AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180004747.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180004747.01.T01 MTR_1g085730 94.011 551 22 2 1 540 1 551 0.0 1014
MsG0180004747.01.T01 MTR_1g085730 90.934 364 22 2 1 353 1 364 0.0 636
MsG0180004747.01.T01 MTR_7g031310 27.475 495 311 15 73 536 16 493 7.62e-41 154
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180004747.01.T01 AT4G01690 74.815 540 119 5 12 540 4 537 0.0 796
MsG0180004747.01.T01 AT4G01690 70.185 540 113 6 12 540 4 506 0.0 726
MsG0180004747.01.T01 AT5G14220 25.714 490 319 12 75 534 21 495 1.89e-37 145
MsG0180004747.01.T01 AT5G14220 25.714 490 319 12 75 534 69 543 2.79e-37 145
MsG0180004747.01.T01 AT5G14220 25.527 474 310 13 75 534 21 465 1.64e-35 139
MsG0180004747.01.T01 AT5G14220 24.161 447 298 11 118 534 2 437 1.96e-29 121
MsG0180004747.01.T01 AT5G14220 24.161 447 298 11 118 534 2 437 1.96e-29 121

Find 173 sgRNAs with CRISPR-Local

Find 441 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCTCAGGATCCAATTGTTT+TGG 0.225364 1:+82083464 MsG0180004747.01.T01:CDS
CAAAATGGTGGTAGCATTAT+TGG 0.232913 1:+82081009 MsG0180004747.01.T01:CDS
CCTGAGCATTTGGATTTATA+AGG 0.239671 1:-82083449 None:intergenic
ATTGGAGGGGCTACCAATTC+TGG 0.258952 1:+82082880 MsG0180004747.01.T01:CDS
GATTTGAGGGGCTGTTCCTT+GGG 0.259606 1:+82083577 MsG0180004747.01.T01:CDS
CGGAGAAGGGTTTGAGAGGG+TGG 0.262547 1:-82078149 None:intergenic
TGGAGAGAGATGGGTTTCTT+TGG 0.265858 1:+82078474 MsG0180004747.01.T01:CDS
TGCAAAGAAACAACTCCTTC+TGG 0.269612 1:-82081432 None:intergenic
GGCAAGATCAGGGCTGGCTT+TGG 0.280653 1:+82079506 MsG0180004747.01.T01:CDS
GGCAAATCAGTTGGCTTTCC+CGG 0.284184 1:-82079458 None:intergenic
GAGTTCGTGCGTCGAATCTT+GGG 0.291432 1:+82079716 MsG0180004747.01.T01:CDS
TCTGATCTAATGGCTTCTTT+TGG 0.297997 1:-82082558 None:intergenic
ACAATTGGATCCTGAGCATT+TGG 0.304286 1:-82083459 None:intergenic
GATGGTGAGTTGAAGGGATT+TGG 0.305933 1:+82082591 MsG0180004747.01.T01:CDS
TTAAGTATGAAAGCAGCTTT+TGG 0.310156 1:+82080967 MsG0180004747.01.T01:CDS
TCTCTCTTGTATTGCTTTGA+AGG 0.316808 1:-82081037 None:intergenic
TTTGAAGGACGATCTTGTTT+TGG 0.318825 1:+82079382 MsG0180004747.01.T01:CDS
TCAGAAGGTTGAAAACTATT+AGG 0.342704 1:-82078506 None:intergenic
CTTCCAGGTGGTGCTCGGTT+AGG 0.346004 1:-82082838 None:intergenic
CCATTCCACAACACAAATCT+AGG 0.348854 1:-82079419 None:intergenic
GGATTTGAGGGGCTGTTCCT+TGG 0.351474 1:+82083576 MsG0180004747.01.T01:CDS
ACAGTTTGACCCTTTGGCTT+TGG 0.353786 1:-82081176 None:intergenic
TACCTAATGTTTGCACTCCT+TGG 0.364807 1:-82082632 None:intergenic
TGAGTATTGGTGGCAAGATC+AGG 0.365761 1:+82079495 MsG0180004747.01.T01:CDS
TTCTTTGACTTAATGAGTAT+TGG 0.369041 1:+82079482 MsG0180004747.01.T01:CDS
AGAGTTCGTGCGTCGAATCT+TGG 0.369517 1:+82079715 MsG0180004747.01.T01:CDS
TTGAATTGGAGGAGGGGAAA+GGG 0.374371 1:-82078187 None:intergenic
GTAACAAGGTGAAGTTATCT+TGG 0.380123 1:+82081352 MsG0180004747.01.T01:CDS
GCTATTCCACAGTTCTTAGT+TGG 0.382466 1:+82083507 MsG0180004747.01.T01:CDS
GAAATGGAAACTGCCGCAAC+TGG 0.385344 1:-82082531 None:intergenic
GCAAAGAAACAACTCCTTCT+GGG 0.387031 1:-82081431 None:intergenic
TATCAAGCATTCTGATCTAA+TGG 0.392972 1:-82082568 None:intergenic
CTTTGATAAAATCCCAGAAT+TGG 0.395418 1:-82082893 None:intergenic
CTATGTGTCTGGTGTTGCCT+TGG 0.396049 1:+82083605 MsG0180004747.01.T01:CDS
TTCAAGAGTAGAACCCTTCC+AGG 0.398239 1:-82082853 None:intergenic
TTCCAGGTGGTGCTCGGTTA+GGG 0.398524 1:-82082837 None:intergenic
GATCCAACAGTTTGACCCTT+TGG 0.399991 1:-82081182 None:intergenic
GGAGAGAGATGGGTTTCTTT+GGG 0.402634 1:+82078475 MsG0180004747.01.T01:CDS
GATGGGTTTCTTTGGGAAGA+AGG 0.407260 1:+82078482 MsG0180004747.01.T01:CDS
GGTTTGAGAGGGTGGGAAGA+AGG 0.407669 1:-82078141 None:intergenic
GGGAAAGGGGAATGGAGATG+AGG 0.409681 1:-82078173 None:intergenic
TTGGAGGGGCTACCAATTCT+GGG 0.425638 1:+82082881 MsG0180004747.01.T01:CDS
TGGGAAATTGAGGCCGGTGC+CGG 0.426371 1:+82079439 MsG0180004747.01.T01:CDS
GTGGTGCTCGGTTAGGGAAA+AGG 0.428455 1:-82082831 None:intergenic
GTCAAACTGTTGGATCATTC+CGG 0.429218 1:+82081189 MsG0180004747.01.T01:CDS
GCAACATGGTAAGTCCCTTC+CGG 0.429534 1:-82081208 None:intergenic
AATGGAGATGAGGGCGGAGA+AGG 0.430870 1:-82078163 None:intergenic
CTCTCCGGAATTTGACTTTG+AGG 0.439377 1:-82078306 None:intergenic
AGTATTAGTAAACTGGATAG+TGG 0.439960 1:+82081384 MsG0180004747.01.T01:CDS
CTAGATTTGTGTTGTGGAAT+GGG 0.440359 1:+82079420 MsG0180004747.01.T01:CDS
AGGGCTGGCTTTGGAGCACT+TGG 0.442410 1:+82079515 MsG0180004747.01.T01:CDS
TACCTAGCAGAAATTGCGTT+TGG 0.443372 1:-82081230 None:intergenic
TCCGTTGATTGTGTAGTTGT+TGG 0.448125 1:+82078335 MsG0180004747.01.T01:CDS
TGGAGGAGGGGAAAGGGGAA+TGG 0.448268 1:-82078181 None:intergenic
ATGGAGATGAGGGCGGAGAA+GGG 0.448458 1:-82078162 None:intergenic
ACCACCTCAAAGTCAAATTC+CGG 0.452403 1:+82078302 MsG0180004747.01.T01:CDS
GGAAAGGGGAATGGAGATGA+GGG 0.452855 1:-82078172 None:intergenic
TTTGAATTGGAGGAGGGGAA+AGG 0.454290 1:-82078188 None:intergenic
TGAATTGGAGGAGGGGAAAG+GGG 0.455157 1:-82078186 None:intergenic
AGCAACGGAGACGGAGAATA+GGG 0.457149 1:-82078244 None:intergenic
AAGGGGAATGGAGATGAGGG+CGG 0.459680 1:-82078169 None:intergenic
TCAGTTGGCTTTCCCGGCAC+CGG 0.460917 1:-82079452 None:intergenic
TACTCTTGAATTACATTGGA+GGG 0.461041 1:+82082866 MsG0180004747.01.T01:CDS
TATGTGTCTGGTGTTGCCTT+GGG 0.462152 1:+82083606 MsG0180004747.01.T01:CDS
GTGTGGAGGCTCGAACAAAA+TGG 0.463440 1:+82080994 MsG0180004747.01.T01:CDS
GAGCAACGGAGACGGAGAAT+AGG 0.465383 1:-82078245 None:intergenic
AAGGAACAGCCCCTCAAATC+CGG 0.472268 1:-82083574 None:intergenic
GTTCTACTCTTGAATTACAT+TGG 0.473931 1:+82082862 MsG0180004747.01.T01:CDS
AGAAAACACACTGGAGGAGG+AGG 0.474459 1:-82079545 None:intergenic
AACACAAATCTAGGTGCATC+AGG 0.475052 1:-82079410 None:intergenic
TTATTACTGTGGAGAGAGAT+GGG 0.476397 1:+82078465 MsG0180004747.01.T01:CDS
TGGTGCTCGGTTAGGGAAAA+GGG 0.478452 1:-82082830 None:intergenic
ATTATTACTGTGGAGAGAGA+TGG 0.478908 1:+82078464 MsG0180004747.01.T01:CDS
TTTGACTTAATGAGTATTGG+TGG 0.479201 1:+82079485 MsG0180004747.01.T01:CDS
GAAAGTGCATCTGCAGCAGC+AGG 0.479760 1:-82082492 None:intergenic
GGGAAATTGAGGCCGGTGCC+GGG 0.482439 1:+82079440 MsG0180004747.01.T01:CDS
AGATCAGAATGCTTGATAGA+TGG 0.483446 1:+82082573 MsG0180004747.01.T01:CDS
GCCTTGGGAAGGTGTGTTGA+GGG 0.489434 1:+82083621 MsG0180004747.01.T01:CDS
CCTTATAAATCCAAATGCTC+AGG 0.489745 1:+82083449 MsG0180004747.01.T01:CDS
AGCCAAGGAGTGCAAACATT+AGG 0.492529 1:+82082630 MsG0180004747.01.T01:CDS
TGCGTCGAATCTTGGGGCCG+AGG 0.495776 1:+82079723 MsG0180004747.01.T01:CDS
TTCCCTAACCGAGCACCACC+TGG 0.500403 1:+82082835 MsG0180004747.01.T01:CDS
