AlfalfaGEDB | MsG0180003897.01

M. sativa cultivar ZhongmuNo.1 / MsG0180003897.01

KEGG: K02958
GO: GO:0003723 GO:0003735 GO:0005840 GO:0006412 GO:0015935
PFAM: PF00203

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180003897.01.T01	GAU44818.1	100	151	0	0	58	208	2	152	1.31E-104	308

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180003897.01.T01	P31674	89.333	150	16	0	59	208	5	154	1.06E-95	278

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180003897.01.T01	A0A2Z6NJY7	100.000	151	0	0	58	208	2	152	6.26e-105	308

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080048922.01	MsG0180003897.01	0.827545	1.474590e-54	1.427947e-51
MsG0080048933.01	MsG0180003897.01	0.846150	2.602488e-59	4.437340e-56
MsG0180000096.01	MsG0180003897.01	0.864369	1.277721e-64	4.002036e-61
MsG0180000118.01	MsG0180003897.01	0.940222	3.371064e-100	3.635955e-95
MsG0180001169.01	MsG0180003897.01	0.883593	3.933471e-71	2.509861e-67
MsG0180001829.01	MsG0180003897.01	0.918848	9.381893e-87	2.919559e-82
MsG0180001837.01	MsG0180003897.01	0.854282	1.365445e-61	3.034127e-58
MsG0180002738.01	MsG0180003897.01	0.865854	4.365247e-65	1.441346e-61
MsG0180003585.01	MsG0180003897.01	0.877728	4.978105e-69	2.530207e-65
MsG0180003897.01	MsG0180004064.01	0.821568	3.768451e-53	3.076984e-50
MsG0180003897.01	MsG0180004503.01	0.887664	1.169767e-72	8.778228e-69
MsG0180003897.01	MsG0180004829.01	0.919087	6.969483e-87	2.196998e-82
MsG0180003897.01	MsG0180005321.01	0.808923	2.439925e-50	1.412897e-47
MsG0180003897.01	MsG0180005384.01	0.879014	1.760109e-69	9.392380e-66
MsG0180003897.01	MsG0180005573.01	0.842176	3.033624e-58	4.561612e-55
MsG0180003897.01	MsG0180005789.01	0.844986	5.380918e-59	8.838949e-56
MsG0180003897.01	MsG0280006301.01	0.848121	7.499999e-60	1.362103e-56
MsG0180003897.01	MsG0280006629.01	0.935064	1.525459e-96	1.201679e-91
MsG0180003897.01	MsG0280006747.01	0.946903	1.895159e-105	3.198563e-100
MsG0180003897.01	MsG0280006841.01	0.808141	3.583801e-50	2.033208e-47
MsG0180003897.01	MsG0280007055.01	0.941367	4.705284e-101	5.490528e-96
MsG0180003897.01	MsG0280007084.01	0.861768	8.132226e-64	2.326442e-60
MsG0180003897.01	MsG0280007606.01	0.824575	7.492811e-54	6.663570e-51
MsG0180003897.01	MsG0280007995.01	0.887061	1.986330e-72	1.454943e-68
MsG0180003897.01	MsG0280010203.01	0.881774	1.815495e-70	1.077369e-66
MsG0180003897.01	MsG0280010232.01	0.893309	7.087887e-75	6.716485e-71
MsG0180003897.01	MsG0280011308.01	0.812201	4.775694e-51	3.017185e-48
MsG0180003897.01	MsG0380014507.01	0.850291	1.867389e-60	3.640306e-57
MsG0180003897.01	MsG0380015446.01	0.889339	2.646352e-73	2.126501e-69
MsG0180003897.01	MsG0380015494.01	0.833839	4.235682e-56	4.937403e-53
MsG0180003897.01	MsG0380015766.01	0.886005	4.979841e-72	3.494063e-68
MsG0180003897.01	MsG0380015857.01	0.936192	2.570642e-97	2.162327e-92
MsG0180003897.01	MsG0380016183.01	0.807022	6.191131e-50	3.411254e-47
MsG0180003897.01	MsG0380016607.01	0.841748	3.936749e-58	5.840156e-55
MsG0180003897.01	MsG0380016622.01	0.847345	1.226454e-59	2.173230e-56
MsG0180003897.01	MsG0380016653.01	0.891019	5.817316e-74	5.013401e-70
MsG0180003897.01	MsG0380016678.01	0.886279	3.928541e-72	2.787964e-68
MsG0180003897.01	MsG0380016732.01	0.875975	2.016138e-68	9.608448e-65
MsG0180003897.01	MsG0380016744.01	0.928865	1.576587e-92	8.530780e-88
MsG0180003897.01	MsG0380016760.01	0.865340	6.339397e-65	2.055133e-61
MsG0180003897.01	MsG0380016805.01	0.856171	3.852083e-62	9.111746e-59
MsG0180003897.01	MsG0380017119.01	0.820141	8.024198e-53	6.297587e-50
MsG0180003897.01	MsG0480018164.01	0.916958	9.513126e-86	2.680629e-81
MsG0180003897.01	MsG0480019165.01	0.915587	4.928125e-85	1.297751e-80
MsG0180003897.01	MsG0480019632.01	0.847714	9.709701e-60	1.741158e-56
MsG0180003897.01	MsG0480020796.01	0.909494	5.352454e-82	1.044026e-77
MsG0180003897.01	MsG0480020895.01	0.859310	4.519253e-63	1.188290e-59
MsG0180003897.01	MsG0480020911.01	0.873352	1.572204e-67	6.801795e-64
MsG0180003897.01	MsG0480021279.01	0.928659	2.110429e-92	1.128196e-87
MsG0180003897.01	MsG0480021417.01	0.933608	1.448333e-95	1.038954e-90
MsG0180003897.01	MsG0480021879.01	0.826099	3.266270e-54	3.033723e-51
MsG0180003897.01	MsG0480022006.01	0.896400	3.827379e-76	4.133765e-72
MsG0180003897.01	MsG0480022041.01	0.850737	1.399556e-60	2.768365e-57
MsG0180003897.01	MsG0480022363.01	0.846374	2.261082e-59	3.883682e-56
MsG0180003897.01	MsG0480022789.01	0.865123	7.415804e-65	2.385872e-61
MsG0180003897.01	MsG0480022955.01	0.904065	1.811326e-79	2.754292e-75
MsG0180003897.01	MsG0480023380.01	0.921440	3.567725e-88	1.277218e-83
MsG0180003897.01	MsG0480023774.01	0.907004	8.087766e-81	1.405834e-76
MsG0180003897.01	MsG0480023931.01	0.922509	8.964329e-89	3.404580e-84
MsG0180003897.01	MsG0480023970.01	0.845776	3.289073e-59	5.541903e-56
MsG0180003897.01	MsG0480023996.01	0.883981	2.829852e-71	1.833936e-67
