AlfalfaGEDB | MsG0680031178.01

M. sativa cultivar ZhongmuNo.1 / MsG0680031178.01

KEGG: K08360
GO: -
PFAM: PF03188

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0680031178.01.T01	XP_013451269.1	92.245	245	6	1	1	245	1	232	5.45E-157	445

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0680031178.01.T01	Q9SWS1	65.272	239	70	1	1	239	1	226	7.31E-107	311

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0680031178.01.T01	G7ZY50	92.245	245	6	1	1	245	1	232	2.60e-157	445

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080048633.01	MsG0680031178.01	0.834085	3.675115e-56	4.315214e-53
MsG0080048652.01	MsG0680031178.01	0.824122	9.575054e-54	8.405128e-51
MsG0080048694.01	MsG0680031178.01	-0.814290	1.660998e-51	1.110090e-48
MsG0080048695.01	MsG0680031178.01	-0.814597	1.420395e-51	9.571947e-49
MsG0080048889.01	MsG0680031178.01	0.853586	2.167352e-61	4.706528e-58
MsG0080048948.01	MsG0680031178.01	-0.813623	2.330617e-51	1.529674e-48
MsG0080049019.01	MsG0680031178.01	-0.810634	1.045397e-50	6.334563e-48
MsG0080049023.01	MsG0680031178.01	-0.804073	2.573795e-49	1.314697e-46
MsG0180000337.01	MsG0680031178.01	0.817326	3.494569e-52	2.537111e-49
MsG0180000552.01	MsG0680031178.01	0.807617	4.630469e-50	2.591075e-47
MsG0180000719.01	MsG0680031178.01	-0.800586	1.344256e-48	6.282787e-46
MsG0180001925.01	MsG0680031178.01	-0.826901	2.102829e-54	1.998586e-51
MsG0180002099.01	MsG0680031178.01	-0.810196	1.299857e-50	7.785276e-48
MsG0180002214.01	MsG0680031178.01	-0.814691	1.354225e-51	9.148892e-49
MsG0180002546.01	MsG0680031178.01	-0.803934	2.750291e-49	1.399914e-46
MsG0180004124.01	MsG0680031178.01	-0.811709	6.113944e-51	3.811544e-48
MsG0180004125.01	MsG0680031178.01	-0.808943	2.415819e-50	1.399699e-47
MsG0180004510.01	MsG0680031178.01	0.819808	9.563039e-53	7.435738e-50
MsG0180004559.01	MsG0680031178.01	0.821922	3.120971e-53	2.574062e-50
MsG0180004731.01	MsG0680031178.01	-0.801840	7.445378e-49	3.592107e-46
MsG0180004737.01	MsG0680031178.01	-0.803784	2.954706e-49	1.498092e-46
MsG0180004761.01	MsG0680031178.01	-0.833390	5.481331e-56	6.303535e-53
MsG0180005272.01	MsG0680031178.01	0.820383	7.062897e-53	5.580273e-50
MsG0180005369.01	MsG0680031178.01	-0.808656	2.782679e-50	1.600047e-47
MsG0180005514.01	MsG0680031178.01	0.824730	6.888887e-54	6.154031e-51
MsG0180005817.01	MsG0680031178.01	-0.806882	6.627336e-50	3.638412e-47
MsG0380013063.01	MsG0680031178.01	-0.805084	1.583428e-49	8.301313e-47
MsG0380013892.01	MsG0680031178.01	-0.801835	7.466248e-49	3.601570e-46
MsG0380013928.01	MsG0680031178.01	-0.802877	4.553293e-49	2.255502e-46
MsG0380013986.01	MsG0680031178.01	-0.807152	5.811797e-50	3.213054e-47
MsG0380013997.01	MsG0680031178.01	-0.800404	1.464523e-48	6.813400e-46
MsG0380014016.01	MsG0680031178.01	-0.804656	1.945713e-49	1.008863e-46
MsG0380014029.01	MsG0680031178.01	-0.804707	1.898018e-49	9.854552e-47
MsG0380014410.01	MsG0680031178.01	0.805256	1.457696e-49	7.675608e-47
MsG0380014735.01	MsG0680031178.01	-0.811563	6.577094e-51	4.084705e-48
MsG0680031178.01	MsG0680035870.01	-0.808551	2.929467e-50	1.679971e-47
MsG0680031178.01	MsG0780036890.01	0.800289	1.545462e-48	7.169100e-46
MsG0680031178.01	MsG0780037751.01	0.809540	1.799228e-50	1.059253e-47
MsG0680031178.01	MsG0780038305.01	0.833911	4.061763e-56	4.745167e-53
MsG0680031178.01	MsG0780039431.01	0.803019	4.256531e-49	2.116017e-46
MsG0680031178.01	MsG0780039839.01	-0.800658	1.299698e-48	6.085722e-46
MsG0680031178.01	MsG0780040266.01	0.800946	1.135454e-48	5.355734e-46
MsG0680031178.01	MsG0780041531.01	-0.854665	1.057899e-61	2.380380e-58
MsG0680031178.01	MsG0880043261.01	0.849076	4.076809e-60	7.639163e-57
MsG0680031178.01	MsG0880043551.01	0.819765	9.781367e-53	7.596370e-50
MsG0680031178.01	MsG0880043961.01	0.864210	1.432883e-64	4.462678e-61
MsG0680031178.01	MsG0880043983.01	0.844439	7.557201e-59	1.220011e-55
MsG0680031178.01	MsG0880043989.01	0.879480	1.203677e-69	6.536304e-66
MsG0680031178.01	MsG0880045054.01	0.814250	1.695080e-51	1.131595e-48
MsG0680031178.01	MsG0880045385.01	-0.807206	5.660314e-50	3.133770e-47
MsG0680031178.01	MsG0880045683.01	0.836789	7.613984e-57	9.697687e-54
MsG0680031178.01	MsG0880045968.01	-0.800704	1.272311e-48	5.963988e-46
MsG0680031178.01	MsG0880046174.01	-0.849664	2.797291e-60	5.342070e-57
MsG0680031178.01	MsG0880046630.01	-0.816008	6.898410e-52	4.831051e-49
MsG0680031178.01	MsG0880047465.01	0.814529	1.471174e-51	9.895818e-49
MsG0680031178.01	MsG0880047493.01	0.835721	1.423083e-56	1.755073e-53
MsG0480019017.01	MsG0680031178.01	0.823880	1.091415e-53	9.516120e-51
MsG0480019028.01	MsG0680031178.01	-0.800086	1.699339e-48	7.842299e-46
MsG0480019038.01	MsG0680031178.01	0.801407	9.138422e-49	4.360682e-46
MsG0480020263.01	MsG0680031178.01	0.802806	4.710266e-49	2.329199e-46
MsG0480020345.01	MsG0680031178.01	0.803559	3.290561e-49	1.658846e-46
MsG0480020957.01	MsG0680031178.01	0.815079	1.110625e-51	7.582211e-49
MsG0480020958.01	MsG0680031178.01	0.820065	8.350316e-53	6.539739e-50
MsG0480020986.01	MsG0680031178.01	0.809074	2.264729e-50	1.316841e-47
MsG0480022167.01	MsG0680031178.01	0.816189	6.288077e-52	4.425418e-49
MsG0480022407.01	MsG0680031178.01	0.804570	2.027441e-49	1.048906e-46
MsG0480023152.01	MsG0680031178.01	-0.821104	4.820541e-53	3.885703e-50
MsG0480023195.01	MsG0680031178.01	0.853122	2.943152e-61	6.291818e-58
MsG0480023242.01	MsG0680031178.01	-0.803214	3.879656e-49	1.938382e-46
MsG0480023322.01	MsG0680031178.01	0.804911	1.720602e-49	8.981338e-47
MsG0480023324.01	MsG0680031178.01	0.806059	9.887062e-50	5.314898e-47
MsG0580024398.01	MsG0680031178.01	0.803613	3.206460e-49	1.618605e-46
MsG0580024804.01	MsG0680031178.01	-0.819632	1.048915e-52	8.115178e-50
MsG0580025117.01	MsG0680031178.01	0.804076	2.569669e-49	1.312712e-46
MsG0580025620.01	MsG0680031178.01	0.819134	1.361863e-52	1.039145e-49
MsG0380016476.01	MsG0680031178.01	0.814853	1.246809e-51	8.459966e-49
MsG0380016524.01	MsG0680031178.01	0.816692	4.852114e-52	3.461909e-49
MsG0380016935.01	MsG0680031178.01	-0.808338	3.252401e-50	1.854842e-47
MsG0380017231.01	MsG0680031178.01	0.863973	1.697711e-64	5.243755e-61
MsG0380017405.01	MsG0680031178.01	-0.807182	5.726761e-50	3.168583e-47
MsG0380017730.01	MsG0680031178.01	0.800823	1.202785e-48	5.655340e-46
MsG0380017804.01	MsG0680031178.01	-0.826000	3.449070e-54	3.194596e-51
MsG0380017928.01	MsG0680031178.01	-0.808270	3.362819e-50	1.914423e-47
MsG0380018060.01	MsG0680031178.01	0.820093	8.229246e-53	6.450181e-50
MsG0480018333.01	MsG0680031178.01	0.805944	1.045140e-49	5.601847e-47
MsG0580028565.01	MsG0680031178.01	0.802956	4.386776e-49	2.177353e-46
MsG0580029023.01	MsG0680031178.01	0.818191	2.229317e-52	1.657394e-49
MsG0580029583.01	MsG0680031178.01	0.811603	6.445466e-51	4.006995e-48
MsG0580029623.01	MsG0680031178.01	0.814379	1.587826e-51	1.063735e-48
MsG0580029792.01	MsG0680031178.01	-0.854292	1.356325e-61	3.014738e-58
MsG0580030179.01	MsG0680031178.01	0.818645	1.759376e-52	1.324450e-49
MsG0680030315.01	MsG0680031178.01	0.863440	2.486241e-64	7.536753e-61
MsG0280006883.01	MsG0680031178.01	0.812882	3.390018e-51	2.180748e-48
MsG0280007427.01	MsG0680031178.01	0.802069	6.683722e-49	3.243362e-46
MsG0280007686.01	MsG0680031178.01	0.811327	7.400203e-51	4.567067e-48
MsG0280007786.01	MsG0680031178.01	0.818046	2.404871e-52	1.780698e-49
MsG0280008328.01	MsG0680031178.01	0.801233	9.919950e-49	4.712983e-46
MsG0280008553.01	MsG0680031178.01	0.813789	2.142707e-51	1.412638e-48
MsG0280008820.01	MsG0680031178.01	-0.843203	1.619171e-58	2.514372e-55
MsG0280009742.01	MsG0680031178.01	-0.810991	8.753010e-51	5.355296e-48
MsG0280009971.01	MsG0680031178.01	0.802415	5.670599e-49	2.776279e-46
MsG0280010053.01	MsG0680031178.01	0.807367	5.233946e-50	2.909770e-47
MsG0280010142.01	MsG0680031178.01	-0.801163	1.025083e-48	4.861671e-46
MsG0280010240.01	MsG0680031178.01	0.811277	7.588722e-51	4.677298e-48
MsG0280010296.01	MsG0680031178.01	0.819151	1.350329e-52	1.030792e-49