TGTCCCCAGTGTTGTTGTTA+CGG 0.500765 1:+82078415 MsG0180004747.01.T01:CDS
CTTGATAGATGGTGAGTTGA+AGG 0.501381 1:+82082584 MsG0180004747.01.T01:CDS
GGAGACGGAGAATAGGGTTA+TGG 0.502450 1:-82078238 None:intergenic
ATTTGAGGGGCTGTTCCTTG+GGG 0.502668 1:+82083578 MsG0180004747.01.T01:CDS
GCCTCCGTAACAACAACACT+GGG 0.506300 1:-82078419 None:intergenic
AAGCCAAAGGGTCAAACTGT+TGG 0.506404 1:+82081179 MsG0180004747.01.T01:CDS
GTGACAGGGTCATGAGGAAT+CGG 0.511762 1:+82079688 MsG0180004747.01.T01:intron
TGCCTTGGGAAGGTGTGTTG+AGG 0.513044 1:+82083620 MsG0180004747.01.T01:CDS
CCTAGATTTGTGTTGTGGAA+TGG 0.519996 1:+82079419 MsG0180004747.01.T01:CDS
AGGGCGGAGAAGGGTTTGAG+AGG 0.522166 1:-82078153 None:intergenic
CAGTGGCCTTTGCATCGCTC+AGG 0.523869 1:+82078367 MsG0180004747.01.T01:CDS
ATACTCATTAAGTCAAAGAA+AGG 0.523934 1:-82079479 None:intergenic
ACAGACAGTGGTTGCAGCAA+TGG 0.525178 1:-82081498 None:intergenic
GTTGATTGTGTAGTTGTTGG+TGG 0.530881 1:+82078338 MsG0180004747.01.T01:CDS
CTACTCTTGAATTACATTGG+AGG 0.531064 1:+82082865 MsG0180004747.01.T01:CDS
CCGCAATGGAGCAACGGAGA+CGG 0.540345 1:-82078253 None:intergenic
CAAAGAAACAACTCCTTCTG+GGG 0.540704 1:-82081430 None:intergenic
GCAGGTGGACAGTGGTTTGA+AGG 0.542677 1:+82079367 MsG0180004747.01.T01:intron
AGAAATTGCGTTTGGCAACA+TGG 0.544410 1:-82081222 None:intergenic
TGTTGTGGAATGGGAAATTG+AGG 0.544788 1:+82079429 MsG0180004747.01.T01:CDS
TCATATACAGGTGTCTATGC+CGG 0.548115 1:+82080931 MsG0180004747.01.T01:intron
ATTGGTGGCAAGATCAGGGC+TGG 0.549710 1:+82079500 MsG0180004747.01.T01:CDS
ACTCTTGAATTACATTGGAG+GGG 0.550694 1:+82082867 MsG0180004747.01.T01:CDS
AAAAGAAAACACACTGGAGG+AGG 0.550713 1:-82079548 None:intergenic
TCCGGAATTTGACTTTGAGG+TGG 0.550887 1:-82078303 None:intergenic
GAACCCTTCCAGGTGGTGCT+CGG 0.551325 1:-82082843 None:intergenic
TCAAAGAAAGGCAAATCAGT+TGG 0.554397 1:-82079467 None:intergenic
CGCCTCCGTAACAACAACAC+TGG 0.557070 1:-82078420 None:intergenic
GATTTGGTCAATTGCATCCA+CGG 0.558189 1:+82082607 MsG0180004747.01.T01:CDS
GGAGAAGGGTTTGAGAGGGT+GGG 0.559498 1:-82078148 None:intergenic
TGTCTGGTGTTGCCTTGGGA+AGG 0.559605 1:+82083610 MsG0180004747.01.T01:CDS
GAGTATTGGTGGCAAGATCA+GGG 0.567150 1:+82079496 MsG0180004747.01.T01:CDS
TTTGAGGGGCTGTTCCTTGG+GGG 0.567319 1:+82083579 MsG0180004747.01.T01:CDS
TGCGGTGGATTCCTCCGCAA+TGG 0.568908 1:-82078267 None:intergenic
ACCAACAACTACACAATCAA+CGG 0.569014 1:-82078336 None:intergenic
TAGGCGTCTGCCAAAGCCAA+AGG 0.571021 1:+82081166 MsG0180004747.01.T01:intron
GAGGCGAAAGACCGAGTTGG+TGG 0.572089 1:+82078437 MsG0180004747.01.T01:CDS
GATTGTGTAGTTGTTGGTGG+TGG 0.572993 1:+82078341 MsG0180004747.01.T01:CDS
ATCAACGGATGAGGACTCTC+CGG 0.574458 1:-82078321 None:intergenic
ATGCACCTAGATTTGTGTTG+TGG 0.582787 1:+82079414 MsG0180004747.01.T01:CDS
TAACCGAGCACCACCTGGAA+GGG 0.584581 1:+82082840 MsG0180004747.01.T01:CDS
CAATTGCATCCACGGAGCCA+AGG 0.584598 1:+82082615 MsG0180004747.01.T01:CDS
TGGTGGGAATATTATTACTG+TGG 0.587037 1:+82078454 MsG0180004747.01.T01:CDS
AGGCGTCTGCCAAAGCCAAA+GGG 0.588421 1:+82081167 MsG0180004747.01.T01:intron
CTAACCGAGCACCACCTGGA+AGG 0.589476 1:+82082839 MsG0180004747.01.T01:CDS
AACTGTTGGATCATTCCGGA+AGG 0.589794 1:+82081193 MsG0180004747.01.T01:CDS
TGTTGGCAGGTTAGGTAACA+AGG 0.592433 1:+82081338 MsG0180004747.01.T01:intron
GCAGCAATGGACTAGCAACA+TGG 0.594611 1:-82081485 None:intergenic
ACTAGCAACATGGGAAGGAA+TGG 0.596346 1:-82081475 None:intergenic
GTTGTTGGTGGTGGTATCAG+TGG 0.596941 1:+82078350 MsG0180004747.01.T01:CDS
CCGTCTCCGTTGCTCCATTG+CGG 0.597409 1:+82078253 MsG0180004747.01.T01:CDS
CGCAGAGAGTGTACAAGTAG+CGG 0.598522 1:+82083682 MsG0180004747.01.T01:CDS
TCCCTCAACACACCTTCCCA+AGG 0.601614 1:-82083622 None:intergenic
AGTTCGTGCGTCGAATCTTG+GGG 0.604055 1:+82079717 MsG0180004747.01.T01:CDS
CTTTCTACAAAGCATGCTGA+TGG 0.605299 1:+82078392 MsG0180004747.01.T01:CDS
AATGGTGGTAGCATTATTGG+TGG 0.605595 1:+82081012 MsG0180004747.01.T01:CDS
TTTGTTTAATTGCAGACGGA+GGG 0.606182 1:+82083387 MsG0180004747.01.T01:intron
GGGCGGAGAAGGGTTTGAGA+GGG 0.606191 1:-82078152 None:intergenic
AACTACACAATCAACGGATG+AGG 0.607076 1:-82078330 None:intergenic
GTTTGCACTCCTTGGCTCCG+TGG 0.607612 1:-82082624 None:intergenic
AAAGAGCCTGAGCGATGCAA+AGG 0.607996 1:-82078373 None:intergenic
TACTTCAGCTGCTATCTCGT+AGG 0.608699 1:-82083646 None:intergenic
GAAAACACACTGGAGGAGGA+GGG 0.609629 1:-82079544 None:intergenic
CCCCAGTGTTGTTGTTACGG+AGG 0.614220 1:+82078418 MsG0180004747.01.T01:CDS
ATGGTGAGCATAGGATCAGA+AGG 0.615324 1:-82078521 None:intergenic
CATACCACCATGGTGAGCAT+AGG 0.615890 1:-82078530 None:intergenic
ATGGAAACTGCCGCAACTGG+AGG 0.618307 1:-82082528 None:intergenic
TCTCCGTTGCTCCATTGCGG+AGG 0.619176 1:+82078256 MsG0180004747.01.T01:CDS
TGATCCTATGCTCACCATGG+TGG 0.621350 1:+82078526 MsG0180004747.01.T01:CDS
ATTCCTCCGCAATGGAGCAA+CGG 0.621982 1:-82078259 None:intergenic
TGCCAAACGCAATTTCTGCT+AGG 0.622423 1:+82081228 MsG0180004747.01.T01:CDS
TCATTTGTGCAGGTGGACAG+TGG 0.623226 1:+82079359 MsG0180004747.01.T01:intron
AAGAACTGTGGAATAGCTTG+AGG 0.628529 1:-82083501 None:intergenic
TTGATAGATGGTGAGTTGAA+GGG 0.630684 1:+82082585 MsG0180004747.01.T01:CDS
ACGAAGGTGACAGGGTCATG+AGG 0.634684 1:+82079682 MsG0180004747.01.T01:intron
GTGGAATGGGAAATTGAGGC+CGG 0.635091 1:+82079433 MsG0180004747.01.T01:CDS
CAGCAATGGACTAGCAACAT+GGG 0.637669 1:-82081484 None:intergenic
AATGGACTAGCAACATGGGA+AGG 0.638945 1:-82081480 None:intergenic
TAATAATATTCCCACCAACT+CGG 0.640755 1:-82078448 None:intergenic
AGGCGAAAGACCGAGTTGGT+GGG 0.643507 1:+82078438 MsG0180004747.01.T01:CDS
AGATGTCCAACTAAGAACTG+TGG 0.655954 1:-82083513 None:intergenic
TTCTGATCCTATGCTCACCA+TGG 0.662399 1:+82078523 MsG0180004747.01.T01:CDS
GAAGAAGGTGAGTGTAACCA+TGG 0.663337 1:-82078126 None:intergenic
TTGACGTATGAAACCCCAGA+AGG 0.670583 1:+82081417 MsG0180004747.01.T01:CDS
ACTGTTGGATCATTCCGGAA+GGG 0.675135 1:+82081194 MsG0180004747.01.T01:CDS
ACGGAGGCGAAAGACCGAGT+TGG 0.675672 1:+82078434 MsG0180004747.01.T01:CDS
ATCAAAAGAAAACACACTGG+AGG 0.688917 1:-82079551 None:intergenic
TGGAGGCTCGAACAAAATGG+TGG 0.692440 1:+82080997 MsG0180004747.01.T01:CDS
ATGATTACAACATACCACCA+TGG 0.703359 1:-82078540 None:intergenic
AAGAGTAGAACCCTTCCAGG+TGG 0.742286 1:-82082850 None:intergenic
CCTCCGTAACAACAACACTG+GGG 0.823141 1:-82078418 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTGTTTTAAATTAAGT+TGG - Chr1:82080400-82080419 None:intergenic 10.0%
!!! TGATTAATATTTAAAATAGA+GGG + Chr1:82080651-82080670 MsG0180004747.01.T01:intron 10.0%
!!! TTGATTAATATTTAAAATAG+AGG + Chr1:82080650-82080669 MsG0180004747.01.T01:intron 10.0%
!! AAGAAAATTAAACAAAAGAA+GGG - Chr1:82079578-82079597 None:intergenic 15.0%
