AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280011449.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280011449.01.T01 MTR_2g104550 74.453 274 29 7 135 369 13 284 1.57e-127 370
MsG0280011449.01.T01 MTR_2g104490 61.324 287 73 9 135 386 13 296 3.81e-100 300
MsG0280011449.01.T01 MTR_2g104490 63.333 270 62 8 135 369 13 280 6.12e-98 295
MsG0280011449.01.T01 MTR_4g009540 52.475 202 73 6 176 364 107 298 3.04e-55 184
MsG0280011449.01.T01 MTR_4g009540 49.537 216 86 6 176 378 107 312 3.14e-55 185
MsG0280011449.01.T01 MTR_4g009110 53.023 215 78 8 176 375 122 328 3.66e-54 183
MsG0280011449.01.T01 MTR_8g009020 45.622 217 87 6 162 364 91 290 3.28e-41 148
MsG0280011449.01.T01 MTR_8g009020 59.322 59 22 1 31 89 131 187 6.38e-13 69.7
MsG0280011449.01.T01 MTR_2g104560 89.189 74 6 1 1 72 10 83 4.96e-41 145
MsG0280011449.01.T01 MTR_2g104560 46.988 166 77 4 206 364 31 192 1.35e-35 130
MsG0280011449.01.T01 MTR_2g104500 44.700 217 101 9 176 389 63 263 1.49e-40 145
MsG0280011449.01.T01 MTR_2g104530 45.960 198 97 7 198 389 72 265 3.82e-40 144
MsG0280011449.01.T01 MTR_5g014600 47.619 189 77 6 202 368 118 306 4.89e-39 142
MsG0280011449.01.T01 MTR_5g014520 41.294 201 110 3 186 381 116 313 8.64e-37 137
MsG0280011449.01.T01 MTR_8g069740 42.396 217 102 7 156 364 54 255 2.35e-34 128
MsG0280011449.01.T01 MTR_7g080780 44.828 174 86 2 196 369 125 288 8.17e-33 125
MsG0280011449.01.T01 MTR_7g080780 44.828 174 86 2 196 369 138 301 1.06e-32 125
MsG0280011449.01.T01 MTR_4g092700 42.614 176 89 5 229 393 158 332 1.75e-32 125
MsG0280011449.01.T01 MTR_4g097940 47.436 156 79 3 212 364 138 293 2.09e-32 125
MsG0280011449.01.T01 MTR_2g010450 41.989 181 92 5 225 393 173 352 3.83e-32 124
MsG0280011449.01.T01 MTR_8g009010 47.619 147 45 2 219 364 124 239 3.39e-31 121
MsG0280011449.01.T01 MTR_8g009010 47.500 80 39 2 10 89 102 178 1.91e-12 68.2
MsG0280011449.01.T01 MTR_0250s0040 40.571 175 99 4 199 368 58 232 2.07e-30 117
MsG0280011449.01.T01 MTR_0246s0020 38.813 219 104 5 176 364 125 343 2.01e-29 117
MsG0280011449.01.T01 MTR_0246s0020 38.813 219 104 5 176 364 125 343 2.03e-29 117
MsG0280011449.01.T01 MTR_5g014640 42.282 149 84 1 218 364 143 291 2.29e-29 116
MsG0280011449.01.T01 MTR_4g097920 41.146 192 96 6 212 394 123 306 2.91e-29 115
MsG0280011449.01.T01 MTR_4g097920 41.146 192 96 6 212 394 138 321 4.96e-29 115
MsG0280011449.01.T01 MTR_4g067010 36.444 225 124 5 160 368 67 288 3.39e-28 113
MsG0280011449.01.T01 MTR_4g097950 41.243 177 87 4 195 355 33 208 3.82e-28 111
MsG0280011449.01.T01 MTR_6g047570 43.000 200 96 10 176 368 115 303 1.83e-27 111
MsG0280011449.01.T01 MTR_0011s0260 46.809 141 70 3 229 364 183 323 2.13e-27 112
MsG0280011449.01.T01 MTR_0011s0210 46.809 141 70 3 229 364 183 323 3.19e-27 111
MsG0280011449.01.T01 MTR_5g014560 39.130 184 99 5 186 364 96 271 4.79e-27 109
MsG0280011449.01.T01 MTR_2g104650 36.364 187 106 4 188 364 54 237 1.15e-26 108
MsG0280011449.01.T01 MTR_7g451650 43.590 156 72 4 219 368 23 168 5.15e-26 103
MsG0280011449.01.T01 MTR_7g451650 43.590 156 72 4 219 368 23 168 7.34e-26 103
MsG0280011449.01.T01 MTR_4g066460 36.364 209 123 3 159 364 91 292 1.68e-25 105
MsG0280011449.01.T01 MTR_2g104590 39.394 165 71 4 209 364 48 192 4.15e-25 102
MsG0280011449.01.T01 MTR_2g104590 40.594 101 47 5 5 93 28 127 6.31e-11 62.4
MsG0280011449.01.T01 MTR_0246s0050 36.207 174 93 3 196 364 124 284 6.07e-24 101
MsG0280011449.01.T01 MTR_4g098035 36.207 174 93 3 196 364 145 305 1.13e-23 101
MsG0280011449.01.T01 MTR_7g050350 48.276 116 45 3 258 368 1 106 3.43e-23 94.7
MsG0280011449.01.T01 MTR_7g451650 48.276 116 45 3 258 368 1 106 3.43e-23 94.7
MsG0280011449.01.T01 MTR_4g009420 44.538 119 53 2 250 368 63 168 7.11e-21 90.1
MsG0280011449.01.T01 MTR_4g009420 44.538 119 53 2 250 368 63 168 8.22e-21 89.7
MsG0280011449.01.T01 MTR_4g066380 38.690 168 99 3 199 364 124 289 2.90e-20 91.3
MsG0280011449.01.T01 MTR_4g009510 42.963 135 60 5 240 368 53 176 5.56e-19 85.1
MsG0280011449.01.T01 MTR_6g047550 58.209 67 27 1 229 294 173 239 5.59e-16 77.8
MsG0280011449.01.T01 MTR_8g024790 27.941 204 127 8 165 360 237 428 3.34e-14 74.3
MsG0280011449.01.T01 MTR_5g014550 37.600 125 67 3 259 375 54 175 6.20e-14 70.5
MsG0280011449.01.T01 MTR_1g072320 27.222 180 112 4 194 355 431 609 6.45e-14 73.9
MsG0280011449.01.T01 MTR_8g027495 35.780 109 63 3 228 334 457 560 3.21e-13 71.6
MsG0280011449.01.T01 MTR_7g117670 35.514 107 66 2 228 334 401 504 3.40e-13 71.6
MsG0280011449.01.T01 MTR_8g067280 30.247 162 92 4 218 360 450 609 1.10e-12 70.1
MsG0280011449.01.T01 MTR_1g112680 36.283 113 65 2 181 291 272 379 2.44e-11 65.5
MsG0280011449.01.T01 MTR_5g030430 29.697 165 89 6 218 360 481 640 2.50e-11 65.9
MsG0280011449.01.T01 MTR_7g096350 45.714 70 36 2 218 285 343 412 4.35e-11 64.7
MsG0280011449.01.T01 MTR_8g024770 23.563 174 121 5 197 360 248 419 6.71e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280011449.01.T01 AT4G37850 41.327 196 100 5 180 367 109 297 1.19e-35 133
MsG0280011449.01.T01 AT4G37850 41.327 196 100 5 180 367 109 297 1.19e-35 133
MsG0280011449.01.T01 AT2G22760 40.000 175 90 4 221 381 111 284 2.11e-29 115
MsG0280011449.01.T01 AT2G22760 43.137 153 77 3 221 364 111 262 4.81e-28 112
MsG0280011449.01.T01 AT2G22750 43.506 154 77 2 221 364 118 271 8.92e-27 108
MsG0280011449.01.T01 AT2G22750 43.506 154 77 2 221 364 118 271 9.03e-27 108
MsG0280011449.01.T01 AT2G22750 43.506 154 77 2 221 364 146 299 9.95e-27 109
MsG0280011449.01.T01 AT2G22750 43.506 154 77 2 221 364 146 299 1.02e-26 109
MsG0280011449.01.T01 AT2G22750 43.506 154 77 2 221 364 142 295 1.08e-26 109
MsG0280011449.01.T01 AT2G22770 33.645 214 115 4 187 375 87 298 1.26e-22 97.8