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0680031178.01.T01	MTR_6g017105	92.245	245	6	1	1	245	1	232	6.60e-161	445
MsG0680031178.01.T01	MTR_1g100643	44.915	236	114	3	5	240	6	225	7.11e-61	191
MsG0680031178.01.T01	MTR_5g053250	43.304	224	111	3	16	236	18	228	2.58e-53	172
MsG0680031178.01.T01	MTR_1g100643	46.243	173	92	1	68	240	1	172	1.62e-48	158
MsG0680031178.01.T01	MTR_5g053250	48.521	169	86	1	68	236	1	168	2.81e-48	157
MsG0680031178.01.T01	MTR_5g053250	39.044	251	110	4	16	236	18	255	3.88e-48	160
MsG0680031178.01.T01	MTR_1g033360	35.514	214	120	2	20	233	21	216	6.40e-43	145
MsG0680031178.01.T01	MTR_1g033390	33.173	208	122	2	19	226	14	204	2.23e-35	125

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0680031178.01.T01	AT5G38630	65.272	239	70	1	1	239	1	226	7.45e-108	311
MsG0680031178.01.T01	AT4G25570	39.437	213	115	2	16	228	15	213	4.83e-51	166
MsG0680031178.01.T01	AT4G25570	39.623	212	114	2	17	228	57	254	2.14e-50	166
MsG0680031178.01.T01	AT1G26100	46.023	176	92	2	63	237	43	216	3.60e-46	154
MsG0680031178.01.T01	AT1G14730	32.877	219	127	3	19	236	25	224	2.62e-33	120