!! ACTATGTTAAATGAAATATA+TGG + Chr1:82079598-82079617 MsG0180004747.01.T01:intron 15.0%
!! ATGAAATAAATCAAAATATC+CGG - Chr1:82080539-82080558 None:intergenic 15.0%
!! CAAATATTCAACTAATAAAA+CGG - Chr1:82081568-82081587 None:intergenic 15.0%
!! TAAGAAAATTAAACAAAAGA+AGG - Chr1:82079579-82079598 None:intergenic 15.0%
!!! AAATTAAGTTGGATATTTTT+TGG - Chr1:82080389-82080408 None:intergenic 15.0%
!!! AATGAATTTTGATTTTGAAT+TGG - Chr1:82078204-82078223 None:intergenic 15.0%
!!! GTCATTTTTTTTAGTAAATT+TGG + Chr1:82078721-82078740 MsG0180004747.01.T01:intron 15.0%
!!! TTTTTATATATATAGGAGTT+TGG + Chr1:82079877-82079896 MsG0180004747.01.T01:intron 15.0%
!! AAAGTTTCTCTTAAAAATAC+CGG + Chr1:82083555-82083574 MsG0180004747.01.T01:CDS 20.0%
!! AAGAAACTTCTTATTCTATT+AGG - Chr1:82079964-82079983 None:intergenic 20.0%
!! AGAAAATTAAACAAAAGAAG+GGG - Chr1:82079577-82079596 None:intergenic 20.0%
!! ATATGATATAATATTGACGA+AGG + Chr1:82079666-82079685 MsG0180004747.01.T01:intron 20.0%
!! CTATAATCTTGTGAAAAAAA+TGG + Chr1:82079046-82079065 MsG0180004747.01.T01:intron 20.0%
!! GATGAAGTAATATTAAAGAA+AGG - Chr1:82080854-82080873 None:intergenic 20.0%
!! TAATGCGAATATTAAAGAAA+AGG - Chr1:82080879-82080898 None:intergenic 20.0%
!! TACAGTTCATAATTTATACT+TGG - Chr1:82082733-82082752 None:intergenic 20.0%
!! TATTGCCAATTAAAAAAACA+AGG - Chr1:82082055-82082074 None:intergenic 20.0%
!! TCATTTATAAGAGGAAAAAT+TGG - Chr1:82080789-82080808 None:intergenic 20.0%
!! TCATTTCATATCAAAATATC+CGG - Chr1:82080584-82080603 None:intergenic 20.0%
!! TGTGATTGATATAATAATAC+TGG - Chr1:82082029-82082048 None:intergenic 20.0%
!! TTAAATGAAATATATGGAAC+TGG + Chr1:82079604-82079623 MsG0180004747.01.T01:intron 20.0%
!! TTCATGTTTATCATTAAGTT+TGG - Chr1:82078886-82078905 None:intergenic 20.0%
!! TTGAATTTATTATGCAAAAG+TGG + Chr1:82082660-82082679 MsG0180004747.01.T01:intron 20.0%
!! TTTCTTTAATATTCGCATTA+AGG + Chr1:82080879-82080898 MsG0180004747.01.T01:intron 20.0%
!!! AAATTTCAGTTTTTAAGAGA+CGG - Chr1:82080024-82080043 None:intergenic 20.0%
!!! AATTATCTGCTATTTTTTAC+CGG - Chr1:82078773-82078792 None:intergenic 20.0%
!!! ACAAATAAGTTATTTCTGAA+TGG + Chr1:82082393-82082412 MsG0180004747.01.T01:intron 20.0%
!!! ATGGATTTGAAATATTCTTT+GGG - Chr1:82079993-82080012 None:intergenic 20.0%
!!! CATAACTCTAAAATATTACA+AGG - Chr1:82082147-82082166 None:intergenic 20.0%
!!! CGTTTTATTAGTTGAATATT+TGG + Chr1:82081566-82081585 MsG0180004747.01.T01:intron 20.0%
!!! GATTTTTCTATAAAAATCAG+AGG - Chr1:82081786-82081805 None:intergenic 20.0%
!!! GTTAGAGTAAATTGTTATTT+TGG + Chr1:82078628-82078647 MsG0180004747.01.T01:intron 20.0%
!!! TAGAGATGTTTTTGTAATTT+TGG + Chr1:82079276-82079295 MsG0180004747.01.T01:intron 20.0%
! AAAATCAGAGGATGATAAAT+AGG - Chr1:82081774-82081793 None:intergenic 25.0%
! AAATCAGAGGATGATAAATA+GGG - Chr1:82081773-82081792 None:intergenic 25.0%
! AAATTGGAAGAAAGGAAAAA+TGG - Chr1:82080773-82080792 None:intergenic 25.0%
! AAGTAAACAACCGATATTTA+AGG - Chr1:82082290-82082309 None:intergenic 25.0%
! AAGTACGTAAAATATGTAAC+AGG - Chr1:82083290-82083309 None:intergenic 25.0%
! ATACTCATTAAGTCAAAGAA+AGG - Chr1:82079482-82079501 None:intergenic 25.0%
! ATGGTGCATTTATCAAATTA+AGG - Chr1:82080754-82080773 None:intergenic 25.0%
! ATTTGCATAGATTAAGACTT+TGG + Chr1:82080047-82080066 MsG0180004747.01.T01:intron 25.0%
! GGTAATGATAACATATTTGT+GGG + Chr1:82082781-82082800 MsG0180004747.01.T01:intron 25.0%
! GTGAGTTTAAACAAATGAAA+AGG - Chr1:82080316-82080335 None:intergenic 25.0%
! GTTCATAATTTATACTTGGA+TGG - Chr1:82082729-82082748 None:intergenic 25.0%
! GTTGTTACTATTAATAAGCT+TGG + Chr1:82079219-82079238 MsG0180004747.01.T01:intron 25.0%
! GTTTCCAATTAAGATAACAA+GGG + Chr1:82078950-82078969 MsG0180004747.01.T01:intron 25.0%
! TATATGATCAAATAACAGAG+AGG - Chr1:82083267-82083286 None:intergenic 25.0%
! TCAGAATCAAAGACAAAATT+TGG + Chr1:82081946-82081965 MsG0180004747.01.T01:intron 25.0%
! TGTTTCCAATTAAGATAACA+AGG + Chr1:82078949-82078968 MsG0180004747.01.T01:intron 25.0%
! TTAACAATAATTTCACAGTC+AGG - Chr1:82082107-82082126 None:intergenic 25.0%
! TTATAGTCTCTAAATTGTCT+TGG + Chr1:82078674-82078693 MsG0180004747.01.T01:intron 25.0%
! TTTGCATAGATTAAGACTTT+GGG + Chr1:82080048-82080067 MsG0180004747.01.T01:intron 25.0%
!! ATTGATAAATTAGCTTCTAG+CGG + Chr1:82078790-82078809 MsG0180004747.01.T01:intron 25.0%
!! GATGGATTTGAAATATTCTT+TGG - Chr1:82079994-82080013 None:intergenic 25.0%
!! GCGGAGATTTTTATATATAT+AGG + Chr1:82079870-82079889 MsG0180004747.01.T01:intron 25.0%
!! GCTTTCATACTTAATTTTGA+AGG - Chr1:82080961-82080980 None:intergenic 25.0%
!! TAAAATGTGTTGTGTAGTTT+TGG + Chr1:82082751-82082770 MsG0180004747.01.T01:intron 25.0%
!! TGGATTTGAAATATTCTTTG+GGG - Chr1:82079992-82080011 None:intergenic 25.0%
!! TGGTAATGATAACATATTTG+TGG + Chr1:82082780-82082799 MsG0180004747.01.T01:intron 25.0%
!! TTCTTTGACTTAATGAGTAT+TGG + Chr1:82079482-82079501 MsG0180004747.01.T01:CDS 25.0%
!! TTTCTTTTCTGTTCAACATA+TGG + Chr1:82081807-82081826 MsG0180004747.01.T01:intron 25.0%
!! TTTTCCAAAACTTACTACTA+CGG + Chr1:82081862-82081881 MsG0180004747.01.T01:intron 25.0%
!!! AAATGTATTTTTACGGATCA+CGG - Chr1:82081083-82081102 None:intergenic 25.0%
!!! AATTTCAGTTTTTAAGAGAC+GGG - Chr1:82080023-82080042 None:intergenic 25.0%
!!! CAGTTCCTTGTTTTTTTAAT+TGG + Chr1:82082047-82082066 MsG0180004747.01.T01:intron 25.0%
!!! GAATTTTGATTTTGAATTGG+AGG - Chr1:82078201-82078220 None:intergenic 25.0%
!!! GATATTTTGCTATAGTTGAT+GGG + Chr1:82081117-82081136 MsG0180004747.01.T01:intron 25.0%
!!! GCTTTTAAGTATTAGTAAAC+TGG + Chr1:82081377-82081396 MsG0180004747.01.T01:CDS 25.0%
!!! TACTACGGATAATTTTGTTT+GGG + Chr1:82081877-82081896 MsG0180004747.01.T01:intron 25.0%
!!! TAGTTGTTTTGTTTGGTTTT+TGG + Chr1:82079159-82079178 MsG0180004747.01.T01:intron 25.0%
!!! TCAGAGCAAATGTATTTTTA+CGG - Chr1:82081090-82081109 None:intergenic 25.0%
!!! TTTTCCCTTGTTATCTTAAT+TGG - Chr1:82078957-82078976 None:intergenic 25.0%
AAACAGGACAATGAAAAAGT+TGG - Chr1:82079791-82079810 None:intergenic 30.0%
AAATGCCTCAACTTATATGA+TGG - Chr1:82082441-82082460 None:intergenic 30.0%
AAGAGGAAAAATTGGAAGAA+AGG - Chr1:82080781-82080800 None:intergenic 30.0%
AATAGGGAAATGTGAAATCA+TGG - Chr1:82081757-82081776 None:intergenic 30.0%
ACCCTATAATATTCAGTTCT+TGG + Chr1:82079900-82079919 MsG0180004747.01.T01:intron 30.0%
ACTGATTGCAACAATTATGT+AGG + Chr1:82081147-82081166 MsG0180004747.01.T01:intron 30.0%
AGAACATAAAAGTAGGTAGT+TGG - Chr1:82079849-82079868 None:intergenic 30.0%
AGAGATATTGAAATGTAGTC+AGG - Chr1:82082467-82082486 None:intergenic 30.0%