MsG0280011449.01.T01 AT4G09820 36.691 139 73 2 219 357 353 476 1.72e-17 84.7
MsG0280011449.01.T01 AT3G61950 32.867 143 79 4 225 355 124 261 1.38e-14 74.3
MsG0280011449.01.T01 AT3G61950 32.867 143 79 4 225 355 175 312 1.77e-14 74.3
MsG0280011449.01.T01 AT4G17880 24.885 217 157 3 149 360 337 552 1.87e-14 75.5
MsG0280011449.01.T01 AT3G61950 32.867 143 79 4 225 355 124 261 2.40e-14 73.6
MsG0280011449.01.T01 AT3G61950 32.867 143 79 4 225 355 175 312 2.91e-14 73.9
MsG0280011449.01.T01 AT2G46510 33.621 116 63 2 218 332 383 485 2.49e-13 72.0
MsG0280011449.01.T01 AT5G46760 27.879 165 107 3 207 360 392 555 5.90e-13 70.9
MsG0280011449.01.T01 AT1G32640 29.139 151 98 4 218 360 440 589 7.05e-13 70.5
MsG0280011449.01.T01 AT1G63650 30.667 150 77 5 229 353 405 552 2.78e-12 68.9
MsG0280011449.01.T01 AT1G63650 30.667 150 77 5 229 353 405 552 2.78e-12 68.9
MsG0280011449.01.T01 AT1G63650 30.667 150 77 5 229 353 405 552 2.78e-12 68.9
MsG0280011449.01.T01 AT1G12860 32.624 141 76 5 230 355 268 404 4.19e-11 64.7
MsG0280011449.01.T01 AT1G01260 39.437 71 42 1 218 287 421 491 4.71e-11 65.1
MsG0280011449.01.T01 AT1G01260 39.437 71 42 1 218 287 421 491 4.71e-11 65.1
MsG0280011449.01.T01 AT1G01260 39.437 71 42 1 218 287 421 491 4.71e-11 65.1
MsG0280011449.01.T01 AT1G12860 32.624 141 76 5 230 355 268 404 5.33e-11 64.3

Find 63 sgRNAs with CRISPR-Local

Find 382 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTACTTCTTGTTCTGATTC+TGG 0.178025 2:-84153036 None:intergenic
CTACTTCTACTCTTTGTTCT+TGG 0.252338 2:-84153057 None:intergenic
CAGAAGCATCCAACAATAAT+AGG 0.297499 2:+84147412 MsG0280011449.01.T01:CDS
ACATAATGTCAGAGAGAAAA+AGG 0.300304 2:+84147515 MsG0280011449.01.T01:CDS
GCACTTTCAGCTACTATTCC+TGG 0.324686 2:+84153213 MsG0280011449.01.T01:CDS
TGCCAGCAGTGTATTTCCTT+TGG 0.326073 2:+84155002 MsG0280011449.01.T01:CDS
TCAGTGTTTGGATCACATTA+TGG 0.344284 2:+84153149 MsG0280011449.01.T01:CDS
TTTCCATGTGTAGCAGCATT+AGG 0.345086 2:-84147454 None:intergenic
GAACAATGTCCTATTATTGT+TGG 0.353321 2:-84147421 None:intergenic
TGTAGTAGTAGCTGGTATTA+TGG 0.362086 2:-84153013 None:intergenic
GCCAGCAGTGTATTTCCTTT+GGG 0.362485 2:+84155003 MsG0280011449.01.T01:CDS
TAGAAGTGGTTCTCAGTGTT+TGG 0.364117 2:+84153137 MsG0280011449.01.T01:CDS
ATCCACTGTGAGAAGGAAAA+TGG 0.369029 2:+84154928 MsG0280011449.01.T01:CDS
AATACTCTTGCTTTAACATC+AGG 0.372630 2:-84154883 None:intergenic
AAGTAGTAATAAGAGGAGTT+TGG 0.386060 2:+84153074 MsG0280011449.01.T01:CDS
TGGCTTCACTATTGTTGCTC+AGG 0.404693 2:+84155037 MsG0280011449.01.T01:CDS
TCCTTTGGGAATTCAACTCT+TGG 0.405504 2:+84155017 MsG0280011449.01.T01:CDS
AGAGAGATTCATAGCACTTT+CGG 0.417342 2:+84147552 MsG0280011449.01.T01:CDS
GGCAGATGGGTGAGGAATAC+AGG 0.417383 2:+84148925 MsG0280011449.01.T01:intron
ATTGATGACAAAGTTGAAAC+AGG 0.417457 2:+84148962 MsG0280011449.01.T01:CDS
AGAGTAGAAGTAGTAATAAG+AGG 0.424376 2:+84153067 MsG0280011449.01.T01:CDS
CTACACATGGAAAGAATAAG+AGG 0.462322 2:+84147464 MsG0280011449.01.T01:CDS
TTCTACTCTTCTTTCCACTT+TGG 0.465419 2:-84153119 None:intergenic
GATTCTGGTGTAGTAGTAGC+TGG 0.465607 2:-84153021 None:intergenic
ATTATTACCTTCTTCAAGCC+AGG 0.465921 2:-84153231 None:intergenic
AGAACGTGTGAAGGAGTTAG+AGG 0.469057 2:+84154759 MsG0280011449.01.T01:CDS
TGTTGGATGCTTCTGATTGA+AGG 0.471742 2:-84147404 None:intergenic
TTAACATCAGGGAGTGATGA+TGG 0.473088 2:-84154871 None:intergenic
AAAGAGAGAATGAATGTCCT+TGG 0.478479 2:-84152980 None:intergenic
AAATGACACAAATTCTGATC+AGG 0.480808 2:+84154837 MsG0280011449.01.T01:CDS
GATTGCTTCACCAAGTATAG+AGG 0.505445 2:-84154716 None:intergenic
TGATGTTAAAGCAAGAGTAT+TGG 0.512297 2:+84154885 MsG0280011449.01.T01:CDS
TACTATTCCTGGCTTGAAGA+AGG 0.517604 2:+84153224 MsG0280011449.01.T01:CDS
TTTACTCGTGGCCTCTGAGC+TGG 0.525686 2:+84151551 MsG0280011449.01.T01:CDS
TATGATACCCGGCTTGAAGA+AGG 0.532421 2:+84147576 MsG0280011449.01.T01:CDS
GCACTTTCGGCTATGATACC+CGG 0.547609 2:+84147565 MsG0280011449.01.T01:CDS
GGAACTGACCTTCTTCAAGC+CGG 0.556400 2:-84147584 None:intergenic
GTGCCTAATGCTGCTACACA+TGG 0.559444 2:+84147451 MsG0280011449.01.T01:CDS
ATGGACAAGACCTCTATACT+TGG 0.562754 2:+84154706 MsG0280011449.01.T01:CDS
TAAGAGGGTGAGAAGCTCAT+GGG 0.563045 2:+84147480 MsG0280011449.01.T01:CDS
AGTGGAAAGAAGAGTAGAAG+TGG 0.563816 2:+84153123 MsG0280011449.01.T01:CDS
TCCCAAAGGAAATACACTGC+TGG 0.565728 2:-84155004 None:intergenic
TGCTCAGGAGACTTTACTCG+TGG 0.571113 2:+84151539 MsG0280011449.01.T01:CDS
ATAAGAGGGTGAGAAGCTCA+TGG 0.579940 2:+84147479 MsG0280011449.01.T01:CDS
GAACTGACCTTCTTCAAGCC+GGG 0.582458 2:-84147583 None:intergenic
GCAAAAGCTAGTAACCAAAG+TGG 0.590525 2:+84153105 MsG0280011449.01.T01:CDS
GGAGTGGACGGTGTTGATGA+AGG 0.594219 2:-84152959 None:intergenic
GTTGATGTAGAGAATATGCA+AGG 0.598569 2:+84152793 MsG0280011449.01.T01:CDS
AGTTAGAGGAACGGAACAAG+AGG 0.599418 2:+84154773 MsG0280011449.01.T01:CDS
CATTGAGATCCACTGTGAGA+AGG 0.599535 2:+84154921 MsG0280011449.01.T01:CDS
GAGAATGAATGTCCTTGGAG+TGG 0.602643 2:-84152975 None:intergenic
AGAAGCTCATGGGAGATACA+AGG 0.603853 2:+84147490 MsG0280011449.01.T01:CDS
ATACTCTTGCTTTAACATCA+GGG 0.612633 2:-84154882 None:intergenic
CATCAACACCGTCCACTCCA+AGG 0.620000 2:+84152963 MsG0280011449.01.T01:CDS
ATGAATGTCCTTGGAGTGGA+CGG 0.625719 2:-84152971 None:intergenic
CTATTGTTGCTCAGGTACGT+AGG 0.638907 2:+84155045 MsG0280011449.01.T01:CDS
ACTACTTCAAGAACGTGTGA+AGG 0.641075 2:+84154750 MsG0280011449.01.T01:CDS
TACACATGGAAAGAATAAGA+GGG 0.651853 2:+84147465 MsG0280011449.01.T01:CDS
TTTGGAAAGGACATTCAACA+TGG 0.654139 2:-84151491 None:intergenic
GCCAAGAGTTGAATTCCCAA+AGG 0.663433 2:-84155018 None:intergenic
ATCATATCTTACCAGCTCAG+AGG 0.676078 2:-84151562 None:intergenic
GTGTGAAGGAGTTAGAGGAA+CGG 0.690708 2:+84154764 MsG0280011449.01.T01:CDS
