AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180001113.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180001113.01.T01 MTR_1g030890 99.839 621 1 0 1 621 1 621 0.0 1275
MsG0180001113.01.T01 MTR_1g030890 99.808 522 1 0 1 522 1 522 0.0 1078
MsG0180001113.01.T01 MTR_4g084870 77.877 669 90 15 1 621 1 659 0.0 975
MsG0180001113.01.T01 MTR_6g069510 63.281 640 180 13 1 621 1 604 0.0 759
MsG0180001113.01.T01 MTR_7g089360 63.323 638 170 14 1 621 1 591 0.0 736
MsG0180001113.01.T01 MTR_4g127100 58.779 655 206 12 1 621 1 625 0.0 713
MsG0180001113.01.T01 MTR_7g089360 61.859 624 174 14 1 607 1 577 0.0 700
MsG0180001113.01.T01 MTR_8g107360 60.890 629 133 14 1 621 1 524 0.0 692
MsG0180001113.01.T01 MTR_4g127090 53.175 630 223 12 1 621 1 567 0.0 601
MsG0180001113.01.T01 MTR_4g127100 54.480 558 190 12 1 524 1 528 0.0 543
MsG0180001113.01.T01 MTR_1g029190 47.943 632 213 19 1 621 1 527 2.81e-166 485
MsG0180001113.01.T01 MTR_2g038470 49.402 251 102 5 1 248 1 229 3.86e-74 246
MsG0180001113.01.T01 MTR_2g038470 46.862 239 107 3 401 621 273 509 1.08e-63 219
MsG0180001113.01.T01 MTR_7g009370 67.089 158 52 0 464 621 200 357 3.30e-65 218
MsG0180001113.01.T01 MTR_7g009370 55.696 158 70 0 1 158 1 158 2.74e-52 184
MsG0180001113.01.T01 MTR_6g011400 63.190 163 58 1 461 621 199 361 1.05e-62 212
MsG0180001113.01.T01 MTR_6g011400 56.329 158 68 1 1 157 1 158 8.55e-51 180
MsG0180001113.01.T01 MTR_7g079720 53.289 152 71 0 468 619 208 359 1.44e-51 182
MsG0180001113.01.T01 MTR_7g079720 51.613 155 75 0 1 155 1 155 4.33e-47 170
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180001113.01.T01 AT1G70940 74.923 646 131 13 1 621 1 640 0.0 908
MsG0180001113.01.T01 AT2G01420 74.725 637 120 14 1 621 1 612 0.0 900
MsG0180001113.01.T01 AT2G01420 74.411 637 126 13 1 621 1 616 0.0 892
MsG0180001113.01.T01 AT1G23080 73.585 636 136 12 1 621 1 619 0.0 891
MsG0180001113.01.T01 AT1G23080 72.956 636 136 11 1 621 1 615 0.0 884
MsG0180001113.01.T01 AT1G23080 72.956 636 136 11 1 621 1 615 0.0 884
MsG0180001113.01.T01 AT1G23080 70.391 537 123 11 1 522 1 516 0.0 722
MsG0180001113.01.T01 AT5G57090 58.471 667 211 11 1 621 1 647 0.0 720
MsG0180001113.01.T01 AT2G01420 72.305 538 112 13 1 522 1 517 0.0 719
MsG0180001113.01.T01 AT1G73590 59.538 650 206 12 1 621 1 622 0.0 706
MsG0180001113.01.T01 AT5G57090 55.556 567 186 11 101 621 1 547 0.0 555
MsG0180001113.01.T01 AT1G77110 48.413 630 256 15 1 621 1 570 2.98e-180 523
MsG0180001113.01.T01 AT1G77110 47.697 608 249 15 1 599 1 548 1.06e-167 489
MsG0180001113.01.T01 AT5G15100 62.805 164 61 0 458 621 204 367 8.26e-61 207
MsG0180001113.01.T01 AT5G15100 49.153 177 80 2 1 172 1 172 1.05e-44 163
MsG0180001113.01.T01 AT5G16530 54.000 150 69 0 467 616 195 344 7.24e-51 179
MsG0180001113.01.T01 AT5G16530 52.229 157 75 0 1 157 1 157 1.05e-49 176
MsG0180001113.01.T01 AT5G16530 52.229 157 75 0 1 157 1 157 3.19e-50 177
MsG0180001113.01.T01 AT5G16530 51.825 137 66 0 464 600 192 328 3.17e-43 158

Find 221 sgRNAs with CRISPR-Local

Find 377 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAACCAAGACATTCCAATTT+TGG 0.071341 1:-16167888 MsG0180001113.01.T01:CDS
GGCTTCCATTGTTTCCTTTA+AGG 0.137518 1:-16168144 MsG0180001113.01.T01:CDS
ACAATGGAAGCCGCGGTTTC+TGG 0.173798 1:+16168155 None:intergenic
ACTCATTCTGTGCAAAATTT+TGG 0.176459 1:+16168829 None:intergenic
TTGAATTGCAGGGTTATATT+TGG 0.190580 1:-16164361 MsG0180001113.01.T01:intron
ATTATATTTAGGTCTGTTTA+TGG 0.191838 1:-16165489 MsG0180001113.01.T01:intron
CAAGTCTCATTGGTCTTATT+TGG 0.200411 1:-16166802 MsG0180001113.01.T01:CDS
TAATAGAAAATGAAGGAAAA+TGG 0.213317 1:+16168750 None:intergenic
ATTGCCTATACCTTTGTTAT+TGG 0.219936 1:+16167470 None:intergenic
CCGCGACTCCGGTGGCTTTA+GGG 0.226606 1:+16166924 None:intergenic
TCCGCGACTCCGGTGGCTTT+AGG 0.232306 1:+16166923 None:intergenic
CTTCGGATTGTTCCGAATTT+CGG 0.239748 1:+16167550 None:intergenic
AATCTGAAGTTCATTTGATA+TGG 0.240310 1:+16168461 None:intergenic
CATGATAATAATAGGTAAAA+AGG 0.253119 1:+16163831 None:intergenic
TGCTAGTAGCACTTTCATTA+TGG 0.257436 1:-16168406 MsG0180001113.01.T01:CDS
TCATCTTGGAATTTCTAATA+TGG 0.257757 1:+16164057 None:intergenic
CTCAAGTGCTTCACCGGTTT+CGG 0.261627 1:-16167595 MsG0180001113.01.T01:CDS
CAAATCATTAGCCCCAAAAT+TGG 0.264008 1:+16167875 None:intergenic
CCTTCAAATTTCGAAGAAAA+TGG 0.266779 1:-16167813 MsG0180001113.01.T01:CDS
CTTCCTAACACTTTGGTTAT+GGG 0.267472 1:-16168323 MsG0180001113.01.T01:CDS
ACTTCCTAACACTTTGGTTA+TGG 0.272014 1:-16168324 MsG0180001113.01.T01:CDS
AACATCCGAATCGACCTTAA+AGG 0.272674 1:+16168130 None:intergenic
ATGTAGTAGAGTAGAGTAAT+TGG 0.282953 1:+16164322 None:intergenic
GACACGTCTCATACTCATTA+TGG 0.285664 1:-16166861 MsG0180001113.01.T01:CDS
TGGTTCTTCAGTGTATTATT+TGG 0.294698 1:-16168241 MsG0180001113.01.T01:CDS
ACAATAATCATGATAATAAT+AGG 0.297965 1:+16163823 None:intergenic
ATATGGAGACATTAGCATTA+TGG 0.309373 1:+16164074 None:intergenic
TTGAATAAGTGTTTGGATTA+CGG 0.310783 1:+16166822 None:intergenic
TTAGTAGTAGAGGAGAATTC+CGG 0.312645 1:+16167720 None:intergenic
TGATTATTCAGGTAGCTTAA+TGG 0.316996 1:-16168273 MsG0180001113.01.T01:CDS
TTTGGTCCCTTGTTGCCTTT+AGG 0.319465 1:-16166784 MsG0180001113.01.T01:intron
GCTATGTATGGTGATTATTC+AGG 0.323216 1:-16168284 MsG0180001113.01.T01:CDS
CCTTACTGGTCCAGCAGTTA+TGG 0.341147 1:-16165402 MsG0180001113.01.T01:CDS
GAATTCGAGCCCAACTTGTT+AGG 0.341677 1:+16166962 None:intergenic
TTCTCACCGGATCAATGTTC+CGG 0.355844 1:-16168551 MsG0180001113.01.T01:CDS
ATGAGACTTGAATAAGTGTT+TGG 0.358805 1:+16166815 None:intergenic
TCGGATGTTATGTCGTTAGA+TGG 0.360086 1:-16168116 MsG0180001113.01.T01:CDS
AAGATCATAGCAACATATAA+TGG 0.361273 1:+16168605 None:intergenic
TATGGAGACATTAGCATTAT+GGG 0.368773 1:+16164075 None:intergenic
TTATGTAGAGGAAAAGAAAT+TGG 0.368887 1:-16163868 MsG0180001113.01.T01:three_prime_UTR
ATTCCCACATGCAATGATCT+TGG 0.369808 1:+16165457 None:intergenic
AGAGAGCATGTAACATTGTA+AGG 0.373238 1:-16164012 MsG0180001113.01.T01:three_prime_UTR
CCTCAATGTCTTCCGAAATT+CGG 0.379629 1:-16167562 MsG0180001113.01.T01:CDS
GGAAGTTACATGTTACTGTT+AGG 0.381177 1:-16168052 MsG0180001113.01.T01:CDS
AGTTAGTTAACTAGGAGTAT+AGG 0.384939 1:+16168791 None:intergenic
TTTGGCACCGGATACGAATT+AGG 0.387532 1:+16167744 None:intergenic
TATACAAATGGTTGATAGAA+AGG 0.388340 1:+16163921 None:intergenic
AACACTTATTCAAGTCTCAT+TGG 0.389053 1:-16166812 MsG0180001113.01.T01:CDS
GGTGGTCAAGAAAAGGAAAT+TGG 0.389811 1:-16167049 MsG0180001113.01.T01:CDS
GCTGATGAACATAATCAAAA+TGG 0.390186 1:-16167498 MsG0180001113.01.T01:CDS
CTATCTTCCAAAGTATGAAT+AGG 0.391219 1:+16164278 None:intergenic
TTCATATAAAATTATACAAA+TGG 0.391462 1:+16163909 None:intergenic