AGTATTAGTAAACTGGATAG+TGG + Chr1:82081384-82081403 MsG0180004747.01.T01:CDS 30.0%
ATTAGTTGAATATTTGGACC+TGG + Chr1:82081572-82081591 MsG0180004747.01.T01:intron 30.0%
CACACATAACTCAAACTATA+GGG + Chr1:82080711-82080730 MsG0180004747.01.T01:intron 30.0%
CGTATGGCTGTTAAAATATT+TGG + Chr1:82081982-82082001 MsG0180004747.01.T01:intron 30.0%
CTTAAAAATACCGGATTTGA+GGG + Chr1:82083564-82083583 MsG0180004747.01.T01:CDS 30.0%
CTTTGATAAAATCCCAGAAT+TGG - Chr1:82082896-82082915 None:intergenic 30.0%
GAAAAAAATGGTTACCAAAC+AGG + Chr1:82079058-82079077 MsG0180004747.01.T01:intron 30.0%
GAACTAGGTTCCTTAAATAT+CGG + Chr1:82082277-82082296 MsG0180004747.01.T01:intron 30.0%
GAAGTTAAACACTTGAAACA+AGG - Chr1:82083097-82083116 None:intergenic 30.0%
GATATGAAATGAGACTTTAG+AGG + Chr1:82080592-82080611 MsG0180004747.01.T01:intron 30.0%
GCAATTAAACAAAAGGCTTT+AGG - Chr1:82083380-82083399 None:intergenic 30.0%
GCAGTGTTTGGTAAAATTAA+CGG + Chr1:82078860-82078879 MsG0180004747.01.T01:intron 30.0%
GCCAAGAACTGAATATTATA+GGG - Chr1:82079904-82079923 None:intergenic 30.0%
GGTATTATTAAAAAATCGCG+TGG - Chr1:82082708-82082727 None:intergenic 30.0%
GTTCTACTCTTGAATTACAT+TGG + Chr1:82082862-82082881 MsG0180004747.01.T01:CDS 30.0%
TAAACACTCAACAATCAAAG+AGG - Chr1:82081691-82081710 None:intergenic 30.0%
TAATAATATTCCCACCAACT+CGG - Chr1:82078451-82078470 None:intergenic 30.0%
TACTCTTGAATTACATTGGA+GGG + Chr1:82082866-82082885 MsG0180004747.01.T01:CDS 30.0%
TAGGATTTCAAGAGAAGATT+GGG - Chr1:82080423-82080442 None:intergenic 30.0%
TATCAAGCATTCTGATCTAA+TGG - Chr1:82082571-82082590 None:intergenic 30.0%
TCACACATAACTCAAACTAT+AGG + Chr1:82080710-82080729 MsG0180004747.01.T01:intron 30.0%
TCAGAAGGTTGAAAACTATT+AGG - Chr1:82078509-82078528 None:intergenic 30.0%
TCTTAAAAATACCGGATTTG+AGG + Chr1:82083563-82083582 MsG0180004747.01.T01:CDS 30.0%
TGCTTGTCATCATTTATAAG+AGG - Chr1:82080798-82080817 None:intergenic 30.0%
TTAAAAATACCGGATTTGAG+GGG + Chr1:82083565-82083584 MsG0180004747.01.T01:CDS 30.0%
TTACCAAACAGGTCTAATTT+GGG + Chr1:82079069-82079088 MsG0180004747.01.T01:intron 30.0%
TTAGAAAAACTTACAGACAG+TGG - Chr1:82081513-82081532 None:intergenic 30.0%
TTAGAGCTTCATTTGTAATG+TGG + Chr1:82078576-82078595 MsG0180004747.01.T01:intron 30.0%
TTAGGATTTCAAGAGAAGAT+TGG - Chr1:82080424-82080443 None:intergenic 30.0%
TTAGTTGAATATTTGGACCT+GGG + Chr1:82081573-82081592 MsG0180004747.01.T01:intron 30.0%
! AATGATTTTCATCAGAACTC+TGG + Chr1:82083055-82083074 MsG0180004747.01.T01:intron 30.0%
! ATTTTGTAGAATGCGAGATT+AGG - Chr1:82080442-82080461 None:intergenic 30.0%
! CATTTTGAGCTTATAGTTGA+TGG - Chr1:82079118-82079137 None:intergenic 30.0%
! CCAATATTTCTATGTTCATG+CGG + Chr1:82080101-82080120 MsG0180004747.01.T01:intron 30.0%
! CTACTACGGATAATTTTGTT+TGG + Chr1:82081876-82081895 MsG0180004747.01.T01:intron 30.0%
! CTGCATATTGTGTTAGTTTA+GGG + Chr1:82080172-82080191 MsG0180004747.01.T01:intron 30.0%
! CTTCATTATGTCTTGATGAT+TGG + Chr1:82083221-82083240 MsG0180004747.01.T01:intron 30.0%
! TAAGTATGAAAGCAGCTTTT+GGG + Chr1:82080968-82080987 MsG0180004747.01.T01:CDS 30.0%
! TCTGCATATTGTGTTAGTTT+AGG + Chr1:82080171-82080190 MsG0180004747.01.T01:intron 30.0%
! TTAAGTATGAAAGCAGCTTT+TGG + Chr1:82080967-82080986 MsG0180004747.01.T01:CDS 30.0%
! TTATCCGTAGTAGTAAGTTT+TGG - Chr1:82081869-82081888 None:intergenic 30.0%
! TTGATTCTGAAAACTGTCTA+TGG - Chr1:82081936-82081955 None:intergenic 30.0%
! TTTTGTAAGTATACACGTCT+TGG + Chr1:82081620-82081639 MsG0180004747.01.T01:intron 30.0%
!! AACTACCTACTTTTATGTTC+TGG + Chr1:82079848-82079867 MsG0180004747.01.T01:intron 30.0%
!! AATGTATTTTTACGGATCAC+GGG - Chr1:82081082-82081101 None:intergenic 30.0%
!! AGATGCTTAGTTGTTTTGTT+TGG + Chr1:82079185-82079204 MsG0180004747.01.T01:intron 30.0%
!! AGCTGATTTTTGTCATATAC+AGG + Chr1:82080919-82080938 MsG0180004747.01.T01:intron 30.0%
!! ATAAGTGGCTACACTTTTTA+GGG + Chr1:82080134-82080153 MsG0180004747.01.T01:intron 30.0%
!! ATACATTTGCTCTGAGTTTT+TGG + Chr1:82081095-82081114 MsG0180004747.01.T01:intron 30.0%
!! ATCTTTGAAATCTTGGTCAA+AGG + Chr1:82083158-82083177 MsG0180004747.01.T01:intron 30.0%
!! GAAGAGAATCTTTGAAATCT+TGG + Chr1:82083151-82083170 MsG0180004747.01.T01:intron 30.0%
!! GGATATTTTGCTATAGTTGA+TGG + Chr1:82081116-82081135 MsG0180004747.01.T01:intron 30.0%
!! TTACAAATGAAGCTCTAAAG+AGG - Chr1:82078574-82078593 None:intergenic 30.0%
!! TTTGACTTAATGAGTATTGG+TGG + Chr1:82079485-82079504 MsG0180004747.01.T01:CDS 30.0%
!! TTTGATTTTGAATTGGAGGA+GGG - Chr1:82078197-82078216 None:intergenic 30.0%
!!! ACATGTTGGTAATATGGTTT+TGG + Chr1:82079331-82079350 MsG0180004747.01.T01:intron 30.0%
!!! CAATTCTGGGATTTTATCAA+AGG + Chr1:82082894-82082913 MsG0180004747.01.T01:CDS 30.0%
!!! TTTTGATTTTGAATTGGAGG+AGG - Chr1:82078198-82078217 None:intergenic 30.0%
AAAACTAAAGACCTGCAGTA+AGG - Chr1:82081648-82081667 None:intergenic 35.0%
AAATAAGGCGAAAGTGAAAG+AGG + Chr1:82082981-82083000 MsG0180004747.01.T01:intron 35.0%
AACAACTGAGAGTGAAAAAC+AGG - Chr1:82079807-82079826 None:intergenic 35.0%
AACATATTTGTGGGTTTGAC+AGG + Chr1:82082790-82082809 MsG0180004747.01.T01:intron 35.0%
ACCAACAACTACACAATCAA+CGG - Chr1:82078339-82078358 None:intergenic 35.0%
ACTCTTGAATTACATTGGAG+GGG + Chr1:82082867-82082886 MsG0180004747.01.T01:CDS 35.0%
AGATCAGAATGCTTGATAGA+TGG + Chr1:82082573-82082592 MsG0180004747.01.T01:CDS 35.0%
AGCAGAAGCTATATAGAACT+AGG + Chr1:82082262-82082281 MsG0180004747.01.T01:intron 35.0%
ATAATATTGACGAAGGTGAC+AGG + Chr1:82079673-82079692 MsG0180004747.01.T01:intron 35.0%
ATCAAAAGAAAACACACTGG+AGG - Chr1:82079554-82079573 None:intergenic 35.0%
ATGAAATATATGGAACTGGC+AGG + Chr1:82079608-82079627 MsG0180004747.01.T01:intron 35.0%
ATGACAAAAATCAGCTAAGC+AGG - Chr1:82080915-82080934 None:intergenic 35.0%
ATGATTACAACATACCACCA+TGG - Chr1:82078543-82078562 None:intergenic 35.0%
ATTATTACTGTGGAGAGAGA+TGG + Chr1:82078464-82078483 MsG0180004747.01.T01:CDS 35.0%
ATTTCTGAATGGCCAATTTC+TGG + Chr1:82082404-82082423 MsG0180004747.01.T01:intron 35.0%
CAAAAAACCCGTAATGTTTC+CGG + Chr1:82082219-82082238 MsG0180004747.01.T01:intron 35.0%
CAAAATGGTGGTAGCATTAT+TGG + Chr1:82081009-82081028 MsG0180004747.01.T01:CDS 35.0%
CCAAAAAGCAGTTATCATGA+TGG - Chr1:82079941-82079960 None:intergenic 35.0%
CCGCATGAACATAGAAATAT+TGG - Chr1:82080104-82080123 None:intergenic 35.0%
CCTGAGCATTTGGATTTATA+AGG - Chr1:82083452-82083471 None:intergenic 35.0%
CCTTATAAATCCAAATGCTC+AGG + Chr1:82083449-82083468 MsG0180004747.01.T01:CDS 35.0%
CGCCAAGAACTGAATATTAT+AGG - Chr1:82079905-82079924 None:intergenic 35.0%
CTACTCTTGAATTACATTGG+AGG + Chr1:82082865-82082884 MsG0180004747.01.T01:CDS 35.0%