TTGATGTAGAGAATATGCAA+GGG 0.725229 2:+84152794 MsG0280011449.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAACAATATATTTACTT+TGG + Chr2:84154528-84154547 MsG0280011449.01.T01:intron 10.0%
!! AAAAAATTATCTCTAATAAA+AGG - Chr2:84151040-84151059 None:intergenic 10.0%
!! ATAAATGTTATTATTACAAT+AGG + Chr2:84152765-84152784 MsG0280011449.01.T01:intron 10.0%
!! ATTAAATAATAAATTAACAC+AGG + Chr2:84148075-84148094 MsG0280011449.01.T01:intron 10.0%
!! ATTTATTCAAAAATTAAATC+AGG - Chr2:84152751-84152770 None:intergenic 10.0%
!! TGTTTACTAAAAATAAATAA+AGG + Chr2:84154315-84154334 MsG0280011449.01.T01:intron 10.0%
!! TTTATTCAAAAATTAAATCA+GGG - Chr2:84152750-84152769 None:intergenic 10.0%
!! AAAAACAATTATTGTAATTG+TGG - Chr2:84152357-84152376 None:intergenic 15.0%
!! ACAATAAAATTGTTTATGAT+AGG - Chr2:84149593-84149612 None:intergenic 15.0%
!! AGATTTAATTAGTAAAATAG+AGG - Chr2:84151347-84151366 None:intergenic 15.0%
!! TACTAAAAATAAATAAAGGA+TGG + Chr2:84154319-84154338 MsG0280011449.01.T01:intron 15.0%
!! TTATTGTTTAAGAATCTATT+AGG + Chr2:84149509-84149528 MsG0280011449.01.T01:intron 15.0%
!! TTGATAAAATGTTAATTACA+TGG + Chr2:84148893-84148912 MsG0280011449.01.T01:intron 15.0%
!!! AAATTACATTTTTTTAGACT+TGG - Chr2:84150796-84150815 None:intergenic 15.0%
!!! AATAACTTTTTATAATGGAT+AGG + Chr2:84147697-84147716 MsG0280011449.01.T01:intron 15.0%
!!! AGAAATTTACCTTTTTTTTA+AGG + Chr2:84150678-84150697 MsG0280011449.01.T01:intron 15.0%
!!! ATAATTAAGCTTGTTAATTT+TGG - Chr2:84147941-84147960 None:intergenic 15.0%
!!! ATATTTTGTGACTAAATTAA+AGG - Chr2:84149344-84149363 None:intergenic 15.0%
!!! GAAATTTTTAATAGAGATTA+TGG - Chr2:84148590-84148609 None:intergenic 15.0%
!!! GAATAATTTTGTTTTTTTGA+AGG + Chr2:84154091-84154110 MsG0280011449.01.T01:intron 15.0%
!!! TATTTTGTGACTAAATTAAA+GGG - Chr2:84149343-84149362 None:intergenic 15.0%
!!! TGTGATTTTCTTATTATTAA+TGG - Chr2:84153736-84153755 None:intergenic 15.0%
!!! TTTTTTATTTGTATTCTTTC+AGG + Chr2:84150013-84150032 MsG0280011449.01.T01:intron 15.0%
!! AAACATGGAAATACTAAATA+TGG + Chr2:84147653-84147672 MsG0280011449.01.T01:intron 20.0%
!! AAATAAAGAGTGAGAATAAA+AGG + Chr2:84148272-84148291 MsG0280011449.01.T01:intron 20.0%
!! AATAAAAATTGATGTTCTGT+CGG + Chr2:84154185-84154204 MsG0280011449.01.T01:intron 20.0%
!! AATAAAGAGTGAGAATAAAA+GGG + Chr2:84148273-84148292 MsG0280011449.01.T01:intron 20.0%
!! AATTTAAATATGCATTCCAT+TGG + Chr2:84151770-84151789 MsG0280011449.01.T01:intron 20.0%
!! AATTTAGTATAACTATGTGT+TGG + Chr2:84153776-84153795 MsG0280011449.01.T01:intron 20.0%
!! ACAAATTTGTAGGTTATTAT+TGG - Chr2:84150060-84150079 None:intergenic 20.0%
!! AGTTTATTACGCATTATTAA+CGG - Chr2:84150156-84150175 None:intergenic 20.0%
!! ATAAATGCAATGTATCATAA+TGG - Chr2:84152433-84152452 None:intergenic 20.0%
!! ATACTCTATATTATTACAAG+TGG + Chr2:84154042-84154061 MsG0280011449.01.T01:intron 20.0%
!! ATCATAATTCGATGTAAAAT+TGG + Chr2:84151276-84151295 MsG0280011449.01.T01:intron 20.0%
!! CTCAAAATATAAGCAAAAAT+TGG + Chr2:84149113-84149132 MsG0280011449.01.T01:intron 20.0%
!! CTGCATAAATTAATAATAGA+TGG + Chr2:84154687-84154706 MsG0280011449.01.T01:intron 20.0%
!! GAATTTCTTCCTTAAAAAAA+AGG - Chr2:84150690-84150709 None:intergenic 20.0%
!! GACATAAAATAAATTAACAC+AGG + Chr2:84148005-84148024 MsG0280011449.01.T01:intron 20.0%
!! TAAAGGGAAAATGATAATTT+AGG - Chr2:84149327-84149346 None:intergenic 20.0%
!! TATAATTCTTGAATTTCTTG+TGG + Chr2:84150216-84150235 MsG0280011449.01.T01:intron 20.0%
!! TTGTTGATCATAATGATTTA+CGG - Chr2:84152691-84152710 None:intergenic 20.0%
!! TTTAACAAATTGTCCTATTA+TGG - Chr2:84150569-84150588 None:intergenic 20.0%
!!! AAAAAAATATTGGGTTTGTT+TGG - Chr2:84150611-84150630 None:intergenic 20.0%
!!! ACCAATTTTTGCTTATATTT+TGG + Chr2:84149193-84149212 MsG0280011449.01.T01:intron 20.0%
!!! ATATTGACTTCTTTTCTTTT+GGG + Chr2:84154560-84154579 MsG0280011449.01.T01:intron 20.0%
!!! CCAATTTTTGCTTATATTTT+GGG + Chr2:84149194-84149213 MsG0280011449.01.T01:intron 20.0%
!!! GTTTTTCTTATATACCTTTA+AGG - Chr2:84150517-84150536 None:intergenic 20.0%
!!! TAATGGCTAACATTAATTTT+GGG + Chr2:84153307-84153326 MsG0280011449.01.T01:intron 20.0%
!!! TTAATGGCTAACATTAATTT+TGG + Chr2:84153306-84153325 MsG0280011449.01.T01:intron 20.0%
!!! TTAATTACATGGATTTTATG+TGG + Chr2:84148904-84148923 MsG0280011449.01.T01:intron 20.0%
!!! TTTTATTTTTTCACTACGTA+TGG - Chr2:84154157-84154176 None:intergenic 20.0%
!!! TTTTTACACTCTTAAGTTTT+AGG + Chr2:84148392-84148411 MsG0280011449.01.T01:intron 20.0%
! AAGGTATATAAGAAAAACGT+GGG + Chr2:84150519-84150538 MsG0280011449.01.T01:intron 25.0%
! AAGTAAAACAACATCAAACT+TGG + Chr2:84154406-84154425 MsG0280011449.01.T01:intron 25.0%
! AATTTGTAGGTTATTATTGG+AGG - Chr2:84150057-84150076 None:intergenic 25.0%
! ATAGCAAAAAATGTTGTCAA+TGG + Chr2:84149773-84149792 MsG0280011449.01.T01:intron 25.0%
! ATATATTGAAGAAGAATTGC+AGG - Chr2:84147608-84147627 None:intergenic 25.0%
! CAAATTTGTCTTCTTCATAA+TGG + Chr2:84150071-84150090 MsG0280011449.01.T01:intron 25.0%
! CCCAAAATATAAGCAAAAAT+TGG - Chr2:84149197-84149216 None:intergenic 25.0%
! GAAATTCACCTTCTAATTAT+TGG + Chr2:84150703-84150722 MsG0280011449.01.T01:intron 25.0%
! GAAATTGAGAGACTAAAAAA+TGG + Chr2:84151206-84151225 MsG0280011449.01.T01:intron 25.0%
! GATTAGTACTACTAGTAATT+TGG - Chr2:84151837-84151856 None:intergenic 25.0%
! GGTGATACGAAAAAAATATT+GGG - Chr2:84150620-84150639 None:intergenic 25.0%
! GTTATTATTACAATAGGAAG+TGG + Chr2:84152771-84152790 MsG0280011449.01.T01:intron 25.0%
! TAAGACAACAAAACAAACAA+TGG + Chr2:84154371-84154390 MsG0280011449.01.T01:intron 25.0%
! TAGAGAGATGTCTATATATT+AGG + Chr2:84151084-84151103 MsG0280011449.01.T01:intron 25.0%
! TAGCAAAAAATGTTGTCAAT+GGG + Chr2:84149774-84149793 MsG0280011449.01.T01:intron 25.0%