MsG0180003897.01	MsG0580024059.01	0.834286	3.272969e-56	3.866579e-53
MsG0180003897.01	MsG0580024481.01	0.869028	4.208012e-66	1.555459e-62
MsG0180003897.01	MsG0580024540.01	0.899565	1.748193e-77	2.173778e-73
MsG0180003897.01	MsG0580024738.01	0.934624	3.026030e-96	2.315599e-91
MsG0180003897.01	MsG0580024894.01	0.851320	9.584372e-61	1.932760e-57
MsG0180003897.01	MsG0580025073.01	0.859117	5.162396e-63	1.348179e-59
MsG0180003897.01	MsG0580025750.01	0.878411	2.870196e-69	1.497152e-65
MsG0180003897.01	MsG0580029702.01	0.845717	3.413032e-59	5.739712e-56
MsG0180003897.01	MsG0580030073.01	0.867713	1.116810e-65	3.937017e-62
MsG0180003897.01	MsG0680031368.01	0.881921	1.605543e-70	9.584753e-67
MsG0180003897.01	MsG0680032459.01	0.856387	3.330774e-62	7.936850e-59
MsG0180003897.01	MsG0680035611.01	0.906281	1.753886e-80	2.949146e-76
MsG0180003897.01	MsG0780036859.01	0.835384	1.731624e-56	2.114170e-53
MsG0180003897.01	MsG0780037290.01	0.841038	6.055303e-58	8.786722e-55
MsG0180003897.01	MsG0780038383.01	0.873734	1.168351e-67	5.124898e-64
MsG0180003897.01	MsG0780039937.01	0.842679	2.232108e-58	3.409752e-55
MsG0180003897.01	MsG0780041058.01	0.848421	6.197517e-60	1.136748e-56
MsG0180003897.01	MsG0780041076.01	0.816284	5.985746e-52	4.223829e-49
MsG0180003897.01	MsG0780041153.01	0.810753	9.855585e-51	5.991093e-48
MsG0180003897.01	MsG0780041240.01	0.879573	1.115781e-69	6.080128e-66
MsG0180003897.01	MsG0780041244.01	0.849650	2.822313e-60	5.387110e-57
MsG0180003897.01	MsG0780041311.01	0.900257	8.775796e-78	1.125666e-73
MsG0180003897.01	MsG0780041522.01	0.888061	8.244420e-73	6.288113e-69
MsG0180003897.01	MsG0780041790.01	0.860753	1.657666e-63	4.580593e-60
MsG0180003897.01	MsG0880041941.01	0.876697	1.136557e-68	5.562925e-65
MsG0180003897.01	MsG0880042209.01	0.823218	1.559459e-53	1.334373e-50
MsG0180003897.01	MsG0880042517.01	0.940018	4.769184e-100	5.084244e-95
MsG0180003897.01	MsG0880042896.01	0.836674	8.149991e-57	1.034331e-53
MsG0180003897.01	MsG0880043076.01	0.900911	4.558602e-78	6.011878e-74
MsG0180003897.01	MsG0880044204.01	0.864657	1.038923e-64	3.287678e-61
MsG0180003897.01	MsG0880045836.01	0.821178	4.635560e-53	3.744286e-50
MsG0180003897.01	MsG0880046220.01	0.864353	1.292850e-64	4.046980e-61
MsG0180003897.01	MsG0880046486.01	0.885433	8.162555e-72	5.601729e-68
MsG0180003897.01	MsG0880046760.01	0.817574	3.073005e-52	2.246196e-49
MsG0180003897.01	MsG0880047310.01	0.821617	3.671235e-53	3.001618e-50

PPI

Gene1	Gene2	Type
MsG0180005366.01	MsG0180003897.01	PPI
MsG0180003897.01	MsG0180005361.01	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180003897.01.T01	MTR_1g070450	99.338	151	1	0	58	208	2	152	5.36e-108	306
MsG0180003897.01.T01	MTR_8g105110	96.078	153	4	1	58	208	2	154	2.52e-103	295
MsG0180003897.01.T01	MTR_4g075450	96.026	151	6	0	58	208	2	152	4.69e-103	294

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180003897.01.T01	AT5G09510	94.040	151	9	0	58	208	2	152	8.54e-95	273
MsG0180003897.01.T01	AT1G04270	94.040	151	9	0	58	208	2	152	1.28e-94	273
MsG0180003897.01.T01	AT5G09500	89.189	148	16	0	61	208	3	150	2.47e-94	272
MsG0180003897.01.T01	AT1G04270	93.377	151	9	1	58	208	2	151	4.81e-92	266
MsG0180003897.01.T01	AT5G09490	82.119	151	27	0	58	208	2	152	1.71e-89	259
MsG0180003897.01.T01	AT5G43640	87.919	149	18	0	60	208	1	149	6.21e-85	248
MsG0180003897.01.T01	AT5G09510	94.915	118	6	0	91	208	1	118	6.41e-71	211
MsG0180003897.01.T01	AT5G63070	62.821	156	50	3	61	208	5	160	2.26e-61	189
MsG0180003897.01.T01	AT1G33850	80.597	67	13	0	60	126	1	67	9.77e-22	85.1

Find 64 sgRNAs with CRISPR-Local

Find 352 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTCTTAAATGTTCTCTTCTT+TGG	0.218192	1:-69806743	None:intergenic
TGACAGATTGCACCTTATTC+TGG	0.268535	1:-69803788	None:intergenic
AAGTTTGCATTGAAAGATAA+TGG	0.308249	1:-69808525	None:intergenic
AGGTGAGTCCTCACTGGTTC+TGG	0.312113	1:-69808284	None:intergenic
CCAGGCCTACCGTGCTTAAC+AGG	0.333020	1:-69808440	None:intergenic
AGTTTGCATTGAAAGATAAT+GGG	0.343042	1:-69808524	None:intergenic
AGATAATGGCCAATCATTTC+AGG	0.354175	1:-69808392	None:intergenic
GATGAGTGCCATAGGCTTGC+GGG	0.362183	1:-69807331	None:intergenic
TGAAATGATTGGCCATTATC+TGG	0.368757	1:+69808394	MsG0180003897.01.T01:CDS
TCTCTGCTCGTGCACGTAGA+AGG	0.369916	1:+69806834	MsG0180003897.01.T01:CDS
GAAATTAAGCCTGAAATGAT+TGG	0.379557	1:+69808383	MsG0180003897.01.T01:CDS
CTTAATTTCAACTTGGTTGA+AGG	0.392478	1:-69808369	None:intergenic
TTGAGAATTCAGCCAGATAA+TGG	0.430982	1:-69808406	None:intergenic
ACTCCTTGTGCAGCTACCTC+TGG	0.435684	1:-69806719	None:intergenic
GAGATGATCGGTAGCATCAT+TGG	0.436840	1:+69808329	MsG0180003897.01.T01:CDS
ACAGTTTGAAGACCAGAATA+AGG	0.446933	1:+69803776	MsG0180003897.01.T01:CDS
TATTATTGACCATTAAAGCT+TGG	0.456102	1:+69808708	MsG0180003897.01.T01:three_prime_UTR
ACAGAAAAGGGAAGCTCCAC+CGG	0.457421	1:+69808253	MsG0180003897.01.T01:intron