Find 51 sgRNAs with CRISPR-Local

Find 177 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CTGCTGGATTTGCAACATTT+TGG	0.259463	6:-15626334	MsG0680031178.01.T01:CDS
ATTTCTACAGCCTGCATTCA+TGG	0.301912	6:-15626922	MsG0680031178.01.T01:CDS
ATATTCCAATGAAGCACTTT+TGG	0.310108	6:-15626162	MsG0680031178.01.T01:CDS
ATGCCATGGCATGTGTTCTT+TGG	0.349931	6:-15626275	MsG0680031178.01.T01:CDS
GTTGACCAAAAGTGCTTCAT+TGG	0.353751	6:+15626157	None:intergenic
GTTGTAAGATGTATTCGATT+AGG	0.363614	6:-15625997	MsG0680031178.01.T01:three_prime_UTR
TTAGGTGGCTTTGTTATTCT+CGG	0.365202	6:-15626110	MsG0680031178.01.T01:CDS
TACAGCCTGCATTCATGGTT+AGG	0.404505	6:-15626917	MsG0680031178.01.T01:CDS
CTTGCGTACAAGACGGTATC+CGG	0.406550	6:-15627058	MsG0680031178.01.T01:CDS
CTCTCACTGTTGCGAAGATC+GGG	0.412864	6:+15628997	None:intergenic
AATAAAGCTGATGATATAAG+AGG	0.418425	6:-15626068	MsG0680031178.01.T01:CDS
CTACTATTTCTTGAGCCTCC+TGG	0.421659	6:+15626308	None:intergenic
AAAATACCTGAATGAAGAAT+AGG	0.424840	6:+15626879	None:intergenic
TTTGAGCTTAATTGGTCTCT+GGG	0.428516	6:-15626981	MsG0680031178.01.T01:CDS
CATCCGGTGCTGATGGTGAT+TGG	0.435104	6:-15627857	MsG0680031178.01.T01:CDS
TTCGCAACAGTGAGAGGTAT+TGG	0.436891	6:-15628990	MsG0680031178.01.T01:CDS
AATATTTGTCAGTTGGCTGC+TGG	0.438507	6:-15626350	MsG0680031178.01.T01:intron
ATATGACGTTGCCGGTTTGA+AGG	0.453380	6:+15626189	None:intergenic
ATTGGCCTTGTTCTGATCAA+TGG	0.456315	6:-15627839	MsG0680031178.01.T01:CDS
CCTCTCACTGTTGCGAAGAT+CGG	0.456843	6:+15628996	None:intergenic
ATATCGCGATATGACGTTGC+CGG	0.458503	6:+15626181	None:intergenic
GTATTCCATGTAGGTTCATC+CGG	0.479369	6:-15627873	MsG0680031178.01.T01:intron
TAATTGGTCTCTGGGCTGCT+TGG	0.489448	6:-15626973	MsG0680031178.01.T01:CDS
TCGCTACTCTTCTGTTAACA+TGG	0.495998	6:-15628959	MsG0680031178.01.T01:CDS
GCTATAGCCACAACTGCTAC+TGG	0.500884	6:-15626233	MsG0680031178.01.T01:CDS
CCTGAATGAAGAATAGGAAA+AGG	0.505159	6:+15626885	None:intergenic
AAGGCTACATTCCTTCAAAC+CGG	0.515114	6:-15626200	MsG0680031178.01.T01:CDS
ACATGGGTTGTTCATTTCAG+AGG	0.537822	6:-15628942	MsG0680031178.01.T01:CDS
TAAAAGACCAGTAGCAGTTG+TGG	0.540299	6:+15626226	None:intergenic
ATCGGGAATTTGACTACTGG+TGG	0.544162	6:+15629014	None:intergenic
CGCTACTCTTCTGTTAACAT+GGG	0.547073	6:-15628958	MsG0680031178.01.T01:CDS
CAAGGCCTAACCATGAATGC+AGG	0.550817	6:+15626912	None:intergenic
TGGTATCTATATCTATGCAT+TGG	0.564702	6:-15626255	MsG0680031178.01.T01:CDS
TCATCAGCTTTATTATAAGT+CGG	0.565682	6:+15626077	None:intergenic
GATATAAGAGGAAATGAGTG+AGG	0.565852	6:-15626056	MsG0680031178.01.T01:exon
AAGATCGGGAATTTGACTAC+TGG	0.568641	6:+15629011	None:intergenic
AGGCCAATCACCATCAGCAC+CGG	0.581269	6:+15627854	None:intergenic
CCGATCTTCGCAACAGTGAG+AGG	0.584109	6:-15628996	MsG0680031178.01.T01:CDS
GTAGGTTCATCCGGTGCTGA+TGG	0.584675	6:-15627864	MsG0680031178.01.T01:intron
TGGGTTGTTCATTTCAGAGG+AGG	0.588663	6:-15628939	MsG0680031178.01.T01:CDS
AATGAAGAATAGGAAAAGGC+AGG	0.590163	6:+15626889	None:intergenic
AGAATAGGAAAAGGCAGGCA+AGG	0.599473	6:+15626894	None:intergenic
TGGAAATTTCACAATGACAA+GGG	0.615433	6:-15626953	MsG0680031178.01.T01:CDS
GTAGAGTTGCGCTAATGCCA+TGG	0.616539	6:-15626289	MsG0680031178.01.T01:CDS
CTTCACCATTGATCAGAACA+AGG	0.635114	6:+15627834	None:intergenic
TTGGAAATTTCACAATGACA+AGG	0.644036	6:-15626954	MsG0680031178.01.T01:CDS
ATACCAAAGAACACATGCCA+TGG	0.644899	6:+15626272	None:intergenic
CTTGTTCTGATCAATGGTGA+AGG	0.651060	6:-15627833	MsG0680031178.01.T01:intron
ATATAAGAGGAAATGAGTGA+GGG	0.651249	6:-15626055	MsG0680031178.01.T01:exon
AAATATGAGAACATGAAGAA+CGG	0.652032	6:-15626019	MsG0680031178.01.T01:three_prime_UTR
AGGGATGCTTGCGTACAAGA+CGG	0.677422	6:-15627065	MsG0680031178.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TTTTAATTTTGTTTCATTTT+TGG	-	Chr6:15626248-15626267	MsG0680031178.01.T01:CDS	10.0%
!!!	TTTTTTGTTTAAATTTAGTT+TGG	-	Chr6:15626673-15626692	MsG0680031178.01.T01:intron	10.0%
!!	AAAAAAAAAAAACCAAATGA+CGG	+	Chr6:15627857-15627876	None:intergenic	15.0%
!!	TTTACTAATTATACCTTAAT+TGG	-	Chr6:15627795-15627814	MsG0680031178.01.T01:intron	15.0%
!!!	AAAAATAGAAAGTACTAATT+TGG	+	Chr6:15628465-15628484	None:intergenic	15.0%
!!!	AATCATATTTTTTCACATAA+AGG	+	Chr6:15627042-15627061	None:intergenic	15.0%
!!!	ATTAGTACTTTCTATTTTTA+AGG	-	Chr6:15628466-15628485	MsG0680031178.01.T01:intron	15.0%
!!!	CATTTTTCAGATAATTTATT+CGG	-	Chr6:15628229-15628248	MsG0680031178.01.T01:intron	15.0%
!!!	TAGTTTTTGTATATTTTGTT+GGG	-	Chr6:15626993-15627012	MsG0680031178.01.T01:CDS	15.0%
!!!	TGTTATTATTCTTTGTTTTT+TGG	-	Chr6:15626136-15626155	MsG0680031178.01.T01:CDS	15.0%
!!!	TTAGTTTTTGTATATTTTGT+TGG	-	Chr6:15626992-15627011	MsG0680031178.01.T01:CDS	15.0%