CTAGATTTGTGTTGTGGAAT+GGG + Chr1:82079420-82079439 MsG0180004747.01.T01:CDS 35.0%
CTATATAGCTTCTGCTATGT+AGG - Chr1:82082258-82082277 None:intergenic 35.0%
CTGTTTGAATTTGCAGTGTT+TGG + Chr1:82078848-82078867 MsG0180004747.01.T01:intron 35.0%
GGTTGTTTACTTCAAATCCA+GGG + Chr1:82082298-82082317 MsG0180004747.01.T01:intron 35.0%
GTAACAAGGTGAAGTTATCT+TGG + Chr1:82081352-82081371 MsG0180004747.01.T01:CDS 35.0%
GTTACCAAACAGGTCTAATT+TGG + Chr1:82079068-82079087 MsG0180004747.01.T01:intron 35.0%
TAATATTGACGAAGGTGACA+GGG + Chr1:82079674-82079693 MsG0180004747.01.T01:intron 35.0%
TCAAAGAAAGGCAAATCAGT+TGG - Chr1:82079470-82079489 None:intergenic 35.0%
TCCGTCTGCAATTAAACAAA+AGG - Chr1:82083387-82083406 None:intergenic 35.0%
TCTCTCTTGTATTGCTTTGA+AGG - Chr1:82081040-82081059 None:intergenic 35.0%
TGCAATTGTTTGAGCTGTTA+TGG + Chr1:82082954-82082973 MsG0180004747.01.T01:intron 35.0%
TGCGGAATTTGTAACATAAG+TGG + Chr1:82080119-82080138 MsG0180004747.01.T01:intron 35.0%
TGGTGGGAATATTATTACTG+TGG + Chr1:82078454-82078473 MsG0180004747.01.T01:CDS 35.0%
TTAGTCGTTCTTTACTATCC+TGG - Chr1:82083037-82083056 None:intergenic 35.0%
TTAGTGATTAGCAGGTTCTA+GGG + Chr1:82081906-82081925 MsG0180004747.01.T01:intron 35.0%
TTATTACTGTGGAGAGAGAT+GGG + Chr1:82078465-82078484 MsG0180004747.01.T01:CDS 35.0%
TTCAATAAGACAAATGACCC+AGG - Chr1:82081593-82081612 None:intergenic 35.0%
TTTAGTGATTAGCAGGTTCT+AGG + Chr1:82081905-82081924 MsG0180004747.01.T01:intron 35.0%
TTTGTTTAATTGCAGACGGA+GGG + Chr1:82083387-82083406 MsG0180004747.01.T01:intron 35.0%
! ACTGGTTTCTTCAGACTTAT+AGG - Chr1:82082011-82082030 None:intergenic 35.0%
! AGCTGTTATGGTGTCAAATA+AGG + Chr1:82082966-82082985 MsG0180004747.01.T01:intron 35.0%
! AGCTTGAGCTATTGTGTTTT+TGG + Chr1:82080218-82080237 MsG0180004747.01.T01:intron 35.0%
! CATTATGTCTTGATGATTGG+TGG + Chr1:82083224-82083243 MsG0180004747.01.T01:intron 35.0%
! GTTTGAGTTATGTGTGACTT+TGG - Chr1:82080707-82080726 None:intergenic 35.0%
! TCTAATGGCTTCTTTTGGAT+AGG - Chr1:82082556-82082575 None:intergenic 35.0%
! TCTGATCTAATGGCTTCTTT+TGG - Chr1:82082561-82082580 None:intergenic 35.0%
! TTGATAGATGGTGAGTTGAA+GGG + Chr1:82082585-82082604 MsG0180004747.01.T01:CDS 35.0%
! TTGATTTTGAATTGGAGGAG+GGG - Chr1:82078196-82078215 None:intergenic 35.0%
! TTTGGTTGTTTCATTTGTGC+AGG + Chr1:82079349-82079368 MsG0180004747.01.T01:intron 35.0%
!! AAGCTTTAAGCTACTTGAAG+TGG + Chr1:82078990-82079009 MsG0180004747.01.T01:intron 35.0%
!! ACTTAATTTTGAAGGATCGC+CGG - Chr1:82080953-82080972 None:intergenic 35.0%
!! AGACGCTTAGTTGTTTTGTT+TGG + Chr1:82079152-82079171 MsG0180004747.01.T01:intron 35.0%
!! ATGTATTTTTACGGATCACG+GGG - Chr1:82081081-82081100 None:intergenic 35.0%
!! CATAAGTGGCTACACTTTTT+AGG + Chr1:82080133-82080152 MsG0180004747.01.T01:intron 35.0%
!! CCATCATGATAACTGCTTTT+TGG + Chr1:82079938-82079957 MsG0180004747.01.T01:intron 35.0%
!! GCCTTTTGTTTAATTGCAGA+CGG + Chr1:82083383-82083402 MsG0180004747.01.T01:intron 35.0%
!! GTTTTATTATCCTCCAGTTG+CGG + Chr1:82082518-82082537 MsG0180004747.01.T01:CDS 35.0%
!! TACCTACTTTTATGTTCTGG+CGG + Chr1:82079851-82079870 MsG0180004747.01.T01:intron 35.0%
!! TCTGGGATTTTATCAAAGGT+AGG + Chr1:82082898-82082917 MsG0180004747.01.T01:intron 35.0%
!! TTTGAAGGACGATCTTGTTT+TGG + Chr1:82079382-82079401 MsG0180004747.01.T01:CDS 35.0%
!! TTTTGTTTAATTGCAGACGG+AGG + Chr1:82083386-82083405 MsG0180004747.01.T01:intron 35.0%
!!! ATGTGTTGTGTAGTTTTGGA+AGG + Chr1:82082755-82082774 MsG0180004747.01.T01:intron 35.0%
!!! GGTTTTGTTTAGTGATTAGC+AGG + Chr1:82081898-82081917 MsG0180004747.01.T01:intron 35.0%
!!! GTCTCTGTAGTTTTTTTCGA+GGG - Chr1:82080685-82080704 None:intergenic 35.0%
!!! TTGAAGGACGATCTTGTTTT+GGG + Chr1:82079383-82079402 MsG0180004747.01.T01:CDS 35.0%
!!! TTGTGTAGTTTTGGAAGGTA+TGG + Chr1:82082760-82082779 MsG0180004747.01.T01:intron 35.0%
AAAAGAAAACACACTGGAGG+AGG - Chr1:82079551-82079570 None:intergenic 40.0%
AAAGTAGGTAGTTGGCTGAA+AGG - Chr1:82079841-82079860 None:intergenic 40.0%
AACACAAATCTAGGTGCATC+AGG - Chr1:82079413-82079432 None:intergenic 40.0%
AACACTTGAAACAAGGTCAC+TGG - Chr1:82083090-82083109 None:intergenic 40.0%
AACATCACCAACGTGAATAC+TGG - Chr1:82081293-82081312 None:intergenic 40.0%
AACTACACAATCAACGGATG+AGG - Chr1:82078333-82078352 None:intergenic 40.0%
AAGAACTGTGGAATAGCTTG+AGG - Chr1:82083504-82083523 None:intergenic 40.0%
AATGGTGGTAGCATTATTGG+TGG + Chr1:82081012-82081031 MsG0180004747.01.T01:CDS 40.0%
ACAATTGGATCCTGAGCATT+TGG - Chr1:82083462-82083481 None:intergenic 40.0%
ACACTGCAAATTCAAACAGC+TGG - Chr1:82078847-82078866 None:intergenic 40.0%
ACCACCTCAAAGTCAAATTC+CGG + Chr1:82078302-82078321 MsG0180004747.01.T01:CDS 40.0%
ACTCTAACCCCCAAAACAAT+TGG - Chr1:82083477-82083496 None:intergenic 40.0%
ACTGGCAGGATAAATAATGC+AGG + Chr1:82079622-82079641 MsG0180004747.01.T01:intron 40.0%
AGAAATTGCGTTTGGCAACA+TGG - Chr1:82081225-82081244 None:intergenic 40.0%
AGAGCCTAAATACACATTCG+AGG - Chr1:82078748-82078767 None:intergenic 40.0%
AGATGTCCAACTAAGAACTG+TGG - Chr1:82083516-82083535 None:intergenic 40.0%
AGCTGATTGTGTCTTCTGTT+TGG - Chr1:82079257-82079276 None:intergenic 40.0%
AGTCGCCATCATATAAGTTG+AGG + Chr1:82082433-82082452 MsG0180004747.01.T01:intron 40.0%
ATGCACCTAGATTTGTGTTG+TGG + Chr1:82079414-82079433 MsG0180004747.01.T01:CDS 40.0%
ATGCCCAAATTAGACCTGTT+TGG - Chr1:82079075-82079094 None:intergenic 40.0%
ATGTGTATTTAGGCTCTGTC+CGG + Chr1:82078751-82078770 MsG0180004747.01.T01:intron 40.0%
CAAAGAAACAACTCCTTCTG+GGG - Chr1:82081433-82081452 None:intergenic 40.0%
CAGGACAATGAAAAAGTTGG+TGG - Chr1:82079788-82079807 None:intergenic 40.0%
CAGTCAGGCACAAATAAACA+AGG - Chr1:82082092-82082111 None:intergenic 40.0%
CCATATTACCAACATGTGTG+AGG - Chr1:82079328-82079347 None:intergenic 40.0%
CCATTCCACAACACAAATCT+AGG - Chr1:82079422-82079441 None:intergenic 40.0%
CCTAGATTTGTGTTGTGGAA+TGG + Chr1:82079419-82079438 MsG0180004747.01.T01:CDS 40.0%
CGGTTGTTTACTTCAAATCC+AGG + Chr1:82082297-82082316 MsG0180004747.01.T01:intron 40.0%
CTTCTGCTATGTAGGATCTA+AGG - Chr1:82082250-82082269 None:intergenic 40.0%
CTTTCCTTCTTCGTTGTTGT+TGG + Chr1:82083006-82083025 MsG0180004747.01.T01:intron 40.0%
CTTTCTACAAAGCATGCTGA+TGG + Chr1:82078392-82078411 MsG0180004747.01.T01:CDS 40.0%
GACATAATGAAGCAGTACAG+CGG - Chr1:82083213-82083232 None:intergenic 40.0%
GCAAAGAAACAACTCCTTCT+GGG - Chr1:82081434-82081453 None:intergenic 40.0%
GCTATGTAGGATCTAAGGAA+TGG - Chr1:82082245-82082264 None:intergenic 40.0%
GCTATTCCACAGTTCTTAGT+TGG + Chr1:82083507-82083526 MsG0180004747.01.T01:CDS 40.0%
GGGATCAAAAGAAAACACAC+TGG - Chr1:82079557-82079576 None:intergenic 40.0%