TGTTGATCTCGATGCTCTCT+TGG	0.464094	1:+69806781	MsG0180003897.01.T01:CDS
ACAAGAGCTTTCACAACGTC+GGG	0.478547	1:-69802713	None:intergenic
CCTGTTAAGCACGGTAGGCC+TGG	0.480548	1:+69808440	MsG0180003897.01.T01:CDS
CTATAAACCTTATAAAATAG+AGG	0.480900	1:-69808675	None:intergenic
ACTGGTTCTGGCTTCTCACC+CGG	0.493454	1:-69808272	None:intergenic
TTGGTGCTACTCACTCCTCC+AGG	0.496949	1:+69808465	MsG0180003897.01.T01:CDS
TGGTTTGACCCGCAAGCCTA+TGG	0.497772	1:+69807323	MsG0180003897.01.T01:CDS
TTTGATATTGTTGTGACACT+AGG	0.516580	1:+69808588	MsG0180003897.01.T01:three_prime_UTR
TGATGAGTGCCATAGGCTTG+CGG	0.517926	1:-69807332	None:intergenic
ATGATGCTACCGATCATCTC+AGG	0.518042	1:-69808326	None:intergenic
AAGCAGAGAAAATTGAAGCT+TGG	0.531786	1:+69803712	MsG0180003897.01.T01:CDS
CAGGCACAATGATCATGTTA+CGG	0.535956	1:-69808307	None:intergenic
CAGAAAAGGGAAGCTCCACC+GGG	0.540460	1:+69808254	MsG0180003897.01.T01:intron
AAGCACGGTAGGCCTGGTAT+TGG	0.547800	1:+69808446	MsG0180003897.01.T01:CDS
TTTCAGGCTTAATTTCAACT+TGG	0.556240	1:-69808376	None:intergenic
TTACGGAGGTGAGTCCTCAC+TGG	0.565975	1:-69808290	None:intergenic
TGATATCACCTCAGTTGATG+TGG	0.573180	1:-69802755	None:intergenic
GACAAGAGCTTTCACAACGT+CGG	0.573198	1:-69802714	None:intergenic
GAGTGAGTAGCACCAATACC+AGG	0.575625	1:-69808458	None:intergenic
TTTAAGAAGTTCAGTTTCCG+TGG	0.586451	1:+69806758	MsG0180003897.01.T01:CDS
AGCTTCTTGATGAGTGCCAT+AGG	0.595409	1:-69807339	None:intergenic
ACAAGCCTGTTAAGCACGGT+AGG	0.596494	1:+69808435	MsG0180003897.01.T01:CDS
GAACCAGAGGTAGCTGCACA+AGG	0.605663	1:+69806716	MsG0180003897.01.T01:CDS
AGAGCTTTCACAACGTCGGG+AGG	0.611146	1:-69802710	None:intergenic
GTTTGCATTGAAAGATAATG+GGG	0.612938	1:-69808523	None:intergenic
AGCATCATTGGAGTCTACAA+TGG	0.616091	1:+69808341	MsG0180003897.01.T01:CDS
GGTTCTGGCTTCTCACCCGG+TGG	0.618126	1:-69808269	None:intergenic
TCACTTCAGAGGAATAAACC+TGG	0.626759	1:-69808483	None:intergenic
GAGCTTTCACAACGTCGGGA+GGG	0.628888	1:-69802709	None:intergenic
AAGCTTGACAAGTTCATCAG+TGG	0.629931	1:-69806810	None:intergenic
GATGACAATCTTCACTTCAG+AGG	0.634610	1:-69808494	None:intergenic
TCTTACAAGCCTGTTAAGCA+CGG	0.639372	1:+69808431	MsG0180003897.01.T01:CDS
TCAGGCGGATGTTGAACCAG+AGG	0.645787	1:+69806703	MsG0180003897.01.T01:intron
ACTCATCAAGAAGCTCCGCA+AGG	0.648877	1:+69807347	MsG0180003897.01.T01:CDS
ATCATTGTGCCTGAGATGAT+CGG	0.650070	1:+69808317	MsG0180003897.01.T01:CDS
TTGCATTGAAAGATAATGGG+GGG	0.651328	1:-69808521	None:intergenic
ACAGATAACTCACCGCCTTG+CGG	0.662337	1:-69807362	None:intergenic
GACAAGATCCACATCAACTG+AGG	0.680942	1:+69802747	MsG0180003897.01.T01:CDS
TTTGCATTGAAAGATAATGG+GGG	0.699506	1:-69808522	None:intergenic
TCACCAGTAAGATTTAAGTG+AGG	0.707503	1:-69808749	None:intergenic
GCACAATGATCATGTTACGG+AGG	0.711118	1:-69808304	None:intergenic
GTGAGAAGCCAGAACCAGTG+AGG	0.711539	1:+69808276	MsG0180003897.01.T01:CDS
CATCAAGAAGCTCCGCAAGG+CGG	0.735053	1:+69807350	MsG0180003897.01.T01:CDS
CTTCAGAGGAATAAACCTGG+AGG	0.744280	1:-69808480	None:intergenic
GTTCATTTCAGGTTTCAACG+TGG	0.745899	1:+69807303	MsG0180003897.01.T01:intron
GAGCATCGAGATCAACACCA+CGG	0.745908	1:-69806775	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAGATTAGATAATGAAAAAT+TGG	-	Chr1:69805858-69805877	None:intergenic	15.0%
!!	AATAGTAATAAATTATTGAG+GGG	-	Chr1:69805214-69805233	None:intergenic	15.0%
!!	AGAATAGTAATAAATTATTG+AGG	-	Chr1:69805216-69805235	None:intergenic	15.0%
!!	ATATGTATTTCAATAAATCT+TGG	+	Chr1:69802934-69802953	MsG0180003897.01.T01:intron	15.0%
!!	ATATTGAGAAAAATAATACA+AGG	+	Chr1:69803201-69803220	MsG0180003897.01.T01:intron	15.0%
!!	ATTTGGAAATTGTTTATTTA+CGG	+	Chr1:69807517-69807536	MsG0180003897.01.T01:intron	15.0%
!!	GAATAGTAATAAATTATTGA+GGG	-	Chr1:69805215-69805234	None:intergenic	15.0%
!!	TGTAAATGATAGTTTATTTA+CGG	-	Chr1:69803539-69803558	None:intergenic	15.0%
!!	TGTGAATAAAAGTAAATAAA+CGG	-	Chr1:69804509-69804528	None:intergenic	15.0%
!!	TTAAAAATTATGTAATGACA+AGG	-	Chr1:69803643-69803662	None:intergenic	15.0%
!!	TTTATTTGAACAATTCAATT+AGG	-	Chr1:69804291-69804310	None:intergenic	15.0%
!!!	TTCATTTTGTTTTATTTTGT+GGG	+	Chr1:69807082-69807101	MsG0180003897.01.T01:intron	15.0%
!!!	TTTAATCTATTTAAGATTCA+TGG	+	Chr1:69805004-69805023	MsG0180003897.01.T01:intron	15.0%
!!!	TTTCATTTTGTTTTATTTTG+TGG	+	Chr1:69807081-69807100	MsG0180003897.01.T01:intron	15.0%
!!	AACCTAAAATATTCAACATT+TGG	-	Chr1:69807055-69807074	None:intergenic	20.0%
!!	AATAACAAACTTCCAAAATT+AGG	-	Chr1:69803860-69803879	None:intergenic	20.0%
!!	AATATACTGTCTTAAATTTG+GGG	+	Chr1:69807760-69807779	MsG0180003897.01.T01:intron	20.0%
!!	ACAATATACTGTCTTAAATT+TGG	+	Chr1:69807758-69807777	MsG0180003897.01.T01:intron	20.0%
!!	ACCAGTTATAATAATGATAA+CGG	-	Chr1:69806481-69806500	None:intergenic	20.0%
!!	ACTAATACCTTATTAAGTTA+AGG	+	Chr1:69803396-69803415	MsG0180003897.01.T01:intron	20.0%
!!	AGGTTGTATTTATAGATAAA+GGG	-	Chr1:69805191-69805210	None:intergenic	20.0%