! TATGAAGAAGACAAATTTGT+AGG - Chr2:84150070-84150089 None:intergenic 25.0%
! TCAACAAAAGCTAATGTATT+TGG - Chr2:84149174-84149193 None:intergenic 25.0%
! TCTTGAATTGGATTTGAATA+TGG - Chr2:84153980-84153999 None:intergenic 25.0%
! TGGTGATACGAAAAAAATAT+TGG - Chr2:84150621-84150640 None:intergenic 25.0%
! TGTAAATGTTGCAAAAGAAT+AGG - Chr2:84149747-84149766 None:intergenic 25.0%
! TTGATTAAGATGATATGTTC+AGG - Chr2:84150951-84150970 None:intergenic 25.0%
! TTTACTTGTATAGATAGACA+AGG + Chr2:84148462-84148481 MsG0280011449.01.T01:intron 25.0%
! TTTATTATGAACTCAGAGTT+TGG + Chr2:84153640-84153659 MsG0280011449.01.T01:intron 25.0%
!! AAAGGTATATAAGAAAAACG+TGG + Chr2:84150518-84150537 MsG0280011449.01.T01:intron 25.0%
!! AGTTATAGTTCTTTAAGAGT+TGG + Chr2:84149039-84149058 MsG0280011449.01.T01:intron 25.0%
!! CTAAATATGGATTAAACATG+AGG + Chr2:84147666-84147685 MsG0280011449.01.T01:intron 25.0%
!! GTTATCGATTGTTAACAAAA+TGG - Chr2:84150641-84150660 None:intergenic 25.0%
!! GTTGAAGAAAAGAATTGTTT+TGG + Chr2:84150444-84150463 MsG0280011449.01.T01:intron 25.0%
!! TACTTTTCTATACGTCTTTT+GGG - Chr2:84151393-84151412 None:intergenic 25.0%
!! TTCAAGCATTTTTGTTGATA+AGG + Chr2:84148324-84148343 MsG0280011449.01.T01:intron 25.0%
!! TTTTATCGCATTTACGTTTT+TGG - Chr2:84150989-84151008 None:intergenic 25.0%
!!! AAGAATTGTTTTGGCAATAT+TGG + Chr2:84150453-84150472 MsG0280011449.01.T01:intron 25.0%
!!! AAGGCAATTTTATTTACTAG+CGG - Chr2:84150106-84150125 None:intergenic 25.0%
!!! ATTGACAACTTGTTTTTCAA+GGG + Chr2:84149939-84149958 MsG0280011449.01.T01:intron 25.0%
!!! ATTTTTTTAGACTTGGTCTT+GGG - Chr2:84150789-84150808 None:intergenic 25.0%
!!! GATATTGACTTCTTTTCTTT+TGG + Chr2:84154559-84154578 MsG0280011449.01.T01:intron 25.0%
!!! GCATATATGTGCTATTTTAA+TGG + Chr2:84153290-84153309 MsG0280011449.01.T01:intron 25.0%
!!! GTTTTTTGTAGATCAAAACA+TGG + Chr2:84147638-84147657 MsG0280011449.01.T01:intron 25.0%
!!! TGTCTTGTTCTTTTAAAGTA+AGG - Chr2:84147836-84147855 None:intergenic 25.0%
!!! TTTTTGCTTATATTTTGGGA+CGG + Chr2:84149198-84149217 MsG0280011449.01.T01:intron 25.0%
AAAATTAGTTGTCGTCTTAC+TGG - Chr2:84149992-84150011 None:intergenic 30.0%
AAACATTACCTTAGCAATGA+TGG - Chr2:84148832-84148851 None:intergenic 30.0%
AAATGACACAAATTCTGATC+AGG + Chr2:84154837-84154856 MsG0280011449.01.T01:CDS 30.0%
AAGAATTTAGAGAACCAAAG+AGG - Chr2:84151651-84151670 None:intergenic 30.0%
AAGTAGTAATAAGAGGAGTT+TGG + Chr2:84153074-84153093 MsG0280011449.01.T01:CDS 30.0%
AATACTCTTGCTTTAACATC+AGG - Chr2:84154886-84154905 None:intergenic 30.0%
ACAAAACACATTTCTTCTCA+TGG + Chr2:84152566-84152585 MsG0280011449.01.T01:intron 30.0%
ACATAATGTCAGAGAGAAAA+AGG + Chr2:84147515-84147534 MsG0280011449.01.T01:CDS 30.0%
ACCAAAATTCCTCAAGTTTA+TGG + Chr2:84151302-84151321 MsG0280011449.01.T01:intron 30.0%
AGAATTTAGAGAACCAAAGA+GGG - Chr2:84151650-84151669 None:intergenic 30.0%
AGAGAAAAAGACGATTGATT+TGG - Chr2:84151611-84151630 None:intergenic 30.0%
AGAGTAGAAGTAGTAATAAG+AGG + Chr2:84153067-84153086 MsG0280011449.01.T01:CDS 30.0%
AGATTTGGATTCTCTTGAAT+TGG - Chr2:84153992-84154011 None:intergenic 30.0%
ATACTATGATCCAGTATGAT+TGG - Chr2:84151749-84151768 None:intergenic 30.0%
ATACTCTTGCTTTAACATCA+GGG - Chr2:84154885-84154904 None:intergenic 30.0%
ATCGAATTATGATAACTCGT+AGG - Chr2:84151269-84151288 None:intergenic 30.0%
ATTATGACATGTGACTTATG+AGG + Chr2:84148361-84148380 MsG0280011449.01.T01:intron 30.0%
ATTTGTCTTCTTCATAATGG+TGG + Chr2:84150074-84150093 MsG0280011449.01.T01:intron 30.0%
CACATTGTATAATGCTATAC+GGG + Chr2:84152294-84152313 MsG0280011449.01.T01:intron 30.0%
CAGTCGAAAGTAATTAATGT+TGG + Chr2:84152459-84152478 MsG0280011449.01.T01:intron 30.0%
CCACATTGTATAATGCTATA+CGG + Chr2:84152293-84152312 MsG0280011449.01.T01:intron 30.0%
CGTATAGCATTATACAATGT+GGG - Chr2:84152295-84152314 None:intergenic 30.0%
CTCTCTATCACTATAAGATT+TGG - Chr2:84154007-84154026 None:intergenic 30.0%
CTTACTCAAATCTGTATAAG+AGG - Chr2:84149556-84149575 None:intergenic 30.0%
GAACAATGTCCTATTATTGT+TGG - Chr2:84147424-84147443 None:intergenic 30.0%
GAATCCAAATTATCATTACG+TGG - Chr2:84148621-84148640 None:intergenic 30.0%
GACATGCTTATCTATCTAAA+TGG + Chr2:84151181-84151200 MsG0280011449.01.T01:intron 30.0%
GATACTTATAGTAGTAGTTG+AGG - Chr2:84154643-84154662 None:intergenic 30.0%
GCTAGTAAATAAAATTGCCT+TGG + Chr2:84150105-84150124 MsG0280011449.01.T01:intron 30.0%
GTAAATGTGAGTAACAAAGA+AGG + Chr2:84147983-84148002 MsG0280011449.01.T01:intron 30.0%
GTCATTGAATCAAAATCAGA+GGG + Chr2:84150867-84150886 MsG0280011449.01.T01:intron 30.0%
TACACATGGAAAGAATAAGA+GGG + Chr2:84147465-84147484 MsG0280011449.01.T01:CDS 30.0%
TAGACACTCCAATAATTAGA+AGG - Chr2:84150714-84150733 None:intergenic 30.0%
TATATAAGAAAAACGTGGGA+AGG + Chr2:84150523-84150542 MsG0280011449.01.T01:intron 30.0%
TATATGTTGACCATCATAGA+TGG - Chr2:84153411-84153430 None:intergenic 30.0%
TCATCCACGTAATGATAATT+TGG + Chr2:84148614-84148633 MsG0280011449.01.T01:intron 30.0%
TCATCTTAATCAAACGAATG+TGG + Chr2:84150958-84150977 MsG0280011449.01.T01:intron 30.0%
TTATTACTAGTAACGCAAGT+CGG - Chr2:84151889-84151908 None:intergenic 30.0%
TTGATGTAGAGAATATGCAA+GGG + Chr2:84152794-84152813 MsG0280011449.01.T01:CDS 30.0%
TTTATCATCTTCTAGTGAGA+TGG + Chr2:84152904-84152923 MsG0280011449.01.T01:intron 30.0%
TTTGTTACTCACATTTACAG+AGG - Chr2:84147981-84148000 None:intergenic 30.0%
! ACCATAAACTTGAGGAATTT+TGG - Chr2:84151306-84151325 None:intergenic 30.0%
! ATTGATGACAAAGTTGAAAC+AGG + Chr2:84148962-84148981 MsG0280011449.01.T01:CDS 30.0%
! GTACTTTTCTATACGTCTTT+TGG - Chr2:84151394-84151413 None:intergenic 30.0%
! GTATTGGTAGGAATCTTATA+TGG - Chr2:84152237-84152256 None:intergenic 30.0%
! TAAGTTTGAGTTCTTATGCT+TGG - Chr2:84147915-84147934 None:intergenic 30.0%