GTAGATAAGCTAACTGACAG+TGG + Chr1:82078816-82078835 MsG0180004747.01.T01:intron 40.0%
GTCAAACTGTTGGATCATTC+CGG + Chr1:82081189-82081208 MsG0180004747.01.T01:CDS 40.0%
GTTATGTAGTTGTAGTGCAG+TGG + Chr1:82082161-82082180 MsG0180004747.01.T01:intron 40.0%
GTTGATTGTGTAGTTGTTGG+TGG + Chr1:82078338-82078357 MsG0180004747.01.T01:CDS 40.0%
GTTTCCAACAACAACGAAGA+AGG - Chr1:82083013-82083032 None:intergenic 40.0%
TACCTAATGTTTGCACTCCT+TGG - Chr1:82082635-82082654 None:intergenic 40.0%
TACCTAGCAGAAATTGCGTT+TGG - Chr1:82081233-82081252 None:intergenic 40.0%
TACTTCAAATCCAGGGTTTC+AGG + Chr1:82082305-82082324 MsG0180004747.01.T01:intron 40.0%
TATCAGGCGTTCAAAAACCT+CGG - Chr1:82079743-82079762 None:intergenic 40.0%
TATTACCAACATGTGTGAGG+CGG - Chr1:82079325-82079344 None:intergenic 40.0%
TCAGTTCTTGGCGAATGAAA+TGG + Chr1:82079912-82079931 MsG0180004747.01.T01:intron 40.0%
TCATATACAGGTGTCTATGC+CGG + Chr1:82080931-82080950 MsG0180004747.01.T01:intron 40.0%
TGCAAAGAAACAACTCCTTC+TGG - Chr1:82081435-82081454 None:intergenic 40.0%
TGGTCCTCGAATGTGTATTT+AGG + Chr1:82078741-82078760 MsG0180004747.01.T01:intron 40.0%
TGTAATGTGGTGCATGCTAT+TGG + Chr1:82078589-82078608 MsG0180004747.01.T01:intron 40.0%
TGTTGTGGAATGGGAAATTG+AGG + Chr1:82079429-82079448 MsG0180004747.01.T01:CDS 40.0%
TGTTTCACCAGTATTCACGT+TGG + Chr1:82081283-82081302 MsG0180004747.01.T01:intron 40.0%
TTACAGGAACACGATTCACT+AGG - Chr1:82081316-82081335 None:intergenic 40.0%
! AACAAATGAAAAGGAGCGCA+AGG - Chr1:82080307-82080326 None:intergenic 40.0%
! CTTGATAGATGGTGAGTTGA+AGG + Chr1:82082584-82082603 MsG0180004747.01.T01:CDS 40.0%
! GATTTGGTCAATTGCATCCA+CGG + Chr1:82082607-82082626 MsG0180004747.01.T01:CDS 40.0%
! GCTCAGGATCCAATTGTTTT+GGG + Chr1:82083465-82083484 MsG0180004747.01.T01:CDS 40.0%
! GGCTTCTTTTGGATAGGAAA+TGG - Chr1:82082550-82082569 None:intergenic 40.0%
! TCCGTTGATTGTGTAGTTGT+TGG + Chr1:82078335-82078354 MsG0180004747.01.T01:CDS 40.0%
! TCTTGATGATTGGTGGTTCT+GGG + Chr1:82083231-82083250 MsG0180004747.01.T01:intron 40.0%
! TGCTCAGGATCCAATTGTTT+TGG + Chr1:82083464-82083483 MsG0180004747.01.T01:CDS 40.0%
!! CAGTTTTTAAGAGACGGGTT+GGG - Chr1:82080018-82080037 None:intergenic 40.0%
!! CCTCACACATGTTGGTAATA+TGG + Chr1:82079325-82079344 MsG0180004747.01.T01:intron 40.0%
!! CTCAGGATCCAATTGTTTTG+GGG + Chr1:82083466-82083485 MsG0180004747.01.T01:CDS 40.0%
!! CTTCCATAGAAGAGTACTAC+AGG + Chr1:82083187-82083206 MsG0180004747.01.T01:intron 40.0%
!! TCAGTTTTTAAGAGACGGGT+TGG - Chr1:82080019-82080038 None:intergenic 40.0%
!!! AGTTTTTAAGAGACGGGTTG+GGG - Chr1:82080017-82080036 None:intergenic 40.0%
!!! ATTACGGGTTTTTTGCATGC+AGG - Chr1:82082214-82082233 None:intergenic 40.0%
!!! GACTTTGAGGTGGTTTTTGT+GGG - Chr1:82078296-82078315 None:intergenic 40.0%
!!! GGTCTCTGTAGTTTTTTTCG+AGG - Chr1:82080686-82080705 None:intergenic 40.0%
!!! TCAGGATCCAATTGTTTTGG+GGG + Chr1:82083467-82083486 MsG0180004747.01.T01:CDS 40.0%
!!! TGACTTTGAGGTGGTTTTTG+TGG - Chr1:82078297-82078316 None:intergenic 40.0%
AAATCCAGGGTTTCAGGATC+AGG + Chr1:82082311-82082330 MsG0180004747.01.T01:intron 45.0%
AACTGTTGGATCATTCCGGA+AGG + Chr1:82081193-82081212 MsG0180004747.01.T01:CDS 45.0%
AAGCCAAAGCCTATCTCACA+AGG - Chr1:82082347-82082366 None:intergenic 45.0%
AAGCCAAAGGGTCAAACTGT+TGG + Chr1:82081179-82081198 MsG0180004747.01.T01:CDS 45.0%
AATCGCGTGGCAACTTAAAG+TGG - Chr1:82082695-82082714 None:intergenic 45.0%
ACTAGCAACATGGGAAGGAA+TGG - Chr1:82081478-82081497 None:intergenic 45.0%
ACTGTTGGATCATTCCGGAA+GGG + Chr1:82081194-82081213 MsG0180004747.01.T01:CDS 45.0%
AGCCAAAGCCTATCTCACAA+GGG - Chr1:82082346-82082365 None:intergenic 45.0%
AGGAATGGCCGGAAACATTA+CGG - Chr1:82082230-82082249 None:intergenic 45.0%
ATCCCTTGTGAGATAGGCTT+TGG + Chr1:82082341-82082360 MsG0180004747.01.T01:intron 45.0%
ATCGTGTTCCTGTAACCTGT+TGG + Chr1:82081321-82081340 MsG0180004747.01.T01:intron 45.0%
ATGGTGAGCATAGGATCAGA+AGG - Chr1:82078524-82078543 None:intergenic 45.0%
CATCACATCCCTTGTGAGAT+AGG + Chr1:82082335-82082354 MsG0180004747.01.T01:intron 45.0%
CCTGAACAAAAGGCTCTATC+AGG - Chr1:82079759-82079778 None:intergenic 45.0%
CTCCGCCAGAACATAAAAGT+AGG - Chr1:82079856-82079875 None:intergenic 45.0%
GATCCAACAGTTTGACCCTT+TGG - Chr1:82081185-82081204 None:intergenic 45.0%
GCGACTATCATGCCAGAAAT+TGG - Chr1:82082419-82082438 None:intergenic 45.0%
TACTTCAGCTGCTATCTCGT+AGG - Chr1:82083649-82083668 None:intergenic 45.0%
TGCCAAACGCAATTTCTGCT+AGG + Chr1:82081228-82081247 MsG0180004747.01.T01:CDS 45.0%
TGTAGGATCTAAGGAATGGC+CGG - Chr1:82082241-82082260 None:intergenic 45.0%
TGTTGGCAGGTTAGGTAACA+AGG + Chr1:82081338-82081357 MsG0180004747.01.T01:intron 45.0%
TTCAAGAGTAGAACCCTTCC+AGG - Chr1:82082856-82082875 None:intergenic 45.0%
TTCTGATCCTATGCTCACCA+TGG + Chr1:82078523-82078542 MsG0180004747.01.T01:CDS 45.0%
TTGAATTGGAGGAGGGGAAA+GGG - Chr1:82078190-82078209 None:intergenic 45.0%
TTGACGTATGAAACCCCAGA+AGG + Chr1:82081417-82081436 MsG0180004747.01.T01:CDS 45.0%
TTGTTACCTAACCTGCCAAC+AGG - Chr1:82081339-82081358 None:intergenic 45.0%
TTTGAATTGGAGGAGGGGAA+AGG - Chr1:82078191-82078210 None:intergenic 45.0%
! ACAGTTTGACCCTTTGGCTT+TGG - Chr1:82081179-82081198 None:intergenic 45.0%
! AGCCAAGGAGTGCAAACATT+AGG + Chr1:82082630-82082649 MsG0180004747.01.T01:CDS 45.0%
! CCTGATAGAGCCTTTTGTTC+AGG + Chr1:82079756-82079775 MsG0180004747.01.T01:intron 45.0%
! CTCTCCGGAATTTGACTTTG+AGG - Chr1:82078309-82078328 None:intergenic 45.0%
! GATGGGTTTCTTTGGGAAGA+AGG + Chr1:82078482-82078501 MsG0180004747.01.T01:CDS 45.0%
! GATGGTGAGTTGAAGGGATT+TGG + Chr1:82082591-82082610 MsG0180004747.01.T01:CDS 45.0%
! GATTGTGTAGTTGTTGGTGG+TGG + Chr1:82078341-82078360 MsG0180004747.01.T01:CDS 45.0%
! GGAGAGAGATGGGTTTCTTT+GGG + Chr1:82078475-82078494 MsG0180004747.01.T01:CDS 45.0%
! GGTTGTTTCATTTGTGCAGG+TGG + Chr1:82079352-82079371 MsG0180004747.01.T01:intron 45.0%
! GTCTTGATGATTGGTGGTTC+TGG + Chr1:82083230-82083249 MsG0180004747.01.T01:intron 45.0%
! TCCGGAATTTGACTTTGAGG+TGG - Chr1:82078306-82078325 None:intergenic 45.0%
! TCGTTGTTGTTGGAAACTCC+AGG + Chr1:82083016-82083035 MsG0180004747.01.T01:intron 45.0%
! TGAAGTAAGCTTGTCGCTTC+TGG - Chr1:82080827-82080846 None:intergenic 45.0%
! TGGAGAGAGATGGGTTTCTT+TGG + Chr1:82078474-82078493 MsG0180004747.01.T01:CDS 45.0%
! TGTCCCCAGTGTTGTTGTTA+CGG + Chr1:82078415-82078434 MsG0180004747.01.T01:CDS 45.0%
!! AAGCAGCTTTTGGGAAAGTG+TGG + Chr1:82080977-82080996 MsG0180004747.01.T01:CDS 45.0%
!! AATGGACTAGCAACATGGGA+AGG - Chr1:82081483-82081502 None:intergenic 45.0%
!! CAGCAATGGACTAGCAACAT+GGG - Chr1:82081487-82081506 None:intergenic 45.0%