CCTTGAAAATTACATCATCT+TGG 0.393042 1:+16164043 None:intergenic
ATACTGTCTGATGCTGGTCT+TGG 0.394410 1:-16166532 MsG0180001113.01.T01:CDS
AATAGAAAATGAAGGAAAAT+GGG 0.398762 1:+16168751 None:intergenic
GCCCAACTTGTTAGGTCCAT+TGG 0.399378 1:+16166970 None:intergenic
GGTGCAAGTTCTCCTAGATT+CGG 0.403944 1:-16167792 MsG0180001113.01.T01:CDS
CCTACATGTAGCTATTGTTC+AGG 0.405283 1:-16165342 MsG0180001113.01.T01:intron
GTCTCATACTCATTATGGTT+TGG 0.406117 1:-16166856 MsG0180001113.01.T01:CDS
ATTCCCATAACCAAAGTGTT+AGG 0.414160 1:+16168320 None:intergenic
AAGACCAGCATCAGACAGTA+TGG 0.415534 1:+16166534 None:intergenic
ATGGCTATAAGATTCCTTAC+TGG 0.418097 1:-16165416 MsG0180001113.01.T01:CDS
CTACTCTACTACATTCTCCT+TGG 0.419596 1:-16164313 MsG0180001113.01.T01:CDS
GTAGAGGAGAATTCCGGGTT+TGG 0.423859 1:+16167726 None:intergenic
AGGCCAGCACTTTCCGAAAC+CGG 0.423867 1:+16167582 None:intergenic
TGTTTCCTTTAAGGTCGATT+CGG 0.427917 1:-16168135 MsG0180001113.01.T01:CDS
GGTTGAAATTAGACCCTCTT+GGG 0.428239 1:+16167940 None:intergenic
GCCGGATAAAACCCGAATCT+AGG 0.429616 1:+16167780 None:intergenic
TAGTAGTAGAGGAGAATTCC+GGG 0.437495 1:+16167721 None:intergenic
GTGCAAGTTCTCCTAGATTC+GGG 0.439036 1:-16167791 MsG0180001113.01.T01:CDS
TTCTGTTGCTTCATTTGCCA+TGG 0.440626 1:-16165435 MsG0180001113.01.T01:CDS
GCCCCAAAATTGGAATGTCT+TGG 0.443621 1:+16167885 None:intergenic
TTCCCACATGCAATGATCTT+GGG 0.445777 1:+16165458 None:intergenic
ATTGCAGACAAAAGGTTCTC+AGG 0.450066 1:-16167646 MsG0180001113.01.T01:CDS
AGTCAAATTATATCTAGAAA+TGG 0.450786 1:-16163947 MsG0180001113.01.T01:three_prime_UTR
TTAGGCACAGTTTGCGCTGC+CGG 0.451420 1:+16167762 None:intergenic
TCTTCGAAATTTGAAGGTCT+AGG 0.454518 1:+16167819 None:intergenic
AAGGAAAATGGGAAAGAAAA+CGG 0.454640 1:+16168762 None:intergenic
CCTTTGTTAATTGCTATGTA+TGG 0.454996 1:-16168296 MsG0180001113.01.T01:CDS
AGGGTCTAATTTCAACCATC+AGG 0.456670 1:-16167934 MsG0180001113.01.T01:CDS
AAGGTGTGTCAGAGAAAGTA+GGG 0.458240 1:+16168926 None:intergenic
CCCAACTTGTTAGGTCCATT+GGG 0.459861 1:+16166971 None:intergenic
CAGGTTCAATTGCAGACAAA+AGG 0.466019 1:-16167654 MsG0180001113.01.T01:CDS
GAAGGTGTGTCAGAGAAAGT+AGG 0.466090 1:+16168925 None:intergenic
AAGAGGACTTCAAGTTCAAT+GGG 0.468366 1:-16167021 MsG0180001113.01.T01:CDS
TCACCGGTTTCGGAAAGTGC+TGG 0.470039 1:-16167585 MsG0180001113.01.T01:CDS
CCTACGGTTCGGTCCGTTGG+TGG 0.474399 1:-16168580 MsG0180001113.01.T01:CDS
ATCAACACTTCCTAACACTT+TGG 0.475928 1:-16168330 MsG0180001113.01.T01:CDS
TGCTTACGCTGTACTAAGAA+TGG 0.477801 1:+16164482 None:intergenic
CTTCACAGGTTTAGTAGTAG+AGG 0.477907 1:+16167710 None:intergenic
GGAATGGCTATGTTTAGCTT+AGG 0.479154 1:-16166511 MsG0180001113.01.T01:intron
TTCGTATCCGGTGCCAAACC+CGG 0.479487 1:-16167739 MsG0180001113.01.T01:CDS
TAGCCTACGGTTCGGTCCGT+TGG 0.480227 1:-16168583 MsG0180001113.01.T01:CDS
GATCTCCTTAGCACCCTCTT+CGG 0.482409 1:+16167533 None:intergenic
TAGCTTAATGGTTCAAGTTG+TGG 0.483646 1:-16168261 MsG0180001113.01.T01:CDS
AAAGGAAATTGGTGGGGAAG+AGG 0.484370 1:-16167038 MsG0180001113.01.T01:CDS
GTTCATTTGATATGGATTGT+TGG 0.488470 1:+16168469 None:intergenic
AACTGTGCCTAATTCGTATC+CGG 0.489229 1:-16167751 MsG0180001113.01.T01:CDS
CCGAATTTCGGAAGACATTG+AGG 0.489492 1:+16167562 None:intergenic
GGTTGGTTAGTTAGTTAACT+AGG 0.491382 1:+16168783 None:intergenic
AATTGAAGGTGGTCAAGAAA+AGG 0.491402 1:-16167056 MsG0180001113.01.T01:intron
CCCAATGGACCTAACAAGTT+GGG 0.493053 1:-16166971 MsG0180001113.01.T01:CDS
AAGAGGGTGCTAAGGAGATC+AGG 0.493248 1:-16167530 MsG0180001113.01.T01:CDS
GTGGAGCTCAAGTGCTTCAC+CGG 0.493646 1:-16167601 MsG0180001113.01.T01:CDS
AGGAGTACTTGTAATAGTAC+TGG 0.495170 1:+16168864 None:intergenic
GAAGAGGACTTCAAGTTCAA+TGG 0.495292 1:-16167022 MsG0180001113.01.T01:CDS
GATGCATCAGTTGGTGATGA+TGG 0.503763 1:-16168074 MsG0180001113.01.T01:CDS
GTTGAATGGCATGTGAAGAA+AGG 0.505360 1:+16168708 None:intergenic
CTTGAAACTGATGCATCAGT+TGG 0.511837 1:-16168083 MsG0180001113.01.T01:CDS
TCAGCTCCAGTCAAATTTGA+CGG 0.512431 1:+16167984 None:intergenic
CGCGACAAAACGGTTTATAC+CGG 0.513768 1:+16168532 None:intergenic
AAATTTGAAGGTCTAGGAGT+TGG 0.515304 1:+16167825 None:intergenic
TACGCTGTACTAAGAATGGC+TGG 0.515311 1:+16164486 None:intergenic
ATACAAATGGTTGATAGAAA+GGG 0.515594 1:+16163922 None:intergenic
GAAGCTGCTGCCATAACTGC+TGG 0.516874 1:+16165392 None:intergenic
TCATACTCATTATGGTTTGG+AGG 0.520930 1:-16166853 MsG0180001113.01.T01:CDS
GAGAATTCCGGGTTTGGCAC+CGG 0.521354 1:+16167732 None:intergenic
CTTGGAATGACAATTTCTGT+TGG 0.522627 1:+16164153 None:intergenic
TGGTTGAAATTAGACCCTCT+TGG 0.523061 1:+16167939 None:intergenic
CCCTAAAGCCACCGGAGTCG+CGG 0.523391 1:-16166924 MsG0180001113.01.T01:CDS
CCGCGACCGTCAAATTTGAC+TGG 0.525623 1:-16167990 MsG0180001113.01.T01:CDS
TCTGTCCAGTCTTCTTCTAG+AGG 0.530364 1:-16167849 MsG0180001113.01.T01:CDS
TCTATCGCCGTTGGCCTCCG+TGG 0.532052 1:-16165371 MsG0180001113.01.T01:CDS
CGGCGAAAACCGCGACAAAA+CGG 0.532255 1:+16168522 None:intergenic
GTCTGATGCTGGTCTTGGAA+TGG 0.532632 1:-16166527 MsG0180001113.01.T01:CDS
TTGGTCCTCTAGAAGAAGAC+TGG 0.534857 1:+16167844 None:intergenic
ATTTGTAATTGTAGAGTACA+AGG 0.536418 1:+16168978 None:intergenic
AGTAGAGTAGAGTAATTGGA+AGG 0.536719 1:+16164326 None:intergenic
ATTTCCATACTGTCTGATGC+TGG 0.538744 1:-16166538 MsG0180001113.01.T01:CDS
CTATCGCCGTTGGCCTCCGT+GGG 0.540857 1:-16165370 MsG0180001113.01.T01:CDS
ACCCAATGGACCTAACAAGT+TGG 0.543856 1:-16166972 MsG0180001113.01.T01:CDS
CCATAACTGCTGGACCAGTA+AGG 0.545402 1:+16165402 None:intergenic
GACACTTGAATCCGCGACTC+CGG 0.551443 1:+16166913 None:intergenic
TCTTGGTTGATAACCCATCA+TGG 0.553358 1:+16167902 None:intergenic
ATGTTACATGCTCTCTCTTG+AGG 0.554694 1:+16164019 None:intergenic
GTGGCTTTAGGGTGGAGCTC+CGG 0.554827 1:+16166935 None:intergenic
AAATTTATAATAGAAAATGA+AGG 0.557862 1:+16168743 None:intergenic
GCAGCAGCTTCTATCGCCGT+TGG 0.558133 1:-16165380 MsG0180001113.01.T01:CDS
TTTGATGCCGCAACAACCGC+AGG 0.558725 1:-16167673 MsG0180001113.01.T01:CDS
TTTATACCGGAACATTGATC+CGG 0.563096 1:+16168545 None:intergenic
GATTGTTGGTTGAGATGAAG+TGG 0.564135 1:+16168483 None:intergenic
TATGATCTTAGCCTACGGTT+CGG 0.565033 1:-16168591 MsG0180001113.01.T01:CDS
TGTCGGAAAACTCATGCCTC+CGG 0.565467 1:-16166894 MsG0180001113.01.T01:CDS
CCAGTCAAATTTGACGGTCG+CGG 0.567450 1:+16167990 None:intergenic
GTCAAGAAAAGGAAATTGGT+GGG 0.568661 1:-16167045 MsG0180001113.01.T01:CDS
AAAATGGGAAAGAAAACGGT+TGG 0.570567 1:+16168766 None:intergenic
CTTCAAGTTCAATGGGGTGA+AGG 0.574592 1:-16167014 MsG0180001113.01.T01:CDS
GAGGGTCCCACGGAGGCCAA+CGG 0.576668 1:+16165364 None:intergenic
AATTCGGAACAATCCGAAGA+GGG 0.578362 1:-16167546 MsG0180001113.01.T01:CDS
GAGCTCCACCCTAAAGCCAC+CGG 0.581241 1:-16166932 MsG0180001113.01.T01:CDS
