AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780040160.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040160.01.T01 MTR_7g085500 71.173 392 25 5 9 327 10 386 9.08e-169 489
MsG0780040160.01.T01 MTR_7g085500 66.667 156 3 1 333 439 504 659 2.90e-56 197
MsG0780040160.01.T01 MTR_6g032970 36.939 379 145 11 7 326 11 354 2.28e-36 141
MsG0780040160.01.T01 MTR_6g032970 45.695 151 29 3 333 433 478 625 1.29e-26 113
MsG0780040160.01.T01 MTR_8g088390 83.673 49 8 0 334 382 498 546 9.52e-24 104
MsG0780040160.01.T01 MTR_8g088390 28.900 391 181 12 9 327 10 375 6.92e-20 92.8
MsG0780040160.01.T01 MTR_8g088390 83.673 49 8 0 334 382 433 481 1.07e-23 104
MsG0780040160.01.T01 MTR_8g088390 29.137 278 131 8 109 327 40 310 3.87e-18 87.4
MsG0780040160.01.T01 MTR_2g032660 44.554 101 54 1 334 432 447 547 1.09e-21 98.2
MsG0780040160.01.T01 MTR_4g123630 48.039 102 40 2 334 422 413 514 8.50e-21 95.5
MsG0780040160.01.T01 MTR_4g005110 52.703 74 35 0 333 406 471 544 2.62e-20 94.0
MsG0780040160.01.T01 MTR_2g063460 74.000 50 13 0 334 383 455 504 1.01e-19 92.0
MsG0780040160.01.T01 MTR_2g063460 74.000 50 13 0 334 383 453 502 1.11e-19 92.0
MsG0780040160.01.T01 MTR_2g005840 59.184 49 20 0 334 382 332 380 3.03e-13 71.6
MsG0780040160.01.T01 MTR_2g005840 59.184 49 20 0 334 382 363 411 3.84e-13 71.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040160.01.T01 AT3G03950 88.000 50 6 0 334 383 322 371 1.83e-24 105
MsG0780040160.01.T01 AT3G03950 88.000 50 6 0 334 383 318 367 1.88e-24 105
MsG0780040160.01.T01 AT3G03950 88.000 50 6 0 334 383 319 368 1.89e-24 105
MsG0780040160.01.T01 AT3G13460 42.017 119 57 1 333 439 515 633 1.34e-23 104
MsG0780040160.01.T01 AT3G13460 26.942 412 190 16 5 326 1 391 7.98e-15 77.0
MsG0780040160.01.T01 AT3G13460 42.017 119 57 1 333 439 518 636 1.35e-23 104
MsG0780040160.01.T01 AT3G13460 26.847 406 188 15 9 326 10 394 4.41e-15 78.2
MsG0780040160.01.T01 AT3G13460 42.017 119 57 1 333 439 517 635 1.45e-23 103
MsG0780040160.01.T01 AT3G13460 26.570 414 191 16 5 326 1 393 1.73e-14 76.3
MsG0780040160.01.T01 AT5G61020 42.188 128 50 1 333 436 337 464 1.53e-23 103
MsG0780040160.01.T01 AT5G61020 42.188 128 50 1 333 436 335 462 1.57e-23 103
MsG0780040160.01.T01 AT1G55500 50.000 84 42 0 334 417 491 574 4.41e-22 99.4
MsG0780040160.01.T01 AT1G55500 50.000 84 42 0 334 417 491 574 4.77e-22 99.4
MsG0780040160.01.T01 AT1G55500 50.000 84 42 0 334 417 435 518 4.82e-22 99.0
MsG0780040160.01.T01 AT1G55500 50.000 84 42 0 334 417 448 531 4.93e-22 99.0
MsG0780040160.01.T01 AT1G55500 50.000 84 42 0 334 417 478 561 5.14e-22 99.4
MsG0780040160.01.T01 AT1G55500 50.000 84 42 0 334 417 491 574 5.39e-22 99.4
MsG0780040160.01.T01 AT1G79270 83.673 49 8 0 334 382 387 435 7.05e-22 98.6
MsG0780040160.01.T01 AT1G79270 83.673 49 8 0 334 382 387 435 7.05e-22 98.6
MsG0780040160.01.T01 AT1G79270 83.673 49 8 0 334 382 387 435 7.05e-22 98.6
MsG0780040160.01.T01 AT1G79270 83.673 49 8 0 334 382 402 450 7.22e-22 98.6
MsG0780040160.01.T01 AT3G13060 76.000 50 12 0 333 382 474 523 1.47e-20 94.7
MsG0780040160.01.T01 AT3G13060 76.000 50 12 0 333 382 464 513 1.62e-20 94.7
MsG0780040160.01.T01 AT3G13060 76.000 50 12 0 333 382 452 501 1.65e-20 94.7
MsG0780040160.01.T01 AT3G13060 76.000 50 12 0 333 382 452 501 1.65e-20 94.7
MsG0780040160.01.T01 AT3G13060 63.077 65 22 1 333 397 474 536 1.76e-20 94.4
MsG0780040160.01.T01 AT3G17330 73.469 49 13 0 334 382 249 297 1.86e-20 94.0
MsG0780040160.01.T01 AT3G17330 73.469 49 13 0 334 382 351 399 2.06e-20 94.4
MsG0780040160.01.T01 AT3G17330 73.469 49 13 0 334 382 351 399 2.06e-20 94.4
MsG0780040160.01.T01 AT1G48110 73.469 49 13 0 334 382 402 450 2.14e-20 94.4
MsG0780040160.01.T01 AT1G48110 73.469 49 13 0 334 382 402 450 2.14e-20 94.4
MsG0780040160.01.T01 AT1G27960 48.649 74 38 0 333 406 332 405 1.33e-19 91.3
MsG0780040160.01.T01 AT1G27960 48.649 74 38 0 333 406 406 479 1.93e-19 91.3
MsG0780040160.01.T01 AT5G58190 47.561 82 43 0 335 416 402 483 4.25e-19 90.1
MsG0780040160.01.T01 AT5G58190 47.561 82 43 0 335 416 403 484 4.31e-19 90.1
MsG0780040160.01.T01 AT1G09810 46.575 73 39 0 334 406 270 342 1.59e-17 84.7
MsG0780040160.01.T01 AT3G13460 27.764 407 183 16 9 326 10 394 1.80e-17 85.1
MsG0780040160.01.T01 AT1G09810 46.575 73 39 0 334 406 293 365 2.08e-17 84.7
MsG0780040160.01.T01 AT1G09810 46.575 73 39 0 334 406 312 384 2.24e-17 84.7

Find 138 sgRNAs with CRISPR-Local

Find 330 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCTATTTACAGGGTGTTTA+TGG 0.107201 7:-73833209 MsG0780040160.01.T01:intron
CATATATATTATTAAATTAA+AGG 0.182561 7:+73830600 None:intergenic
TCCATCGAGGTTCACATAAT+TGG 0.214038 7:+73833646 None:intergenic
TACCCTTCTACATATTATTA+TGG 0.241612 7:-73833860 MsG0780040160.01.T01:CDS
GGTGATTGTACAAATCAAAA+TGG 0.241748 7:-73832906 MsG0780040160.01.T01:CDS
TGCTCCATTGTCAGGATATC+AGG 0.245871 7:-73832802 MsG0780040160.01.T01:intron
CCTTCAAATGTTATGAATAA+AGG 0.247263 7:-73832951 MsG0780040160.01.T01:CDS
ACTATTGGAGAGGAGGAATT+TGG 0.249775 7:+73833125 None:intergenic
GTATCCCTGCTATTAGTTAC+AGG 0.256157 7:+73831649 None:intergenic
AACAATTTGTTCAGCCAATA+TGG 0.257623 7:-73832414 MsG0780040160.01.T01:CDS
GAAACCATCCCCATTTCTTC+TGG 0.280993 7:+73832281 None:intergenic
TTTGGAACATAGCTTGGATT+TGG 0.300599 7:+73833887 None:intergenic
TGGTTTCAGTGAGCTAAATA+AGG 0.312720 7:-73832265 MsG0780040160.01.T01:CDS
TTCAGAGCTAATTCTCGTTA+TGG 0.316388 7:-73832384 MsG0780040160.01.T01:CDS
TGGAGAGTTGTAATAAGAAC+AGG 0.317037 7:+73833058 None:intergenic
CCTCCATAATAATATGTAGA+AGG 0.333768 7:+73833857 None:intergenic
TTGATCCATTCCTTTCTAAC+AGG 0.337233 7:+73830856 None:intergenic