!!	AATAACAGTTATCAACAAAT+TGG	-	Chr6:15627235-15627254	MsG0680031178.01.T01:intron	20.0%
!!	ATAAAAAAAAAATCTCTACG+AGG	+	Chr6:15626965-15626984	None:intergenic	20.0%
!!!	ATTCTTTGTTTTTTGGTAAT+GGG	-	Chr6:15626143-15626162	MsG0680031178.01.T01:CDS	20.0%
!!!	GAAACAAATGTTTTAAAAAC+TGG	+	Chr6:15628417-15628436	None:intergenic	20.0%
!!!	GAGTGTAAATTTTGATTTTT+AGG	-	Chr6:15626575-15626594	MsG0680031178.01.T01:intron	20.0%
!!!	TATTCTTTGTTTTTTGGTAA+TGG	-	Chr6:15626142-15626161	MsG0680031178.01.T01:CDS	20.0%
!!!	TCGTAGAGATTTTTTTTTTA+TGG	-	Chr6:15626964-15626983	MsG0680031178.01.T01:CDS	20.0%
!!!	TGTTTTTAATTTTTTGGTGT+TGG	-	Chr6:15626189-15626208	MsG0680031178.01.T01:CDS	20.0%
!!!	TTTAACTCTTTTTTTCATCT+GGG	-	Chr6:15626092-15626111	MsG0680031178.01.T01:CDS	20.0%
!!!	TTTTAACTCTTTTTTTCATC+TGG	-	Chr6:15626091-15626110	MsG0680031178.01.T01:CDS	20.0%
!!!	TTTTATTAATCTTTGTAGCA+TGG	-	Chr6:15626333-15626352	MsG0680031178.01.T01:CDS	20.0%
!!!	TTTTTATGGTGATATATGAA+GGG	-	Chr6:15627199-15627218	MsG0680031178.01.T01:intron	20.0%
!!!	TTTTTTTTTTACAATGTGCA+GGG	-	Chr6:15627867-15627886	MsG0680031178.01.T01:intron	20.0%
!!!	TTTTTTTTTTTACAATGTGC+AGG	-	Chr6:15627866-15627885	MsG0680031178.01.T01:intron	20.0%
!	AAAATACCTGAATGAAGAAT+AGG	+	Chr6:15628075-15628094	None:intergenic	25.0%
!	AAATATGAGAACATGAAGAA+CGG	-	Chr6:15628932-15628951	MsG0680031178.01.T01:CDS	25.0%
!	AATAAAGCTGATGATATAAG+AGG	-	Chr6:15628883-15628902	MsG0680031178.01.T01:CDS	25.0%
!	AATACTATGAGAAATCTGAA+TGG	-	Chr6:15627328-15627347	MsG0680031178.01.T01:intron	25.0%
!	ACTTTCAACTCTTGAATTTA+AGG	+	Chr6:15627488-15627507	None:intergenic	25.0%
!	ATACTATGAGAAATCTGAAT+GGG	-	Chr6:15627329-15627348	MsG0680031178.01.T01:intron	25.0%
!	CATATTGAGACAAGAAATTA+TGG	+	Chr6:15626625-15626644	None:intergenic	25.0%
!	TTCAGATTTCTCATAGTATT+TGG	+	Chr6:15627328-15627347	None:intergenic	25.0%
!	TTGAATATGTGAGAATTTGA+AGG	-	Chr6:15626214-15626233	MsG0680031178.01.T01:CDS	25.0%
!	TTGAATGTAAACACATGTAT+CGG	+	Chr6:15626394-15626413	None:intergenic	25.0%
!	TTGCATTACATACAGTTAAA+GGG	+	Chr6:15627305-15627324	None:intergenic	25.0%
!!	AAAACTAAAGAAAGTGTATG+TGG	-	Chr6:15627615-15627634	MsG0680031178.01.T01:intron	25.0%
!!	AGAAAGCAGAGATAATTTTA+GGG	-	Chr6:15627275-15627294	MsG0680031178.01.T01:intron	25.0%
!!	CTTTTTATGGTGATATATGA+AGG	-	Chr6:15627198-15627217	MsG0680031178.01.T01:intron	25.0%
!!	TAGAAAGCAGAGATAATTTT+AGG	-	Chr6:15627274-15627293	MsG0680031178.01.T01:intron	25.0%
!!!	ACTTTCTATTTTTAAGGATC+TGG	-	Chr6:15628472-15628491	MsG0680031178.01.T01:intron	25.0%
!!!	ATTTTAATTGTTGCTTTAGG+TGG	-	Chr6:15628826-15628845	MsG0680031178.01.T01:intron	25.0%
!!!	CAATGTTTTAAAAACTGGAT+TGG	-	Chr6:15628284-15628303	MsG0680031178.01.T01:intron	25.0%
!!!	GCTTTAAAGTGTTAATTTTG+AGG	-	Chr6:15626806-15626825	MsG0680031178.01.T01:intron	25.0%
!!!	TCATCAGCTTTATTATAAGT+CGG	+	Chr6:15628877-15628896	None:intergenic	25.0%
!!!	TCGATCAATGTTTTAAAAAC+TGG	-	Chr6:15628279-15628298	MsG0680031178.01.T01:intron	25.0%
!!!	TTTTGTTTAGCAATAAGAAG+TGG	-	Chr6:15626838-15626857	MsG0680031178.01.T01:intron	25.0%
!!!	TTTTTTCTCAAAGACTAGTT+TGG	-	Chr6:15628507-15628526	MsG0680031178.01.T01:intron	25.0%
	AATCTATGGGAATTGAGAAT+AGG	+	Chr6:15627400-15627419	None:intergenic	30.0%
	ACAATGATGAGAGTCATAAA+TGG	+	Chr6:15627586-15627605	None:intergenic	30.0%
	ACTCTTGAATTTAAGGAGAA+CGG	+	Chr6:15627481-15627500	None:intergenic	30.0%
	ATATAAGAGGAAATGAGTGA+GGG	-	Chr6:15628896-15628915	MsG0680031178.01.T01:CDS	30.0%
	CACATGTTGTAGTATGTATT+TGG	-	Chr6:15626548-15626567	MsG0680031178.01.T01:intron	30.0%
	CACCATAAAAAGTTTCAAAC+AGG	+	Chr6:15627190-15627209	None:intergenic	30.0%
	CGGTACAAATATTTGAAAAG+AGG	+	Chr6:15627708-15627727	None:intergenic	30.0%
	CTGAAAAATGACTAATGTTC+AGG	+	Chr6:15628219-15628238	None:intergenic	30.0%
	CTTTCCTAGATTGCATATAA+TGG	-	Chr6:15627767-15627786	MsG0680031178.01.T01:intron	30.0%
	GAAACCATTATATGCAATCT+AGG	+	Chr6:15627774-15627793	None:intergenic	30.0%
	GAAATACAGCGAAAATCTAT+GGG	+	Chr6:15627413-15627432	None:intergenic	30.0%
	GAGACAAGAAATTATGGTAA+AGG	+	Chr6:15626619-15626638	None:intergenic	30.0%
	GATTTGAATTTCATCTCTTG+AGG	-	Chr6:15626508-15626527	MsG0680031178.01.T01:intron	30.0%
	GTTGCATTACATACAGTTAA+AGG	+	Chr6:15627306-15627325	None:intergenic	30.0%
	GTTGTAAGATGTATTCGATT+AGG	-	Chr6:15628954-15628973	MsG0680031178.01.T01:CDS	30.0%
	TGAAATACAGCGAAAATCTA+TGG	+	Chr6:15627414-15627433	None:intergenic	30.0%
	TGCTAAACTTATCGTAGTTA+AGG	-	Chr6:15626708-15626727	MsG0680031178.01.T01:intron	30.0%
	TGGAAATTTCACAATGACAA+GGG	-	Chr6:15627998-15628017	MsG0680031178.01.T01:intron	30.0%