!! GAGTATTGGTGGCAAGATCA+GGG + Chr1:82079496-82079515 MsG0180004747.01.T01:CDS 45.0%
!! TATGTGTCTGGTGTTGCCTT+GGG + Chr1:82083606-82083625 MsG0180004747.01.T01:CDS 45.0%
!! TATTTTTACGGATCACGGGG+TGG - Chr1:82081078-82081097 None:intergenic 45.0%
!! TGAGTATTGGTGGCAAGATC+AGG + Chr1:82079495-82079514 MsG0180004747.01.T01:CDS 45.0%
!!! GATTGGTGGTTCTGGGTTTT+AGG + Chr1:82083238-82083257 MsG0180004747.01.T01:intron 45.0%
!!! GTTTTTAAGAGACGGGTTGG+GGG - Chr1:82080016-82080035 None:intergenic 45.0%
!!! TTGTTTTGGGGGTTAGAGTG+TGG + Chr1:82083478-82083497 MsG0180004747.01.T01:CDS 45.0%
!!! TTTTAAATATTAATCAAATA+TGG - Chr1:82080647-82080666 None:intergenic 5.0%
AAACAAGGTCACTGGACGTC+TGG - Chr1:82083082-82083101 None:intergenic 50.0%
AAAGAGCCTGAGCGATGCAA+AGG - Chr1:82078376-82078395 None:intergenic 50.0%
AAATATCCGGCGCTCAACGA+TGG - Chr1:82080526-82080545 None:intergenic 50.0%
AAGAGTAGAACCCTTCCAGG+TGG - Chr1:82082853-82082872 None:intergenic 50.0%
AAGGAACAGCCCCTCAAATC+CGG - Chr1:82083577-82083596 None:intergenic 50.0%
ACAGACAGTGGTTGCAGCAA+TGG - Chr1:82081501-82081520 None:intergenic 50.0%
ACGTCTTGGTACCTTACTGC+AGG + Chr1:82081634-82081653 MsG0180004747.01.T01:intron 50.0%
AGAAAACACACTGGAGGAGG+AGG - Chr1:82079548-82079567 None:intergenic 50.0%
AGAGTTCGTGCGTCGAATCT+TGG + Chr1:82079715-82079734 MsG0180004747.01.T01:CDS 50.0%
AGCAACGGAGACGGAGAATA+GGG - Chr1:82078247-82078266 None:intergenic 50.0%
AGTTCGTGCGTCGAATCTTG+GGG + Chr1:82079717-82079736 MsG0180004747.01.T01:CDS 50.0%
ATCAACGGATGAGGACTCTC+CGG - Chr1:82078324-82078343 None:intergenic 50.0%
ATGTCCTGATCCTGAAACCC+TGG - Chr1:82082318-82082337 None:intergenic 50.0%
ATTCCTCCGCAATGGAGCAA+CGG - Chr1:82078262-82078281 None:intergenic 50.0%
ATTGGAGGGGCTACCAATTC+TGG + Chr1:82082880-82082899 MsG0180004747.01.T01:CDS 50.0%
ATTTGAGGGGCTGTTCCTTG+GGG + Chr1:82083578-82083597 MsG0180004747.01.T01:CDS 50.0%
CATACCACCATGGTGAGCAT+AGG - Chr1:82078533-82078552 None:intergenic 50.0%
CCTCCGTAACAACAACACTG+GGG - Chr1:82078421-82078440 None:intergenic 50.0%
CGGCCTGTAGTACTCTTCTA+TGG - Chr1:82083193-82083212 None:intergenic 50.0%
CTAACCTGCCAACAGGTTAC+AGG - Chr1:82081332-82081351 None:intergenic 50.0%
CTGTAACCTGTTGGCAGGTT+AGG + Chr1:82081330-82081349 MsG0180004747.01.T01:intron 50.0%
GAAAACACACTGGAGGAGGA+GGG - Chr1:82079547-82079566 None:intergenic 50.0%
GAAATGGAAACTGCCGCAAC+TGG - Chr1:82082534-82082553 None:intergenic 50.0%
GAGTTCGTGCGTCGAATCTT+GGG + Chr1:82079716-82079735 MsG0180004747.01.T01:CDS 50.0%
GATTTGAGGGGCTGTTCCTT+GGG + Chr1:82083577-82083596 MsG0180004747.01.T01:CDS 50.0%
GCAACATGGTAAGTCCCTTC+CGG - Chr1:82081211-82081230 None:intergenic 50.0%
GCCTCCGTAACAACAACACT+GGG - Chr1:82078422-82078441 None:intergenic 50.0%
GGAAAGGGGAATGGAGATGA+GGG - Chr1:82078175-82078194 None:intergenic 50.0%
GGAATGGCCGGAAACATTAC+GGG - Chr1:82082229-82082248 None:intergenic 50.0%
GGAGACGGAGAATAGGGTTA+TGG - Chr1:82078241-82078260 None:intergenic 50.0%
GTGACAGGGTCATGAGGAAT+CGG + Chr1:82079688-82079707 MsG0180004747.01.T01:intron 50.0%
GTGGAATGGGAAATTGAGGC+CGG + Chr1:82079433-82079452 MsG0180004747.01.T01:CDS 50.0%
GTGTGGAGGCTCGAACAAAA+TGG + Chr1:82080994-82081013 MsG0180004747.01.T01:CDS 50.0%
TCAAATCCATCGTTGAGCGC+CGG + Chr1:82080517-82080536 MsG0180004747.01.T01:intron 50.0%
TCATTTGTGCAGGTGGACAG+TGG + Chr1:82079359-82079378 MsG0180004747.01.T01:intron 50.0%
TGAATTGGAGGAGGGGAAAG+GGG - Chr1:82078189-82078208 None:intergenic 50.0%
TGATCCTATGCTCACCATGG+TGG + Chr1:82078526-82078545 MsG0180004747.01.T01:CDS 50.0%
TGGAGGCTCGAACAAAATGG+TGG + Chr1:82080997-82081016 MsG0180004747.01.T01:CDS 50.0%
TGGTGCTCGGTTAGGGAAAA+GGG - Chr1:82082833-82082852 None:intergenic 50.0%
TGTTCCTGTAACCTGTTGGC+AGG + Chr1:82081325-82081344 MsG0180004747.01.T01:intron 50.0%
TTGGAGGGGCTACCAATTCT+GGG + Chr1:82082881-82082900 MsG0180004747.01.T01:CDS 50.0%
! GGTGGTTTTTGTGGGAGATG+CGG - Chr1:82078288-82078307 None:intergenic 50.0%
!! CAGCTTTTGGGAAAGTGTGG+AGG + Chr1:82080980-82080999 MsG0180004747.01.T01:CDS 50.0%
!! CTATGTGTCTGGTGTTGCCT+TGG + Chr1:82083605-82083624 MsG0180004747.01.T01:CDS 50.0%
!! GCAGCAATGGACTAGCAACA+TGG - Chr1:82081488-82081507 None:intergenic 50.0%
!! GGCAAATCAGTTGGCTTTCC+CGG - Chr1:82079461-82079480 None:intergenic 50.0%
!! GTGGCTCTGACCTGAACAAA+AGG - Chr1:82079769-82079788 None:intergenic 50.0%
!! GTTGTTGGTGGTGGTATCAG+TGG + Chr1:82078350-82078369 MsG0180004747.01.T01:CDS 50.0%
AAGGGGAATGGAGATGAGGG+CGG - Chr1:82078172-82078191 None:intergenic 55.0%
AATGGAGATGAGGGCGGAGA+AGG - Chr1:82078166-82078185 None:intergenic 55.0%
ACGAAGGTGACAGGGTCATG+AGG + Chr1:82079682-82079701 MsG0180004747.01.T01:intron 55.0%
AGGCGTCTGCCAAAGCCAAA+GGG + Chr1:82081167-82081186 MsG0180004747.01.T01:intron 55.0%
ATGGAAACTGCCGCAACTGG+AGG - Chr1:82082531-82082550 None:intergenic 55.0%
ATGGAGATGAGGGCGGAGAA+GGG - Chr1:82078165-82078184 None:intergenic 55.0%
CAATTGCATCCACGGAGCCA+AGG + Chr1:82082615-82082634 MsG0180004747.01.T01:CDS 55.0%
CAGACACATAGTTGCCCCCA+AGG - Chr1:82083596-82083615 None:intergenic 55.0%
CAGCCATACGCTCTTGCAGT+AGG - Chr1:82081972-82081991 None:intergenic 55.0%
CGCCTCCGTAACAACAACAC+TGG - Chr1:82078423-82078442 None:intergenic 55.0%
CTTGGGGGCAACTATGTGTC+TGG + Chr1:82083594-82083613 MsG0180004747.01.T01:CDS 55.0%
GAGCAACGGAGACGGAGAAT+AGG - Chr1:82078248-82078267 None:intergenic 55.0%
GCAGGTGGACAGTGGTTTGA+AGG + Chr1:82079367-82079386 MsG0180004747.01.T01:intron 55.0%
GGAGAAGGGTTTGAGAGGGT+GGG - Chr1:82078151-82078170 None:intergenic 55.0%
GGATTTGAGGGGCTGTTCCT+TGG + Chr1:82083576-82083595 MsG0180004747.01.T01:CDS 55.0%
GGGAAAGGGGAATGGAGATG+AGG - Chr1:82078176-82078195 None:intergenic 55.0%
GGTTTGAGAGGGTGGGAAGA+AGG - Chr1:82078144-82078163 None:intergenic 55.0%
GTGGTGCTCGGTTAGGGAAA+AGG - Chr1:82082834-82082853 None:intergenic 55.0%
TAACCGAGCACCACCTGGAA+GGG + Chr1:82082840-82082859 MsG0180004747.01.T01:CDS 55.0%
TAGGCGTCTGCCAAAGCCAA+AGG + Chr1:82081166-82081185 MsG0180004747.01.T01:intron 55.0%
TCCCTCAACACACCTTCCCA+AGG - Chr1:82083625-82083644 None:intergenic 55.0%
TGACACCGCCTCACACATGT+TGG + Chr1:82079317-82079336 MsG0180004747.01.T01:intron 55.0%
TTCCAGGTGGTGCTCGGTTA+GGG - Chr1:82082840-82082859 None:intergenic 55.0%
TTTGAGGGGCTGTTCCTTGG+GGG + Chr1:82083579-82083598 MsG0180004747.01.T01:CDS 55.0%
! ATTGGTGGCAAGATCAGGGC+TGG + Chr1:82079500-82079519 MsG0180004747.01.T01:CDS 55.0%
! CCCCAGTGTTGTTGTTACGG+AGG + Chr1:82078418-82078437 MsG0180004747.01.T01:CDS 55.0%
! GAAAGTGCATCTGCAGCAGC+AGG - Chr1:82082495-82082514 None:intergenic 55.0%
! GCCTTGGGAAGGTGTGTTGA+GGG + Chr1:82083621-82083640 MsG0180004747.01.T01:CDS 55.0%