TGACCATCATGTTGAACTAT+TGG 0.349153 7:+73833110 None:intergenic
TCAGAGCTAATTCTCGTTAT+GGG 0.354713 7:-73832383 MsG0780040160.01.T01:CDS
GATACGGAAACCAGAGATTA+AGG 0.355407 7:+73833604 None:intergenic
CCTTTATTCATAACATTTGA+AGG 0.361258 7:+73832951 None:intergenic
CTCTGAATGTGCTTCCATAT+TGG 0.368310 7:+73832400 None:intergenic
TGTGAAGTGGCATATCATTA+AGG 0.375415 7:-73831725 MsG0780040160.01.T01:CDS
TACTTCCTGGTTTCATGAAC+GGG 0.375965 7:-73832449 MsG0780040160.01.T01:CDS
TCTGGAATGGAACTACTTCC+TGG 0.385736 7:-73832462 MsG0780040160.01.T01:CDS
TAGCTTGGATTTGGATTGAA+TGG 0.393872 7:+73833896 None:intergenic
ATGTGCCTTAACACACCATT+TGG 0.396675 7:+73831697 None:intergenic
CAACATGATGGTCAGATGTA+TGG 0.399324 7:-73833101 MsG0780040160.01.T01:CDS
TCTATTTACAGGGTGTTTAT+GGG 0.401925 7:-73833208 MsG0780040160.01.T01:intron
CGCTTTATTATCAGAACTCT+TGG 0.402951 7:+73832230 None:intergenic
GTTAAAATTACCTTCTTCAC+TGG 0.403633 7:+73834807 None:intergenic
GCTAACGATTCCAGAAGAAA+TGG 0.405139 7:-73832291 MsG0780040160.01.T01:CDS
TTATTTGCTGATATTTGTCT+TGG 0.411427 7:-73830778 MsG0780040160.01.T01:three_prime_UTR
GTTATGACGGGCAAGGAGAT+TGG 0.421700 7:-73833679 MsG0780040160.01.T01:CDS
CATTTCTCGTTGTGGACCAC+TGG 0.431230 7:+73833001 None:intergenic
TATGTAGAAGGGTATCCATT+TGG 0.438441 7:+73833869 None:intergenic
TTTACTGCAGAATTTGTCTC+TGG 0.439723 7:-73834868 MsG0780040160.01.T01:CDS
CAAGTAAGTACCTTAATCTC+TGG 0.441568 7:-73833614 MsG0780040160.01.T01:CDS
TATCCATTTGGAACATAGCT+TGG 0.442680 7:+73833881 None:intergenic
CTAACGATTCCAGAAGAAAT+GGG 0.443518 7:-73832290 MsG0780040160.01.T01:CDS
AGTAATAAAGTGACCGGTCC+AGG 0.445354 7:+73832197 None:intergenic
CGTTATGGGTCTTCTGCATA+CGG 0.446971 7:-73832369 MsG0780040160.01.T01:CDS
TGTCCCCTTAGCTGCACCAT+TGG 0.451239 7:+73833925 None:intergenic
AAGGCCAGTGATATAACATT+TGG 0.456570 7:-73830969 MsG0780040160.01.T01:CDS
AGCTACTGCAGATGCAGCAC+AGG 0.457344 7:-73830898 MsG0780040160.01.T01:CDS
TTGATAAAACTGTAGAGTAT+TGG 0.458780 7:-73831777 MsG0780040160.01.T01:intron
TTCCATTCCAGATGGATGTC+TGG 0.464762 7:+73832473 None:intergenic
TAGAAGAATCTTCAAATGCT+GGG 0.467118 7:+73830832 None:intergenic
AATCCAAGCTATGTTCCAAA+TGG 0.471316 7:-73833884 MsG0780040160.01.T01:CDS
TTAGAAGAATCTTCAAATGC+TGG 0.480666 7:+73830831 None:intergenic
TCCAATTATGTGAACCTCGA+TGG 0.484174 7:-73833647 MsG0780040160.01.T01:CDS
GCATCTCCAACGATAGTCTT+GGG 0.484717 7:+73834834 None:intergenic
AGCATCTCCAACGATAGTCT+TGG 0.485443 7:+73834833 None:intergenic
TTAATTTAATAATATATATG+TGG 0.487001 7:-73830597 MsG0780040160.01.T01:three_prime_UTR
AGTAGCTGATTCTTTCATCA+AGG 0.488428 7:+73830914 None:intergenic
GATTAATTTCAGGTTATGAC+GGG 0.490922 7:-73833691 MsG0780040160.01.T01:intron
TAGAGTATTGGCAGCAGGAT+AGG 0.491648 7:-73831765 MsG0780040160.01.T01:CDS
AAGTACAGAGCCACAGGTAA+TGG 0.491834 7:-73832321 MsG0780040160.01.T01:CDS
AATCCCTACAGACGTGTCAT+TGG 0.494411 7:-73832746 MsG0780040160.01.T01:intron
TTCATGAACGGGATGTATCC+AGG 0.494530 7:-73832438 MsG0780040160.01.T01:CDS
TTTGCTTAATCACCTTGGTA+TGG 0.497702 7:-73830657 MsG0780040160.01.T01:three_prime_UTR
ATCATTAAGGATATTCCAAA+TGG 0.497885 7:-73831712 MsG0780040160.01.T01:CDS
CAAGGTTGTAGCAAGAGACT+TGG 0.499680 7:+73830932 None:intergenic
TTTGCCAATGGTGCAGCTAA+GGG 0.501275 7:-73833929 MsG0780040160.01.T01:CDS
TGGCTGAACAAATTGTTGCC+TGG 0.504474 7:+73832420 None:intergenic
AACTGTAGAGTATTGGCAGC+AGG 0.506456 7:-73831770 MsG0780040160.01.T01:intron
AATGGTGCAGCTAAGGGGAC+AGG 0.508068 7:-73833923 MsG0780040160.01.T01:CDS
AACTAATAGCAGGGATACTC+AGG 0.510719 7:-73831644 MsG0780040160.01.T01:CDS
TCTGCATACGGATCTAGAAC+AGG 0.511633 7:-73832357 MsG0780040160.01.T01:CDS
ATATTCCAAATGGTGTGTTA+AGG 0.513546 7:-73831702 MsG0780040160.01.T01:CDS
ATTCAGAGGTCCTGTTAGAA+AGG 0.515130 7:-73830866 MsG0780040160.01.T01:CDS
ACAAACCTGTAACTAATAGC+AGG 0.516861 7:-73831654 MsG0780040160.01.T01:CDS
ATAAAGCGCGTCAAAAGTCC+TGG 0.517253 7:-73832215 MsG0780040160.01.T01:CDS
TCTTCTCAGTGCTTTAGTCA+TGG 0.520668 7:-73830709 MsG0780040160.01.T01:three_prime_UTR
TGATTAATTTCAGGTTATGA+CGG 0.522210 7:-73833692 MsG0780040160.01.T01:intron
AATGATCCATCAGCAGAAGT+TGG 0.524552 7:+73833038 None:intergenic
AACTCTCCAACTTCTGCTGA+TGG 0.525703 7:-73833044 MsG0780040160.01.T01:CDS
AATGGTTCCAGACATCCATC+TGG 0.525830 7:-73832480 MsG0780040160.01.T01:CDS
CTACTTCCTGGTTTCATGAA+CGG 0.528282 7:-73832450 MsG0780040160.01.T01:CDS
TATATGTATCACCAAGGCTA+TGG 0.535794 7:-73833174 MsG0780040160.01.T01:CDS
GGTTTCAGTGAGCTAAATAA+GGG 0.537128 7:-73832264 MsG0780040160.01.T01:CDS
CGAGCCAAATGTTATATCAC+TGG 0.539211 7:+73830965 None:intergenic
AGATGCTGAGCCAGTGAAGA+AGG 0.544090 7:-73834817 MsG0780040160.01.T01:intron
GTGATTGTACAAATCAAAAT+GGG 0.544884 7:-73832905 MsG0780040160.01.T01:intron
TGGCAGCAGGATAGGTGGAC+TGG 0.546329 7:-73831757 MsG0780040160.01.T01:CDS
AACTCTGTTAGCATGGTCAA+TGG 0.546862 7:-73832927 MsG0780040160.01.T01:CDS
CTCCATAATAATATGTAGAA+GGG 0.550357 7:+73833858 None:intergenic
TTGGTGAAGCATACGCTCCA+TGG 0.556164 7:+73833144 None:intergenic
GGGTCAAGGTTGAGTACTCA+TGG 0.558328 7:-73832781 MsG0780040160.01.T01:CDS
TGCAGATGCAGCACAGGGGA+AGG 0.560094 7:-73830892 MsG0780040160.01.T01:CDS
GAGGTCCTGTTAGAAAGGAA+TGG 0.560680 7:-73830861 MsG0780040160.01.T01:CDS
CAGTGATATAACATTTGGCT+CGG 0.560767 7:-73830964 MsG0780040160.01.T01:CDS
GATAACAAGTACAGAGCCAC+AGG 0.561687 7:-73832327 MsG0780040160.01.T01:CDS
TTGCAGCTTCTATAGTAGCT+AGG 0.562736 7:+73834892 None:intergenic
TCAGAACTCTTGGCAGCTCT+AGG 0.565264 7:+73832240 None:intergenic
TAAAGGAAACTCTGTTAGCA+TGG 0.566310 7:-73832934 MsG0780040160.01.T01:CDS
TTCCAGACATCCATCTGGAA+TGG 0.573479 7:-73832475 MsG0780040160.01.T01:CDS