!!	ATAAATGTGAAAATGAGAAA+TGG	-	Chr1:69807271-69807290	None:intergenic	20.0%
!!	ATAACAAACTTCCAAAATTA+GGG	-	Chr1:69803859-69803878	None:intergenic	20.0%
!!	ATATTTCAACAGTTTCAAAA+TGG	-	Chr1:69804468-69804487	None:intergenic	20.0%
!!	ATCATAAATAACATAATCAC+TGG	-	Chr1:69804056-69804075	None:intergenic	20.0%
!!	ATCGAAAAGAAATTAACAAA+GGG	+	Chr1:69803164-69803183	MsG0180003897.01.T01:intron	20.0%
!!	ATTGAATTGTTCAAATAAAC+AGG	+	Chr1:69804292-69804311	MsG0180003897.01.T01:intron	20.0%
!!	CAATATACTGTCTTAAATTT+GGG	+	Chr1:69807759-69807778	MsG0180003897.01.T01:intron	20.0%
!!	CTAATACCTTATTAAGTTAA+GGG	+	Chr1:69803397-69803416	MsG0180003897.01.T01:intron	20.0%
!!	CTATAAACCTTATAAAATAG+AGG	-	Chr1:69808678-69808697	None:intergenic	20.0%
!!	GATTTATATGAAGATCAAAT+TGG	-	Chr1:69805042-69805061	None:intergenic	20.0%
!!	TAAAACTTGAAATAAGACAA+TGG	-	Chr1:69806055-69806074	None:intergenic	20.0%
!!	TAACCTAAAAATGATGAAAA+TGG	-	Chr1:69807027-69807046	None:intergenic	20.0%
!!	TGGTAAAATGTTTGTATTTA+GGG	-	Chr1:69806179-69806198	None:intergenic	20.0%
!!	TTAAAATGATAGCAATGATT+GGG	-	Chr1:69808148-69808167	None:intergenic	20.0%
!!	TTGAATTGTTCAAATAAACA+GGG	+	Chr1:69804293-69804312	MsG0180003897.01.T01:intron	20.0%
!!	TTGGTAAAATGTTTGTATTT+AGG	-	Chr1:69806180-69806199	None:intergenic	20.0%
!!	TTTAACAATATGTTCATTTC+AGG	+	Chr1:69807292-69807311	MsG0180003897.01.T01:intron	20.0%
!!	TTTGGAAATTGTTTATTTAC+GGG	+	Chr1:69807518-69807537	MsG0180003897.01.T01:intron	20.0%
!!!	AATATTTTAGATCAAGTAGA+AGG	-	Chr1:69807712-69807731	None:intergenic	20.0%
!!!	ATAATTTTTCCAAGCTTTAA+TGG	-	Chr1:69808720-69808739	None:intergenic	20.0%
!!!	ATATTTTAGATCAAGTAGAA+GGG	-	Chr1:69807711-69807730	None:intergenic	20.0%
!!!	ATTTCAAATCTACATTTTGA+TGG	+	Chr1:69804811-69804830	MsG0180003897.01.T01:intron	20.0%
!!!	CAAAAGAAAGCTAATTTTTA+GGG	-	Chr1:69805160-69805179	None:intergenic	20.0%
!!!	TAAATTTATTTTAGTGTCTG+AGG	-	Chr1:69804543-69804562	None:intergenic	20.0%
!!!	TAAGTTTGGTTCATAAATTA+GGG	+	Chr1:69805287-69805306	MsG0180003897.01.T01:intron	20.0%
!!!	TGTTAGATTTAGTTTCAAAT+TGG	-	Chr1:69806199-69806218	None:intergenic	20.0%
!!!	TTACAATCTAAAATTATCCT+TGG	-	Chr1:69804714-69804733	None:intergenic	20.0%
!!!	TTCATCATTTTTAGGTTATT+TGG	+	Chr1:69807029-69807048	MsG0180003897.01.T01:intron	20.0%
!!!	TTCATTTTAAACTTTTGCTA+TGG	+	Chr1:69808106-69808125	MsG0180003897.01.T01:intron	20.0%
!!!	TTTAAAATGATAGCAATGAT+TGG	-	Chr1:69808149-69808168	None:intergenic	20.0%
!!!	TTTGTTTCCTCTATTTTATA+AGG	+	Chr1:69808668-69808687	MsG0180003897.01.T01:three_prime_UTR	20.0%
!	AAAGCTTGGAAAAATTATAG+TGG	+	Chr1:69808722-69808741	MsG0180003897.01.T01:three_prime_UTR	25.0%
!	AAAGTAATGAATGGATATGA+AGG	-	Chr1:69806997-69807016	None:intergenic	25.0%
!	AAATAGGATCTTCATAGAAA+AGG	+	Chr1:69803090-69803109	MsG0180003897.01.T01:intron	25.0%
!	AAATTCCAAAAGATACAAGA+AGG	+	Chr1:69805366-69805385	MsG0180003897.01.T01:intron	25.0%
!	AACGAAATTTAAATGCCTTT+GGG	+	Chr1:69806270-69806289	MsG0180003897.01.T01:intron	25.0%
!	AACGGAAAATAAAGATTGTT+TGG	-	Chr1:69804491-69804510	None:intergenic	25.0%
!	AAGCTTGGAAAAATTATAGT+GGG	+	Chr1:69808723-69808742	MsG0180003897.01.T01:three_prime_UTR	25.0%
!	AAGTTGAAAAATTGAAGTGT+TGG	+	Chr1:69805505-69805524	MsG0180003897.01.T01:intron	25.0%
!	AAGTTTGCATTGAAAGATAA+TGG	-	Chr1:69808528-69808547	None:intergenic	25.0%
!	AATAGGATCTTCATAGAAAA+GGG	+	Chr1:69803091-69803110	MsG0180003897.01.T01:intron	25.0%
!	ACAAGAAGTAAAAATGTCAA+AGG	-	Chr1:69805760-69805779	None:intergenic	25.0%
!	ACATTTGAACTTAACAGATA+TGG	+	Chr1:69807788-69807807	MsG0180003897.01.T01:intron	25.0%
!	AGAATTAATTACAGACTAGA+CGG	-	Chr1:69804742-69804761	None:intergenic	25.0%
!	AGATGGCTAAAAATAAATAC+GGG	-	Chr1:69805074-69805093	None:intergenic	25.0%
!	AGTAATATTCCAATGCATTA+GGG	+	Chr1:69806393-69806412	MsG0180003897.01.T01:intron	25.0%
!	AGTTAAATCTCTTAGAGATT+AGG	+	Chr1:69804089-69804108	MsG0180003897.01.T01:intron	25.0%
!	AGTTTGCATTGAAAGATAAT+GGG	-	Chr1:69808527-69808546	None:intergenic	25.0%
!	ATATACTGTCTTAAATTTGG+GGG	+	Chr1:69807761-69807780	MsG0180003897.01.T01:intron	25.0%
!	ATATGTAATAATCTCTAACG+AGG	-	Chr1:69803027-69803046	None:intergenic	25.0%
!	CATATTCCACATAATTTAGA+TGG	-	Chr1:69802919-69802938	None:intergenic	25.0%
!	CCAGTTATAATAATGATAAC+GGG	-	Chr1:69806480-69806499	None:intergenic	25.0%
!	CGTTAATCTGATTTATTATG+AGG	+	Chr1:69806967-69806986	MsG0180003897.01.T01:intron	25.0%
!	GAGATGGCTAAAAATAAATA+CGG	-	Chr1:69805075-69805094	None:intergenic	25.0%
!	GAGGTTGTATTTATAGATAA+AGG	-	Chr1:69805192-69805211	None:intergenic	25.0%
!	GATCGAAAAGAAATTAACAA+AGG	+	Chr1:69803163-69803182	MsG0180003897.01.T01:intron	25.0%
!	GATTATTACATATGGATGAT+AGG	+	Chr1:69803034-69803053	MsG0180003897.01.T01:intron	25.0%
!	GTCAAGTTTAATTCAATAAC+AGG	-	Chr1:69807847-69807866	None:intergenic	25.0%
!	TACCAAATTTGTGTATCATT+GGG	+	Chr1:69808082-69808101	MsG0180003897.01.T01:intron	25.0%
!	TATTATTGACCATTAAAGCT+TGG	+	Chr1:69808708-69808727	MsG0180003897.01.T01:three_prime_UTR	25.0%