GAGAGCATGTAACATTGTAA+GGG 0.581953 1:-16164011 MsG0180001113.01.T01:three_prime_UTR
GAAATTAGACCCTCTTGGGG+TGG 0.582116 1:+16167944 None:intergenic
CAATAGGCTGCACTTCCACA+AGG 0.583775 1:-16164549 MsG0180001113.01.T01:intron
GAACAATAGCTACATGTAGG+AGG 0.585385 1:+16165345 None:intergenic
ACTTGAATCCGCGACTCCGG+TGG 0.585921 1:+16166916 None:intergenic
AGTTAACTAGGAGTATAGGA+AGG 0.586720 1:+16168795 None:intergenic
GTGGAATGAAAGGAGAGGTA+CGG 0.587057 1:+16168502 None:intergenic
AAGTTCAATGGGGTGAAGGT+AGG 0.588094 1:-16167010 MsG0180001113.01.T01:CDS
GAACAAGGAGAAGGACCCAA+TGG 0.588943 1:-16166986 MsG0180001113.01.T01:CDS
CTGTACTAAGAATGGCTGGA+TGG 0.589732 1:+16164490 None:intergenic
AGTAAGGAATCTTATAGCCA+TGG 0.592444 1:+16165418 None:intergenic
GGGGTGAAGGTAGGAGAACA+AGG 0.592671 1:-16167001 MsG0180001113.01.T01:CDS
ATCGACCTTAAAGGAAACAA+TGG 0.593244 1:+16168139 None:intergenic
ACAATCCGAAGAGGGTGCTA+AGG 0.593701 1:-16167538 MsG0180001113.01.T01:CDS
GTAGAGTAGAGTAATTGGAA+GGG 0.595548 1:+16164327 None:intergenic
TTACACTGTCTTAACAGCAG+TGG 0.596282 1:-16168630 MsG0180001113.01.T01:CDS
TTGAGATGAAGTGGAATGAA+AGG 0.597744 1:+16168492 None:intergenic
ATGCATCAGTTGGTGATGAT+GGG 0.598176 1:-16168073 MsG0180001113.01.T01:CDS
TCATGGAGTAAAACTCCTGA+TGG 0.598436 1:+16167919 None:intergenic
GTTGCTATGATCTTAGCCTA+CGG 0.598914 1:-16168596 MsG0180001113.01.T01:CDS
AATTGAACCTGCGGTTGTTG+CGG 0.599082 1:+16167666 None:intergenic
AGACGTGTCATGACGCTCGC+CGG 0.600055 1:+16166875 None:intergenic
AGACATAAAAGAGGAAAACA+TGG 0.600168 1:-16163988 MsG0180001113.01.T01:three_prime_UTR
CAACCCAAGATCATTGCATG+TGG 0.601268 1:-16165461 MsG0180001113.01.T01:CDS
TTGAGGAAGTAATTATGTAG+AGG 0.602465 1:-16163880 MsG0180001113.01.T01:three_prime_UTR
CCTGAACAATAGCTACATGT+AGG 0.602969 1:+16165342 None:intergenic
CGACTCCGGTGGCTTTAGGG+TGG 0.603330 1:+16166927 None:intergenic
GTATAGAAACTAGAAAGAGA+AGG 0.606056 1:+16168907 None:intergenic
AAGGTAGGAGAACAAGGAGA+AGG 0.608019 1:-16166995 MsG0180001113.01.T01:CDS
GGTCAAGAAAAGGAAATTGG+TGG 0.613131 1:-16167046 MsG0180001113.01.T01:CDS
ATACCTACCTAAAGGCAACA+AGG 0.617062 1:+16166777 None:intergenic
AACAATAGCTACATGTAGGA+GGG 0.617085 1:+16165346 None:intergenic
GGAGTCGCGGATTCAAGTGT+CGG 0.620160 1:-16166911 MsG0180001113.01.T01:CDS
TACCTACCTAAAGGCAACAA+GGG 0.621757 1:+16166778 None:intergenic
TGGAAGATAGTAAACATGCA+TGG 0.626487 1:-16164265 MsG0180001113.01.T01:three_prime_UTR
CCACCAACGGACCGAACCGT+AGG 0.627762 1:+16168580 None:intergenic
AATGGTGAAACCAATAACAA+AGG 0.629421 1:-16167480 MsG0180001113.01.T01:intron
AAAGGAAACAATGGAAGCCG+CGG 0.630714 1:+16168148 None:intergenic
GAAGTATTCTATTCTTCACA+AGG 0.632098 1:-16164231 MsG0180001113.01.T01:three_prime_UTR
ATGAAGTGGAATGAAAGGAG+AGG 0.632775 1:+16168497 None:intergenic
TTTGTCTGCAATTGAACCTG+CGG 0.633224 1:+16167657 None:intergenic
AAGAGTTGCATATGTTTGTG+TGG 0.633927 1:-16167620 MsG0180001113.01.T01:CDS
GGTTTGTGAGACTAAGATGA+GGG 0.635837 1:+16168885 None:intergenic
GTCTCAGCTCCACCCCAAGA+GGG 0.636397 1:-16167953 MsG0180001113.01.T01:CDS
TGCTAAGGAGATCAGGATGG+TGG 0.637132 1:-16167523 MsG0180001113.01.T01:CDS
CGTGTCATGACGCTCGCCGG+AGG 0.639607 1:+16166878 None:intergenic
TTGTAAGGGAGACATAAAAG+AGG 0.640038 1:-16163997 MsG0180001113.01.T01:three_prime_UTR
TAAGGAGATCAGGATGGTGG+TGG 0.640923 1:-16167520 MsG0180001113.01.T01:CDS
GTGAGAAAATCTTCCACCAA+CGG 0.645716 1:+16168567 None:intergenic
AAAAGAGGAAAACATGGGAA+CGG 0.649795 1:-16163982 MsG0180001113.01.T01:three_prime_UTR
GACATAAAAGAGGAAAACAT+GGG 0.651787 1:-16163987 MsG0180001113.01.T01:three_prime_UTR
GTTGAAATTAGACCCTCTTG+GGG 0.655412 1:+16167941 None:intergenic
AACCCAAGATCATTGCATGT+GGG 0.657323 1:-16165460 MsG0180001113.01.T01:CDS
TCAAGAAAAGGAAATTGGTG+GGG 0.659437 1:-16167044 MsG0180001113.01.T01:CDS
AGTCTCAGCTCCACCCCAAG+AGG 0.662338 1:-16167954 MsG0180001113.01.T01:CDS
TTAGGAAGTCTAACGCGTCG+CGG 0.669107 1:-16168034 MsG0180001113.01.T01:CDS
TGGTTTGTGAGACTAAGATG+AGG 0.671362 1:+16168884 None:intergenic
GGGTGCTAAGGAGATCAGGA+TGG 0.673250 1:-16167526 MsG0180001113.01.T01:CDS
AAATTCGGAACAATCCGAAG+AGG 0.673663 1:-16167547 MsG0180001113.01.T01:CDS
CTACATGTAGGAGGGTCCCA+CGG 0.676202 1:+16165354 None:intergenic
ACAAATGGAACAATCCCTTG+TGG 0.676637 1:+16164534 None:intergenic
GGAGCAGTTTCCAGAAACCG+CGG 0.676934 1:-16168165 MsG0180001113.01.T01:CDS
TGATTAAAAGCTTAGCACCA+CGG 0.678635 1:+16168189 None:intergenic
CCATACATAGCAATTAACAA+AGG 0.679313 1:+16168296 None:intergenic
AGGTGTGTCAGAGAAAGTAG+GGG 0.684117 1:+16168927 None:intergenic
GGAAGTCTAACGCGTCGCGG+AGG 0.686204 1:-16168031 MsG0180001113.01.T01:CDS
GGTGTGTCAGAGAAAGTAGG+GGG 0.690706 1:+16168928 None:intergenic
AATAGGCTGCACTTCCACAA+GGG 0.700469 1:-16164548 MsG0180001113.01.T01:intron
GTTGGGCTCGAATTCAACGC+CGG 0.711535 1:-16166954 MsG0180001113.01.T01:CDS
CATGTAGGAGGGTCCCACGG+AGG 0.715446 1:+16165357 None:intergenic
AGAGGACTTCAAGTTCAATG+GGG 0.771569 1:-16167020 MsG0180001113.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATATATATATATATAT+AGG + Chr1:16167672-16167653 None:intergenic 0.0%
!! TATATATATATATATATATA+GGG + Chr1:16167671-16167652 None:intergenic 0.0%
!! AAATTTATAATAGAAAATGA+AGG + Chr1:16164001-16164020 None:intergenic 10.0%
!! ATAAAAAATTAAAAGAAGTT+TGG - Chr1:16166033-16166052 MsG0180001113.01.T01:intron 10.0%
!! ATAAAAGAAAATTAGTATAT+AGG + Chr1:16166706-16166725 None:intergenic 10.0%
!! CATATTTGTTTATTATATTT+AGG - Chr1:16167241-16167260 MsG0180001113.01.T01:intron 10.0%
!! TAATTTAATTCTAATATAGT+TGG - Chr1:16165451-16165470 MsG0180001113.01.T01:CDS 10.0%
!! TTCATATAAAATTATACAAA+TGG + Chr1:16168835-16168854 None:intergenic 10.0%
!!! CTTTAAAACTAAAATAATTT+GGG + Chr1:16167761-16167780 None:intergenic 10.0%
!!! GTATAATTTTATATGAAAAT+CGG - Chr1:16168838-16168857 MsG0180001113.01.T01:five_prime_UTR 10.0%
!!! TCTTTAAAACTAAAATAATT+TGG + Chr1:16167762-16167781 None:intergenic 10.0%
!!! TTTATTTTTTTTATTTGAGA+AGG - Chr1:16168542-16168561 MsG0180001113.01.T01:CDS 10.0%
!! ACAATAATCATGATAATAAT+AGG + Chr1:16168921-16168940 None:intergenic 15.0%
!! ATGTGATTGAAAAATAAATA+AGG + Chr1:16168294-16168313 None:intergenic 15.0%
!! ATTCATTTGTCTTAAATTAT+TGG + Chr1:16167128-16167147 None:intergenic 15.0%
!! CTCATCATATATATATATAT+GGG - Chr1:16167443-16167462 MsG0180001113.01.T01:intron 15.0%
!! TCTCATCATATATATATATA+TGG - Chr1:16167442-16167461 MsG0180001113.01.T01:intron 15.0%
!! TTAGAAATATATCAACAAAA+GGG + Chr1:16167100-16167119 None:intergenic 15.0%
!! TTGATAGAAAGAAAAAAAAA+AGG - Chr1:16167994-16168013 MsG0180001113.01.T01:CDS 15.0%
!! TTGTTAAATTAATCTAACAA+CGG - Chr1:16165401-16165420 MsG0180001113.01.T01:CDS 15.0%
!! TTGTTAGATTAATTTAACAA+CGG + Chr1:16165401-16165420 None:intergenic 15.0%