ATTTCAGGTTATGACGGGCA+AGG 0.573517 7:-73833686 MsG0780040160.01.T01:intron
TCTCCAATAGTTCAACATGA+TGG 0.574558 7:-73833113 MsG0780040160.01.T01:CDS
GCGCGTCAAAAGTCCTGGAC+CGG 0.577290 7:-73832210 MsG0780040160.01.T01:intron
CAGCAGCCCAAGACTATCGT+TGG 0.577995 7:-73834840 MsG0780040160.01.T01:CDS
CGAACCAATGACACGTCTGT+AGG 0.579345 7:+73832742 None:intergenic
AACATGATGGTCAGATGTAT+GGG 0.580184 7:-73833100 MsG0780040160.01.T01:CDS
TACATCCCGTTCATGAAACC+AGG 0.582289 7:+73832444 None:intergenic
GAACCAATGACACGTCTGTA+GGG 0.582626 7:+73832743 None:intergenic
ATACATTCACATCACAGATA+CGG 0.586544 7:+73833588 None:intergenic
CTTCTATAGTAGCTAGGTCA+AGG 0.586746 7:+73834898 None:intergenic
CCTTCTACATATTATTATGG+AGG 0.590646 7:-73833857 MsG0780040160.01.T01:intron
ATGGTGTGTAGCCATAGCCT+TGG 0.596872 7:+73833163 None:intergenic
AAGGTTGTAGCAAGAGACTT+GGG 0.598797 7:+73830933 None:intergenic
ATGTTGAACTATTGGAGAGG+AGG 0.600088 7:+73833118 None:intergenic
TTGCCAATGGTGCAGCTAAG+GGG 0.600190 7:-73833928 MsG0780040160.01.T01:CDS
AGTATTGGCAGCAGGATAGG+TGG 0.603280 7:-73831762 MsG0780040160.01.T01:CDS
AGAAGAATCTTCAAATGCTG+GGG 0.605229 7:+73830833 None:intergenic
GGAAGTAGTTCCATTCCAGA+TGG 0.605311 7:+73832465 None:intergenic
GCTACTGCAGATGCAGCACA+GGG 0.606043 7:-73830897 MsG0780040160.01.T01:CDS
CTGGTTGCTTTAATGTGAAG+TGG 0.611035 7:-73831738 MsG0780040160.01.T01:CDS
AATTATGTGAACCTCGATGG+AGG 0.612276 7:-73833644 MsG0780040160.01.T01:CDS
TTAATCACCTTGGTATGGAG+TGG 0.612778 7:-73830652 MsG0780040160.01.T01:three_prime_UTR
TTGTCAGGATATCAGGGTCA+AGG 0.613983 7:-73832795 MsG0780040160.01.T01:intron
GCTCCATTGTCAGGATATCA+GGG 0.615553 7:-73832801 MsG0780040160.01.T01:intron
ATTATGTGAACCTCGATGGA+GGG 0.617318 7:-73833643 MsG0780040160.01.T01:CDS
GCAGTTGACATTTCTCGTTG+TGG 0.618461 7:+73832993 None:intergenic
GATTCCAGAAGAAATGGGGA+TGG 0.623548 7:-73832285 MsG0780040160.01.T01:CDS
CAAACCTGTAACTAATAGCA+GGG 0.630259 7:-73831653 MsG0780040160.01.T01:CDS
GGAGAGTTGTAATAAGAACA+GGG 0.633150 7:+73833059 None:intergenic
AATGTCAACTGCTGTTAATG+CGG 0.633445 7:-73832982 MsG0780040160.01.T01:CDS
AAGGCTATGGCTACACACCA+TGG 0.644256 7:-73833161 MsG0780040160.01.T01:CDS
TGCTCTTATATGTATCACCA+AGG 0.657123 7:-73833180 MsG0780040160.01.T01:CDS
GACGGGCAAGGAGATTGGAG+TGG 0.657548 7:-73833674 MsG0780040160.01.T01:CDS
ACAGGGGAAGGTGAATTCAG+AGG 0.661008 7:-73830880 MsG0780040160.01.T01:CDS
ATCATGTTGAACTATTGGAG+AGG 0.681216 7:+73833115 None:intergenic
TAATAGCAGGGATACTCAGG+AGG 0.681467 7:-73831641 MsG0780040160.01.T01:intron
CTTGAGTCATCCCTCCATCG+AGG 0.681479 7:+73833633 None:intergenic
TAACGATTCCAGAAGAAATG+GGG 0.692399 7:-73832289 MsG0780040160.01.T01:CDS
AGCAACATAGCCATTACCTG+TGG 0.696688 7:+73832311 None:intergenic
GTTAACTCCACTCCATACCA+AGG 0.705219 7:+73830645 None:intergenic
CTACTGCAGATGCAGCACAG+GGG 0.780947 7:-73830896 MsG0780040160.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATCAAGATAATATAAAATTA+AGG - Chr7:73830971-73830990 MsG0780040160.01.T01:CDS 10.0%
!!! AAAAAAATACAATTTTTGAT+TGG - Chr7:73830866-73830885 MsG0780040160.01.T01:CDS 10.0%
!!! AAAAAATACAATTTTTGATT+GGG - Chr7:73830867-73830886 MsG0780040160.01.T01:CDS 10.0%
!! AAGATTGTGAATTAATATTT+GGG - Chr7:73831726-73831745 MsG0780040160.01.T01:CDS 15.0%
!! TAAGATTGTGAATTAATATT+TGG - Chr7:73831725-73831744 MsG0780040160.01.T01:CDS 15.0%
!!! AAAAAGTTATATTTGAGTTT+AGG + Chr7:73832970-73832989 None:intergenic 15.0%
!!! AAAAGTTATATTTGAGTTTA+GGG + Chr7:73832969-73832988 None:intergenic 15.0%
!!! AATGTTTTCTAAAATCAAAT+AGG - Chr7:73834349-73834368 MsG0780040160.01.T01:intron 15.0%
!!! ATTGTATTTTTTTTTACTCA+TGG + Chr7:73830859-73830878 None:intergenic 15.0%
!!! CTGTTTAAGTTTTATTTTTA+AGG - Chr7:73831658-73831677 MsG0780040160.01.T01:CDS 15.0%
!! AAAGCATAAAATATAGTGTT+TGG - Chr7:73833455-73833474 MsG0780040160.01.T01:intron 20.0%
!! AAGCATAAAATATAGTGTTT+GGG - Chr7:73833456-73833475 MsG0780040160.01.T01:intron 20.0%
!! ACATAACAACAAAAATCTTA+AGG + Chr7:73831267-73831286 None:intergenic 20.0%
!! CATAACAACAAAAATCTTAA+GGG + Chr7:73831266-73831285 None:intergenic 20.0%
!! CTCATGTTAATACTAAAATA+TGG - Chr7:73831003-73831022 MsG0780040160.01.T01:intron 20.0%
!! GATGCATAAGTATAAAAAAA+TGG + Chr7:73831922-73831941 None:intergenic 20.0%
!! GTTATATAATCCATTTAAGT+TGG - Chr7:73832052-73832071 MsG0780040160.01.T01:intron 20.0%
!! TTTGTTAGCTACAAAATTAA+AGG - Chr7:73831983-73832002 MsG0780040160.01.T01:intron 20.0%
!!! AATCTTAGCATTTTTCTTTT+AGG + Chr7:73831712-73831731 None:intergenic 20.0%
!!! ATTTTTAAAAATCAGGTATC+CGG + Chr7:73831461-73831480 None:intergenic 20.0%
!!! GTCCTATATTTTTGTTATTT+CGG - Chr7:73833535-73833554 MsG0780040160.01.T01:intron 20.0%
!!! TATATTTTTGTTATTTCGGT+GGG - Chr7:73833539-73833558 MsG0780040160.01.T01:intron 20.0%
!!! TCAAATTGTCAAAATTTTCA+AGG - Chr7:73833968-73833987 MsG0780040160.01.T01:intron 20.0%
! AATACTAAAATATGGCTGTT+TGG - Chr7:73831011-73831030 MsG0780040160.01.T01:intron 25.0%
! ATCATTAAGGATATTCCAAA+TGG - Chr7:73833771-73833790 MsG0780040160.01.T01:intron 25.0%
! ATTATTGCTTCTTCAAACTA+AGG - Chr7:73834423-73834442 MsG0780040160.01.T01:intron 25.0%
! ATTGTGAATTAATATTTGGG+CGG - Chr7:73831729-73831748 MsG0780040160.01.T01:CDS 25.0%
! CACCGAAATAACAAAAATAT+AGG + Chr7:73833540-73833559 None:intergenic 25.0%
! CCTTCAAATGTTATGAATAA+AGG - Chr7:73832532-73832551 MsG0780040160.01.T01:intron 25.0%
! CCTTTATTCATAACATTTGA+AGG + Chr7:73832535-73832554 None:intergenic 25.0%
! CTAAAACATCTTATCTTGAA+AGG + Chr7:73830921-73830940 None:intergenic 25.0%
! CTCCATAATAATATGTAGAA+GGG + Chr7:73831628-73831647 None:intergenic 25.0%