! TACTACTAGTAATTTGGAGT+GGG - Chr2:84151831-84151850 None:intergenic 30.0%
! TCAAATGATAGTGATAGTGT+AGG + Chr2:84149471-84149490 MsG0280011449.01.T01:intron 30.0%
! TGAAACGAAGCTTTTCAATT+TGG - Chr2:84151512-84151531 None:intergenic 30.0%
! TGATGTTAAAGCAAGAGTAT+TGG + Chr2:84154885-84154904 MsG0280011449.01.T01:CDS 30.0%
!! AAAGCTAAAAAGCATTGTCA+AGG + Chr2:84149817-84149836 MsG0280011449.01.T01:intron 30.0%
!! AAGCTAAAAAGCATTGTCAA+GGG + Chr2:84149818-84149837 MsG0280011449.01.T01:intron 30.0%
!! CATTGACAACTTGTTTTTCA+AGG + Chr2:84149938-84149957 MsG0280011449.01.T01:intron 30.0%
!! TAGTTTTGCACTTGTTGATA+TGG + Chr2:84150390-84150409 MsG0280011449.01.T01:intron 30.0%
!! TATCTTTTTGTTTGTGTGTG+TGG - Chr2:84149629-84149648 None:intergenic 30.0%
!! TCTAGAATTTTGTTAGGCTA+TGG - Chr2:84152185-84152204 None:intergenic 30.0%
!! TTGGCTTCTAAAATTAGTGA+GGG + Chr2:84150124-84150143 MsG0280011449.01.T01:intron 30.0%
!! TTGTACACAAATCACTTTTG+TGG - Chr2:84154819-84154838 None:intergenic 30.0%
!!! CATTTTTTTAGACTTGGTCT+TGG - Chr2:84150790-84150809 None:intergenic 30.0%
!!! GAGACTTCTAGAATTTTGTT+AGG - Chr2:84152191-84152210 None:intergenic 30.0%
!!! TGCTTATATTTTGAGACAGA+GGG - Chr2:84149108-84149127 None:intergenic 30.0%
!!! TGTTGTTTTACTTCTCATCT+TGG - Chr2:84154399-84154418 None:intergenic 30.0%
!!! TTGACAACTTGTTTTTCAAG+GGG + Chr2:84149940-84149959 MsG0280011449.01.T01:intron 30.0%
!!! TTGAGGGTATTTTTTCCAAA+TGG - Chr2:84148804-84148823 None:intergenic 30.0%
!!! TTGCTTATATTTTGAGACAG+AGG - Chr2:84149109-84149128 None:intergenic 30.0%
AAAGAGAGAATGAATGTCCT+TGG - Chr2:84152983-84153002 None:intergenic 35.0%
AAGTCTCTACATCTACATGA+TGG + Chr2:84152204-84152223 MsG0280011449.01.T01:intron 35.0%
AGAGAGATTCATAGCACTTT+CGG + Chr2:84147552-84147571 MsG0280011449.01.T01:CDS 35.0%
AGTTAGCATAAACAAACGAG+TGG - Chr2:84153435-84153454 None:intergenic 35.0%
ATAGACAAGGTTTCTGTACT+TGG + Chr2:84148475-84148494 MsG0280011449.01.T01:intron 35.0%
ATATAGACATCTCTCTCGAT+TGG + Chr2:84151139-84151158 MsG0280011449.01.T01:intron 35.0%
ATATTCCATGCTTACCTTGT+GGG + Chr2:84150261-84150280 MsG0280011449.01.T01:intron 35.0%
ATGACAACGCTTCATTAGAT+AGG + Chr2:84149653-84149672 MsG0280011449.01.T01:intron 35.0%
ATGCCAAAAGAATGCTTTCT+AGG + Chr2:84150188-84150207 MsG0280011449.01.T01:intron 35.0%
ATTATTACCTTCTTCAAGCC+AGG - Chr2:84153234-84153253 None:intergenic 35.0%
ATTGAGATGAGACATGGTAT+TGG - Chr2:84152253-84152272 None:intergenic 35.0%
ATTTGGTCCCTAAACAGAAA+AGG - Chr2:84151594-84151613 None:intergenic 35.0%
CAACATTACCATCATTGCTA+AGG + Chr2:84148821-84148840 MsG0280011449.01.T01:intron 35.0%
CAAGTGCAAAACTAGCAATA+AGG - Chr2:84150384-84150403 None:intergenic 35.0%
CCGTATAGCATTATACAATG+TGG - Chr2:84152296-84152315 None:intergenic 35.0%
CTACACATGGAAAGAATAAG+AGG + Chr2:84147464-84147483 MsG0280011449.01.T01:CDS 35.0%
CTACTTCTACTCTTTGTTCT+TGG - Chr2:84153060-84153079 None:intergenic 35.0%
CTGTCCGTAGTATTCATAAT+GGG - Chr2:84151245-84151264 None:intergenic 35.0%
CTGTCTGATGAGTTATATCT+TGG - Chr2:84153950-84153969 None:intergenic 35.0%
GAGAAAAAGGAGACAAGAAA+TGG + Chr2:84147528-84147547 MsG0280011449.01.T01:CDS 35.0%
GGTCATTGAATCAAAATCAG+AGG + Chr2:84150866-84150885 MsG0280011449.01.T01:intron 35.0%
GTACTACTAGTAATTTGGAG+TGG - Chr2:84151832-84151851 None:intergenic 35.0%
GTAGTACATTCCAATCATAC+TGG + Chr2:84151736-84151755 MsG0280011449.01.T01:intron 35.0%
GTATTGAGACCATAAACTTG+AGG - Chr2:84151314-84151333 None:intergenic 35.0%
GTTCAAACTATTGTCAATGC+TGG + Chr2:84148740-84148759 MsG0280011449.01.T01:intron 35.0%
GTTGATGTAGAGAATATGCA+AGG + Chr2:84152793-84152812 MsG0280011449.01.T01:CDS 35.0%
TAAAGAACGCATATCAATGC+TGG + Chr2:84148525-84148544 MsG0280011449.01.T01:intron 35.0%
TACAGATTTGAGTAAGCTCA+CGG + Chr2:84149560-84149579 MsG0280011449.01.T01:intron 35.0%
TATAGACATCTCTCTCGATT+GGG + Chr2:84151140-84151159 MsG0280011449.01.T01:intron 35.0%
TATATCGAGCAATCCAAACT+TGG - Chr2:84150244-84150263 None:intergenic 35.0%
TATATTCCATGCTTACCTTG+TGG + Chr2:84150260-84150279 MsG0280011449.01.T01:intron 35.0%
TCAATGCTCAGTATCTATGA+AGG - Chr2:84153868-84153887 None:intergenic 35.0%
TCAGTGTTTGGATCACATTA+TGG + Chr2:84153149-84153168 MsG0280011449.01.T01:CDS 35.0%
TCTATCACATTTGTGTGTCA+TGG + Chr2:84153370-84153389 MsG0280011449.01.T01:intron 35.0%
TCTCATTCAGATAAACCTCT+AGG + Chr2:84151922-84151941 MsG0280011449.01.T01:intron 35.0%
TCTGTCCGTAGTATTCATAA+TGG - Chr2:84151246-84151265 None:intergenic 35.0%
TGACCCCATTATGAATACTA+CGG + Chr2:84151238-84151257 MsG0280011449.01.T01:intron 35.0%
TGAGAGACTAAAAAATGGAG+AGG + Chr2:84151211-84151230 MsG0280011449.01.T01:intron 35.0%
TGTAGGTTATTATTGGAGGA+CGG - Chr2:84150053-84150072 None:intergenic 35.0%
TGTAGTAGTAGCTGGTATTA+TGG - Chr2:84153016-84153035 None:intergenic 35.0%
TGTCCGTAGTATTCATAATG+GGG - Chr2:84151244-84151263 None:intergenic 35.0%
TTAACACAGGTGATTTCACA+TGG + Chr2:84148018-84148037 MsG0280011449.01.T01:intron 35.0%
TTCCTTAATCCGTATGCAAT+TGG - Chr2:84147770-84147789 None:intergenic 35.0%
TTCTACTCTTCTTTCCACTT+TGG - Chr2:84153122-84153141 None:intergenic 35.0%
TTTCACTCTATTACCAGTTC+TGG + Chr2:84151444-84151463 MsG0280011449.01.T01:intron 35.0%
TTTGGAAAGGACATTCAACA+TGG - Chr2:84151494-84151513 None:intergenic 35.0%
! ACTTGTTAGATACACTAGCA+TGG - Chr2:84149022-84149041 None:intergenic 35.0%
! AGCAATGATGGTAATGTTGA+GGG - Chr2:84148820-84148839 None:intergenic 35.0%
! AGTGTTATTACCGAATGAAG+AGG - Chr2:84152612-84152631 None:intergenic 35.0%
! ATATGCGTCCTTTTCTGTTT+AGG + Chr2:84151583-84151602 MsG0280011449.01.T01:intron 35.0%
! ATGATAGTGATAGTGTAGGA+TGG + Chr2:84149475-84149494 MsG0280011449.01.T01:intron 35.0%
! ATGGATTTTATGTGGCAGAT+GGG + Chr2:84148912-84148931 MsG0280011449.01.T01:intron 35.0%