!! TTTAGAAATATATCAACAAA+AGG + Chr1:16167101-16167120 None:intergenic 15.0%
!!! ATTGATTTCTCTATTATTTT+AGG + Chr1:16166185-16166204 None:intergenic 15.0%
!!! GTTTTGTTTTTTATTATTCA+TGG - Chr1:16168977-16168996 MsG0180001113.01.T01:five_prime_UTR 15.0%
!!! TTTTTATAAATTGAATTGCA+GGG - Chr1:16168370-16168389 MsG0180001113.01.T01:CDS 15.0%
!!! TTTTTTATAAATTGAATTGC+AGG - Chr1:16168369-16168388 MsG0180001113.01.T01:CDS 15.0%
!! AAAGAAGAATAAACAAAATG+AGG + Chr1:16167191-16167210 None:intergenic 20.0%
!! AATAGAAAATGAAGGAAAAT+GGG + Chr1:16163993-16164012 None:intergenic 20.0%
!! ACAAAACATGATAATATTGA+AGG - Chr1:16168124-16168143 MsG0180001113.01.T01:CDS 20.0%
!! AGTCAAATTATATCTAGAAA+TGG - Chr1:16168794-16168813 MsG0180001113.01.T01:five_prime_UTR 20.0%
!! AGTTATGTAACTATTATTGT+TGG - Chr1:16166128-16166147 MsG0180001113.01.T01:intron 20.0%
!! ATTATATTTAGGTCTGTTTA+TGG - Chr1:16167252-16167271 MsG0180001113.01.T01:intron 20.0%
!! ATTATGAGATTGTTAACTTA+TGG - Chr1:16168150-16168169 MsG0180001113.01.T01:CDS 20.0%
!! CATGATAATAATAGGTAAAA+AGG + Chr1:16168913-16168932 None:intergenic 20.0%
!! GAAATCTTTGTTAATTAAAG+TGG - Chr1:16166856-16166875 MsG0180001113.01.T01:CDS 20.0%
!! GTAATGATAAGTTTCTAATT+TGG - Chr1:16165659-16165678 MsG0180001113.01.T01:intron 20.0%
!! GTATTCCATTAAATTTACTT+AGG + Chr1:16167962-16167981 None:intergenic 20.0%
!! TAATAGAAAATGAAGGAAAA+TGG + Chr1:16163994-16164013 None:intergenic 20.0%
!! TGAATCCTAAGTAAATTTAA+TGG - Chr1:16167954-16167973 MsG0180001113.01.T01:CDS 20.0%
!! TTCTAATTTGGATAAATTGA+AGG - Chr1:16165671-16165690 MsG0180001113.01.T01:intron 20.0%
!! TTGTTAATTAAAGTGGTTAA+TGG - Chr1:16166863-16166882 MsG0180001113.01.T01:CDS 20.0%
!!! AATAAGTTTTATAACACTTG+AGG + Chr1:16166970-16166989 None:intergenic 20.0%
!!! ATATTATCATGTTTTGTGAT+AGG + Chr1:16168121-16168140 None:intergenic 20.0%
!!! ATCTTTTAGTGTTATCATTT+TGG + Chr1:16164089-16164108 None:intergenic 20.0%
!!! CATGTTGATGATTATAAAAA+AGG - Chr1:16166359-16166378 MsG0180001113.01.T01:intron 20.0%
!!! TGTTTATTCTTCTTTTTCTA+AGG - Chr1:16167196-16167215 MsG0180001113.01.T01:intron 20.0%
! AAAAACACCTATTCATACTT+TGG - Chr1:16168456-16168475 MsG0180001113.01.T01:CDS 25.0%
! AAAAATGTGACACTTCTTAT+GGG + Chr1:16167027-16167046 None:intergenic 25.0%
! AACAAACATCACCAATATAA+TGG + Chr1:16166504-16166523 None:intergenic 25.0%
! AAGAATTATTGAGGAGAAAT+TGG + Chr1:16166280-16166299 None:intergenic 25.0%
! AAGATCATAGCAACATATAA+TGG + Chr1:16164139-16164158 None:intergenic 25.0%
! AAGTTTCCAACAAAGAAAAA+TGG - Chr1:16168608-16168627 MsG0180001113.01.T01:CDS 25.0%
! AATCAATGACTAATCATTGT+TGG + Chr1:16165551-16165570 None:intergenic 25.0%
! ACTTTATAATACCTACCTAA+AGG + Chr1:16165975-16165994 None:intergenic 25.0%
! AGTTTCCAACAAAGAAAAAT+GGG - Chr1:16168609-16168628 MsG0180001113.01.T01:CDS 25.0%
! ATAAAAGACACCTTCATAAA+AGG + Chr1:16167484-16167503 None:intergenic 25.0%
! ATGTGATAGAAGAATTATTG+AGG + Chr1:16166289-16166308 None:intergenic 25.0%
! ATTTGTAATTGTAGAGTACA+AGG + Chr1:16163766-16163785 None:intergenic 25.0%
! CGGGTTAATTATAGTTATAA+CGG - Chr1:16165347-16165366 MsG0180001113.01.T01:CDS 25.0%
! CTAAAAATGGCAATTTAGAA+TGG - Chr1:16164368-16164387 MsG0180001113.01.T01:intron 25.0%
! GTATGAATATGAGAAAAGTA+TGG - Chr1:16166442-16166461 MsG0180001113.01.T01:intron 25.0%
! TAAAAATGTGACACTTCTTA+TGG + Chr1:16167028-16167047 None:intergenic 25.0%
! TAATTTGGATAAATTGAAGG+TGG - Chr1:16165674-16165693 MsG0180001113.01.T01:intron 25.0%
! TATATCTTAAAAGACACACA+TGG + Chr1:16166778-16166797 None:intergenic 25.0%
! TCATCTTGGAATTTCTAATA+TGG + Chr1:16168687-16168706 None:intergenic 25.0%
! TGGTAGTAAAGTAAAATGAA+TGG - Chr1:16166382-16166401 MsG0180001113.01.T01:intron 25.0%
! TGTCAATAAGCATTTCTATT+TGG - Chr1:16168018-16168037 MsG0180001113.01.T01:CDS 25.0%
! TTATGTAGAGGAAAAGAAAT+TGG - Chr1:16168873-16168892 MsG0180001113.01.T01:five_prime_UTR 25.0%
! TTCTTTATTCAGTGTCTATT+GGG + Chr1:16167732-16167751 None:intergenic 25.0%
! TTGAATAAGTGTTTGGATTA+CGG + Chr1:16165922-16165941 None:intergenic 25.0%
!! AAGGTAACGTAGTTTAAAAT+TGG + Chr1:16166601-16166620 None:intergenic 25.0%
!! AATCTGAAGTTCATTTGATA+TGG + Chr1:16164283-16164302 None:intergenic 25.0%
!! AGGTAACGTAGTTTAAAATT+GGG + Chr1:16166600-16166619 None:intergenic 25.0%
!! ATATGAGAAAAGTATGGATT+TGG - Chr1:16166448-16166467 MsG0180001113.01.T01:intron 25.0%
!! ATGATTGAATTTGAGAGTAT+GGG - Chr1:16166416-16166435 MsG0180001113.01.T01:intron 25.0%
!! ATTTTTCTTTGTTGGAAACT+TGG + Chr1:16168609-16168628 None:intergenic 25.0%
!! GAATTTGAGAAAAAGTTGAT+AGG - Chr1:16168631-16168650 MsG0180001113.01.T01:CDS 25.0%
!! TATGAGAAAAGTATGGATTT+GGG - Chr1:16166449-16166468 MsG0180001113.01.T01:intron 25.0%
!! TTTTAAATTGCACCTACAAT+CGG - Chr1:16165327-16165346 MsG0180001113.01.T01:intron 25.0%
!! TTTTATATGAAAATCGGTTG+AGG - Chr1:16168844-16168863 MsG0180001113.01.T01:five_prime_UTR 25.0%
!!! AAATTCCCATTTTTCTTTGT+TGG + Chr1:16168617-16168636 None:intergenic 25.0%
!!! ATACAAATGGTTGATAGAAA+GGG + Chr1:16168822-16168841 None:intergenic 25.0%
!!! GTTGATGATTATAAAAAAGG+TGG - Chr1:16166362-16166381 MsG0180001113.01.T01:intron 25.0%
!!! TATACAAATGGTTGATAGAA+AGG + Chr1:16168823-16168842 None:intergenic 25.0%
!!! TTTTAGTGAAGTTTGTTGAA+TGG + Chr1:16164050-16164069 None:intergenic 25.0%
!!! TTTTTTAAATATCGGAGAAG+TGG - Chr1:16166832-16166851 MsG0180001113.01.T01:CDS 25.0%
AAAGTGAAAATCACACCTTA+AGG - Chr1:16167581-16167600 MsG0180001113.01.T01:CDS 30.0%
AACACTTATTCAAGTCTCAT+TGG - Chr1:16165929-16165948 MsG0180001113.01.T01:intron 30.0%
AACCATAGTGGTTGAAATAA+TGG - Chr1:16166669-16166688 MsG0180001113.01.T01:intron 30.0%
AAGGAAAATGGGAAAGAAAA+CGG + Chr1:16163982-16164001 None:intergenic 30.0%
AATGGTGAAACCAATAACAA+AGG - Chr1:16165261-16165280 MsG0180001113.01.T01:intron 30.0%
ACTATAATTAACCCGATTGT+AGG + Chr1:16165342-16165361 None:intergenic 30.0%
ACTCTCAAATTCAATCATGT+TGG + Chr1:16166414-16166433 None:intergenic 30.0%
AGACATAAAAGAGGAAAACA+TGG - Chr1:16168753-16168772 MsG0180001113.01.T01:five_prime_UTR 30.0%
AGGTTTAATCTTAGAACCAA+TGG + Chr1:16165504-16165523 None:intergenic 30.0%
ATATCAACAAAAGGGTAAAG+TGG + Chr1:16167092-16167111 None:intergenic 30.0%
ATATGGAGACATTAGCATTA+TGG + Chr1:16168670-16168689 None:intergenic 30.0%
ATGAGACTTGAATAAGTGTT+TGG + Chr1:16165929-16165948 None:intergenic 30.0%
ATGTAGTAGAGTAGAGTAAT+TGG + Chr1:16168422-16168441 None:intergenic 30.0%
CATGATTGAATTTGAGAGTA+TGG - Chr1:16166415-16166434 MsG0180001113.01.T01:intron 30.0%
CCATACATAGCAATTAACAA+AGG + Chr1:16164448-16164467 None:intergenic 30.0%
CCTTCAAATTTCGAAGAAAA+TGG - Chr1:16164928-16164947 MsG0180001113.01.T01:intron 30.0%