! CTGAATAAAGAACAATACAA+TGG - Chr7:73833361-73833380 MsG0780040160.01.T01:intron 25.0%
! GTGATTGTACAAATCAAAAT+GGG - Chr7:73832578-73832597 MsG0780040160.01.T01:intron 25.0%
! TACATATTATTATGGAGGTA+AGG - Chr7:73831631-73831650 MsG0780040160.01.T01:intron 25.0%
! TACCCTTCTACATATTATTA+TGG - Chr7:73831623-73831642 MsG0780040160.01.T01:intron 25.0%
! TGTACGGAAAAAATTGAATT+AGG + Chr7:73833631-73833650 None:intergenic 25.0%
! TTACCAAATGAAACTGTATA+TGG + Chr7:73833567-73833586 None:intergenic 25.0%
! TTATTGCTTCTTCAAACTAA+GGG - Chr7:73834424-73834443 MsG0780040160.01.T01:intron 25.0%
! TTGATAAAACTGTAGAGTAT+TGG - Chr7:73833706-73833725 MsG0780040160.01.T01:intron 25.0%
!! AAATAAGCTTTTATCCAAAG+AGG - Chr7:73831240-73831259 MsG0780040160.01.T01:intron 25.0%
!! AATTTTAAGCAACTTGCAAA+AGG + Chr7:73834406-73834425 None:intergenic 25.0%
!! ACAAGTATATTGGATGATTT+TGG - Chr7:73834005-73834024 MsG0780040160.01.T01:intron 25.0%
!! ATTTTAAGCAACTTGCAAAA+GGG + Chr7:73834405-73834424 None:intergenic 25.0%
!! ATTTTGTTACATGAGCTATT+TGG + Chr7:73831129-73831148 None:intergenic 25.0%
!! CAAGTATATTGGATGATTTT+GGG - Chr7:73834006-73834025 MsG0780040160.01.T01:intron 25.0%
!! CTTTCAAGATAAGATGTTTT+AGG - Chr7:73830919-73830938 MsG0780040160.01.T01:CDS 25.0%
!! TAATTTTTGCTTAATCACCT+TGG - Chr7:73834821-73834840 MsG0780040160.01.T01:CDS 25.0%
!! TTATTTGCTGATATTTGTCT+TGG - Chr7:73834705-73834724 MsG0780040160.01.T01:intron 25.0%
!! TTTTCACAAAAAGTCAAGTT+TGG + Chr7:73830780-73830799 None:intergenic 25.0%
!!! ATTTTTGTTGTTATGTTCGT+TGG - Chr7:73831271-73831290 MsG0780040160.01.T01:intron 25.0%
!!! CTATATTTTTGTTATTTCGG+TGG - Chr7:73833538-73833557 MsG0780040160.01.T01:intron 25.0%
!!! GCATTTTTCTTTTAGGTAAT+CGG + Chr7:73831705-73831724 None:intergenic 25.0%
!!! TAATTCAATTTTTTCCGTAC+AGG - Chr7:73833630-73833649 MsG0780040160.01.T01:CDS 25.0%
!!! TACAGTTTTATCAAAATCAC+CGG + Chr7:73833700-73833719 None:intergenic 25.0%
!!! TCAACTCATTTTTGTTCTTT+TGG - Chr7:73832139-73832158 MsG0780040160.01.T01:intron 25.0%
!!! TGATTAATTTCAGGTTATGA+CGG - Chr7:73831791-73831810 MsG0780040160.01.T01:intron 25.0%
AAACACCCTGTAAATAGATT+CGG + Chr7:73832273-73832292 None:intergenic 30.0%
AAATTTCCTTGCTCAAAAAC+AGG - Chr7:73834486-73834505 MsG0780040160.01.T01:intron 30.0%
AACTCTCAACATATACAACA+CGG + Chr7:73832035-73832054 None:intergenic 30.0%
AATACAAGGGATTCTTATCA+AGG - Chr7:73832640-73832659 MsG0780040160.01.T01:intron 30.0%
AATCTTTGATATTTGCCACT+TGG + Chr7:73832807-73832826 None:intergenic 30.0%
ACATAAGCATCTAGTTGAAA+GGG + Chr7:73833913-73833932 None:intergenic 30.0%
ATACAAGGGATTCTTATCAA+GGG - Chr7:73832641-73832660 MsG0780040160.01.T01:intron 30.0%
ATACATTCACATCACAGATA+CGG + Chr7:73831898-73831917 None:intergenic 30.0%
ATATTCCAAATGGTGTGTTA+AGG - Chr7:73833781-73833800 MsG0780040160.01.T01:intron 30.0%
ATCTTTGACAAAAGAAACAG+TGG + Chr7:73834247-73834266 None:intergenic 30.0%
CCTCCATAATAATATGTAGA+AGG + Chr7:73831629-73831648 None:intergenic 30.0%
CCTTCTACATATTATTATGG+AGG - Chr7:73831626-73831645 MsG0780040160.01.T01:intron 30.0%
GAATAACATACCATGAATTG+TGG + Chr7:73832868-73832887 None:intergenic 30.0%
GGTGATTGTACAAATCAAAA+TGG - Chr7:73832577-73832596 MsG0780040160.01.T01:intron 30.0%
GTACAAATCAAGGTAAAACA+AGG - Chr7:73834289-73834308 MsG0780040160.01.T01:intron 30.0%
GTTAAAATTACCTTCTTCAC+TGG + Chr7:73830679-73830698 None:intergenic 30.0%
TAAATTCAAAACAGCTACAC+TGG + Chr7:73832082-73832101 None:intergenic 30.0%
TACATAAGCATCTAGTTGAA+AGG + Chr7:73833914-73833933 None:intergenic 30.0%
TAGAAGAATCTTCAAATGCT+GGG + Chr7:73834654-73834673 None:intergenic 30.0%
TCAAAGATTTCTCATCTCAA+AGG - Chr7:73832818-73832837 MsG0780040160.01.T01:intron 30.0%
TCATCTATTTGTATGCAGAA+TGG - Chr7:73831524-73831543 MsG0780040160.01.T01:intron 30.0%
TGCAAGCAAAACAAGTATAT+TGG - Chr7:73833995-73834014 MsG0780040160.01.T01:intron 30.0%
TTAGAAGAATCTTCAAATGC+TGG + Chr7:73834655-73834674 None:intergenic 30.0%
TTATGTATATGTCATTCTGC+AGG - Chr7:73833927-73833946 MsG0780040160.01.T01:CDS 30.0%
! AACAATTTGTTCAGCCAATA+TGG - Chr7:73833069-73833088 MsG0780040160.01.T01:CDS 30.0%
! ATCTATTTACAGGGTGTTTA+TGG - Chr7:73832274-73832293 MsG0780040160.01.T01:CDS 30.0%
! CTTTTGTCAAAGATATTTGC+TGG - Chr7:73834253-73834272 MsG0780040160.01.T01:intron 30.0%
! GATGATGAAAAATTTTGCGT+CGG + Chr7:73833407-73833426 None:intergenic 30.0%
! TCTATTTACAGGGTGTTTAT+GGG - Chr7:73832275-73832294 MsG0780040160.01.T01:CDS 30.0%
! TTTTTGTTGCAGAACTTGAA+TGG - Chr7:73832985-73833004 MsG0780040160.01.T01:CDS 30.0%
!! GATTAATTTCAGGTTATGAC+GGG - Chr7:73831792-73831811 MsG0780040160.01.T01:intron 30.0%
!! TACAAATCAAAATGGGTTGA+AGG - Chr7:73832585-73832604 MsG0780040160.01.T01:intron 30.0%
!! TTGGTGATGTGATTAATTTC+AGG - Chr7:73831782-73831801 MsG0780040160.01.T01:intron 30.0%
!! TTTTTACTCATGGTTCTACA+TGG + Chr7:73830849-73830868 None:intergenic 30.0%
AAAAATCTTAAGGGCCTCTT+TGG + Chr7:73831257-73831276 None:intergenic 35.0%
AAACATGAGCAGCATCAATA+AGG + Chr7:73830701-73830720 None:intergenic 35.0%
AACATGATGGTCAGATGTAT+GGG - Chr7:73832383-73832402 MsG0780040160.01.T01:CDS 35.0%
AAGGCCAGTGATATAACATT+TGG - Chr7:73834514-73834533 MsG0780040160.01.T01:intron 35.0%
AATCCAAGCTATGTTCCAAA+TGG - Chr7:73831599-73831618 MsG0780040160.01.T01:intron 35.0%
AATGTCAACTGCTGTTAATG+CGG - Chr7:73832501-73832520 MsG0780040160.01.T01:intron 35.0%
ACAAACCTGTAACTAATAGC+AGG - Chr7:73833829-73833848 MsG0780040160.01.T01:intron 35.0%
AGAAGAATCTTCAAATGCTG+GGG + Chr7:73834653-73834672 None:intergenic 35.0%
AGCACACATCTTTGAATACA+AGG - Chr7:73832626-73832645 MsG0780040160.01.T01:intron 35.0%
AGCATTTATCAAGTGGTTAG+AGG + Chr7:73832243-73832262 None:intergenic 35.0%
