr3	CDS	103074978	103075214	103074978	ID=MsG0380018000.01.T01:cds;Parent=MsG0380018000.01.T01
Chr3	CDS	103075305	103075439	103075305	ID=MsG0380018000.01.T01:cds;Parent=MsG0380018000.01.T01
Chr3	CDS	103075554	103075625	103075554	ID=MsG0380018000.01.T01:cds;Parent=MsG0380018000.01.T01
Chr3	CDS	103075751	103075986	103075751	ID=MsG0380018000.01.T01:cds;Parent=MsG0380018000.01.T01
Chr3	CDS	103077616	103077673	103077616	ID=MsG0380018000.01.T01:cds;Parent=MsG0380018000.01.T01

Gene Sequence

>MsG0380018000.01.T01

ATGAAGTGGCAACAACAACAACAACAACAAGGTTACTTCAACGCTGCTGCTATGTTCTGTTCTTCTCTGCAACAACAACAACAACAACAAGTTGACAATTCTGAAGCCTCTTCACTTGCTGCTGATTTACTGCCAACTCTTCAAATGCCAACTCTTGATGTTACTACTTCTGCTATTTCAAGAACTTTCAGCTGTCCACCTCTTCTTCCAGACCCCAAACTCATTCACTCTTCAATTGCTGGGAAAGACAAACACAATTCTTCTAAGAAAAGAAAACCTGAAAAACCTCATCATAATCCTAAGCTCAAGGCTGTTGGTGAAGTTGAGAACAAAGACAAGAGGATCAAAATAGGTGCTGAGGACGGCGAATCCAAGATCACCGGGAATCCCAATACCAAAAACAACACCAACAAAGAAAACTGTGTAGCAGAAGATACTTCAAACTCAAAGGAAAATTCAAAAGTTTCTGATGTTCAAAAGACCGATTACATTCATGTTCGAGCACGTCGTGGCCAAGCCACCGACAGCCATAGCTTAGCTGAAAGAGTTAGAAGGGAAAAGATTAGTGAGAGAATGAAGTATCTGCAAGATTTAGTACCAGGATGCAACAAAATTACAGGAAAAGCTGGAATGCTTGATGAAATCATCAACTATGTTCAGTCTCTTCAAAAACAAGTTGAGTTCTTGTCAATGAAATTAGCTACTGTTAATCCAAGGCTTGATTTCAATATTGATGATCTATTTGAAAAAGAGGTGTTTCCTACTTGTGATGCAAATGCAAATTTTCAAGCTATGGGAATGTCAACAGAATTGAATAGTAACAATCCTTATCTTCAGTTCAATTCACCACAGCAATTTGTTCCTTATGGTGGATTAGATGCTGGAATGAACCCTACAGATATGGGACTTAGAAGGAGCATAAGTGCTCCTATATCCATTCCTCAAACTTTTATTGATTCTTCTTGTTTCTCTGTAGGTCCACTCTCTCTTGTTGTTGACATGGGTGCAGGTCTTGTTGAAGCAAACAATCTAAAGATCGAGATGTAG

Protein sequence

>MsG0380018000.01.T01

MKWQQQQQQQGYFNAAAMFCSSLQQQQQQQVDNSEASSLAADLLPTLQMPTLDVTTSAISRTFSCPPLLPDPKLIHSSIAGKDKHNSSKKRKPEKPHHNPKLKAVGEVENKDKRIKIGAEDGESKITGNPNTKNNTNKENCVAEDTSNSKENSKVSDVQKTDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQKQVEFLSMKLATVNPRLDFNIDDLFEKEVFPTCDANANFQAMGMSTELNSNNPYLQFNSPQQFVPYGGLDAGMNPTDMGLRRSISAPISIPQTFIDSSCFSVGPLSLVVDMGAGLVEANNLKIEM*