CCTTGAAAATTACATCATCT+TGG + Chr1:16168701-16168720 None:intergenic 30.0%
CCTTTGTTAATTGCTATGTA+TGG - Chr1:16164445-16164464 MsG0180001113.01.T01:intron 30.0%
CTATCTTCCAAAGTATGAAT+AGG + Chr1:16168466-16168485 None:intergenic 30.0%
CTTCTTTATTCAGTGTCTAT+TGG + Chr1:16167733-16167752 None:intergenic 30.0%
GACATAAAAGAGGAAAACAT+GGG - Chr1:16168754-16168773 MsG0180001113.01.T01:five_prime_UTR 30.0%
GCTGATGAACATAATCAAAA+TGG - Chr1:16165243-16165262 MsG0180001113.01.T01:intron 30.0%
GTATAGAAACTAGAAAGAGA+AGG + Chr1:16163837-16163856 None:intergenic 30.0%
TATGGAGACATTAGCATTAT+GGG + Chr1:16168669-16168688 None:intergenic 30.0%
TCAACCACTATGGTTAATTA+GGG + Chr1:16166664-16166683 None:intergenic 30.0%
TCTTTATTCAGTGTCTATTG+GGG + Chr1:16167731-16167750 None:intergenic 30.0%
TGATTATTCAGGTAGCTTAA+TGG - Chr1:16164468-16164487 MsG0180001113.01.T01:intron 30.0%
TGGACATTGTTCACTAAAAA+TGG - Chr1:16164355-16164374 MsG0180001113.01.T01:intron 30.0%
TGGTTCTTCAGTGTATTATT+TGG - Chr1:16164500-16164519 MsG0180001113.01.T01:CDS 30.0%
TGTAGCTCATATGGTTAAAA+AGG + Chr1:16167876-16167895 None:intergenic 30.0%
TTAAACCTAGTATATTCCGA+AGG - Chr1:16165516-16165535 MsG0180001113.01.T01:intron 30.0%
TTCAACCACTATGGTTAATT+AGG + Chr1:16166665-16166684 None:intergenic 30.0%
TTCCATTATTTCAACCACTA+TGG + Chr1:16166674-16166693 None:intergenic 30.0%
TTGAATTGCAGGGTTATATT+TGG - Chr1:16168380-16168399 MsG0180001113.01.T01:CDS 30.0%
TTGAGGAAGTAATTATGTAG+AGG - Chr1:16168861-16168880 MsG0180001113.01.T01:five_prime_UTR 30.0%
TTGAGGAGAAATTGGATAAA+TGG + Chr1:16166272-16166291 None:intergenic 30.0%
TTTAAATTGCACCTACAATC+GGG - Chr1:16165328-16165347 MsG0180001113.01.T01:intron 30.0%
! AACATCACCAATATAATGGA+TGG + Chr1:16166500-16166519 None:intergenic 30.0%
! AACCAAGACATTCCAATTTT+GGG - Chr1:16164854-16164873 MsG0180001113.01.T01:intron 30.0%
! ACTCATTCTGTGCAAAATTT+TGG + Chr1:16163915-16163934 None:intergenic 30.0%
! ACTTATGGTAATGAATGTTG+TGG - Chr1:16168165-16168184 MsG0180001113.01.T01:CDS 30.0%
! AGTTAGTTAACTAGGAGTAT+AGG + Chr1:16163953-16163972 None:intergenic 30.0%
! ATAGAAGACACCTTTTATGA+AGG - Chr1:16167471-16167490 MsG0180001113.01.T01:intron 30.0%
! ATGAGAAAAGTATGGATTTG+GGG - Chr1:16166450-16166469 MsG0180001113.01.T01:intron 30.0%
! ATTGCCTATACCTTTGTTAT+TGG + Chr1:16165274-16165293 None:intergenic 30.0%
! CCAAGATGATGTAATTTTCA+AGG - Chr1:16168698-16168717 MsG0180001113.01.T01:five_prime_UTR 30.0%
! CCATTTTCTTCGAAATTTGA+AGG + Chr1:16164931-16164950 None:intergenic 30.0%
! GAAACCAATAACAAAGGTAT+AGG - Chr1:16165267-16165286 MsG0180001113.01.T01:intron 30.0%
! GAAGTATTCTATTCTTCACA+AGG - Chr1:16168510-16168529 MsG0180001113.01.T01:CDS 30.0%
! GTTCATTTGATATGGATTGT+TGG + Chr1:16164275-16164294 None:intergenic 30.0%
! TAACAAAGGTATAGGCAATT+AGG - Chr1:16165275-16165294 MsG0180001113.01.T01:intron 30.0%
! TACTCTTTTGCAAACACAAA+TGG + Chr1:16168225-16168244 None:intergenic 30.0%
! TTTTATCAAGTCACACCTTA+AGG + Chr1:16167599-16167618 None:intergenic 30.0%
!! AAAGACACCAACTTACTTTT+AGG - Chr1:16167529-16167548 MsG0180001113.01.T01:CDS 30.0%
!! ATAGGTGTTTTTACAAACCA+AGG + Chr1:16168448-16168467 None:intergenic 30.0%
!! GAGAATGGATTAGCATATAT+TGG + Chr1:16168044-16168063 None:intergenic 30.0%
!! TTTTGATTCTGATTCTTCAC+AGG + Chr1:16165048-16165067 None:intergenic 30.0%
!!! TAAGGTTTAGTTTTACTGCT+TGG - Chr1:16167214-16167233 MsG0180001113.01.T01:intron 30.0%
AAAAGAGGAAAACATGGGAA+CGG - Chr1:16168759-16168778 MsG0180001113.01.T01:five_prime_UTR 35.0%
AAAATGGGAAAGAAAACGGT+TGG + Chr1:16163978-16163997 None:intergenic 35.0%
AAATTTGAAGGTCTAGGAGT+TGG + Chr1:16164919-16164938 None:intergenic 35.0%
AACAATAGCTACATGTAGGA+GGG + Chr1:16167398-16167417 None:intergenic 35.0%
AAGAGTTGCATATGTTTGTG+TGG - Chr1:16165121-16165140 MsG0180001113.01.T01:intron 35.0%
AATTGAAGGTGGTCAAGAAA+AGG - Chr1:16165685-16165704 MsG0180001113.01.T01:intron 35.0%
ACACCTTCCTAAAAGTAAGT+TGG + Chr1:16167539-16167558 None:intergenic 35.0%
ACTTCCTAACACTTTGGTTA+TGG - Chr1:16164417-16164436 MsG0180001113.01.T01:intron 35.0%
AGACACTGAATAAAGAAGAG+TGG - Chr1:16167735-16167754 MsG0180001113.01.T01:CDS 35.0%
AGTAAGGAATCTTATAGCCA+TGG + Chr1:16167326-16167345 None:intergenic 35.0%
AGTAGAGTAGAGTAATTGGA+AGG + Chr1:16168418-16168437 None:intergenic 35.0%
ATCAACACTTCCTAACACTT+TGG - Chr1:16164411-16164430 MsG0180001113.01.T01:intron 35.0%
ATCGACCTTAAAGGAAACAA+TGG + Chr1:16164605-16164624 None:intergenic 35.0%
ATGGCTATAAGATTCCTTAC+TGG - Chr1:16167325-16167344 MsG0180001113.01.T01:intron 35.0%
CAAATCATTAGCCCCAAAAT+TGG + Chr1:16164869-16164888 None:intergenic 35.0%
CACATCAAGTACGAAAAAAG+AGG - Chr1:16167803-16167822 MsG0180001113.01.T01:CDS 35.0%
CTCATAGCCATCCATTATAT+TGG - Chr1:16166490-16166509 MsG0180001113.01.T01:intron 35.0%
CTTCCTAACACTTTGGTTAT+GGG - Chr1:16164418-16164437 MsG0180001113.01.T01:intron 35.0%
CTTGGAATGACAATTTCTGT+TGG + Chr1:16168591-16168610 None:intergenic 35.0%
GCTATGTATGGTGATTATTC+AGG - Chr1:16164457-16164476 MsG0180001113.01.T01:intron 35.0%
GGAAGTTACATGTTACTGTT+AGG - Chr1:16164689-16164708 MsG0180001113.01.T01:intron 35.0%
GTAGAGTAGAGTAATTGGAA+GGG + Chr1:16168417-16168436 None:intergenic 35.0%
GTCAAGAAAAGGAAATTGGT+GGG - Chr1:16165696-16165715 MsG0180001113.01.T01:intron 35.0%
GTCTCATACTCATTATGGTT+TGG - Chr1:16165885-16165904 MsG0180001113.01.T01:intron 35.0%
TAAAATTGGGTCCCATATGT+CGG + Chr1:16166587-16166606 None:intergenic 35.0%
TCAAGAAAAGGAAATTGGTG+GGG - Chr1:16165697-16165716 MsG0180001113.01.T01:intron 35.0%
TCTTCGAAATTTGAAGGTCT+AGG + Chr1:16164925-16164944 None:intergenic 35.0%
TGAATGTTGTGGTTGACAAT+AGG - Chr1:16168176-16168195 MsG0180001113.01.T01:CDS 35.0%
TGATAAAAGACACCACCAAA+GGG - Chr1:16167611-16167630 MsG0180001113.01.T01:CDS 35.0%
TGATTAAAAGCTTAGCACCA+CGG + Chr1:16164555-16164574 None:intergenic 35.0%
TGCTAGTAGCACTTTCATTA+TGG - Chr1:16164335-16164354 MsG0180001113.01.T01:CDS 35.0%
TGGAAGATAGTAAACATGCA+TGG - Chr1:16168476-16168495 MsG0180001113.01.T01:CDS 35.0%
TTACGTAAGTGTAGCTCATA+TGG + Chr1:16167885-16167904 None:intergenic 35.0%
TTAGTAGTAGAGGAGAATTC+CGG + Chr1:16165024-16165043 None:intergenic 35.0%
TTGAGATGAAGTGGAATGAA+AGG + Chr1:16164252-16164271 None:intergenic 35.0%
TTGATAAAAGACACCACCAA+AGG - Chr1:16167610-16167629 MsG0180001113.01.T01:CDS 35.0%
TTGTAAGGGAGACATAAAAG+AGG - Chr1:16168744-16168763 MsG0180001113.01.T01:five_prime_UTR 35.0%
TTTATACCGGAACATTGATC+CGG + Chr1:16164199-16164218 None:intergenic 35.0%
! AAGAGGACTTCAAGTTCAAT+GGG - Chr1:16165720-16165739 MsG0180001113.01.T01:intron 35.0%
! ACCAAGACATTCCAATTTTG+GGG - Chr1:16164855-16164874 MsG0180001113.01.T01:intron 35.0%
! AGAGAGCATGTAACATTGTA+AGG - Chr1:16168729-16168748 MsG0180001113.01.T01:five_prime_UTR 35.0%