ATCATGTTGAACTATTGGAG+AGG + Chr7:73832371-73832390 None:intergenic 35.0%
CAAACCTGTAACTAATAGCA+GGG - Chr7:73833830-73833849 MsG0780040160.01.T01:intron 35.0%
CAAGTAAGTACCTTAATCTC+TGG - Chr7:73831869-73831888 MsG0780040160.01.T01:intron 35.0%
CACTCAGGAGAGAAAATTTA+AGG - Chr7:73834052-73834071 MsG0780040160.01.T01:intron 35.0%
CAGTGATATAACATTTGGCT+CGG - Chr7:73834519-73834538 MsG0780040160.01.T01:intron 35.0%
CCTTTGAGTAATAAAGTGAC+CGG + Chr7:73833295-73833314 None:intergenic 35.0%
CTAACGATTCCAGAAGAAAT+GGG - Chr7:73833193-73833212 MsG0780040160.01.T01:CDS 35.0%
CTGTTGTTGTGTACAAATCA+AGG - Chr7:73834279-73834298 MsG0780040160.01.T01:intron 35.0%
GCACACATCTTTGAATACAA+GGG - Chr7:73832627-73832646 MsG0780040160.01.T01:intron 35.0%
GGAGAGTTGTAATAAGAACA+GGG + Chr7:73832427-73832446 None:intergenic 35.0%
GGTTTCAGTGAGCTAAATAA+GGG - Chr7:73833219-73833238 MsG0780040160.01.T01:intron 35.0%
GTGCCATATACAGTTTCATT+TGG - Chr7:73833561-73833580 MsG0780040160.01.T01:intron 35.0%
GTTCTTTATTCAGAACCAGA+GGG + Chr7:73833354-73833373 None:intergenic 35.0%
TAAAGGAAACTCTGTTAGCA+TGG - Chr7:73832549-73832568 MsG0780040160.01.T01:intron 35.0%
TAACGATTCCAGAAGAAATG+GGG - Chr7:73833194-73833213 MsG0780040160.01.T01:CDS 35.0%
TAGCTTGGATTTGGATTGAA+TGG + Chr7:73831590-73831609 None:intergenic 35.0%
TATATGTATCACCAAGGCTA+TGG - Chr7:73832309-73832328 MsG0780040160.01.T01:CDS 35.0%
TCAGAGCTAATTCTCGTTAT+GGG - Chr7:73833100-73833119 MsG0780040160.01.T01:CDS 35.0%
TCTCCAATAGTTCAACATGA+TGG - Chr7:73832370-73832389 MsG0780040160.01.T01:CDS 35.0%
TGACCATCATGTTGAACTAT+TGG + Chr7:73832376-73832395 None:intergenic 35.0%
TGATTACACAACAGTAATCG+TGG + Chr7:73830955-73830974 None:intergenic 35.0%
TGCTCTTATATGTATCACCA+AGG - Chr7:73832303-73832322 MsG0780040160.01.T01:CDS 35.0%
TGGAGAGTTGTAATAAGAAC+AGG + Chr7:73832428-73832447 None:intergenic 35.0%
TGGTTTCAGTGAGCTAAATA+AGG - Chr7:73833218-73833237 MsG0780040160.01.T01:intron 35.0%
TGTATTCAAAGATGTGTGCT+GGG + Chr7:73832626-73832645 None:intergenic 35.0%
TGTGAAGTGGCATATCATTA+AGG - Chr7:73833758-73833777 MsG0780040160.01.T01:intron 35.0%
TGTTCTTTATTCAGAACCAG+AGG + Chr7:73833355-73833374 None:intergenic 35.0%
TTACATAACTTCTCCCAAAC+AGG + Chr7:73831078-73831097 None:intergenic 35.0%
TTCAGAGCTAATTCTCGTTA+TGG - Chr7:73833099-73833118 MsG0780040160.01.T01:CDS 35.0%
TTGAAATGTAAGAGCTTGTG+TGG - Chr7:73834155-73834174 MsG0780040160.01.T01:intron 35.0%
TTGATCCATTCCTTTCTAAC+AGG + Chr7:73834630-73834649 None:intergenic 35.0%
TTGTATTCAAAGATGTGTGC+TGG + Chr7:73832627-73832646 None:intergenic 35.0%
TTTACTGCAGAATTTGTCTC+TGG - Chr7:73830615-73830634 MsG0780040160.01.T01:three_prime_UTR 35.0%
TTTGCTTAATCACCTTGGTA+TGG - Chr7:73834826-73834845 MsG0780040160.01.T01:CDS 35.0%
! CGCTTTATTATCAGAACTCT+TGG + Chr7:73833256-73833275 None:intergenic 35.0%
! CGGTCACTTTATTACTCAAA+GGG - Chr7:73833293-73833312 MsG0780040160.01.T01:intron 35.0%
! CTTAAATTTTCTCTCCTGAG+TGG + Chr7:73834054-73834073 None:intergenic 35.0%
! TAGACAACTGTTACCTGTTT+TGG + Chr7:73834089-73834108 None:intergenic 35.0%
! TATCCATTTGGAACATAGCT+TGG + Chr7:73831605-73831624 None:intergenic 35.0%
! TTTGGAACATAGCTTGGATT+TGG + Chr7:73831599-73831618 None:intergenic 35.0%
!! AAGAAAGTACCACCATCAAA+TGG + Chr7:73831960-73831979 None:intergenic 35.0%
!! ATAAGTTTTGTGAGCCTGTT+TGG - Chr7:73831061-73831080 MsG0780040160.01.T01:intron 35.0%
!! CAGGAAAAGCATTTATCAAG+TGG + Chr7:73832250-73832269 None:intergenic 35.0%
!! GGCTTTATTATTATCCGTTC+TGG - Chr7:73831750-73831769 MsG0780040160.01.T01:CDS 35.0%
!! TAAGTTTTGTGAGCCTGTTT+GGG - Chr7:73831062-73831081 MsG0780040160.01.T01:intron 35.0%
!! TATGTAGAAGGGTATCCATT+TGG + Chr7:73831617-73831636 None:intergenic 35.0%
!! TTTGGTGTTTCTGTTCTACT+AGG - Chr7:73832157-73832176 MsG0780040160.01.T01:intron 35.0%
!! TTTGTTGTTATGTTCGTTGG+TGG - Chr7:73831274-73831293 MsG0780040160.01.T01:intron 35.0%
!!! ACCAAGTCATTTTTCCAGAA+CGG + Chr7:73831767-73831786 None:intergenic 35.0%
!!! GTGCTTTGTTCTTTGTTTTC+TGG - Chr7:73834741-73834760 MsG0780040160.01.T01:intron 35.0%
!!! TGCTGCTCATGTTTTTAAGT+TGG - Chr7:73830707-73830726 MsG0780040160.01.T01:three_prime_UTR 35.0%
AACACTAGCGGTCAATTTGT+TGG - Chr7:73833655-73833674 MsG0780040160.01.T01:CDS 40.0%
AACTAATAGCAGGGATACTC+AGG - Chr7:73833839-73833858 MsG0780040160.01.T01:intron 40.0%
AACTCTGTTAGCATGGTCAA+TGG - Chr7:73832556-73832575 MsG0780040160.01.T01:intron 40.0%
AAGGTTGTAGCAAGAGACTT+GGG + Chr7:73834553-73834572 None:intergenic 40.0%
AATGATCCATCAGCAGAAGT+TGG + Chr7:73832448-73832467 None:intergenic 40.0%
AATTATGTGAACCTCGATGG+AGG - Chr7:73831839-73831858 MsG0780040160.01.T01:intron 40.0%
ACTATTGGAGAGGAGGAATT+TGG + Chr7:73832361-73832380 None:intergenic 40.0%
AGGTTGGATTATCTTCCAAG+TGG - Chr7:73832789-73832808 MsG0780040160.01.T01:CDS 40.0%
ATGTGCCTTAACACACCATT+TGG + Chr7:73833789-73833808 None:intergenic 40.0%
ATGTTGAACTATTGGAGAGG+AGG + Chr7:73832368-73832387 None:intergenic 40.0%
ATTATGTGAACCTCGATGGA+GGG - Chr7:73831840-73831859 MsG0780040160.01.T01:intron 40.0%
ATTCAGAGGTCCTGTTAGAA+AGG - Chr7:73834617-73834636 MsG0780040160.01.T01:intron 40.0%
CAACATGATGGTCAGATGTA+TGG - Chr7:73832382-73832401 MsG0780040160.01.T01:CDS 40.0%
CATACCATGAATTGTGGAAG+TGG + Chr7:73832862-73832881 None:intergenic 40.0%
CATCATCAAATCCTATAGCG+AGG - Chr7:73833420-73833439 MsG0780040160.01.T01:intron 40.0%
CCAAAAAAAGCGAACTAAGC+AGG + Chr7:73834133-73834152 None:intergenic 40.0%
CGAGCCAAATGTTATATCAC+TGG + Chr7:73834521-73834540 None:intergenic 40.0%
CTACTTCCTGGTTTCATGAA+CGG - Chr7:73833033-73833052 MsG0780040160.01.T01:CDS 40.0%