!	TCGTTAGAGATTATTACATA+TGG	+	Chr1:69803026-69803045	MsG0180003897.01.T01:intron	25.0%
!	TGTATGATTATGTATCTAAC+CGG	+	Chr1:69807910-69807929	MsG0180003897.01.T01:intron	25.0%
!	TTAGAGTTGTATAAGGAATT+TGG	+	Chr1:69807443-69807462	MsG0180003897.01.T01:intron	25.0%
!	TTAGGTGAAATAACATTCTT+TGG	-	Chr1:69804377-69804396	None:intergenic	25.0%
!	TTCTAGTGTATCAAAATTGA+AGG	+	Chr1:69805422-69805441	MsG0180003897.01.T01:intron	25.0%
!	TTCTTAAATGTTCTCTTCTT+TGG	-	Chr1:69806746-69806765	None:intergenic	25.0%
!	TTGTATATCCTTACAGAAAA+GGG	+	Chr1:69808241-69808260	MsG0180003897.01.T01:intron	25.0%
!	TTTGATGAAATGTCTTAATG+AGG	-	Chr1:69806002-69806021	None:intergenic	25.0%
!!	AAACTAACTGCTACTTAAAT+AGG	-	Chr1:69803921-69803940	None:intergenic	25.0%
!!	AAATTATGGGTTCAGAATTT+TGG	+	Chr1:69803943-69803962	MsG0180003897.01.T01:intron	25.0%
!!	AAGTTTGGTTCATAAATTAG+GGG	+	Chr1:69805288-69805307	MsG0180003897.01.T01:intron	25.0%
!!	AGCAGTTAGTTTCAAAATTA+TGG	+	Chr1:69803929-69803948	MsG0180003897.01.T01:intron	25.0%
!!	AGTTCAAGATAGATTTTCTT+GGG	-	Chr1:69803357-69803376	None:intergenic	25.0%
!!	CTTTTGCATTTGTATCTTTT+GGG	+	Chr1:69807601-69807620	MsG0180003897.01.T01:intron	25.0%
!!	GCAAAAGAAAGCTAATTTTT+AGG	-	Chr1:69805161-69805180	None:intergenic	25.0%
!!	GCAGTTAGTTTCAAAATTAT+GGG	+	Chr1:69803930-69803949	MsG0180003897.01.T01:intron	25.0%
!!	GTAAGTTTGGTTCATAAATT+AGG	+	Chr1:69805286-69805305	MsG0180003897.01.T01:intron	25.0%
!!	GTTTAGAATCAATTCAAAAC+TGG	+	Chr1:69804969-69804988	MsG0180003897.01.T01:intron	25.0%
!!	TATCAGTGAACTAAAGTTTT+TGG	+	Chr1:69808612-69808631	MsG0180003897.01.T01:three_prime_UTR	25.0%
!!	TCTTTTGCATTTGTATCTTT+TGG	+	Chr1:69807600-69807619	MsG0180003897.01.T01:intron	25.0%
!!	TTGTTTATTGATGAGCTTTT+TGG	+	Chr1:69808641-69808660	MsG0180003897.01.T01:three_prime_UTR	25.0%
!!!	AAAAATTGAAGTGTTGGATT+TGG	+	Chr1:69805511-69805530	MsG0180003897.01.T01:intron	25.0%
!!!	AAAGAATGTTATTTCACCTA+AGG	+	Chr1:69804376-69804395	MsG0180003897.01.T01:intron	25.0%
!!!	AAATTTTAGGAGCCAATTTT+TGG	+	Chr1:69802818-69802837	MsG0180003897.01.T01:intron	25.0%
!!!	AATCCTTTTTGGTACAATAT+AGG	+	Chr1:69804835-69804854	MsG0180003897.01.T01:intron	25.0%
!!!	ATCCTTTTTGGTACAATATA+GGG	+	Chr1:69804836-69804855	MsG0180003897.01.T01:intron	25.0%
!!!	ATTTTGATGGAAATCCTTTT+TGG	+	Chr1:69804824-69804843	MsG0180003897.01.T01:intron	25.0%
!!!	CAAACTTTTACTTGTTTTAC+TGG	+	Chr1:69808541-69808560	MsG0180003897.01.T01:three_prime_UTR	25.0%
!!!	GATTTTAAAAGCCCTAATTT+TGG	+	Chr1:69803845-69803864	MsG0180003897.01.T01:intron	25.0%
!!!	GTTTTAGTTGTTGAGTAATT+TGG	+	Chr1:69807500-69807519	MsG0180003897.01.T01:intron	25.0%
!!!	GTTTTATGTTCTGTTACTTT+AGG	+	Chr1:69807205-69807224	MsG0180003897.01.T01:intron	25.0%
	AAATACCTAAATGTCTCCTA+TGG	-	Chr1:69806327-69806346	None:intergenic	30.0%
	AACCCAATGATACACAAATT+TGG	-	Chr1:69808087-69808106	None:intergenic	30.0%
	AACCCTATATTGTACCAAAA+AGG	-	Chr1:69804841-69804860	None:intergenic	30.0%
	AAGAAAAATCATGTCACGAT+TGG	+	Chr1:69803882-69803901	MsG0180003897.01.T01:intron	30.0%
	AAGACATTTCATCAAACACT+TGG	+	Chr1:69806006-69806025	MsG0180003897.01.T01:intron	30.0%
	AAGAGAAAGAGATAGAGTTA+GGG	-	Chr1:69806623-69806642	None:intergenic	30.0%
	AATACCTTTACTGACGATAT+TGG	+	Chr1:69803449-69803468	MsG0180003897.01.T01:intron	30.0%
	ACTTCTTGTATGTTTGAACT+TGG	+	Chr1:69805771-69805790	MsG0180003897.01.T01:intron	30.0%
	AGTAATAAATTATTGAGGGG+AGG	-	Chr1:69805211-69805230	None:intergenic	30.0%
	ATCCTGTTGAAGATTTCTAA+AGG	+	Chr1:69805474-69805493	MsG0180003897.01.T01:intron	30.0%
	CAACGAAATTTAAATGCCTT+TGG	+	Chr1:69806269-69806288	MsG0180003897.01.T01:intron	30.0%
	CAAGTTTAATTCAATAGCAG+TGG	+	Chr1:69807971-69807990	MsG0180003897.01.T01:intron	30.0%
	CCCGTTATCATTATTATAAC+TGG	+	Chr1:69806477-69806496	MsG0180003897.01.T01:intron	30.0%
	CTACTTCCCTTAACTTAATA+AGG	-	Chr1:69803406-69803425	None:intergenic	30.0%
	CTTAATTTCAACTTGGTTGA+AGG	-	Chr1:69808372-69808391	None:intergenic	30.0%
	CTTCAAACCCATAAAATCTT+GGG	+	Chr1:69802786-69802805	MsG0180003897.01.T01:intron	30.0%
	CTTGTATATCCTTACAGAAA+AGG	+	Chr1:69808240-69808259	MsG0180003897.01.T01:intron	30.0%
	GAAATTAACACAAGTCCTTA+AGG	-	Chr1:69807239-69807258	None:intergenic	30.0%
	GAAATTAAGCCTGAAATGAT+TGG	+	Chr1:69808383-69808402	MsG0180003897.01.T01:CDS	30.0%
	GAAATTGTTTATTTACGGGA+TGG	+	Chr1:69807522-69807541	MsG0180003897.01.T01:intron	30.0%
	GAAGTAGAACGTAATAGTAA+GGG	+	Chr1:69803419-69803438	MsG0180003897.01.T01:intron	30.0%
	GAATATGTGAATGATGAAGA+TGG	+	Chr1:69806917-69806936	MsG0180003897.01.T01:intron	30.0%
	GAGGAATTGCAATAAAATCT+TGG	+	Chr1:69805723-69805742	MsG0180003897.01.T01:intron	30.0%
	GAGTAATATTCCAATGCATT+AGG	+	Chr1:69806392-69806411	MsG0180003897.01.T01:intron	30.0%
	GATATTGTTAGATCAGATCT+AGG	+	Chr1:69805548-69805567	MsG0180003897.01.T01:intron	30.0%
	GCAAATAAACTCAATGCAAA+TGG	+	Chr1:69806224-69806243	MsG0180003897.01.T01:intron	30.0%