! AGTTAACTAGGAGTATAGGA+AGG + Chr1:16163949-16163968 None:intergenic 35.0%
! ATTCCCATAACCAAAGTGTT+AGG + Chr1:16164424-16164443 None:intergenic 35.0%
! CAACCAAGACATTCCAATTT+TGG - Chr1:16164853-16164872 MsG0180001113.01.T01:intron 35.0%
! CTATGTTTAGCTTAGGTAAG+TGG - Chr1:16166237-16166256 MsG0180001113.01.T01:intron 35.0%
! GAGAGCATGTAACATTGTAA+GGG - Chr1:16168730-16168749 MsG0180001113.01.T01:five_prime_UTR 35.0%
! GGTTGGTTAGTTAGTTAACT+AGG + Chr1:16163961-16163980 None:intergenic 35.0%
! TCATACTCATTATGGTTTGG+AGG - Chr1:16165888-16165907 MsG0180001113.01.T01:intron 35.0%
! TGAGAAAAGTATGGATTTGG+GGG - Chr1:16166451-16166470 MsG0180001113.01.T01:intron 35.0%
! TTGAATTTGAGAGTATGGGT+AGG - Chr1:16166420-16166439 MsG0180001113.01.T01:intron 35.0%
!! AATTTTGGTGACTACTCTCT+AGG + Chr1:16163900-16163919 None:intergenic 35.0%
!! ACACCAACTTACTTTTAGGA+AGG - Chr1:16167533-16167552 MsG0180001113.01.T01:CDS 35.0%
!! AGGAGTACTTGTAATAGTAC+TGG + Chr1:16163880-16163899 None:intergenic 35.0%
!! CAAGTCTCATTGGTCTTATT+TGG - Chr1:16165939-16165958 MsG0180001113.01.T01:intron 35.0%
!! TAGCTTAATGGTTCAAGTTG+TGG - Chr1:16164480-16164499 MsG0180001113.01.T01:intron 35.0%
!! TGGTGCTAAGCTTTTAATCA+TGG - Chr1:16164555-16164574 MsG0180001113.01.T01:intron 35.0%
!! TGTTTCCTTTAAGGTCGATT+CGG - Chr1:16164606-16164625 MsG0180001113.01.T01:intron 35.0%
!!! CTTTTTCTTTTTGAGTACCG+TGG - Chr1:16164535-16164554 MsG0180001113.01.T01:CDS 35.0%
!!! TTGTTGGTTTTCTTACATGC+AGG - Chr1:16166144-16166163 MsG0180001113.01.T01:intron 35.0%
AAAATTGGGTCCCATATGTC+GGG + Chr1:16166586-16166605 None:intergenic 40.0%
AAATTCGGAACAATCCGAAG+AGG - Chr1:16165194-16165213 MsG0180001113.01.T01:intron 40.0%
AACATCCGAATCGACCTTAA+AGG + Chr1:16164614-16164633 None:intergenic 40.0%
AACCCAAGATCATTGCATGT+GGG - Chr1:16167281-16167300 MsG0180001113.01.T01:intron 40.0%
AACTGTGCCTAATTCGTATC+CGG - Chr1:16164990-16165009 MsG0180001113.01.T01:intron 40.0%
AAGGTGTGTCAGAGAAAGTA+GGG + Chr1:16163818-16163837 None:intergenic 40.0%
AATTCGGAACAATCCGAAGA+GGG - Chr1:16165195-16165214 MsG0180001113.01.T01:intron 40.0%
ACAAATGGAACAATCCCTTG+TGG + Chr1:16168210-16168229 None:intergenic 40.0%
ACCTTCTTCTTCAGACACAA+TGG - Chr1:16166616-16166635 MsG0180001113.01.T01:intron 40.0%
AGGGTCTAATTTCAACCATC+AGG - Chr1:16164807-16164826 MsG0180001113.01.T01:intron 40.0%
ATACCTACCTAAAGGCAACA+AGG + Chr1:16165967-16165986 None:intergenic 40.0%
ATGAAGTGGAATGAAAGGAG+AGG + Chr1:16164247-16164266 None:intergenic 40.0%
ATGTTACATGCTCTCTCTTG+AGG + Chr1:16168725-16168744 None:intergenic 40.0%
ATTCAAGCCTCTTGATCCAT+TGG - Chr1:16165485-16165504 MsG0180001113.01.T01:intron 40.0%
ATTCCCACATGCAATGATCT+TGG + Chr1:16167287-16167306 None:intergenic 40.0%
ATTGCAGACAAAAGGTTCTC+AGG - Chr1:16165095-16165114 MsG0180001113.01.T01:intron 40.0%
ATTTCCATACTGTCTGATGC+TGG - Chr1:16166203-16166222 MsG0180001113.01.T01:intron 40.0%
CAACGGAGATGTAGTTAAAG+AGG + Chr1:16165384-16165403 None:intergenic 40.0%
CAGGTTCAATTGCAGACAAA+AGG - Chr1:16165087-16165106 MsG0180001113.01.T01:intron 40.0%
CATGTCCTTCGGAATATACT+AGG + Chr1:16165524-16165543 None:intergenic 40.0%
CCTACATGTAGCTATTGTTC+AGG - Chr1:16167399-16167418 MsG0180001113.01.T01:intron 40.0%
CCTCAATGTCTTCCGAAATT+CGG - Chr1:16165179-16165198 MsG0180001113.01.T01:intron 40.0%
CCTGAACAATAGCTACATGT+AGG + Chr1:16167402-16167421 None:intergenic 40.0%
CGGAGAGATATAGTACTCTT+AGG - Chr1:16165421-16165440 MsG0180001113.01.T01:CDS 40.0%
CTACTCTACTACATTCTCCT+TGG - Chr1:16168428-16168447 MsG0180001113.01.T01:CDS 40.0%
CTTAGAACCAATGGATCAAG+AGG + Chr1:16165495-16165514 None:intergenic 40.0%
CTTCACAGGTTTAGTAGTAG+AGG + Chr1:16165034-16165053 None:intergenic 40.0%
CTTCGGATTGTTCCGAATTT+CGG + Chr1:16165194-16165213 None:intergenic 40.0%
CTTGAAACTGATGCATCAGT+TGG - Chr1:16164658-16164677 MsG0180001113.01.T01:intron 40.0%
GAACAATAGCTACATGTAGG+AGG + Chr1:16167399-16167418 None:intergenic 40.0%
GACACGTCTCATACTCATTA+TGG - Chr1:16165880-16165899 MsG0180001113.01.T01:intron 40.0%
GCTACCCTAATTAACCATAG+TGG - Chr1:16166657-16166676 MsG0180001113.01.T01:intron 40.0%
GGCTTCCATTGTTTCCTTTA+AGG - Chr1:16164597-16164616 MsG0180001113.01.T01:intron 40.0%
GGTCAAGAAAAGGAAATTGG+TGG - Chr1:16165695-16165714 MsG0180001113.01.T01:intron 40.0%
GGTGGTCAAGAAAAGGAAAT+TGG - Chr1:16165692-16165711 MsG0180001113.01.T01:intron 40.0%
GGTTGAAATTAGACCCTCTT+GGG + Chr1:16164804-16164823 None:intergenic 40.0%
GGTTTGTGAGACTAAGATGA+GGG + Chr1:16163859-16163878 None:intergenic 40.0%
GTGAGAAAATCTTCCACCAA+CGG + Chr1:16164177-16164196 None:intergenic 40.0%
GTTGAAATTAGACCCTCTTG+GGG + Chr1:16164803-16164822 None:intergenic 40.0%
GTTGAATGGCATGTGAAGAA+AGG + Chr1:16164036-16164055 None:intergenic 40.0%
GTTGCTATGATCTTAGCCTA+CGG - Chr1:16164145-16164164 MsG0180001113.01.T01:three_prime_UTR 40.0%
TACCTACCTAAAGGCAACAA+GGG + Chr1:16165966-16165985 None:intergenic 40.0%
TAGTAGTAGAGGAGAATTCC+GGG + Chr1:16165023-16165042 None:intergenic 40.0%
TATGATCTTAGCCTACGGTT+CGG - Chr1:16164150-16164169 MsG0180001113.01.T01:three_prime_UTR 40.0%
TCAGCTCCAGTCAAATTTGA+CGG + Chr1:16164760-16164779 None:intergenic 40.0%
TCATGGAGTAAAACTCCTGA+TGG + Chr1:16164825-16164844 None:intergenic 40.0%
TCCAAAGAAGCAAGAGAGAA+TGG + Chr1:16168059-16168078 None:intergenic 40.0%
TCCATTCTCTCTTGCTTCTT+TGG - Chr1:16168055-16168074 MsG0180001113.01.T01:CDS 40.0%
TCCATTGTGTCTGAAGAAGA+AGG + Chr1:16166620-16166639 None:intergenic 40.0%
TCGGATGTTATGTCGTTAGA+TGG - Chr1:16164625-16164644 MsG0180001113.01.T01:intron 40.0%
TCTTCAGACACAATGGACAA+GGG - Chr1:16166623-16166642 MsG0180001113.01.T01:intron 40.0%
TGCTTACGCTGTACTAAGAA+TGG + Chr1:16168262-16168281 None:intergenic 40.0%
TGGTTGAAATTAGACCCTCT+TGG + Chr1:16164805-16164824 None:intergenic 40.0%
TTACACTGTCTTAACAGCAG+TGG - Chr1:16164111-16164130 MsG0180001113.01.T01:three_prime_UTR 40.0%
TTATGTTACAAGCCACCCTT+TGG + Chr1:16167629-16167648 None:intergenic 40.0%
TTCCCACATGCAATGATCTT+GGG + Chr1:16167286-16167305 None:intergenic 40.0%
TTCTTCAGACACAATGGACA+AGG - Chr1:16166622-16166641 MsG0180001113.01.T01:intron 40.0%
TTGTTGGAGTTCATGTCCTT+CGG + Chr1:16165535-16165554 None:intergenic 40.0%
TTTGTCTGCAATTGAACCTG+CGG + Chr1:16165087-16165106 None:intergenic 40.0%
! AGAGGACTTCAAGTTCAATG+GGG - Chr1:16165721-16165740 MsG0180001113.01.T01:intron 40.0%
! CAGGAGTTTTACTCCATGAT+GGG - Chr1:16164826-16164845 MsG0180001113.01.T01:intron 40.0%
! GAAGAGGACTTCAAGTTCAA+TGG - Chr1:16165719-16165738 MsG0180001113.01.T01:intron 40.0%
! GATTGTTGGTTGAGATGAAG+TGG + Chr1:16164261-16164280 None:intergenic 40.0%
! GGAATGGCTATGTTTAGCTT+AGG - Chr1:16166230-16166249 MsG0180001113.01.T01:intron 40.0%