	TGGTATCTATATCTATGCAT+TGG	-	Chr6:15628696-15628715	MsG0680031178.01.T01:intron	30.0%
	TGTTCAGGCATTTGAAAATT+TGG	+	Chr6:15628204-15628223	None:intergenic	30.0%
	TTGGAAATTTCACAATGACA+AGG	-	Chr6:15627997-15628016	MsG0680031178.01.T01:intron	30.0%
!	AAACTCTAAAGAACCATGAA+AGG	+	Chr6:15627446-15627465	None:intergenic	30.0%
!	ACAACGATTATCACTCTTTT+CGG	+	Chr6:15627728-15627747	None:intergenic	30.0%
!	AGATTTTCGCTGTATTTCAT+CGG	-	Chr6:15627415-15627434	MsG0680031178.01.T01:intron	30.0%
!!	AGCCTGTTTGAAACTTTTTA+TGG	-	Chr6:15627185-15627204	MsG0680031178.01.T01:intron	30.0%
!!	ATATTCCAATGAAGCACTTT+TGG	-	Chr6:15628789-15628808	MsG0680031178.01.T01:intron	30.0%
!!!	GGCATTTTAATTGTTGCTTT+AGG	-	Chr6:15628823-15628842	MsG0680031178.01.T01:intron	30.0%
!!!	TTTTCTGAAGCTTTTAGTTC+CGG	+	Chr6:15627915-15627934	None:intergenic	30.0%
	AATGAAGAATAGGAAAAGGC+AGG	+	Chr6:15628065-15628084	None:intergenic	35.0%
	ATGTGAGAATTTGAAGGCTT+AGG	-	Chr6:15626220-15626239	MsG0680031178.01.T01:CDS	35.0%
	CATTTCTCAGAGACCAAATA+AGG	+	Chr6:15628162-15628181	None:intergenic	35.0%
	CCTGAATGAAGAATAGGAAA+AGG	+	Chr6:15628069-15628088	None:intergenic	35.0%
	CGATACTCACAAACCAATTA+AGG	+	Chr6:15627811-15627830	None:intergenic	35.0%
	GAAAAAGATCGAAAACAACG+CGG	+	Chr6:15627686-15627705	None:intergenic	35.0%
	GAGAAATGCAAAACGTCAAT+CGG	-	Chr6:15628174-15628193	MsG0680031178.01.T01:intron	35.0%
	GATATAAGAGGAAATGAGTG+AGG	-	Chr6:15628895-15628914	MsG0680031178.01.T01:CDS	35.0%
	TCTCTGCAATATTTGTCAGT+TGG	-	Chr6:15628594-15628613	MsG0680031178.01.T01:intron	35.0%
	TGAACACTTGTATTCCATGT+AGG	-	Chr6:15627069-15627088	MsG0680031178.01.T01:intron	35.0%
	TGTGAGAATTTGAAGGCTTA+GGG	-	Chr6:15626221-15626240	MsG0680031178.01.T01:CDS	35.0%
!	CCTTTTCCTATTCTTCATTC+AGG	-	Chr6:15628066-15628085	MsG0680031178.01.T01:intron	35.0%
!	GCTCTCATTTTGAGCTTAAT+TGG	-	Chr6:15627962-15627981	MsG0680031178.01.T01:intron	35.0%
!	TTTGAGCTTAATTGGTCTCT+GGG	-	Chr6:15627970-15627989	MsG0680031178.01.T01:intron	35.0%
!!	AAGCAGAGATAATTTTAGGG+TGG	-	Chr6:15627278-15627297	MsG0680031178.01.T01:intron	35.0%
!!	CTTTAAAGCATGTGAGACTA+CGG	+	Chr6:15626795-15626814	None:intergenic	35.0%
!!	GAAAATACACAGGCCTTATT+TGG	-	Chr6:15628146-15628165	MsG0680031178.01.T01:intron	35.0%
!!	GGTTCTTTAGAGTTTATGCT+TGG	-	Chr6:15627451-15627470	MsG0680031178.01.T01:intron	35.0%
!!	TATTATCAGTGTCGACATGT+TGG	-	Chr6:15626433-15626452	MsG0680031178.01.T01:intron	35.0%
!!	TATTTTCTCGACGACTAGTT+TGG	+	Chr6:15628133-15628152	None:intergenic	35.0%
!!	TTAGGTGGCTTTGTTATTCT+CGG	-	Chr6:15628841-15628860	MsG0680031178.01.T01:intron	35.0%
!!	TTTGCAACATTTTGGTATCC+AGG	-	Chr6:15628625-15628644	MsG0680031178.01.T01:intron	35.0%
!!	TTTTGAGCTTAATTGGTCTC+TGG	-	Chr6:15627969-15627988	MsG0680031178.01.T01:intron	35.0%
!!!	TGCTACTGGTCTTTTAGAAA+AGG	-	Chr6:15628732-15628751	MsG0680031178.01.T01:intron	35.0%
	AAAAACTGGACCAGATCAAC+AGG	+	Chr6:15628403-15628422	None:intergenic	40.0%
	AAAACTGGACCAGATCAACA+GGG	+	Chr6:15628402-15628421	None:intergenic	40.0%
	AAGATCGGGAATTTGACTAC+TGG	+	Chr6:15625943-15625962	None:intergenic	40.0%
	AAGGCTACATTCCTTCAAAC+CGG	-	Chr6:15628751-15628770	MsG0680031178.01.T01:intron	40.0%
	AATATTTGTCAGTTGGCTGC+TGG	-	Chr6:15628601-15628620	MsG0680031178.01.T01:intron	40.0%
	ATACCAAAGAACACATGCCA+TGG	+	Chr6:15628682-15628701	None:intergenic	40.0%
	ATTTCTACAGCCTGCATTCA+TGG	-	Chr6:15628029-15628048	MsG0680031178.01.T01:intron	40.0%
	CGCTACTCTTCTGTTAACAT+GGG	-	Chr6:15625993-15626012	MsG0680031178.01.T01:three_prime_UTR	40.0%
	CTATGAGAAATCTGAATGGG+AGG	-	Chr6:15627332-15627351	MsG0680031178.01.T01:intron	40.0%
	CTTCACCATTGATCAGAACA+AGG	+	Chr6:15627120-15627139	None:intergenic	40.0%
	CTTGTTCTGATCAATGGTGA+AGG	-	Chr6:15627118-15627137	MsG0680031178.01.T01:intron	40.0%
	GAACTAGATTGAACCACAGT+TGG	+	Chr6:15628355-15628374	None:intergenic	40.0%
	GTATTCCATGTAGGTTCATC+CGG	-	Chr6:15627078-15627097	MsG0680031178.01.T01:intron	40.0%
	TAAAAGACCAGTAGCAGTTG+TGG	+	Chr6:15628728-15628747	None:intergenic	40.0%
	TAAGGTCTTTGACCTTTGAG+AGG	-	Chr6:15626726-15626745	MsG0680031178.01.T01:intron	40.0%
	TAGTCGTCGAGAAAATACAC+AGG	-	Chr6:15628136-15628155	MsG0680031178.01.T01:intron	40.0%
	TCGCTACTCTTCTGTTAACA+TGG	-	Chr6:15625992-15626011	MsG0680031178.01.T01:three_prime_UTR	40.0%
	TGATCGAAATAGTACACCTC+AGG	+	Chr6:15628266-15628285	None:intergenic	40.0%
	TTAGTGCTAACTCCGTCATT+TGG	-	Chr6:15627842-15627861	MsG0680031178.01.T01:CDS	40.0%
!	ACATGGGTTGTTCATTTCAG+AGG	-	Chr6:15626009-15626028	MsG0680031178.01.T01:three_prime_UTR	40.0%
!	CTAATTGGTTCAACCAACTG+TGG	-	Chr6:15628339-15628358	MsG0680031178.01.T01:intron	40.0%