! CGAAGCTTTTCAATTTGGAA+AGG - Chr2:84151507-84151526 None:intergenic 35.0%
! CTTTAAGAGTTGGAGTTGTA+GGG + Chr2:84149049-84149068 MsG0280011449.01.T01:intron 35.0%
! TAGCAATGATGGTAATGTTG+AGG - Chr2:84148821-84148840 None:intergenic 35.0%
! TATGCGTCCTTTTCTGTTTA+GGG + Chr2:84151584-84151603 MsG0280011449.01.T01:intron 35.0%
! TCCAACGTTCAAGTTAATGA+GGG - Chr2:84151950-84151969 None:intergenic 35.0%
! TCTTTAAGAGTTGGAGTTGT+AGG + Chr2:84149048-84149067 MsG0280011449.01.T01:intron 35.0%
! TCTTTAGCTTCACTTAGCTT+AGG + Chr2:84152044-84152063 MsG0280011449.01.T01:intron 35.0%
! TTAACAACGCTTAAAAGCGT+TGG - Chr2:84149906-84149925 None:intergenic 35.0%
!! AAGCGACACTCATTTTGAAA+CGG - Chr2:84147744-84147763 None:intergenic 35.0%
!! CAGAAGCATCCAACAATAAT+AGG + Chr2:84147412-84147431 MsG0280011449.01.T01:CDS 35.0%
!! CTCACTAATTTTAGAAGCCA+AGG - Chr2:84150125-84150144 None:intergenic 35.0%
!! CTTGGCTTCTAAAATTAGTG+AGG + Chr2:84150123-84150142 MsG0280011449.01.T01:intron 35.0%
!! GCTTTTAAGCGTTGTTAAGT+AGG + Chr2:84149908-84149927 MsG0280011449.01.T01:intron 35.0%
!!! TGACAACTTGTTTTTCAAGG+GGG + Chr2:84149941-84149960 MsG0280011449.01.T01:intron 35.0%
!!! TTTTTTCACTACGTATGGCA+TGG - Chr2:84154152-84154171 None:intergenic 35.0%
AACTGCTTCCAGAATGTAAC+AGG - Chr2:84152886-84152905 None:intergenic 40.0%
AAGAAAAACGTGGGAAGGAA+AGG + Chr2:84150528-84150547 MsG0280011449.01.T01:intron 40.0%
AAGTTAATGAGGGTTCCTAG+AGG - Chr2:84151940-84151959 None:intergenic 40.0%
AATGAAGCTAAGGGGGATAA+GGG - Chr2:84152519-84152538 None:intergenic 40.0%
ACAGTGAGAGCAACCATAAT+AGG + Chr2:84150553-84150572 MsG0280011449.01.T01:intron 40.0%
ACAGTTACGAAGATGAAGCA+CGG + Chr2:84153681-84153700 MsG0280011449.01.T01:intron 40.0%
ACTACTTCAAGAACGTGTGA+AGG + Chr2:84154750-84154769 MsG0280011449.01.T01:CDS 40.0%
ACTGGATGAATGAAGCTAAG+GGG - Chr2:84152527-84152546 None:intergenic 40.0%
AGCATTATACAATGTGGGTC+AGG - Chr2:84152290-84152309 None:intergenic 40.0%
AGTCATCGCATCACCTTTAA+GGG - Chr2:84150482-84150501 None:intergenic 40.0%
AGTGGAAAGAAGAGTAGAAG+TGG + Chr2:84153123-84153142 MsG0280011449.01.T01:CDS 40.0%
AGTTATGCGTGTTCTGATGT+TGG - Chr2:84153832-84153851 None:intergenic 40.0%
ATCAACTGCGAGAAACATGA+AGG + Chr2:84148711-84148730 MsG0280011449.01.T01:intron 40.0%
ATCATATCTTACCAGCTCAG+AGG - Chr2:84151565-84151584 None:intergenic 40.0%
ATCCACTGTGAGAAGGAAAA+TGG + Chr2:84154928-84154947 MsG0280011449.01.T01:CDS 40.0%
ATGGACAAGACCTCTATACT+TGG + Chr2:84154706-84154725 MsG0280011449.01.T01:CDS 40.0%
CAATGCTTCATTTCCAGAAC+TGG - Chr2:84151460-84151479 None:intergenic 40.0%
CACTGGATGAATGAAGCTAA+GGG - Chr2:84152528-84152547 None:intergenic 40.0%
CATTGGCATAGAATCAGAGA+AGG + Chr2:84148671-84148690 MsG0280011449.01.T01:intron 40.0%
CCAAAAGAATGCTTTCTAGG+TGG + Chr2:84150191-84150210 MsG0280011449.01.T01:intron 40.0%
CGACCAATTGTTTGGCAATA+CGG + Chr2:84152330-84152349 MsG0280011449.01.T01:intron 40.0%
CGTATTGCCAAACAATTGGT+CGG - Chr2:84152332-84152351 None:intergenic 40.0%
CTAGTGTTGTCTCACCTTAA+AGG + Chr2:84150500-84150519 MsG0280011449.01.T01:intron 40.0%
CTTCTCTGATTCTATGCCAA+TGG - Chr2:84148673-84148692 None:intergenic 40.0%
GAGTTACTCGAATGTAGTGT+AGG - Chr2:84152015-84152034 None:intergenic 40.0%
GATTGCTTCACCAAGTATAG+AGG - Chr2:84154719-84154738 None:intergenic 40.0%
GCAAAAGCTAGTAACCAAAG+TGG + Chr2:84153105-84153124 MsG0280011449.01.T01:CDS 40.0%
GCAATATTGGTCACCCTTAA+AGG + Chr2:84150466-84150485 MsG0280011449.01.T01:intron 40.0%
GCATTCCATTGGATACTTGT+GGG + Chr2:84151781-84151800 MsG0280011449.01.T01:intron 40.0%
GGGTATGAATGTGAACAGAA+AGG + Chr2:84149069-84149088 MsG0280011449.01.T01:intron 40.0%
GGTACTTCTTGTTCTGATTC+TGG - Chr2:84153039-84153058 None:intergenic 40.0%
GTAGGTTATTATTGGAGGAC+GGG - Chr2:84150052-84150071 None:intergenic 40.0%
GTGAAGCTAAAGACAACAGT+TGG - Chr2:84152037-84152056 None:intergenic 40.0%
GTTACTCACATTTACAGAGG+AGG - Chr2:84147978-84147997 None:intergenic 40.0%
TACACACAGAGTTGTTGAGT+TGG + Chr2:84150301-84150320 MsG0280011449.01.T01:intron 40.0%
TAGAAGTGGTTCTCAGTGTT+TGG + Chr2:84153137-84153156 MsG0280011449.01.T01:CDS 40.0%
TAGTCATCGCATCACCTTTA+AGG - Chr2:84150483-84150502 None:intergenic 40.0%
TAGTGTAGGATGGAAATCGA+TGG + Chr2:84149485-84149504 MsG0280011449.01.T01:intron 40.0%
TATTCCATGCTTACCTTGTG+GGG + Chr2:84150262-84150281 MsG0280011449.01.T01:intron 40.0%
TCACTGGATGAATGAAGCTA+AGG - Chr2:84152529-84152548 None:intergenic 40.0%
TCATCTTCTAGTGAGATGGA+CGG + Chr2:84152908-84152927 MsG0280011449.01.T01:intron 40.0%
TCGCTTTAGCCAATTGCATA+CGG + Chr2:84147758-84147777 MsG0280011449.01.T01:intron 40.0%
TCTTCTCATGGAGCAATCAT+GGG + Chr2:84152578-84152597 MsG0280011449.01.T01:intron 40.0%
TGCATTCCATTGGATACTTG+TGG + Chr2:84151780-84151799 MsG0280011449.01.T01:intron 40.0%
TGCTCAGTATCTATGAAGGA+TGG - Chr2:84153864-84153883 None:intergenic 40.0%
TGGAGCAACAATGTTATGAG+AGG + Chr2:84148545-84148564 MsG0280011449.01.T01:intron 40.0%
TGGAGCAATCATGGGAAAAT+TGG + Chr2:84152586-84152605 MsG0280011449.01.T01:intron 40.0%
TGTTGGATGCTTCTGATTGA+AGG - Chr2:84147407-84147426 None:intergenic 40.0%
TTAACATCAGGGAGTGATGA+TGG - Chr2:84154874-84154893 None:intergenic 40.0%
TTCAGCAACCTGTTACATTC+TGG + Chr2:84152875-84152894 MsG0280011449.01.T01:intron 40.0%
TTCTTCTCATGGAGCAATCA+TGG + Chr2:84152577-84152596 MsG0280011449.01.T01:intron 40.0%
TTGAATGTATTACCCCCACA+AGG - Chr2:84150278-84150297 None:intergenic 40.0%
TTTCCATGTGTAGCAGCATT+AGG - Chr2:84147457-84147476 None:intergenic 40.0%
! ACCCTCATTAACTTGAACGT+TGG + Chr2:84151946-84151965 MsG0280011449.01.T01:intron 40.0%
! AGCCAATTGCATACGGATTA+AGG + Chr2:84147765-84147784 MsG0280011449.01.T01:intron 40.0%
! ATGTATGTCATCCCCTTTTG+TGG + Chr2:84151978-84151997 MsG0280011449.01.T01:intron 40.0%