! TCAGGAGTTTTACTCCATGA+TGG - Chr1:16164825-16164844 MsG0180001113.01.T01:intron 40.0%
! TGGTTTGTGAGACTAAGATG+AGG + Chr1:16163860-16163879 None:intergenic 40.0%
! TGGTTTTCTTACATGCAGGT+GGG - Chr1:16166148-16166167 MsG0180001113.01.T01:intron 40.0%
! TTCTGTTGCTTCATTTGCCA+TGG - Chr1:16167306-16167325 MsG0180001113.01.T01:intron 40.0%
! TTGGTGGAAGATTTTCTCAC+CGG - Chr1:16164177-16164196 MsG0180001113.01.T01:three_prime_UTR 40.0%
!! ATGCATCAGTTGGTGATGAT+GGG - Chr1:16164668-16164687 MsG0180001113.01.T01:intron 40.0%
!! GTACGAAAAAAGAGGTACTG+CGG - Chr1:16167811-16167830 MsG0180001113.01.T01:CDS 40.0%
!! TCCTAGATTCGGGTTTTATC+CGG - Chr1:16164960-16164979 MsG0180001113.01.T01:intron 40.0%
!! TCTTGGTTGATAACCCATCA+TGG + Chr1:16164842-16164861 None:intergenic 40.0%
!! TTGGTTTTCTTACATGCAGG+TGG - Chr1:16166147-16166166 MsG0180001113.01.T01:intron 40.0%
AAAGACACACATGGTGAGAC+AGG + Chr1:16166769-16166788 None:intergenic 45.0%
AAAGGAAACAATGGAAGCCG+CGG + Chr1:16164596-16164615 None:intergenic 45.0%
AAAGGAAATTGGTGGGGAAG+AGG - Chr1:16165703-16165722 MsG0180001113.01.T01:intron 45.0%
AAATTGGGTCCCATATGTCG+GGG + Chr1:16166585-16166604 None:intergenic 45.0%
AAGACACACATGGTGAGACA+GGG + Chr1:16166768-16166787 None:intergenic 45.0%
AAGACCAGCATCAGACAGTA+TGG + Chr1:16166210-16166229 None:intergenic 45.0%
AAGGTAGGAGAACAAGGAGA+AGG - Chr1:16165746-16165765 MsG0180001113.01.T01:intron 45.0%
AAGTTCAATGGGGTGAAGGT+AGG - Chr1:16165731-16165750 MsG0180001113.01.T01:intron 45.0%
AATAGGCTGCACTTCCACAA+GGG - Chr1:16168193-16168212 MsG0180001113.01.T01:CDS 45.0%
AATTGAACCTGCGGTTGTTG+CGG + Chr1:16165078-16165097 None:intergenic 45.0%
ACCCAATGGACCTAACAAGT+TGG - Chr1:16165769-16165788 MsG0180001113.01.T01:intron 45.0%
AGCATAATGTCCCCGACATA+TGG - Chr1:16166572-16166591 MsG0180001113.01.T01:CDS 45.0%
AGGTGTGTCAGAGAAAGTAG+GGG + Chr1:16163817-16163836 None:intergenic 45.0%
CAACCCAAGATCATTGCATG+TGG - Chr1:16167280-16167299 MsG0180001113.01.T01:intron 45.0%
CCCAATGGACCTAACAAGTT+GGG - Chr1:16165770-16165789 MsG0180001113.01.T01:intron 45.0%
CCGAATTTCGGAAGACATTG+AGG + Chr1:16165182-16165201 None:intergenic 45.0%
CGCGACAAAACGGTTTATAC+CGG + Chr1:16164212-16164231 None:intergenic 45.0%
CTGTACTAAGAATGGCTGGA+TGG + Chr1:16168254-16168273 None:intergenic 45.0%
GCATAATGTCCCCGACATAT+GGG - Chr1:16166573-16166592 MsG0180001113.01.T01:CDS 45.0%
GCCCCAAAATTGGAATGTCT+TGG + Chr1:16164859-16164878 None:intergenic 45.0%
GGTGCAAGTTCTCCTAGATT+CGG - Chr1:16164949-16164968 MsG0180001113.01.T01:intron 45.0%
GTGCAAGTTCTCCTAGATTC+GGG - Chr1:16164950-16164969 MsG0180001113.01.T01:intron 45.0%
GTGGAATGAAAGGAGAGGTA+CGG + Chr1:16164242-16164261 None:intergenic 45.0%
TAAAAGACACCACCAAAGGG+TGG - Chr1:16167614-16167633 MsG0180001113.01.T01:CDS 45.0%
TACGCTGTACTAAGAATGGC+TGG + Chr1:16168258-16168277 None:intergenic 45.0%
TCTGTCCAGTCTTCTTCTAG+AGG - Chr1:16164892-16164911 MsG0180001113.01.T01:intron 45.0%
TTCTCACCGGATCAATGTTC+CGG - Chr1:16164190-16164209 MsG0180001113.01.T01:three_prime_UTR 45.0%
TTTGGTCCCTTGTTGCCTTT+AGG - Chr1:16165957-16165976 MsG0180001113.01.T01:intron 45.0%
! ATACTGTCTGATGCTGGTCT+TGG - Chr1:16166209-16166228 MsG0180001113.01.T01:intron 45.0%
! CGGTATAAACCGTTTTGTCG+CGG - Chr1:16164210-16164229 MsG0180001113.01.T01:three_prime_UTR 45.0%
! CTTCAAGTTCAATGGGGTGA+AGG - Chr1:16165727-16165746 MsG0180001113.01.T01:intron 45.0%
! GAAGGTGTGTCAGAGAAAGT+AGG + Chr1:16163819-16163838 None:intergenic 45.0%
! GAATTCGAGCCCAACTTGTT+AGG + Chr1:16165782-16165801 None:intergenic 45.0%
! TTGGTCCTCTAGAAGAAGAC+TGG + Chr1:16164900-16164919 None:intergenic 45.0%
! TTTGGCACCGGATACGAATT+AGG + Chr1:16165000-16165019 None:intergenic 45.0%
!! CCCAACTTGTTAGGTCCATT+GGG + Chr1:16165773-16165792 None:intergenic 45.0%
!! GATGCATCAGTTGGTGATGA+TGG - Chr1:16164667-16164686 MsG0180001113.01.T01:intron 45.0%
!! ATATTAATAATGATTATTTA+AGG - Chr1:16165607-16165626 MsG0180001113.01.T01:intron 5.0%
!!! TTATGTTTTTTTTTAAATAT+CGG - Chr1:16166824-16166843 MsG0180001113.01.T01:CDS 5.0%
CAATAGGCTGCACTTCCACA+AGG - Chr1:16168192-16168211 MsG0180001113.01.T01:CDS 50.0%
CCAGTCAAATTTGACGGTCG+CGG + Chr1:16164754-16164773 None:intergenic 50.0%
CCATAACTGCTGGACCAGTA+AGG + Chr1:16167342-16167361 None:intergenic 50.0%
CCTTACTGGTCCAGCAGTTA+TGG - Chr1:16167339-16167358 MsG0180001113.01.T01:intron 50.0%
GAAATTAGACCCTCTTGGGG+TGG + Chr1:16164800-16164819 None:intergenic 50.0%
GAACAAGGAGAAGGACCCAA+TGG - Chr1:16165755-16165774 MsG0180001113.01.T01:intron 50.0%
GATCTCCTTAGCACCCTCTT+CGG + Chr1:16165211-16165230 None:intergenic 50.0%
GCCGGATAAAACCCGAATCT+AGG + Chr1:16164964-16164983 None:intergenic 50.0%
GGTGTGTCAGAGAAAGTAGG+GGG + Chr1:16163816-16163835 None:intergenic 50.0%
GTAGAGGAGAATTCCGGGTT+TGG + Chr1:16165018-16165037 None:intergenic 50.0%
GTCCCTTGTTGCCTTTAGGT+AGG - Chr1:16165961-16165980 MsG0180001113.01.T01:intron 50.0%
TCAGACACAATGGACAAGGG+TGG - Chr1:16166626-16166645 MsG0180001113.01.T01:intron 50.0%
TGCTAAGGAGATCAGGATGG+TGG - Chr1:16165218-16165237 MsG0180001113.01.T01:intron 50.0%
TGTCGGAAAACTCATGCCTC+CGG - Chr1:16165847-16165866 MsG0180001113.01.T01:intron 50.0%
TGTTACAAGCCACCCTTTGG+TGG + Chr1:16167626-16167645 None:intergenic 50.0%
TTAGGAAGTCTAACGCGTCG+CGG - Chr1:16164707-16164726 MsG0180001113.01.T01:intron 50.0%
! TAAGGAGATCAGGATGGTGG+TGG - Chr1:16165221-16165240 MsG0180001113.01.T01:intron 50.0%
!! AAGAGGGTGCTAAGGAGATC+AGG - Chr1:16165211-16165230 MsG0180001113.01.T01:intron 50.0%
!! ACAATCCGAAGAGGGTGCTA+AGG - Chr1:16165203-16165222 MsG0180001113.01.T01:intron 50.0%
!! CTCAAGTGCTTCACCGGTTT+CGG - Chr1:16165146-16165165 MsG0180001113.01.T01:intron 50.0%
!! GCCCAACTTGTTAGGTCCAT+TGG + Chr1:16165774-16165793 None:intergenic 50.0%
!! GTCTGATGCTGGTCTTGGAA+TGG - Chr1:16166214-16166233 MsG0180001113.01.T01:intron 50.0%
ACAATGGAAGCCGCGGTTTC+TGG + Chr1:16164589-16164608 None:intergenic 55.0%
AGGCCAGCACTTTCCGAAAC+CGG + Chr1:16165162-16165181 None:intergenic 55.0%
CCGCGACCGTCAAATTTGAC+TGG - Chr1:16164751-16164770 MsG0180001113.01.T01:intron 55.0%
CGGCGAAAACCGCGACAAAA+CGG + Chr1:16164222-16164241 None:intergenic 55.0%
CTACATGTAGGAGGGTCCCA+CGG + Chr1:16167390-16167409 None:intergenic 55.0%
GAAGCTGCTGCCATAACTGC+TGG + Chr1:16167352-16167371 None:intergenic 55.0%
GACACAATGGACAAGGGTGG+TGG - Chr1:16166629-16166648 MsG0180001113.01.T01:intron 55.0%
GACACTTGAATCCGCGACTC+CGG + Chr1:16165831-16165850 None:intergenic 55.0%
GAGAATTCCGGGTTTGGCAC+CGG + Chr1:16165012-16165031 None:intergenic 55.0%
GGAGCAGTTTCCAGAAACCG+CGG - Chr1:16164576-16164595 MsG0180001113.01.T01:intron 55.0%
GGAGTCGCGGATTCAAGTGT+CGG - Chr1:16165830-16165849 MsG0180001113.01.T01:intron 55.0%