	GTACCAAATTTGTGTATCAT+TGG	+	Chr1:69808081-69808100	MsG0180003897.01.T01:intron	30.0%
	GTCTATCAACAACTTATCTT+AGG	+	Chr1:69804667-69804686	MsG0180003897.01.T01:intron	30.0%
	GTTTGCATTGAAAGATAATG+GGG	-	Chr1:69808526-69808545	None:intergenic	30.0%
	TACATAAGCTGATTATGAGT+TGG	-	Chr1:69804020-69804039	None:intergenic	30.0%
	TATACTGTCTTAAATTTGGG+GGG	+	Chr1:69807762-69807781	MsG0180003897.01.T01:intron	30.0%
	TCAAAATTGAAGGAATTCGA+TGG	+	Chr1:69805432-69805451	MsG0180003897.01.T01:intron	30.0%
	TCCACATAATTTAGATGGAA+TGG	-	Chr1:69802914-69802933	None:intergenic	30.0%
	TCCATTCCATCTAAATTATG+TGG	+	Chr1:69802910-69802929	MsG0180003897.01.T01:intron	30.0%
	TCGAGAACTTTACCAAAAAT+TGG	-	Chr1:69802833-69802852	None:intergenic	30.0%
	TCTTCAAACCCATAAAATCT+TGG	+	Chr1:69802785-69802804	MsG0180003897.01.T01:intron	30.0%
	TCTTTATCAGACGATGAAAT+AGG	+	Chr1:69803074-69803093	MsG0180003897.01.T01:intron	30.0%
	TGAAGATCAAATTGGTTAAG+AGG	-	Chr1:69805034-69805053	None:intergenic	30.0%
	TGACACCATATAATCTGAAT+CGG	+	Chr1:69804226-69804245	MsG0180003897.01.T01:intron	30.0%
	TTATTTCACCTAAGGAATTG+GGG	+	Chr1:69804384-69804403	MsG0180003897.01.T01:intron	30.0%
	TTCAGAGAACTATGTAAGTT+TGG	+	Chr1:69805273-69805292	MsG0180003897.01.T01:intron	30.0%
	TTTCAGGCTTAATTTCAACT+TGG	-	Chr1:69808379-69808398	None:intergenic	30.0%
	TTTGATATTGTTGTGACACT+AGG	+	Chr1:69808588-69808607	MsG0180003897.01.T01:three_prime_UTR	30.0%
!	AAAATAAGTTTGTTTCCACG+AGG	-	Chr1:69804612-69804631	None:intergenic	30.0%
!	AAGATTTTATGGGTTTGAAG+AGG	-	Chr1:69802786-69802805	None:intergenic	30.0%
!	AGTTTGGTTCATAAATTAGG+GGG	+	Chr1:69805289-69805308	MsG0180003897.01.T01:intron	30.0%
!	ATAAGGAATTTGGAGTTTGT+AGG	+	Chr1:69807453-69807472	MsG0180003897.01.T01:intron	30.0%
!	ATCCTTTAGAAATCTTCAAC+AGG	-	Chr1:69805479-69805498	None:intergenic	30.0%
!	GACTAGATTTAAGTTCAATG+TGG	-	Chr1:69806083-69806102	None:intergenic	30.0%
!	GAGACATTTAGGTATTTTCA+AGG	+	Chr1:69806330-69806349	MsG0180003897.01.T01:intron	30.0%
!	GAGTTCAAGATAGATTTTCT+TGG	-	Chr1:69803358-69803377	None:intergenic	30.0%
!	GGCCAAATGTTGAATATTTT+AGG	+	Chr1:69807050-69807069	MsG0180003897.01.T01:intron	30.0%
!	GTAGTATTTTCTGTGATAGA+AGG	+	Chr1:69803488-69803507	MsG0180003897.01.T01:intron	30.0%
!	GTTATTTCACCTAAGGAATT+GGG	+	Chr1:69804383-69804402	MsG0180003897.01.T01:intron	30.0%
!	TTTAAGATCGGCTACTATAT+GGG	+	Chr1:69802962-69802981	MsG0180003897.01.T01:intron	30.0%
!	TTTGCATTGAAAGATAATGG+GGG	-	Chr1:69808525-69808544	None:intergenic	30.0%
!	TTTTCTGCTCTAACAATCTA+GGG	+	Chr1:69805394-69805413	MsG0180003897.01.T01:intron	30.0%
!!	ATCTTGGACTTCTTTAAGAT+CGG	+	Chr1:69802950-69802969	MsG0180003897.01.T01:intron	30.0%
!!	GACAATATTAGGTTGAGTAA+TGG	+	Chr1:69805312-69805331	MsG0180003897.01.T01:intron	30.0%
!!	GCACCATTTTCATCATTTTT+AGG	+	Chr1:69807021-69807040	MsG0180003897.01.T01:intron	30.0%
!!	GTCATCTAATTTGTTGTTTG+AGG	+	Chr1:69808192-69808211	MsG0180003897.01.T01:intron	30.0%
!!	TAATAATGATAACGGGTTGT+TGG	-	Chr1:69806473-69806492	None:intergenic	30.0%
!!	TAGCATTTTGAAGAAATGTG+AGG	+	Chr1:69807134-69807153	MsG0180003897.01.T01:intron	30.0%
!!	TGTTATTTCACCTAAGGAAT+TGG	+	Chr1:69804382-69804401	MsG0180003897.01.T01:intron	30.0%
!!	TTGAGTTGAATCAATTGAGA+TGG	-	Chr1:69805091-69805110	None:intergenic	30.0%
!!	TTTTTGGTAAAGTTCTCGAT+GGG	+	Chr1:69802834-69802853	MsG0180003897.01.T01:intron	30.0%
!!!	AGGTATTAGTTTTTTTGCCA+AGG	-	Chr1:69803386-69803405	None:intergenic	30.0%
!!!	ATTTTTGGTAAAGTTCTCGA+TGG	+	Chr1:69802833-69802852	MsG0180003897.01.T01:intron	30.0%
!!!	ATTTTTTAGTGACCTGACTT+AGG	-	Chr1:69803593-69803612	None:intergenic	30.0%
	AAAAATCATGTCACGATTGG+AGG	+	Chr1:69803885-69803904	MsG0180003897.01.T01:intron	35.0%
	AAATTAGGGGGGACAATATT+AGG	+	Chr1:69805301-69805320	MsG0180003897.01.T01:intron	35.0%
	AACCTGATGATACACAGATT+TGG	-	Chr1:69808013-69808032	None:intergenic	35.0%
	AAGCAGAGAAAATTGAAGCT+TGG	+	Chr1:69803712-69803731	MsG0180003897.01.T01:CDS	35.0%
	AATCTTCCTTGCTAAGGTAA+GGG	-	Chr1:69805703-69805722	None:intergenic	35.0%
	ACAGTTTGAAGACCAGAATA+AGG	+	Chr1:69803776-69803795	MsG0180003897.01.T01:CDS	35.0%
	AGATGGAATGGAAACTACAA+GGG	-	Chr1:69802902-69802921	None:intergenic	35.0%
	ATTAAAGTCCCCAATTCCTT+AGG	-	Chr1:69804395-69804414	None:intergenic	35.0%
	CCTGTGAACTCAAATTATCA+AGG	-	Chr1:69803673-69803692	None:intergenic	35.0%
	CTAAGTCAAGGGATTGATTA+GGG	+	Chr1:69804429-69804448	MsG0180003897.01.T01:intron	35.0%
	CTAGTTTAATTCGATAGCAG+TGG	+	Chr1:69808045-69808064	MsG0180003897.01.T01:intron	35.0%
	GAAGAGAAAGAGATAGAGTT+AGG	-	Chr1:69806624-69806643	None:intergenic	35.0%
	GAGTGATGTCTTATATTCCA+AGG	+	Chr1:69804694-69804713	MsG0180003897.01.T01:intron	35.0%
	GGAACAATATGTATCTGTCA+AGG	-	Chr1:69807826-69807845	None:intergenic	35.0%
	GGAAGTAGAACGTAATAGTA+AGG	+	Chr1:69803418-69803437	MsG0180003897.01.T01:intron	35.0%
	GGTGAAATAACATTCTTTGG+AGG	-	Chr1:69804374-69804393	None:intergenic	35.0%