CTCTGAATGTGCTTCCATAT+TGG + Chr7:73833086-73833105 None:intergenic 40.0%
CTTCTATAGTAGCTAGGTCA+AGG + Chr7:73830588-73830607 None:intergenic 40.0%
GAGCCTTACTCTGCTTTAAT+CGG - Chr7:73831384-73831403 MsG0780040160.01.T01:intron 40.0%
GATACGGAAACCAGAGATTA+AGG + Chr7:73831882-73831901 None:intergenic 40.0%
GCTAACGATTCCAGAAGAAA+TGG - Chr7:73833192-73833211 MsG0780040160.01.T01:CDS 40.0%
GTATCCCTGCTATTAGTTAC+AGG + Chr7:73833837-73833856 None:intergenic 40.0%
TACTTCCTGGTTTCATGAAC+GGG - Chr7:73833034-73833053 MsG0780040160.01.T01:CDS 40.0%
TCCAATTATGTGAACCTCGA+TGG - Chr7:73831836-73831855 MsG0780040160.01.T01:intron 40.0%
TCCATCGAGGTTCACATAAT+TGG + Chr7:73831840-73831859 None:intergenic 40.0%
TCCTGCCGAATCTATTTACA+GGG - Chr7:73832265-73832284 MsG0780040160.01.T01:CDS 40.0%
TCTGCAGGTTAAGTTTGAGA+GGG - Chr7:73833942-73833961 MsG0780040160.01.T01:CDS 40.0%
TCTTCTCAGTGCTTTAGTCA+TGG - Chr7:73834774-73834793 MsG0780040160.01.T01:intron 40.0%
TGCTCAAAAACAGGTCAACA+AGG - Chr7:73834495-73834514 MsG0780040160.01.T01:intron 40.0%
TGTAAGAGCTTGTGTGGTAT+TGG - Chr7:73834161-73834180 MsG0780040160.01.T01:intron 40.0%
TTAATCACCTTGGTATGGAG+TGG - Chr7:73834831-73834850 MsG0780040160.01.T01:CDS 40.0%
TTCCTGCCGAATCTATTTAC+AGG - Chr7:73832264-73832283 MsG0780040160.01.T01:CDS 40.0%
TTCTGCAGGTTAAGTTTGAG+AGG - Chr7:73833941-73833960 MsG0780040160.01.T01:CDS 40.0%
TTCTGCGAAGAACCATTTGA+TGG - Chr7:73831945-73831964 MsG0780040160.01.T01:intron 40.0%
TTGCAGCTTCTATAGTAGCT+AGG + Chr7:73830594-73830613 None:intergenic 40.0%
TTTGCTCCGAAAAAAACCAG+TGG - Chr7:73832466-73832485 MsG0780040160.01.T01:CDS 40.0%
! AGTTTGGTGAGCCTTAAAAG+AGG + Chr7:73830764-73830783 None:intergenic 40.0%
! CACTGGTCTACCAACTTAAA+TGG + Chr7:73832065-73832084 None:intergenic 40.0%
! CATGGTCTTGAAACGTGTTT+AGG - Chr7:73830734-73830753 MsG0780040160.01.T01:three_prime_UTR 40.0%
! CCGGTCACTTTATTACTCAA+AGG - Chr7:73833292-73833311 MsG0780040160.01.T01:intron 40.0%
! CTGGTTGCTTTAATGTGAAG+TGG - Chr7:73833745-73833764 MsG0780040160.01.T01:intron 40.0%
! GTTTAGGCATGCCTCTTTTA+AGG - Chr7:73830750-73830769 MsG0780040160.01.T01:three_prime_UTR 40.0%
!! TCCGTTCTGGAAAAATGACT+TGG - Chr7:73831763-73831782 MsG0780040160.01.T01:CDS 40.0%
!!! AATGGACCTGTTTTTGCCAA+TGG - Chr7:73831542-73831561 MsG0780040160.01.T01:intron 40.0%
!!! CCTGCTTAGTTCGCTTTTTT+TGG - Chr7:73834130-73834149 MsG0780040160.01.T01:intron 40.0%
!!! CTACATGGCTTTGGCTTTTT+AGG + Chr7:73830834-73830853 None:intergenic 40.0%
!!! GCTCATGTTTTTAAGTTGGC+TGG - Chr7:73830711-73830730 MsG0780040160.01.T01:three_prime_UTR 40.0%
!!! GTTACCTGTTTTGGTAACTG+CGG + Chr7:73834080-73834099 None:intergenic 40.0%
!!! TGTGGACCACTGGTTTTTTT+CGG + Chr7:73832475-73832494 None:intergenic 40.0%
!!! TGTTGACCTGTTTTTGAGCA+AGG + Chr7:73834495-73834514 None:intergenic 40.0%
!!! TGTTTTTAAGTTGGCTGGCA+TGG - Chr7:73830716-73830735 MsG0780040160.01.T01:three_prime_UTR 40.0%
AAAGCTGGATGCTGCATATC+AGG - Chr7:73833500-73833519 MsG0780040160.01.T01:intron 45.0%
AACTCTCCAACTTCTGCTGA+TGG - Chr7:73832439-73832458 MsG0780040160.01.T01:CDS 45.0%
AAGCAGAGTAAGGCTCTCAA+TGG + Chr7:73831380-73831399 None:intergenic 45.0%
AAGTACAGAGCCACAGGTAA+TGG - Chr7:73833162-73833181 MsG0780040160.01.T01:CDS 45.0%
AATCCCTACAGACGTGTCAT+TGG - Chr7:73832737-73832756 MsG0780040160.01.T01:intron 45.0%
AATGGTTCCAGACATCCATC+TGG - Chr7:73833003-73833022 MsG0780040160.01.T01:CDS 45.0%
ACAGTCCAAACATGGAGGAA+AGG - Chr7:73832769-73832788 MsG0780040160.01.T01:CDS 45.0%
ACCCTGTAAATAGATTCGGC+AGG + Chr7:73832269-73832288 None:intergenic 45.0%
ACTTCGTCATCACTCTTCAC+TGG + Chr7:73833328-73833347 None:intergenic 45.0%
AGCAACATAGCCATTACCTG+TGG + Chr7:73833175-73833194 None:intergenic 45.0%
AGCATCTCCAACGATAGTCT+TGG + Chr7:73830653-73830672 None:intergenic 45.0%
AGCCCACAAAAAGTGGCATT+GGG + Chr7:73831354-73831373 None:intergenic 45.0%
AGTAATAAAGTGACCGGTCC+AGG + Chr7:73833289-73833308 None:intergenic 45.0%
ATAAAGCGCGTCAAAAGTCC+TGG - Chr7:73833268-73833287 MsG0780040160.01.T01:intron 45.0%
ATGAACATCGTCCTCGCTAT+AGG + Chr7:73833434-73833453 None:intergenic 45.0%
CAAGGTTGTAGCAAGAGACT+TGG + Chr7:73834554-73834573 None:intergenic 45.0%
CATTGGGAGGATTCAAACCT+GGG + Chr7:73831338-73831357 None:intergenic 45.0%
CGTTATGGGTCTTCTGCATA+CGG - Chr7:73833114-73833133 MsG0780040160.01.T01:CDS 45.0%
GAAACCATCCCCATTTCTTC+TGG + Chr7:73833205-73833224 None:intergenic 45.0%
GAACCAATGACACGTCTGTA+GGG + Chr7:73832743-73832762 None:intergenic 45.0%
GAGGTCCTGTTAGAAAGGAA+TGG - Chr7:73834622-73834641 MsG0780040160.01.T01:intron 45.0%
GATAACAAGTACAGAGCCAC+AGG - Chr7:73833156-73833175 MsG0780040160.01.T01:CDS 45.0%
GATAGACAGTCCAAACATGG+AGG - Chr7:73832764-73832783 MsG0780040160.01.T01:CDS 45.0%
GATTCCAGAAGAAATGGGGA+TGG - Chr7:73833198-73833217 MsG0780040160.01.T01:CDS 45.0%
GCACAGTTGCACTTCGAAAA+AGG + Chr7:73832897-73832916 None:intergenic 45.0%
GCAGTTGACATTTCTCGTTG+TGG + Chr7:73832493-73832512 None:intergenic 45.0%
GCATCTCCAACGATAGTCTT+GGG + Chr7:73830652-73830671 None:intergenic 45.0%
GCTCCATTGTCAGGATATCA+GGG - Chr7:73832682-73832701 MsG0780040160.01.T01:intron 45.0%
GGAAGTAGTTCCATTCCAGA+TGG + Chr7:73833021-73833040 None:intergenic 45.0%
GGTCCGATTAAAGCAGAGTA+AGG + Chr7:73831390-73831409 None:intergenic 45.0%
GTTAACTCCACTCCATACCA+AGG + Chr7:73834841-73834860 None:intergenic 45.0%
TAATAGCAGGGATACTCAGG+AGG - Chr7:73833842-73833861 MsG0780040160.01.T01:intron 45.0%
TACATCCCGTTCATGAAACC+AGG + Chr7:73833042-73833061 None:intergenic 45.0%
TAGCCCACAAAAAGTGGCAT+TGG + Chr7:73831355-73831374 None:intergenic 45.0%
TCAGCCACTTCCACAATTCA+TGG - Chr7:73832855-73832874 MsG0780040160.01.T01:intron 45.0%