! GGTTTTTGTGGGAGATGCGG+TGG - Chr1:82078285-82078304 None:intergenic 55.0%
! TGCCTTGGGAAGGTGTGTTG+AGG + Chr1:82083620-82083639 MsG0180004747.01.T01:CDS 55.0%
! TGGCCTACTGCAAGAGCGTA+TGG + Chr1:82081966-82081985 MsG0180004747.01.T01:intron 55.0%
!! AGGCGAAAGACCGAGTTGGT+GGG + Chr1:82078438-82078457 MsG0180004747.01.T01:CDS 55.0%
!! TGTCTGGTGTTGCCTTGGGA+AGG + Chr1:82083610-82083629 MsG0180004747.01.T01:CDS 55.0%
!! TTAAGAGACGGGTTGGGGGA+TGG - Chr1:82080012-82080031 None:intergenic 55.0%
ACGGAGGCGAAAGACCGAGT+TGG + Chr1:82078434-82078453 MsG0180004747.01.T01:CDS 60.0%
AGGGCGGAGAAGGGTTTGAG+AGG - Chr1:82078156-82078175 None:intergenic 60.0%
CAGTGGCCTTTGCATCGCTC+AGG + Chr1:82078367-82078386 MsG0180004747.01.T01:CDS 60.0%
CCGCAATGGAGCAACGGAGA+CGG - Chr1:82078256-82078275 None:intergenic 60.0%
CCGTCTCCGTTGCTCCATTG+CGG + Chr1:82078253-82078272 MsG0180004747.01.T01:CDS 60.0%
CGGAGAAGGGTTTGAGAGGG+TGG - Chr1:82078152-82078171 None:intergenic 60.0%
CTAACCGAGCACCACCTGGA+AGG + Chr1:82082839-82082858 MsG0180004747.01.T01:CDS 60.0%
CTTCCAGGTGGTGCTCGGTT+AGG - Chr1:82082841-82082860 None:intergenic 60.0%
GAACCCTTCCAGGTGGTGCT+CGG - Chr1:82082846-82082865 None:intergenic 60.0%
GGGCGGAGAAGGGTTTGAGA+GGG - Chr1:82078155-82078174 None:intergenic 60.0%
GTTTGCACTCCTTGGCTCCG+TGG - Chr1:82082627-82082646 None:intergenic 60.0%
TCTCCGTTGCTCCATTGCGG+AGG + Chr1:82078256-82078275 MsG0180004747.01.T01:CDS 60.0%
TGGAGGAGGGGAAAGGGGAA+TGG - Chr1:82078184-82078203 None:intergenic 60.0%
TGGGAAATTGAGGCCGGTGC+CGG + Chr1:82079439-82079458 MsG0180004747.01.T01:CDS 60.0%
TTCCCTAACCGAGCACCACC+TGG + Chr1:82082835-82082854 MsG0180004747.01.T01:CDS 60.0%
! GAGGCGAAAGACCGAGTTGG+TGG + Chr1:82078437-82078456 MsG0180004747.01.T01:CDS 60.0%
! TGCGGTGGATTCCTCCGCAA+TGG - Chr1:82078270-82078289 None:intergenic 60.0%
!! AGGGCTGGCTTTGGAGCACT+TGG + Chr1:82079515-82079534 MsG0180004747.01.T01:CDS 60.0%
!! GGCAAGATCAGGGCTGGCTT+TGG + Chr1:82079506-82079525 MsG0180004747.01.T01:CDS 60.0%
!! TCAGTTGGCTTTCCCGGCAC+CGG - Chr1:82079455-82079474 None:intergenic 60.0%
GGGAAATTGAGGCCGGTGCC+GGG + Chr1:82079440-82079459 MsG0180004747.01.T01:CDS 65.0%
TGCGTCGAATCTTGGGGCCG+AGG + Chr1:82079723-82079742 MsG0180004747.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr1 gene 82078128 82083701 82078128 ID=MsG0180004747.01;Name=MsG0180004747.01
Chr1 mRNA 82078128 82083701 82078128 ID=MsG0180004747.01.T01;Parent=MsG0180004747.01;Name=MsG0180004747.01.T01;_AED=0.50;_eAED=0.52;_QI=0|0|0|1|1|1|9|0|540
Chr1 exon 82078128 82078547 82078128 ID=MsG0180004747.01.T01:exon:34596;Parent=MsG0180004747.01.T01
Chr1 exon 82079371 82079558 82079371 ID=MsG0180004747.01.T01:exon:34597;Parent=MsG0180004747.01.T01
Chr1 exon 82079695 82079744 82079695 ID=MsG0180004747.01.T01:exon:34598;Parent=MsG0180004747.01.T01
Chr1 exon 82080941 82081088 82080941 ID=MsG0180004747.01.T01:exon:34599;Parent=MsG0180004747.01.T01
Chr1 exon 82081169 82081249 82081169 ID=MsG0180004747.01.T01:exon:34600;Parent=MsG0180004747.01.T01
Chr1 exon 82081347 82081518 82081347 ID=MsG0180004747.01.T01:exon:34601;Parent=MsG0180004747.01.T01
Chr1 exon 82082492 82082651 82082492 ID=MsG0180004747.01.T01:exon:34602;Parent=MsG0180004747.01.T01
Chr1 exon 82082812 82082915 82082812 ID=MsG0180004747.01.T01:exon:34603;Parent=MsG0180004747.01.T01
Chr1 exon 82083402 82083701 82083402 ID=MsG0180004747.01.T01:exon:34604;Parent=MsG0180004747.01.T01
Chr1 CDS 82078128 82078547 82078128 ID=MsG0180004747.01.T01:cds;Parent=MsG0180004747.01.T01
Chr1 CDS 82079371 82079558 82079371 ID=MsG0180004747.01.T01:cds;Parent=MsG0180004747.01.T01
Chr1 CDS 82079695 82079744 82079695 ID=MsG0180004747.01.T01:cds;Parent=MsG0180004747.01.T01
Chr1 CDS 82080941 82081088 82080941 ID=MsG0180004747.01.T01:cds;Parent=MsG0180004747.01.T01
Chr1 CDS 82081169 82081249 82081169 ID=MsG0180004747.01.T01:cds;Parent=MsG0180004747.01.T01
Chr1 CDS 82081347 82081518 82081347 ID=MsG0180004747.01.T01:cds;Parent=MsG0180004747.01.T01
Chr1 CDS 82082492 82082651 82082492 ID=MsG0180004747.01.T01:cds;Parent=MsG0180004747.01.T01
Chr1 CDS 82082812 82082915 82082812 ID=MsG0180004747.01.T01:cds;Parent=MsG0180004747.01.T01
Chr1 CDS 82083402 82083701 82083402 ID=MsG0180004747.01.T01:cds;Parent=MsG0180004747.01.T01
Gene Sequence

>MsG0180004747.01.T01

ATGGTTACACTCACCTTCTTCCCACCCTCTCAAACCCTTCTCCGCCCTCATCTCCATTCCCCTTTCCCCTCCTCCAATTCAAAATCAAAATTCATTCGCAATCGCAATCACCATAACCCTATTCTCCGTCTCCGTTGCTCCATTGCGGAGGAATCCACCGCATCTCCCACAAAAACCACCTCAAAGTCAAATTCCGGAGAGTCCTCATCCGTTGATTGTGTAGTTGTTGGTGGTGGTATCAGTGGCCTTTGCATCGCTCAGGCTCTTTCTACAAAGCATGCTGATGGTGTCCCCAGTGTTGTTGTTACGGAGGCGAAAGACCGAGTTGGTGGGAATATTATTACTGTGGAGAGAGATGGGTTTCTTTGGGAAGAAGGTCCTAATAGTTTTCAACCTTCTGATCCTATGCTCACCATGGTGGTGGACAGTGGTTTGAAGGACGATCTTGTTTTGGGTGATCCTGATGCACCTAGATTTGTGTTGTGGAATGGGAAATTGAGGCCGGTGCCGGGAAAGCCAACTGATTTGCCTTTCTTTGACTTAATGAGTATTGGTGGCAAGATCAGGGCTGGCTTTGGAGCACTTGGAATTCGCCCTCCTCCTCCAGTGGTCATGAGGAATCGGTTGAAGAGTTCGTGCGTCGAATCTTGGGGCCGAGGTGTCTATGCCGGCGATCCTTCAAAATTAAGTATGAAAGCAGCTTTTGGGAAAGTGTGGAGGCTCGAACAAAATGGTGGTAGCATTATTGGTGGCGCCTTCAAAGCAATACAAGAGAGAAATAAAGCTTCAAAACCACCCCGTGATCCGCGTCTGCCAAAGCCAAAGGGTCAAACTGTTGGATCATTCCGGAAGGGACTTACCATGTTGCCAAACGCAATTTCTGCTAGGTTAGGTAACAAGGTGAAGTTATCTTGGAAGCTTTTAAGTATTAGTAAACTGGATAGTGGAGAGTACAGTTTGACGTATGAAACCCCAGAAGGAGTTGTTTCTTTGCAAAGCAAGACTGTTATCATGACCATTCCTTCCCATGTTGCTAGTCCATTGCTGCAACCACTGTCTCCTGCTGCTGCAGATGCACTTTCAAAGTTTTATTATCCTCCAGTTGCGGCAGTTTCCATTTCCTATCCAAAAGAAGCCATTAGATCAGAATGCTTGATAGATGGTGAGTTGAAGGGATTTGGTCAATTGCATCCACGGAGCCAAGGAGTGCAAACATTAGGAACTATATACAGCTCATCCCTTTTCCCTAACCGAGCACCACCTGGAAGGGTTCTACTCTTGAATTACATTGGAGGGGCTACCAATTCTGGGATTTTATCAAAGACGGAGGGTGAACTTGTTGAAGCAGTTGATCGAGATTTGAGAAAAATCCTTATAAATCCAAATGCTCAGGATCCAATTGTTTTGGGGGTTAGAGTGTGGCCTCAAGCTATTCCACAGTTCTTAGTTGGACATCTTGATCTTCTAGATGCTGCTAAAGTTTCTCTTAAAAATACCGGATTTGAGGGGCTGTTCCTTGGGGGCAACTATGTGTCTGGTGTTGCCTTGGGAAGGTGTGTTGAGGGAGCCTACGAGATAGCAGCTGAAGTAAATGATTTTCTCTCGCAGAGAGTGTACAAGTAG

Protein sequence

>MsG0180004747.01.T01

MVTLTFFPPSQTLLRPHLHSPFPSSNSKSKFIRNRNHHNPILRLRCSIAEESTASPTKTTSKSNSGESSSVDCVVVGGGISGLCIAQALSTKHADGVPSVVVTEAKDRVGGNIITVERDGFLWEEGPNSFQPSDPMLTMVVDSGLKDDLVLGDPDAPRFVLWNGKLRPVPGKPTDLPFFDLMSIGGKIRAGFGALGIRPPPPVVMRNRLKSSCVESWGRGVYAGDPSKLSMKAAFGKVWRLEQNGGSIIGGAFKAIQERNKASKPPRDPRLPKPKGQTVGSFRKGLTMLPNAISARLGNKVKLSWKLLSISKLDSGEYSLTYETPEGVVSLQSKTVIMTIPSHVASPLLQPLSPAAADALSKFYYPPVAAVSISYPKEAIRSECLIDGELKGFGQLHPRSQGVQTLGTIYSSSLFPNRAPPGRVLLLNYIGGATNSGILSKTEGELVEAVDRDLRKILINPNAQDPIVLGVRVWPQAIPQFLVGHLDLLDAAKVSLKNTGFEGLFLGGNYVSGVALGRCVEGAYEIAAEVNDFLSQRVYK*