!	CTGCTGGATTTGCAACATTT+TGG	-	Chr6:15628617-15628636	MsG0680031178.01.T01:intron	40.0%
!	TAAGAAGTGGTTTGCGCATT+AGG	-	Chr6:15626851-15626870	MsG0680031178.01.T01:intron	40.0%
!!	ATTGGCCTTGTTCTGATCAA+TGG	-	Chr6:15627112-15627131	MsG0680031178.01.T01:intron	40.0%
!!	GCAGAGAGCATTTAGATACA+TGG	+	Chr6:15628581-15628600	None:intergenic	40.0%
!!	GTTGACCAAAAGTGCTTCAT+TGG	+	Chr6:15628797-15628816	None:intergenic	40.0%
!!!	TTCGGACATTTTAGTTCCTG+AGG	-	Chr6:15628247-15628266	MsG0680031178.01.T01:intron	40.0%
	AGAATAGGAAAAGGCAGGCA+AGG	+	Chr6:15628060-15628079	None:intergenic	45.0%
	AGATCGAACCAGTAAGACCT+CGG	-	Chr6:15628307-15628326	MsG0680031178.01.T01:intron	45.0%
	AGTTCACACGAACACGAAGT+TGG	-	Chr6:15626939-15626958	MsG0680031178.01.T01:CDS	45.0%
	ATATCGCGATATGACGTTGC+CGG	+	Chr6:15628773-15628792	None:intergenic	45.0%
	ATCGGGAATTTGACTACTGG+TGG	+	Chr6:15625940-15625959	None:intergenic	45.0%
	ATGCCATGGCATGTGTTCTT+TGG	-	Chr6:15628676-15628695	MsG0680031178.01.T01:intron	45.0%
	CCAATTAGATCATGATCCCG+AGG	+	Chr6:15628327-15628346	None:intergenic	45.0%
	CCTCGGGATCATGATCTAAT+TGG	-	Chr6:15628324-15628343	MsG0680031178.01.T01:intron	45.0%
	TAACCGACACTAACACGTGT+GGG	+	Chr6:15626371-15626390	None:intergenic	45.0%
	TACAGCCTGCATTCATGGTT+AGG	-	Chr6:15628034-15628053	MsG0680031178.01.T01:intron	45.0%
	TATCCCACACGTGTTAGTGT+CGG	-	Chr6:15626365-15626384	MsG0680031178.01.T01:intron	45.0%
	TGGGTTGTTCATTTCAGAGG+AGG	-	Chr6:15626012-15626031	MsG0680031178.01.T01:three_prime_UTR	45.0%
	TTCATCGGTGAAGCCTTTCA+TGG	-	Chr6:15627430-15627449	MsG0680031178.01.T01:intron	45.0%
!	AGCACTTTTGGTCAACTGCT+TGG	-	Chr6:15628801-15628820	MsG0680031178.01.T01:intron	45.0%
!	CTACTATTTCTTGAGCCTCC+TGG	+	Chr6:15628646-15628665	None:intergenic	45.0%
!	GAACTGGTCTGTTCATCTGT+TGG	+	Chr6:15628380-15628399	None:intergenic	45.0%
!	GCACTTTTGGTCAACTGCTT+GGG	-	Chr6:15628802-15628821	MsG0680031178.01.T01:intron	45.0%
!	TTCGCAACAGTGAGAGGTAT+TGG	-	Chr6:15625961-15625980	MsG0680031178.01.T01:three_prime_UTR	45.0%
!!	ATATGACGTTGCCGGTTTGA+AGG	+	Chr6:15628765-15628784	None:intergenic	45.0%
!!	GCAACATTTTGGTATCCAGG+AGG	-	Chr6:15628628-15628647	MsG0680031178.01.T01:intron	45.0%
!!!	ATTTAATGTTTTTAATTTTT+TGG	-	Chr6:15626183-15626202	MsG0680031178.01.T01:CDS	5.0%
	AGACCAGTTCCCTGTTGATC+TGG	-	Chr6:15628390-15628409	MsG0680031178.01.T01:intron	50.0%
	AGGGATGCTTGCGTACAAGA+CGG	-	Chr6:15627886-15627905	MsG0680031178.01.T01:intron	50.0%
	CAAGGCCTAACCATGAATGC+AGG	+	Chr6:15628042-15628061	None:intergenic	50.0%
	CCTAAGCCATGGAGATACCT+TGG	+	Chr6:15626756-15626775	None:intergenic	50.0%
	CCTCTCACTGTTGCGAAGAT+CGG	+	Chr6:15625958-15625977	None:intergenic	50.0%
	CTCCATGGCTTAGGCCTATT+GGG	-	Chr6:15626762-15626781	MsG0680031178.01.T01:intron	50.0%
	CTCTCACTGTTGCGAAGATC+GGG	+	Chr6:15625957-15625976	None:intergenic	50.0%
	CTTGCGTACAAGACGGTATC+CGG	-	Chr6:15627893-15627912	MsG0680031178.01.T01:intron	50.0%
	GATCGAACCAGTAAGACCTC+GGG	-	Chr6:15628308-15628327	MsG0680031178.01.T01:intron	50.0%
	GCTATAGCCACAACTGCTAC+TGG	-	Chr6:15628718-15628737	MsG0680031178.01.T01:intron	50.0%
	GTAACCGACACTAACACGTG+TGG	+	Chr6:15626372-15626391	None:intergenic	50.0%
	GTAGAGTTGCGCTAATGCCA+TGG	-	Chr6:15628662-15628681	MsG0680031178.01.T01:intron	50.0%
	TCATGATCCCGAGGTCTTAC+TGG	+	Chr6:15628318-15628337	None:intergenic	50.0%
	TCTCCATGGCTTAGGCCTAT+TGG	-	Chr6:15626761-15626780	MsG0680031178.01.T01:intron	50.0%
!	CCAAGGTATCTCCATGGCTT+AGG	-	Chr6:15626753-15626772	MsG0680031178.01.T01:intron	50.0%
!	TAATTGGTCTCTGGGCTGCT+TGG	-	Chr6:15627978-15627997	MsG0680031178.01.T01:intron	50.0%
!	TACCTTGGAGCACCTCTCAA+AGG	+	Chr6:15626741-15626760	None:intergenic	50.0%
!	TATGACGTGCTCAGCTCTGA+AGG	-	Chr6:15626463-15626482	MsG0680031178.01.T01:intron	50.0%
!!	ATGACGTGCTCAGCTCTGAA+GGG	-	Chr6:15626464-15626483	MsG0680031178.01.T01:intron	50.0%
	ACTACGGCAACGTGCCCAAT+AGG	+	Chr6:15626779-15626798	None:intergenic	55.0%
	AGGCCAATCACCATCAGCAC+CGG	+	Chr6:15627100-15627119	None:intergenic	55.0%
	CCGATCTTCGCAACAGTGAG+AGG	-	Chr6:15625955-15625974	MsG0680031178.01.T01:three_prime_UTR	55.0%
	GGACCAGATCAACAGGGAAC+TGG	+	Chr6:15628396-15628415	None:intergenic	55.0%
	TGCCCAATAGGCCTAAGCCA+TGG	+	Chr6:15626767-15626786	None:intergenic	55.0%
!	CAGCACCGGATGAACCTACA+TGG	+	Chr6:15627086-15627105	None:intergenic	55.0%
!	GGTGCTCCAAGGTATCTCCA+TGG	-	Chr6:15626747-15626766	MsG0680031178.01.T01:intron	55.0%
!	GTAGGTTCATCCGGTGCTGA+TGG	-	Chr6:15627087-15627106	MsG0680031178.01.T01:intron	55.0%
!!	CATCCGGTGCTGATGGTGAT+TGG	-	Chr6:15627094-15627113	MsG0680031178.01.T01:intron	55.0%
!!	GACCTTTGAGAGGTGCTCCA+AGG	-	Chr6:15626736-15626755	MsG0680031178.01.T01:intron	55.0%