GGGGTGAAGGTAGGAGAACA+AGG - Chr1:16165740-16165759 MsG0180001113.01.T01:intron 55.0%
GGGTGCTAAGGAGATCAGGA+TGG - Chr1:16165215-16165234 MsG0180001113.01.T01:intron 55.0%
GTGGAGCTCAAGTGCTTCAC+CGG - Chr1:16165140-16165159 MsG0180001113.01.T01:intron 55.0%
GTTGGGCTCGAATTCAACGC+CGG - Chr1:16165787-16165806 MsG0180001113.01.T01:intron 55.0%
TTAGGCACAGTTTGCGCTGC+CGG + Chr1:16164982-16165001 None:intergenic 55.0%
TTTGATGCCGCAACAACCGC+AGG - Chr1:16165068-16165087 MsG0180001113.01.T01:intron 55.0%
! TTCGTATCCGGTGCCAAACC+CGG - Chr1:16165002-16165021 MsG0180001113.01.T01:intron 55.0%
!! TCACCGGTTTCGGAAAGTGC+TGG - Chr1:16165156-16165175 MsG0180001113.01.T01:intron 55.0%
ACTTGAATCCGCGACTCCGG+TGG + Chr1:16165828-16165847 None:intergenic 60.0%
AGACGTGTCATGACGCTCGC+CGG + Chr1:16165869-16165888 None:intergenic 60.0%
AGTCTCAGCTCCACCCCAAG+AGG - Chr1:16164787-16164806 MsG0180001113.01.T01:intron 60.0%
GAGCTCCACCCTAAAGCCAC+CGG - Chr1:16165809-16165828 MsG0180001113.01.T01:intron 60.0%
GCAGCAGCTTCTATCGCCGT+TGG - Chr1:16167361-16167380 MsG0180001113.01.T01:intron 60.0%
GTCTCAGCTCCACCCCAAGA+GGG - Chr1:16164788-16164807 MsG0180001113.01.T01:intron 60.0%
!! GTGGCTTTAGGGTGGAGCTC+CGG + Chr1:16165809-16165828 None:intergenic 60.0%
!! TAGCCTACGGTTCGGTCCGT+TGG - Chr1:16164158-16164177 MsG0180001113.01.T01:three_prime_UTR 60.0%
CATGTAGGAGGGTCCCACGG+AGG + Chr1:16167387-16167406 None:intergenic 65.0%
CCACCAACGGACCGAACCGT+AGG + Chr1:16164164-16164183 None:intergenic 65.0%
CCCTAAAGCCACCGGAGTCG+CGG - Chr1:16165817-16165836 MsG0180001113.01.T01:intron 65.0%
GGAAGTCTAACGCGTCGCGG+AGG - Chr1:16164710-16164729 MsG0180001113.01.T01:intron 65.0%
TCCGCGACTCCGGTGGCTTT+AGG + Chr1:16165821-16165840 None:intergenic 65.0%
! CCGCGACTCCGGTGGCTTTA+GGG + Chr1:16165820-16165839 None:intergenic 65.0%
! CTATCGCCGTTGGCCTCCGT+GGG - Chr1:16167371-16167390 MsG0180001113.01.T01:intron 65.0%
! TCTATCGCCGTTGGCCTCCG+TGG - Chr1:16167370-16167389 MsG0180001113.01.T01:intron 65.0%
!! CCTACGGTTCGGTCCGTTGG+TGG - Chr1:16164161-16164180 MsG0180001113.01.T01:three_prime_UTR 65.0%
!! CGACTCCGGTGGCTTTAGGG+TGG + Chr1:16165817-16165836 None:intergenic 65.0%
CGTGTCATGACGCTCGCCGG+AGG + Chr1:16165866-16165885 None:intergenic 70.0%
GAGGGTCCCACGGAGGCCAA+CGG + Chr1:16167380-16167399 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr1 gene 16163760 16169003 16163760 ID=MsG0180001113.01;Name=MsG0180001113.01
Chr1 mRNA 16163760 16169003 16163760 ID=MsG0180001113.01.T01;Parent=MsG0180001113.01;Name=MsG0180001113.01.T01;_AED=0.24;_eAED=0.24;_QI=331|1|1|1|1|1|6|546|621
Chr1 exon 16163760 16164372 16163760 ID=MsG0180001113.01.T01:exon:31219;Parent=MsG0180001113.01.T01
Chr1 exon 16164489 16164565 16164489 ID=MsG0180001113.01.T01:exon:31218;Parent=MsG0180001113.01.T01
Chr1 exon 16165343 16165500 16165343 ID=MsG0180001113.01.T01:exon:31217;Parent=MsG0180001113.01.T01
Chr1 exon 16166512 16166597 16166512 ID=MsG0180001113.01.T01:exon:31216;Parent=MsG0180001113.01.T01
Chr1 exon 16166785 16167070 16166785 ID=MsG0180001113.01.T01:exon:31215;Parent=MsG0180001113.01.T01
Chr1 exon 16167481 16169003 16167481 ID=MsG0180001113.01.T01:exon:31214;Parent=MsG0180001113.01.T01
Chr1 five_prime_UTR 16168673 16169003 16168673 ID=MsG0180001113.01.T01:five_prime_utr;Parent=MsG0180001113.01.T01
Chr1 CDS 16167481 16168672 16167481 ID=MsG0180001113.01.T01:cds;Parent=MsG0180001113.01.T01
Chr1 CDS 16166785 16167070 16166785 ID=MsG0180001113.01.T01:cds;Parent=MsG0180001113.01.T01
Chr1 CDS 16166512 16166597 16166512 ID=MsG0180001113.01.T01:cds;Parent=MsG0180001113.01.T01
Chr1 CDS 16165343 16165500 16165343 ID=MsG0180001113.01.T01:cds;Parent=MsG0180001113.01.T01
Chr1 CDS 16164489 16164565 16164489 ID=MsG0180001113.01.T01:cds;Parent=MsG0180001113.01.T01
Chr1 CDS 16164306 16164372 16164306 ID=MsG0180001113.01.T01:cds;Parent=MsG0180001113.01.T01
Chr1 three_prime_UTR 16163760 16164305 16163760 ID=MsG0180001113.01.T01:three_prime_utr;Parent=MsG0180001113.01.T01
Gene Sequence

>MsG0180001113.01.T01

ATGATAACACTAAAAGATCTTTACACTGTCTTAACAGCAGTGGTTCCATTATATGTTGCTATGATCTTAGCCTACGGTTCGGTCCGTTGGTGGAAGATTTTCTCACCGGATCAATGTTCCGGTATAAACCGTTTTGTCGCGGTTTTCGCCGTACCTCTCCTTTCATTCCACTTCATCTCAACCAACAATCCATATCAAATGAACTTCAGATTCATAGCTGCAGACACGCTTCAAAAAATCATCATGCTAGTAGCACTTTCATTATGGACATTGTTCACTAAAAATGGCAATTTAGAATGGATGATAACAATCTTTTCATTATCAACACTTCCTAACACTTTGGTTATGGGAATTCCTTTGTTAATTGCTATGTATGGTGATTATTCAGGTAGCTTAATGGTTCAAGTTGTGGTTCTTCAGTGTATTATTTGGTACACTCTTTTGCTTTTTCTTTTTGAGTACCGTGGTGCTAAGCTTTTAATCATGGAGCAGTTTCCAGAAACCGCGGCTTCCATTGTTTCCTTTAAGGTCGATTCGGATGTTATGTCGTTAGATGGAAGAGATTTTCTTGAAACTGATGCATCAGTTGGTGATGATGGGAAGTTACATGTTACTGTTAGGAAGTCTAACGCGTCGCGGAGGTCATTTATGATGAATACTCCGCGACCGTCAAATTTGACTGGAGCTGAGATTTATAGTCTCAGCTCCACCCCAAGAGGGTCTAATTTCAACCATCAGGAGTTTTACTCCATGATGGGTTATCAACCAAGACATTCCAATTTTGGGGCTAATGATTTGTATTCTGTCCAGTCTTCTTCTAGAGGACCAACTCCTAGACCTTCAAATTTCGAAGAAAATGGTGCAAGTTCTCCTAGATTCGGGTTTTATCCGGCAGCGCAAACTGTGCCTAATTCGTATCCGGTGCCAAACCCGGAATTCTCCTCTACTACTAAACCTGTGAAGAATCAGAATCAAAATTTGATGCCGCAACAACCGCAGGTTCAATTGCAGACAAAAGGTTCTCAGGATAAAGAGTTGCATATGTTTGTGTGGAGCTCAAGTGCTTCACCGGTTTCGGAAAGTGCTGGCCTCAATGTCTTCCGAAATTCGGAACAATCCGAAGAGGGTGCTAAGGAGATCAGGATGGTGGTGGCTGATGAACATAATCAAAATGGTGAAACCAATAACAAAGGTGGTCAAGAAAAGGAAATTGGTGGGGAAGAGGACTTCAAGTTCAATGGGGTGAAGGTAGGAGAACAAGGAGAAGGACCCAATGGACCTAACAAGTTGGGCTCGAATTCAACGCCGGAGCTCCACCCTAAAGCCACCGGAGTCGCGGATTCAAGTGTCGGAAAACTCATGCCTCCGGCGAGCGTCATGACACGTCTCATACTCATTATGGTTTGGAGGAAACTTATCCGTAATCCAAACACTTATTCAAGTCTCATTGGTCTTATTTGGTCCCTTGTTGCCTTTAGGTGGGATGTTCATATGCCTAAAATAATAGAGAAATCAATTTCCATACTGTCTGATGCTGGTCTTGGAATGGCTATGTTTAGCTTAGGTCTGTTTATGGCTCTTCAACCCAAGATCATTGCATGTGGGAATTCTGTTGCTTCATTTGCCATGGCTATAAGATTCCTTACTGGTCCAGCAGTTATGGCAGCAGCTTCTATCGCCGTTGGCCTCCGTGGGACCCTCCTACATGTAGCTATTGTTCAGGCTGCACTTCCACAAGGGATTGTTCCATTTGTGTTTGCAAAAGAGTACAATGTCCATCCAGCCATTCTTAGTACAGCGGTTATATTTGGTATGTTAATAGCCCTTCCAATTACTCTACTCTACTACATTCTCCTTGGTTTGTAA

Protein sequence

>MsG0180001113.01.T01

MITLKDLYTVLTAVVPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAVFAVPLLSFHFISTNNPYQMNFRFIAADTLQKIIMLVALSLWTLFTKNGNLEWMITIFSLSTLPNTLVMGIPLLIAMYGDYSGSLMVQVVVLQCIIWYTLLLFLFEYRGAKLLIMEQFPETAASIVSFKVDSDVMSLDGRDFLETDASVGDDGKLHVTVRKSNASRRSFMMNTPRPSNLTGAEIYSLSSTPRGSNFNHQEFYSMMGYQPRHSNFGANDLYSVQSSSRGPTPRPSNFEENGASSPRFGFYPAAQTVPNSYPVPNPEFSSTTKPVKNQNQNLMPQQPQVQLQTKGSQDKELHMFVWSSSASPVSESAGLNVFRNSEQSEEGAKEIRMVVADEHNQNGETNNKGGQEKEIGGEEDFKFNGVKVGEQGEGPNGPNKLGSNSTPELHPKATGVADSSVGKLMPPASVMTRLILIMVWRKLIRNPNTYSSLIGLIWSLVAFRWDVHMPKIIEKSISILSDAGLGMAMFSLGLFMALQPKIIACGNSVASFAMAIRFLTGPAVMAAASIAVGLRGTLLHVAIVQAALPQGIVPFVFAKEYNVHPAILSTAVIFGMLIALPITLLYYILLGL*