	GTAATGGTTTGACTCTTTCA+AGG	+	Chr1:69805328-69805347	MsG0180003897.01.T01:intron	35.0%
	TACCAAATCTGTGTATCATC+AGG	+	Chr1:69808008-69808027	MsG0180003897.01.T01:intron	35.0%
	TAGATGGAATGGAAACTACA+AGG	-	Chr1:69802903-69802922	None:intergenic	35.0%
	TAGGTCTAAGTTGTAAGCTA+TGG	-	Chr1:69804272-69804291	None:intergenic	35.0%
	TATCATTTACAACTTGTCGC+CGG	+	Chr1:69803548-69803567	MsG0180003897.01.T01:intron	35.0%
	TATCTTGAACTCTCTTTCCT+TGG	+	Chr1:69803366-69803385	MsG0180003897.01.T01:intron	35.0%
	TCCAAATCCCTCAAAAAGAT+GGG	+	Chr1:69803114-69803133	MsG0180003897.01.T01:intron	35.0%
	TCCAAGTAAAACAGTCCATT+GGG	+	Chr1:69806426-69806445	MsG0180003897.01.T01:intron	35.0%
	TCTAAGTTGTAAGCTATGGT+CGG	-	Chr1:69804268-69804287	None:intergenic	35.0%
	TGACTCTTTCAAGGAATTTG+AGG	+	Chr1:69805337-69805356	MsG0180003897.01.T01:intron	35.0%
	TGTGCATTCAACAATCATAG+TGG	+	Chr1:69805642-69805661	MsG0180003897.01.T01:intron	35.0%
	TTAAGATCGGCTACTATATG+GGG	+	Chr1:69802963-69802982	MsG0180003897.01.T01:intron	35.0%
	TTAGCGCTTAGAGTTGTATA+AGG	+	Chr1:69807436-69807455	MsG0180003897.01.T01:intron	35.0%
	TTGAGAATTCAGCCAGATAA+TGG	-	Chr1:69808409-69808428	None:intergenic	35.0%
	TTTAAGAAGTTCAGTTTCCG+TGG	+	Chr1:69806758-69806777	MsG0180003897.01.T01:CDS	35.0%
	TTTCTGCTCTAACAATCTAG+GGG	+	Chr1:69805395-69805414	MsG0180003897.01.T01:intron	35.0%
!	AGACATCTCCCAAGATTTTA+TGG	-	Chr1:69802797-69802816	None:intergenic	35.0%
!	AGATAATGGCCAATCATTTC+AGG	-	Chr1:69808395-69808414	None:intergenic	35.0%
!	CCTTGATAATTTGAGTTCAC+AGG	+	Chr1:69803670-69803689	MsG0180003897.01.T01:intron	35.0%
!	CTTTTCTGCTCTAACAATCT+AGG	+	Chr1:69805393-69805412	MsG0180003897.01.T01:intron	35.0%
!	GAAAGCCTTCTTGTATCTTT+TGG	-	Chr1:69805374-69805393	None:intergenic	35.0%
!	GAACAATAACGTTAGTCTCT+AGG	-	Chr1:69804571-69804590	None:intergenic	35.0%
!	GACATCTCCCAAGATTTTAT+GGG	-	Chr1:69802796-69802815	None:intergenic	35.0%
!	GCTATGAATTCTGAAGGAAA+TGG	-	Chr1:69806510-69806529	None:intergenic	35.0%
!	GTTTGGTTCATAAATTAGGG+GGG	+	Chr1:69805290-69805309	MsG0180003897.01.T01:intron	35.0%
!	TGAAATGATTGGCCATTATC+TGG	+	Chr1:69808394-69808413	MsG0180003897.01.T01:CDS	35.0%
!	TGCTCTCAAAATCGCATTTT+AGG	-	Chr1:69803972-69803991	None:intergenic	35.0%
!	TGGGAGATGTCTCAAATTTT+AGG	+	Chr1:69802805-69802824	MsG0180003897.01.T01:intron	35.0%
!	TTGGATTTGGTTCAAGTTTG+AGG	+	Chr1:69805524-69805543	MsG0180003897.01.T01:intron	35.0%
!	TTTTGGTAAAGTTCTCGATG+GGG	+	Chr1:69802835-69802854	MsG0180003897.01.T01:intron	35.0%
!!	AAATGCGATTTTGAGAGCAA+AGG	+	Chr1:69803973-69803992	MsG0180003897.01.T01:intron	35.0%
!!	ATAACGGGTTGTTGGATAAT+GGG	-	Chr1:69806465-69806484	None:intergenic	35.0%
!!	CAAATAAACAGGGTTAGTCT+AGG	+	Chr1:69804303-69804322	MsG0180003897.01.T01:intron	35.0%
!!	CTTTAAGATCGGCTACTATA+TGG	+	Chr1:69802961-69802980	MsG0180003897.01.T01:intron	35.0%
!!	GATCTAGGTTTTGTCATCTT+TGG	+	Chr1:69805563-69805582	MsG0180003897.01.T01:intron	35.0%
!!	TCTTGCCGATTCAGATTATA+TGG	-	Chr1:69804234-69804253	None:intergenic	35.0%
!!	TGTTCTGTTACTTTAGGATC+AGG	+	Chr1:69807211-69807230	MsG0180003897.01.T01:intron	35.0%
!!	TTGCATTGAAAGATAATGGG+GGG	-	Chr1:69808524-69808543	None:intergenic	35.0%
	AAGCTTGACAAGTTCATCAG+TGG	-	Chr1:69806813-69806832	None:intergenic	40.0%
	AATCAAGCTCCATGGATTCT+CGG	+	Chr1:69803237-69803256	MsG0180003897.01.T01:intron	40.0%
	ACCACCAATATCGTCAGTAA+AGG	-	Chr1:69803456-69803475	None:intergenic	40.0%
	ACCTCTGCTATGAATTCTGA+AGG	-	Chr1:69806516-69806535	None:intergenic	40.0%
	ACCTTTACTGACGATATTGG+TGG	+	Chr1:69803452-69803471	MsG0180003897.01.T01:intron	40.0%
	AGAAGAGAGTCCTAAGTCAA+GGG	+	Chr1:69804418-69804437	MsG0180003897.01.T01:intron	40.0%
	AGAATGGTGCAAACTGGTAA+AGG	+	Chr1:69802872-69802891	MsG0180003897.01.T01:intron	40.0%
	AGCAAGTTTCACTGCAATCA+TGG	+	Chr1:69806591-69806610	MsG0180003897.01.T01:intron	40.0%
	AGCATCATTGGAGTCTACAA+TGG	+	Chr1:69808341-69808360	MsG0180003897.01.T01:CDS	40.0%
	ATATGGAGAATGGTGCAAAC+TGG	+	Chr1:69802866-69802885	MsG0180003897.01.T01:intron	40.0%
	ATCATTGTGCCTGAGATGAT+CGG	+	Chr1:69808317-69808336	MsG0180003897.01.T01:CDS	40.0%
	ATCATTTACAACTTGTCGCC+GGG	+	Chr1:69803549-69803568	MsG0180003897.01.T01:intron	40.0%
	ATCGACTGCTTCTTCAATGA+AGG	-	Chr1:69803146-69803165	None:intergenic	40.0%
	ATCTTCCTTGCTAAGGTAAG+GGG	-	Chr1:69805702-69805721	None:intergenic	40.0%
	CAATCTTCCTTGCTAAGGTA+AGG	-	Chr1:69805704-69805723	None:intergenic	40.0%
	CAATGCATTAGGGAATGTGT+AGG	+	Chr1:69806403-69806422	MsG0180003897.01.T01:intron	40.0%
	CAGGCACAATGATCATGTTA+CGG	-	Chr1:69808310-69808329	None:intergenic	40.0%
	CCTAAGTCAAGGGATTGATT+AGG	+	Chr1:69804428-69804447	MsG0180003897.01.T01:intron	40.0%
	CCTAATCAATCCCTTGACTT+AGG	-	Chr1:69804431-69804450	None:intergenic	40.0%
	CTACACATTCCCTAATGCAT+TGG	-	Chr1:69806405-69806424	None:intergenic	40.0%
	GAATGGTGCAAACTGGTAAA+GGG	+	Chr1:69802873-69802892	MsG0180003897.01.T01:intron	40.0%
	GATCAAGTATGAAGTACACG+TGG	+	Chr1:69803510-69803529	MsG0180003897.01.T01:intron	40.0%