! ATTTCTTGTGGTGCCAAGTT+TGG + Chr2:84150228-84150247 MsG0280011449.01.T01:intron 40.0%
! ATTTGAAGCACTCGTGCATT+TGG + Chr2:84150835-84150854 MsG0280011449.01.T01:intron 40.0%
! CATGGATTTTATGTGGCAGA+TGG + Chr2:84148911-84148930 MsG0280011449.01.T01:intron 40.0%
! CTCCAACGTTCAAGTTAATG+AGG - Chr2:84151951-84151970 None:intergenic 40.0%
! GGAAAATTGGCCTCTTCATT+CGG + Chr2:84152599-84152618 MsG0280011449.01.T01:intron 40.0%
! TACTATTCCTGGCTTGAAGA+AGG + Chr2:84153224-84153243 MsG0280011449.01.T01:CDS 40.0%
! TCCTTTGGGAATTCAACTCT+TGG + Chr2:84155017-84155036 MsG0280011449.01.T01:CDS 40.0%
! TCGTTTCACATGTTTTGCTC+AGG + Chr2:84151524-84151543 MsG0280011449.01.T01:CDS 40.0%
!! AGATGAGACATGGTATTGGT+AGG - Chr2:84152249-84152268 None:intergenic 40.0%
!!! CCACCTAGAAAGCATTCTTT+TGG - Chr2:84150194-84150213 None:intergenic 40.0%
!!! TGCTTATATTTTGGGACGGA+GGG + Chr2:84149202-84149221 MsG0280011449.01.T01:intron 40.0%
!!! TTGCTTATATTTTGGGACGG+AGG + Chr2:84149201-84149220 MsG0280011449.01.T01:intron 40.0%
AGAACGTGTGAAGGAGTTAG+AGG + Chr2:84154759-84154778 MsG0280011449.01.T01:CDS 45.0%
AGAAGCTCATGGGAGATACA+AGG + Chr2:84147490-84147509 MsG0280011449.01.T01:CDS 45.0%
AGTCACGCATAACTGATGAG+TGG + Chr2:84150330-84150349 MsG0280011449.01.T01:intron 45.0%
AGTTAGAGGAACGGAACAAG+AGG + Chr2:84154773-84154792 MsG0280011449.01.T01:CDS 45.0%
ATAAGAGGGTGAGAAGCTCA+TGG + Chr2:84147479-84147498 MsG0280011449.01.T01:CDS 45.0%
ATGAATGTCCTTGGAGTGGA+CGG - Chr2:84152974-84152993 None:intergenic 45.0%
ATGCTATACGGGCCACATAT+TGG + Chr2:84152305-84152324 MsG0280011449.01.T01:intron 45.0%
ATGTCAAGATCCCGTGTCAT+TGG - Chr2:84153925-84153944 None:intergenic 45.0%
ATTCCATGCTTACCTTGTGG+GGG + Chr2:84150263-84150282 MsG0280011449.01.T01:intron 45.0%
CATTGAGATCCACTGTGAGA+AGG + Chr2:84154921-84154940 MsG0280011449.01.T01:CDS 45.0%
CTATTGTTGCTCAGGTACGT+AGG + Chr2:84155045-84155064 MsG0280011449.01.T01:CDS 45.0%
CTCGTGCATTTGGTACATTC+AGG + Chr2:84150845-84150864 MsG0280011449.01.T01:intron 45.0%
CTGGATGAATGAAGCTAAGG+GGG - Chr2:84152526-84152545 None:intergenic 45.0%
GAATGAAGCTAAGGGGGATA+AGG - Chr2:84152520-84152539 None:intergenic 45.0%
GACCTACCTGTATTCAGAGA+CGG + Chr2:84150747-84150766 MsG0280011449.01.T01:intron 45.0%
GAGAATGAATGTCCTTGGAG+TGG - Chr2:84152978-84152997 None:intergenic 45.0%
GAGTTCTTATGCTTGGAGCT+TGG - Chr2:84147908-84147927 None:intergenic 45.0%
GATGTGTGTGCCATCTATGA+TGG + Chr2:84153398-84153417 MsG0280011449.01.T01:intron 45.0%
GATTCTGGTGTAGTAGTAGC+TGG - Chr2:84153024-84153043 None:intergenic 45.0%
GCACTTTCAGCTACTATTCC+TGG + Chr2:84153213-84153232 MsG0280011449.01.T01:CDS 45.0%
GCCAAGAGTTGAATTCCCAA+AGG - Chr2:84155021-84155040 None:intergenic 45.0%
GCCAGCAGTGTATTTCCTTT+GGG + Chr2:84155003-84155022 MsG0280011449.01.T01:CDS 45.0%
GCTTTCACACTTTCCCTCTT+TGG + Chr2:84151634-84151653 MsG0280011449.01.T01:intron 45.0%
GGACCGTATTGCCAAACAAT+TGG - Chr2:84152336-84152355 None:intergenic 45.0%
GGTTCGATTGAGATGAGACA+TGG - Chr2:84152259-84152278 None:intergenic 45.0%
GTACACCCACAAGTATCCAA+TGG - Chr2:84151789-84151808 None:intergenic 45.0%
GTCTCTGAATACAGGTAGGT+CGG - Chr2:84150748-84150767 None:intergenic 45.0%
GTGTGAAGGAGTTAGAGGAA+CGG + Chr2:84154764-84154783 MsG0280011449.01.T01:CDS 45.0%
TAAGAGGGTGAGAAGCTCAT+GGG + Chr2:84147480-84147499 MsG0280011449.01.T01:CDS 45.0%
TACTCGAATGTAGTGTAGGC+TGG - Chr2:84152011-84152030 None:intergenic 45.0%
TATTGGGCCGACCAATTGTT+TGG + Chr2:84152322-84152341 MsG0280011449.01.T01:intron 45.0%
TCCCAAAGGAAATACACTGC+TGG - Chr2:84155007-84155026 None:intergenic 45.0%
TGCCAGCAGTGTATTTCCTT+TGG + Chr2:84155002-84155021 MsG0280011449.01.T01:CDS 45.0%
TGCTATACGGGCCACATATT+GGG + Chr2:84152306-84152325 MsG0280011449.01.T01:intron 45.0%
TGGCTTCACTATTGTTGCTC+AGG + Chr2:84155037-84155056 MsG0280011449.01.T01:CDS 45.0%
TTCACTACGTATGGCATGGA+TGG - Chr2:84154148-84154167 None:intergenic 45.0%
TTCTTATGCTTGGAGCTTGG+TGG - Chr2:84147905-84147924 None:intergenic 45.0%
! ACTATGTGTTGGTCTCGTGT+CGG + Chr2:84153787-84153806 MsG0280011449.01.T01:intron 45.0%
! ATGTCATCCCCTTTTGTGGA+GGG + Chr2:84151982-84152001 MsG0280011449.01.T01:intron 45.0%
! TATGATACCCGGCTTGAAGA+AGG + Chr2:84147576-84147595 MsG0280011449.01.T01:CDS 45.0%
! TATGTCATCCCCTTTTGTGG+AGG + Chr2:84151981-84152000 MsG0280011449.01.T01:intron 45.0%
! TTTTATGTGGCAGATGGGTG+AGG + Chr2:84148917-84148936 MsG0280011449.01.T01:intron 45.0%
!!! TGCCATTTTCCTTCTCACAG+TGG - Chr2:84154933-84154952 None:intergenic 45.0%
!! ATTTATTATACATTAAAAAA+GGG - Chr2:84154215-84154234 None:intergenic 5.0%
!! TATTTATTATACATTAAAAA+AGG - Chr2:84154216-84154235 None:intergenic 5.0%
!!! ATATATTAGTATTTTTTTTT+TGG - Chr2:84151123-84151142 None:intergenic 5.0%
!!! ATTATAATAACTTTTTATAA+TGG + Chr2:84147692-84147711 MsG0280011449.01.T01:intron 5.0%
!!! TATATTAGTATTTTTTTTTT+GGG - Chr2:84151122-84151141 None:intergenic 5.0%
AATGTGGGTCAGGTGACTTG+AGG - Chr2:84152280-84152299 None:intergenic 50.0%
ACCAGCAGTGTGCTTCCATT+TGG + Chr2:84148786-84148805 MsG0280011449.01.T01:intron 50.0%
ATGAAGCACGGATACAGGCA+CGG + Chr2:84153693-84153712 MsG0280011449.01.T01:intron 50.0%
CAATTGGTCGGCCCAATATG+TGG - Chr2:84152320-84152339 None:intergenic 50.0%
CACTGCTGGTGGAAACATAG+AGG - Chr2:84148776-84148795 None:intergenic 50.0%
CGAAGATGAAGCACGGATAC+AGG + Chr2:84153688-84153707 MsG0280011449.01.T01:intron 50.0%
CTCCGTCTCTGAATACAGGT+AGG - Chr2:84150752-84150771 None:intergenic 50.0%
GAACTGACCTTCTTCAAGCC+GGG - Chr2:84147586-84147605 None:intergenic 50.0%
GCACTTTCGGCTATGATACC+CGG + Chr2:84147565-84147584 MsG0280011449.01.T01:CDS 50.0%
GGAACTGACCTTCTTCAAGC+CGG - Chr2:84147587-84147606 None:intergenic 50.0%