TCCAAACATGGAGGAAAGGT+TGG - Chr7:73832773-73832792 MsG0780040160.01.T01:CDS 45.0%
TCCAACCTTTCCTCCATGTT+TGG + Chr7:73832777-73832796 None:intergenic 45.0%
TCGGATAGACAGTCCAAACA+TGG - Chr7:73832761-73832780 MsG0780040160.01.T01:CDS 45.0%
TGACCCTGATATCCTGACAA+TGG + Chr7:73832688-73832707 None:intergenic 45.0%
TGCGAAGAACCATTTGATGG+TGG - Chr7:73831948-73831967 MsG0780040160.01.T01:intron 45.0%
TGCTCCATTGTCAGGATATC+AGG - Chr7:73832681-73832700 MsG0780040160.01.T01:intron 45.0%
TGGCTGAACAAATTGTTGCC+TGG + Chr7:73833066-73833085 None:intergenic 45.0%
TTCATGAACGGGATGTATCC+AGG - Chr7:73833045-73833064 MsG0780040160.01.T01:CDS 45.0%
TTCCAGACATCCATCTGGAA+TGG - Chr7:73833008-73833027 MsG0780040160.01.T01:CDS 45.0%
TTCCATTCCAGATGGATGTC+TGG + Chr7:73833013-73833032 None:intergenic 45.0%
TTGTCAGGATATCAGGGTCA+AGG - Chr7:73832688-73832707 MsG0780040160.01.T01:intron 45.0%
TTTGCCAATGGTGCAGCTAA+GGG - Chr7:73831554-73831573 MsG0780040160.01.T01:intron 45.0%
! ATCCAGCTTTTTGTTGCCGT+TGG + Chr7:73833490-73833509 None:intergenic 45.0%
! CTACAGACGTGTCATTGGTT+CGG - Chr7:73832742-73832761 MsG0780040160.01.T01:intron 45.0%
! CTCATGGTTCTACATGGCTT+TGG + Chr7:73830843-73830862 None:intergenic 45.0%
! GTTGGTTTAGCTGAGATGAC+TGG - Chr7:73833673-73833692 MsG0780040160.01.T01:CDS 45.0%
! TCTGCATACGGATCTAGAAC+AGG - Chr7:73833126-73833145 MsG0780040160.01.T01:CDS 45.0%
! TCTGGAATGGAACTACTTCC+TGG - Chr7:73833021-73833040 MsG0780040160.01.T01:CDS 45.0%
! TTTAGCTGAGATGACTGGTC+CGG - Chr7:73833678-73833697 MsG0780040160.01.T01:CDS 45.0%
! TTTTGCCAATGGTGCAGCTA+AGG - Chr7:73831553-73831572 MsG0780040160.01.T01:intron 45.0%
!! AACTGTAGAGTATTGGCAGC+AGG - Chr7:73833713-73833732 MsG0780040160.01.T01:intron 45.0%
!! ATGGACTAGCCCACAAAAAG+TGG + Chr7:73831361-73831380 None:intergenic 45.0%
!! ATTTCAGGTTATGACGGGCA+AGG - Chr7:73831797-73831816 MsG0780040160.01.T01:intron 45.0%
!! TAGAGTATTGGCAGCAGGAT+AGG - Chr7:73833718-73833737 MsG0780040160.01.T01:intron 45.0%
!!! CTCCCAATGCCACTTTTTGT+GGG - Chr7:73831349-73831368 MsG0780040160.01.T01:intron 45.0%
!! CATATATATTATTAAATTAA+AGG + Chr7:73834886-73834905 None:intergenic 5.0%
!! TTAATTTAATAATATATATG+TGG - Chr7:73834886-73834905 MsG0780040160.01.T01:CDS 5.0%
!!! GATTTTTAAAAATAAAAAAA+AGG - Chr7:73831468-73831487 MsG0780040160.01.T01:intron 5.0%
!!! TTTTTTTATTTTTAAAAATC+AGG + Chr7:73831468-73831487 None:intergenic 5.0%
AAGGCTATGGCTACACACCA+TGG - Chr7:73832322-73832341 MsG0780040160.01.T01:CDS 50.0%
ACAGGGGAAGGTGAATTCAG+AGG - Chr7:73834603-73834622 MsG0780040160.01.T01:intron 50.0%
AGATGCTGAGCCAGTGAAGA+AGG - Chr7:73830666-73830685 MsG0780040160.01.T01:three_prime_UTR 50.0%
ATGGTGTGTAGCCATAGCCT+TGG + Chr7:73832323-73832342 None:intergenic 50.0%
CATTTCTCGTTGTGGACCAC+TGG + Chr7:73832485-73832504 None:intergenic 50.0%
CGAACCAATGACACGTCTGT+AGG + Chr7:73832744-73832763 None:intergenic 50.0%
CGTCATCACTCTTCACTGGA+AGG + Chr7:73833324-73833343 None:intergenic 50.0%
CTCCAACGGCAACAAAAAGC+TGG - Chr7:73833485-73833504 MsG0780040160.01.T01:intron 50.0%
GATGCTGCATATCAGGAAGC+TGG - Chr7:73833507-73833526 MsG0780040160.01.T01:intron 50.0%
GCATTGGGAGGATTCAAACC+TGG + Chr7:73831339-73831358 None:intergenic 50.0%
GCTGCACCATTGGCAAAAAC+AGG + Chr7:73831551-73831570 None:intergenic 50.0%
GGATTGATCCCCAGATTGGT+CGG - Chr7:73831427-73831446 MsG0780040160.01.T01:intron 50.0%
GGGTCAAGGTTGAGTACTCA+TGG - Chr7:73832702-73832721 MsG0780040160.01.T01:intron 50.0%
GTCCAATGACCGACCAATCT+GGG + Chr7:73831439-73831458 None:intergenic 50.0%
TCAGAACTCTTGGCAGCTCT+AGG + Chr7:73833246-73833265 None:intergenic 50.0%
TCCAATGACCGACCAATCTG+GGG + Chr7:73831438-73831457 None:intergenic 50.0%
TCCGTACAGGTCAACACTAG+CGG - Chr7:73833643-73833662 MsG0780040160.01.T01:CDS 50.0%
TGTTTGGGCAAGCACTCCAA+CGG - Chr7:73833471-73833490 MsG0780040160.01.T01:intron 50.0%
TTCAAACCTGGGACCTTGAG+AGG + Chr7:73831327-73831346 None:intergenic 50.0%
TTGCCAATGGTGCAGCTAAG+GGG - Chr7:73831555-73831574 MsG0780040160.01.T01:intron 50.0%
TTGGTGAAGCATACGCTCCA+TGG + Chr7:73832342-73832361 None:intergenic 50.0%
TTTAATCGGACCCCCACTAC+TGG - Chr7:73831398-73831417 MsG0780040160.01.T01:intron 50.0%
! AGATTGGTCGGTCATTGGAC+CGG - Chr7:73831439-73831458 MsG0780040160.01.T01:intron 50.0%
! CCACAAAAAGTGGCATTGGG+AGG + Chr7:73831351-73831370 None:intergenic 50.0%
! TCTCCTGAGTGGTCTTTTCG+CGG + Chr7:73834043-73834062 None:intergenic 50.0%
! TGATGACGAAGTAGTCCCTC+TGG - Chr7:73833336-73833355 MsG0780040160.01.T01:intron 50.0%
!! ACCGCTAGTGTTGACCTGTA+CGG + Chr7:73833647-73833666 None:intergenic 50.0%
!! AGTATTGGCAGCAGGATAGG+TGG - Chr7:73833721-73833740 MsG0780040160.01.T01:intron 50.0%
!! GTTATGACGGGCAAGGAGAT+TGG - Chr7:73831804-73831823 MsG0780040160.01.T01:intron 50.0%
!!! CCTCCCAATGCCACTTTTTG+TGG - Chr7:73831348-73831367 MsG0780040160.01.T01:intron 50.0%
AATCCCACCGTCCAGTAGTG+GGG + Chr7:73831412-73831431 None:intergenic 55.0%
AATGGTGCAGCTAAGGGGAC+AGG - Chr7:73831560-73831579 MsG0780040160.01.T01:intron 55.0%
AGCTACTGCAGATGCAGCAC+AGG - Chr7:73834585-73834604 MsG0780040160.01.T01:intron 55.0%
CAATCCCACCGTCCAGTAGT+GGG + Chr7:73831413-73831432 None:intergenic 55.0%
CAGCAGCCCAAGACTATCGT+TGG - Chr7:73830643-73830662 MsG0780040160.01.T01:three_prime_UTR 55.0%
CCAGCTTGTGCTCCATTGTC+AGG - Chr7:73832673-73832692 MsG0780040160.01.T01:intron 55.0%
CCTGACAATGGAGCACAAGC+TGG + Chr7:73832676-73832695 None:intergenic 55.0%
CTACTGCAGATGCAGCACAG+GGG - Chr7:73834587-73834606 MsG0780040160.01.T01:intron 55.0%
CTTCGAGTGTGCTCCTCTCA+AGG - Chr7:73831311-73831330 MsG0780040160.01.T01:intron 55.0%