Chromosome	Type	Strat	End	Strand	Name
Chr6	gene	15625928	15629045	15625928	ID=MsG0680031178.01;Name=MsG0680031178.01
Chr6	mRNA	15625928	15629045	15625928	ID=MsG0680031178.01.T01;Parent=MsG0680031178.01;Name=MsG0680031178.01.T01;_AED=0.37;_eAED=0.38;_QI=0\|0.66\|0.75\|1\|0.66\|0.75\|4\|130\|245
Chr6	exon	15625928	15626360	15625928	ID=MsG0680031178.01.T01:exon:10474;Parent=MsG0680031178.01.T01
Chr6	exon	15626886	15627085	15626886	ID=MsG0680031178.01.T01:exon:10473;Parent=MsG0680031178.01.T01
Chr6	exon	15627834	15627882	15627834	ID=MsG0680031178.01.T01:exon:10472;Parent=MsG0680031178.01.T01
Chr6	exon	15628860	15629045	15628860	ID=MsG0680031178.01.T01:exon:10471;Parent=MsG0680031178.01.T01
Chr6	CDS	15628860	15629045	15628860	ID=MsG0680031178.01.T01:cds;Parent=MsG0680031178.01.T01
Chr6	CDS	15627834	15627882	15627834	ID=MsG0680031178.01.T01:cds;Parent=MsG0680031178.01.T01
Chr6	CDS	15626886	15627085	15626886	ID=MsG0680031178.01.T01:cds;Parent=MsG0680031178.01.T01
Chr6	CDS	15626058	15626360	15626058	ID=MsG0680031178.01.T01:cds;Parent=MsG0680031178.01.T01
Chr6	three_prime_UTR	15625928	15626057	15625928	ID=MsG0680031178.01.T01:three_prime_utr;Parent=MsG0680031178.01.T01