GTGCCTAATGCTGCTACACA+TGG + Chr2:84147451-84147470 MsG0280011449.01.T01:CDS 50.0%
TGCTCAGGAGACTTTACTCG+TGG + Chr2:84151539-84151558 MsG0280011449.01.T01:CDS 50.0%
TTACCCCCACAAGGTAAGCA+TGG - Chr2:84150269-84150288 None:intergenic 50.0%
TTCAAGGGGGCAGTCATTAC+TGG + Chr2:84149954-84149973 MsG0280011449.01.T01:intron 50.0%
! AAATGGAAGCACACTGCTGG+TGG - Chr2:84148787-84148806 None:intergenic 50.0%
! TCCAAATGGAAGCACACTGC+TGG - Chr2:84148790-84148809 None:intergenic 50.0%
! TTCAGGGAGGAGCACATGAT+TGG - Chr2:84148643-84148662 None:intergenic 50.0%
!! CTGTGATGTGTCGACTTCAC+TGG - Chr2:84152545-84152564 None:intergenic 50.0%
AAGGGGGCAGTCATTACTGG+TGG + Chr2:84149957-84149976 MsG0280011449.01.T01:intron 55.0%
ATGCCAATGGCCTCCACTTC+AGG - Chr2:84148660-84148679 None:intergenic 55.0%
ATGGACGGCTCAGATAGCTC+AGG + Chr2:84152923-84152942 MsG0280011449.01.T01:intron 55.0%
CACTTGTGATGAGCAGCGAG+CGG + Chr2:84153894-84153913 MsG0280011449.01.T01:intron 55.0%
CATCAACACCGTCCACTCCA+AGG + Chr2:84152963-84152982 MsG0280011449.01.T01:CDS 55.0%
CTGGCTCCGTCTCTGAATAC+AGG - Chr2:84150756-84150775 None:intergenic 55.0%
CTGTATTCAGAGACGGAGCC+AGG + Chr2:84150754-84150773 MsG0280011449.01.T01:intron 55.0%
GGCAGATGGGTGAGGAATAC+AGG + Chr2:84148925-84148944 MsG0280011449.01.T01:intron 55.0%
GGTCTTGGGCGTGTAATTCC+TGG - Chr2:84150775-84150794 None:intergenic 55.0%
TCATGTGCTCCTCCCTGAAG+TGG + Chr2:84148644-84148663 MsG0280011449.01.T01:intron 55.0%
TGCCAATGGCCTCCACTTCA+GGG - Chr2:84148659-84148678 None:intergenic 55.0%
TGGACGGCTCAGATAGCTCA+GGG + Chr2:84152924-84152943 MsG0280011449.01.T01:intron 55.0%
TTTACTCGTGGCCTCTGAGC+TGG + Chr2:84151551-84151570 MsG0280011449.01.T01:CDS 55.0%
! GGCAGTCATTACTGGTGGAC+TGG + Chr2:84149962-84149981 MsG0280011449.01.T01:intron 55.0%
! TGTTGGTCTCGTGTCGGTGT+CGG + Chr2:84153793-84153812 MsG0280011449.01.T01:intron 55.0%
!! GGAGTGGACGGTGTTGATGA+AGG - Chr2:84152962-84152981 None:intergenic 55.0%
CAATGGCCTCCACTTCAGGG+AGG - Chr2:84148656-84148675 None:intergenic 60.0%
CTCCCTGAAGTGGAGGCCAT+TGG + Chr2:84148654-84148673 MsG0280011449.01.T01:intron 60.0%
CTGGCGACCCTCCACAAAAG+GGG - Chr2:84151992-84152011 None:intergenic 60.0%
GCTGGCGACCCTCCACAAAA+GGG - Chr2:84151993-84152012 None:intergenic 60.0%
TGTGCTCCTCCCTGAAGTGG+AGG + Chr2:84148647-84148666 MsG0280011449.01.T01:intron 60.0%
!! AGCGGTGCTGCCAATGACAC+GGG + Chr2:84153912-84153931 MsG0280011449.01.T01:intron 60.0%
!! GAGCGGTGCTGCCAATGACA+CGG + Chr2:84153911-84153930 MsG0280011449.01.T01:intron 60.0%
GGCTGGCGACCCTCCACAAA+AGG - Chr2:84151994-84152013 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr2 gene 84147385 84155122 84147385 ID=MsG0280011449.01;Name=MsG0280011449.01
Chr2 mRNA 84147385 84155122 84147385 ID=MsG0280011449.01.T01;Parent=MsG0280011449.01;Name=MsG0280011449.01.T01;_AED=0.50;_eAED=0.50;_QI=0|0.2|0|0.83|1|1|6|0|395
Chr2 exon 84147385 84147597 84147385 ID=MsG0280011449.01.T01:exon:12596;Parent=MsG0280011449.01.T01
Chr2 exon 84148930 84149006 84148930 ID=MsG0280011449.01.T01:exon:12597;Parent=MsG0280011449.01.T01
Chr2 exon 84151461 84151572 84151461 ID=MsG0280011449.01.T01:exon:12598;Parent=MsG0280011449.01.T01
Chr2 exon 84152787 84152854 84152787 ID=MsG0280011449.01.T01:exon:12599;Parent=MsG0280011449.01.T01
Chr2 exon 84152945 84153245 84152945 ID=MsG0280011449.01.T01:exon:12600;Parent=MsG0280011449.01.T01
Chr2 exon 84154706 84155122 84154706 ID=MsG0280011449.01.T01:exon:12601;Parent=MsG0280011449.01.T01
Chr2 CDS 84147385 84147597 84147385 ID=MsG0280011449.01.T01:cds;Parent=MsG0280011449.01.T01
Chr2 CDS 84148930 84149006 84148930 ID=MsG0280011449.01.T01:cds;Parent=MsG0280011449.01.T01
Chr2 CDS 84151461 84151572 84151461 ID=MsG0280011449.01.T01:cds;Parent=MsG0280011449.01.T01
Chr2 CDS 84152787 84152854 84152787 ID=MsG0280011449.01.T01:cds;Parent=MsG0280011449.01.T01
Chr2 CDS 84152945 84153245 84152945 ID=MsG0280011449.01.T01:cds;Parent=MsG0280011449.01.T01
Chr2 CDS 84154706 84155122 84154706 ID=MsG0280011449.01.T01:cds;Parent=MsG0280011449.01.T01
Gene Sequence

>MsG0280011449.01.T01

ATGAAGGGTAGTGATAACTCCTTCAATCAGAAGCATCCAACAATAATAGGACATTGTTCTAATTCAGTGCCTAATGCTGCTACACATGGAAAGAATAAGAGGGTGAGAAGCTCATGGGAGATACAAGGTCACATAATGTCAGAGAGAAAAAGGAGACAAGAAATGGCAGAGAGATTCATAGCACTTTCGGCTATGATACCCGGCTTGAAGAAGATGGGTGAGGAATACAGGATAACAATAGAAGAATTGATGACAAAGTTGAAACAGGATGTTTTGAAGTTATATGACATTTCTGGAAATGAAGCATTGTGTAAACGTGACCATGTTGAATGTCCTTTCCAAATTGAAAAGCTTCGTTTCACATGTTTTGCTCAGGAGACTTTACTCGTGGCCTCTGAGCTGGAAGTGGTTGATGTAGAGAATATGCAAGGGCAATATTGTCATCAAACAAGTATTGATGATGAAGAAGAGGAAAAAGCTTCATCCTTCATCAACACCGTCCACTCCAAGGACATTCATTCTCTCTTTGATAAATCTACCATAATACCAGCTACTACTACACCAGAATCAGAACAAGAAGTACCAAGAACAAAGAGTAGAAGTAGTAATAAGAGGAGTTTGGAAACAAAAGCAAAAGCTAGTAACCAAAGTGGAAAGAAGAGTAGAAGTGGTTCTCAGTGTTTGGATCACATTATGGCTGAGAGAAAAAGAAGACTAGAACTATCACAGAAGTTCATTGCACTTTCAGCTACTATTCCTGGCTTGAAGAAGATGGACAAGACCTCTATACTTGGTGAAGCAATCAATTATGTGAAACTACTTCAAGAACGTGTGAAGGAGTTAGAGGAACGGAACAAGAGGAACATAGAATCAACAATAATCCACAAAAGTGATTTGTGTACAAATGACACAAATTCTGATCAGGATTGTTGTAAACCATCATCACTCCCTGATGTTAAAGCAAGAGTATTGGAAAATGAAGTACTCATTGAGATCCACTGTGAGAAGGAAAATGGCATTGAGATCAAAATATTGAACTTGCTTGAAAATGTTCATCTTATTGTCACTGCCAGCAGTGTATTTCCTTTGGGAATTCAACTCTTGGCTTCACTATTGTTGCTCAGGTACGTAGGCATTGCATTTTGCAAGACTTTCATGAGACAAGTTTATGATTCTATAAGCTTTTAA

Protein sequence

>MsG0280011449.01.T01

MKGSDNSFNQKHPTIIGHCSNSVPNAATHGKNKRVRSSWEIQGHIMSERKRRQEMAERFIALSAMIPGLKKMGEEYRITIEELMTKLKQDVLKLYDISGNEALCKRDHVECPFQIEKLRFTCFAQETLLVASELEVVDVENMQGQYCHQTSIDDEEEEKASSFINTVHSKDIHSLFDKSTIIPATTTPESEQEVPRTKSRSSNKRSLETKAKASNQSGKKSRSGSQCLDHIMAERKRRLELSQKFIALSATIPGLKKMDKTSILGEAINYVKLLQERVKELEERNKRNIESTIIHKSDLCTNDTNSDQDCCKPSSLPDVKARVLENEVLIEIHCEKENGIEIKILNLLENVHLIVTASSVFPLGIQLLASLLLLRYVGIAFCKTFMRQVYDSISF*