CTTGAGTCATCCCTCCATCG+AGG + Chr7:73831853-73831872 None:intergenic 55.0%
GCTACTGCAGATGCAGCACA+GGG - Chr7:73834586-73834605 MsG0780040160.01.T01:intron 55.0%
GCTGCATATCAGGAAGCTGG+TGG - Chr7:73833510-73833529 MsG0780040160.01.T01:intron 55.0%
GGAGCCGCAGTTACCAAAAC+AGG - Chr7:73834073-73834092 MsG0780040160.01.T01:intron 55.0%
GGTCCAATGACCGACCAATC+TGG + Chr7:73831440-73831459 None:intergenic 55.0%
GGTGGGATTGATCCCCAGAT+TGG - Chr7:73831423-73831442 MsG0780040160.01.T01:intron 55.0%
TCAATCCCACCGTCCAGTAG+TGG + Chr7:73831414-73831433 None:intergenic 55.0%
TGTCCCCTTAGCTGCACCAT+TGG + Chr7:73831561-73831580 None:intergenic 55.0%
! CTCCTGAGTGGTCTTTTCGC+GGG + Chr7:73834042-73834061 None:intergenic 55.0%
! CTTGAGAGGAGCACACTCGA+AGG + Chr7:73831313-73831332 None:intergenic 55.0%
! TCCCCAGATTGGTCGGTCAT+TGG - Chr7:73831434-73831453 MsG0780040160.01.T01:intron 55.0%
ATCCCACCGTCCAGTAGTGG+GGG + Chr7:73831411-73831430 None:intergenic 60.0%
ATCGGACCCCCACTACTGGA+CGG - Chr7:73831402-73831421 MsG0780040160.01.T01:intron 60.0%
GACGGGCAAGGAGATTGGAG+TGG - Chr7:73831809-73831828 MsG0780040160.01.T01:intron 60.0%
GCGCGTCAAAAGTCCTGGAC+CGG - Chr7:73833273-73833292 MsG0780040160.01.T01:intron 60.0%
GGAGCACACTCGAAGGTCTC+TGG + Chr7:73831306-73831325 None:intergenic 60.0%
GTCCCGCGAAAAGACCACTC+AGG - Chr7:73834037-73834056 MsG0780040160.01.T01:intron 60.0%
TGCAGATGCAGCACAGGGGA+AGG - Chr7:73834591-73834610 MsG0780040160.01.T01:intron 60.0%
TGGCAGCAGGATAGGTGGAC+TGG - Chr7:73833726-73833745 MsG0780040160.01.T01:intron 60.0%
TGTGCTCCTCTCAAGGTCCC+AGG - Chr7:73831318-73831337 MsG0780040160.01.T01:intron 60.0%
GACCCCCACTACTGGACGGT+GGG - Chr7:73831406-73831425 MsG0780040160.01.T01:intron 65.0%
GGACCCCCACTACTGGACGG+TGG - Chr7:73831405-73831424 MsG0780040160.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr7 gene 73830580 73834925 73830580 ID=MsG0780040160.01;Name=MsG0780040160.01
Chr7 mRNA 73830580 73834925 73830580 ID=MsG0780040160.01.T01;Parent=MsG0780040160.01;Name=MsG0780040160.01.T01;_AED=0.49;_eAED=0.51;_QI=0|0.28|0.25|1|0.85|0.87|8|241|439
Chr7 exon 73830580 73830997 73830580 ID=MsG0780040160.01.T01:exon:13325;Parent=MsG0780040160.01.T01
Chr7 exon 73831642 73831784 73831642 ID=MsG0780040160.01.T01:exon:13324;Parent=MsG0780040160.01.T01
Chr7 exon 73832211 73832508 73832211 ID=MsG0780040160.01.T01:exon:13323;Parent=MsG0780040160.01.T01
Chr7 exon 73832747 73832810 73832747 ID=MsG0780040160.01.T01:exon:13322;Parent=MsG0780040160.01.T01
Chr7 exon 73832906 73833219 73832906 ID=MsG0780040160.01.T01:exon:13321;Parent=MsG0780040160.01.T01
Chr7 exon 73833592 73833701 73833592 ID=MsG0780040160.01.T01:exon:13320;Parent=MsG0780040160.01.T01
Chr7 exon 73833858 73833963 73833858 ID=MsG0780040160.01.T01:exon:13319;Parent=MsG0780040160.01.T01
Chr7 exon 73834818 73834925 73834818 ID=MsG0780040160.01.T01:exon:13318;Parent=MsG0780040160.01.T01
Chr7 CDS 73834818 73834925 73834818 ID=MsG0780040160.01.T01:cds;Parent=MsG0780040160.01.T01
Chr7 CDS 73833858 73833963 73833858 ID=MsG0780040160.01.T01:cds;Parent=MsG0780040160.01.T01
Chr7 CDS 73833592 73833701 73833592 ID=MsG0780040160.01.T01:cds;Parent=MsG0780040160.01.T01
Chr7 CDS 73832906 73833219 73832906 ID=MsG0780040160.01.T01:cds;Parent=MsG0780040160.01.T01
Chr7 CDS 73832747 73832810 73832747 ID=MsG0780040160.01.T01:cds;Parent=MsG0780040160.01.T01
Chr7 CDS 73832211 73832508 73832211 ID=MsG0780040160.01.T01:cds;Parent=MsG0780040160.01.T01
Chr7 CDS 73831642 73831784 73831642 ID=MsG0780040160.01.T01:cds;Parent=MsG0780040160.01.T01
Chr7 CDS 73830821 73830997 73830821 ID=MsG0780040160.01.T01:cds;Parent=MsG0780040160.01.T01
Chr7 three_prime_UTR 73830580 73830820 73830580 ID=MsG0780040160.01.T01:three_prime_utr;Parent=MsG0780040160.01.T01
Gene Sequence

>MsG0780040160.01.T01

TTTTTCCTTGACCTAGCTACTATAGAAGCTGCAAGTTTACTGCAGAATTTGTCTCTGGATTCGCAGCAGCCCAAGACTATCGTTGGAGATGCTGAGCCAGTGAAGAAGAATGGACCTGTTTTTGCCAATGGTGCAGCTAAGGGGACAGGCAAGCCATTCAATCCAAATCCAAGCTATGTTCCAAATGGATACCCTTCTACATATTATTATGGAGGTTATGACGGGCAAGGAGATTGGAGTGGTTATTCCAATTATGTGAACCTCGATGGAGGGATGACTCAAGTAAGTACCTTAATCTCTGGTTTCCGTATCTGTGATGTGAATGGTGTTTATGGGATAACTGCTCTTATATGTATCACCAAGGCTATGGCTACACACCATGGAGCGTATGCTTCACCAAATTCCTCCTCTCCAATAGTTCAACATGATGGTCAGATGTATGGGCTGCAACAGTATCAGTATCCCTGTTCTTATTACAACTCTCCAACTTCTGCTGATGGATCATTTGCTCCGAAAAAAACCAGTGGTCCACAACGAGAAATGTCAACTGCTGTTAATGCGGATCGTATTCCTTCAAATGTTATGAATAAAGGAAACTCTGTTAGCATGGTCAATGGTGATTGTACAAATCAAAATGGGATATCAGGGTCAAGGTTGAGTACTCATGGTGCACAGTCAGCAATCCCTACAGACGTGTCATTGAACTTGAATGGTTCCAGACATCCATCTGGAATGGAACTACTTCCTGGTTTCATGAACGGGATGTATCCAGGCAACAATTTGTTCAGCCAATATGGAAGCACATTCAGAGCTAATTCTCGTTATGGGTCTTCTGCATACGGATCTAGAACAGGTTCTTTTGATAACAAGTACAGAGCCACAGGTAATGGCTATGTTGCTAACGATTCCAGAAGAAATGGGGATGGTTTCAGTGAGCTAAATAAGGGACCTAGAGCTGCCAAGAGTTCTGATAATAAAGCGCGTCAAAAGTCCTGGACCGAGTATTGGCAGCAGGATAGGTGGACTGGTTGCTTTAATGTGAAGTGGCATATCATTAAGGATATTCCAAATGGTGTGTTAAGGCACATAACACTAGAAAACAATGAAAACAAACCTGTAACTAATAGCAGGGATACTCAGGAGGTCAACAAGGCCAGTGATATAACATTTGGCTCGGTTACATTACCCAAGTCTCTTGCTACAACCTTGATGAAAGAATCAGCTACTGCAGATGCAGCACAGGGGAAGGTGAATTCAGAGGTCCTGTTAGAAAGGAATGGATCAACCCCAGCATTTGAAGATTCTTCTAAGAGCAGTTAA

Protein sequence

>MsG0780040160.01.T01

FFLDLATIEAASLLQNLSLDSQQPKTIVGDAEPVKKNGPVFANGAAKGTGKPFNPNPSYVPNGYPSTYYYGGYDGQGDWSGYSNYVNLDGGMTQVSTLISGFRICDVNGVYGITALICITKAMATHHGAYASPNSSSPIVQHDGQMYGLQQYQYPCSYYNSPTSADGSFAPKKTSGPQREMSTAVNADRIPSNVMNKGNSVSMVNGDCTNQNGISGSRLSTHGAQSAIPTDVSLNLNGSRHPSGMELLPGFMNGMYPGNNLFSQYGSTFRANSRYGSSAYGSRTGSFDNKYRATGNGYVANDSRRNGDGFSELNKGPRAAKSSDNKARQKSWTEYWQQDRWTGCFNVKWHIIKDIPNGVLRHITLENNENKPVTNSRDTQEVNKASDITFGSVTLPKSLATTLMKESATADAAQGKVNSEVLLERNGSTPAFEDSSKSS*