Gene Sequence

>MsG0680031178.01.T01

ATGGCGACTCCACCAGTAGTCAAATTCCCGATCTTCGCAACAGTGAGAGGTATTGGAGTTGTGATCGCTACTCTTCTGTTAACATGGGTTGTTCATTTCAGAGGAGGACTCGCTCTTGTTTCTGATGACAAAAATCTCATCTTCAATGTAATCAAGATTATATTTTTAACTCTTTTTTTCATCTGGGTTCATCCGGTGCTGATGGTGATTGGCCTTGTTCTGATCAATGGTGAAGGGATGCTTGCGTACAAGACGGTATCCGGAACTAAAAGCTTCAGAAAATCAGTTCATCTAGCAGCACAGTTTCTTGCTCTCATTTTGAGCTTAATTGGTCTCTGGGCTGCTTGGAAATTTCACAATGACAAGGGCATTGACAATTTCTACAGCCTGCATTCATGGTTAGGCCTTGCCTGCCTTTTCCTATTCTTCATTCAGTTGGCTGCTGGATTTGCAACATTTTGGTATCCAGGAGGCTCAAGAAATAGTAGAGTTGCGCTAATGCCATGGCATGTGTTCTTTGGTATCTATATCTATGCATTGGCTATAGCCACAACTGCTACTGGTCTTTTAGAAAAGGCTACATTCCTTCAAACCGGCAACGTCATATCGCGATATTCCAATGAAGCACTTTTGGTCAACTGCTTGGGCATTTTAATTGTTGCTTTAGGTGGCTTTGTTATTCTCGGTTTAGTTACGCCGACTTATAATAAAGCTGATGATATAAGAGGAAATGAGTGA

Protein sequence

>MsG0680031178.01.T01

MATPPVVKFPIFATVRGIGVVIATLLLTWVVHFRGGLALVSDDKNLIFNVIKIIFLTLFFIWVHPVLMVIGLVLINGEGMLAYKTVSGTKSFRKSVHLAAQFLALILSLIGLWAAWKFHNDKGIDNFYSLHSWLGLACLFLFFIQLAAGFATFWYPGGSRNSRVALMPWHVFFGIYIYALAIATTATGLLEKATFLQTGNVISRYSNEALLVNCLGILIVALGGFVILGLVTPTYNKADDIRGNE*