	GATGACAATCTTCACTTCAG+AGG	-	Chr1:69808497-69808516	None:intergenic	40.0%
	GCTTTAACAATCAAGCTCCA+TGG	+	Chr1:69803229-69803248	MsG0180003897.01.T01:intron	40.0%
	GGTGCTCAGAAAGTAATGAA+TGG	-	Chr1:69807006-69807025	None:intergenic	40.0%
	GTCCAAATCCCTCAAAAAGA+TGG	+	Chr1:69803113-69803132	MsG0180003897.01.T01:intron	40.0%
	GTCCAAGTAAAACAGTCCAT+TGG	+	Chr1:69806425-69806444	MsG0180003897.01.T01:intron	40.0%
	TACCTTAGCAAGGAAGATTG+AGG	+	Chr1:69805704-69805723	MsG0180003897.01.T01:intron	40.0%
	TCACTTCAGAGGAATAAACC+TGG	-	Chr1:69808486-69808505	None:intergenic	40.0%
	TCAGAGAAAACGTGTCACAA+TGG	+	Chr1:69803808-69803827	MsG0180003897.01.T01:intron	40.0%
	TCCTTCAGAATTCATAGCAG+AGG	+	Chr1:69806512-69806531	MsG0180003897.01.T01:intron	40.0%
	TCTTACAAGCCTGTTAAGCA+CGG	+	Chr1:69808431-69808450	MsG0180003897.01.T01:CDS	40.0%
	TGACAGATTGCACCTTATTC+TGG	-	Chr1:69803791-69803810	None:intergenic	40.0%
	TGTATCTAACCGGTTGTGTT+AGG	+	Chr1:69807920-69807939	MsG0180003897.01.T01:intron	40.0%
	TTCCTCAATCTTCCTTGCTA+AGG	-	Chr1:69805709-69805728	None:intergenic	40.0%
!	GACTTCTCCCATCTTTTTGA+GGG	-	Chr1:69803124-69803143	None:intergenic	40.0%
!	TGATATCACCTCAGTTGATG+TGG	-	Chr1:69802758-69802777	None:intergenic	40.0%
!	TTGGGACACGAAAGCATAAT+AGG	-	Chr1:69803339-69803358	None:intergenic	40.0%
!	TTTGTCATCTTTGGAGGCAA+AGG	+	Chr1:69805572-69805591	MsG0180003897.01.T01:intron	40.0%
!	TTTTAGTGACCTGACTTAGG+AGG	-	Chr1:69803590-69803609	None:intergenic	40.0%
!!	AAACAGGGTTAGTCTAGGAA+TGG	+	Chr1:69804308-69804327	MsG0180003897.01.T01:intron	40.0%
!!	CTAGGTTTTGTCATCTTTGG+AGG	+	Chr1:69805566-69805585	MsG0180003897.01.T01:intron	40.0%
!!	CTTTAGGATCAGGATCCTTA+AGG	+	Chr1:69807221-69807240	MsG0180003897.01.T01:intron	40.0%
!!	GATAACGGGTTGTTGGATAA+TGG	-	Chr1:69806466-69806485	None:intergenic	40.0%
!!	GTTCATTTCAGGTTTCAACG+TGG	+	Chr1:69807303-69807322	MsG0180003897.01.T01:intron	40.0%
!!	TCCCATCTTTTTGAGGGATT+TGG	-	Chr1:69803118-69803137	None:intergenic	40.0%
	ACAAGAGCTTTCACAACGTC+GGG	-	Chr1:69802716-69802735	None:intergenic	45.0%
	ACAGCATTGCCTAACACAAC+CGG	-	Chr1:69807932-69807951	None:intergenic	45.0%
	ACGTATTAGCCGAGAATCCA+TGG	-	Chr1:69803249-69803268	None:intergenic	45.0%
	AGACAGTGAATTCATTCGCC+AGG	+	Chr1:69805666-69805685	MsG0180003897.01.T01:intron	45.0%
	AGCTTCTTGATGAGTGCCAT+AGG	-	Chr1:69807342-69807361	None:intergenic	45.0%
	ATGATGCTACCGATCATCTC+AGG	-	Chr1:69808329-69808348	None:intergenic	45.0%
	CATCATCCTCACAACACATC+AGG	-	Chr1:69803276-69803295	None:intergenic	45.0%
	CCTAAATGTCTCCTATGGAG+CGG	-	Chr1:69806322-69806341	None:intergenic	45.0%
	CTTCAGAGGAATAAACCTGG+AGG	-	Chr1:69808483-69808502	None:intergenic	45.0%
	GACAAGAGCTTTCACAACGT+CGG	-	Chr1:69802717-69802736	None:intergenic	45.0%
	GACAAGATCCACATCAACTG+AGG	+	Chr1:69802747-69802766	MsG0180003897.01.T01:CDS	45.0%
	GAGAAGAGAGTCCTAAGTCA+AGG	+	Chr1:69804417-69804436	MsG0180003897.01.T01:intron	45.0%
	GAGATGATCGGTAGCATCAT+TGG	+	Chr1:69808329-69808348	MsG0180003897.01.T01:CDS	45.0%
	GAGGCAAAGGTTGGCATAAT+TGG	+	Chr1:69805585-69805604	MsG0180003897.01.T01:intron	45.0%
	GCACAATGATCATGTTACGG+AGG	-	Chr1:69808307-69808326	None:intergenic	45.0%
	GGAGAAGGCAATATGGAGAA+TGG	+	Chr1:69802856-69802875	MsG0180003897.01.T01:intron	45.0%
	GTCTTTCCTGATGTGTTGTG+AGG	+	Chr1:69803267-69803286	MsG0180003897.01.T01:intron	45.0%
	TAAAGTTCTCGATGGGGAGA+AGG	+	Chr1:69802841-69802860	MsG0180003897.01.T01:intron	45.0%
	TCACCTCTCAAGGATTGCTA+GGG	-	Chr1:69806543-69806562	None:intergenic	45.0%
	TGAATGCACAAAGTGCAGCA+AGG	-	Chr1:69805632-69805651	None:intergenic	45.0%
	TGAGATTAACACAGTCCTCG+TGG	+	Chr1:69804594-69804613	MsG0180003897.01.T01:intron	45.0%
	TGTTGATCTCGATGCTCTCT+TGG	+	Chr1:69806781-69806800	MsG0180003897.01.T01:CDS	45.0%
!	ACTGACGATATTGGTGGTTG+AGG	+	Chr1:69803458-69803477	MsG0180003897.01.T01:intron	45.0%
!	GGACTTCTCCCATCTTTTTG+AGG	-	Chr1:69803125-69803144	None:intergenic	45.0%
!	TCATCTTTGGAGGCAAAGGT+TGG	+	Chr1:69805576-69805595	MsG0180003897.01.T01:intron	45.0%
!	TGGAGCTTCCCTTTTCTGTA+AGG	-	Chr1:69808252-69808271	None:intergenic	45.0%
!!	GGGTTGTTGGATAATGGGTT+TGG	-	Chr1:69806460-69806479	None:intergenic	45.0%
!!!	GCCCAATGGACTGTTTTACT+TGG	-	Chr1:69806430-69806449	None:intergenic	45.0%
	ACAAGCCTGTTAAGCACGGT+AGG	+	Chr1:69808435-69808454	MsG0180003897.01.T01:CDS	50.0%
	ACAGAAAAGGGAAGCTCCAC+CGG	+	Chr1:69808253-69808272	MsG0180003897.01.T01:intron	50.0%
	ACAGATAACTCACCGCCTTG+CGG	-	Chr1:69807365-69807384	None:intergenic	50.0%
	ACAGTTAACTGCCGCTCCAT+AGG	+	Chr1:69806308-69806327	MsG0180003897.01.T01:intron	50.0%
	ACTCATCAAGAAGCTCCGCA+AGG	+	Chr1:69807347-69807366	MsG0180003897.01.T01:CDS	50.0%
	AGGCCAATGCTCTAGTTACC+CGG	-	Chr1:69803570-69803589	None:intergenic	50.0%
	ATGCACCCCTTACCTTAGCA+AGG	+	Chr1:69805694-69805713	MsG0180003897.01.T01:intron	50.0%
	CCGCTCCATAGGAGACATTT+AGG	+	Chr1:69806319-69806338	MsG0180003897.01.T01:intron	50.0%
	CTCACCTCTCAAGGATTGCT+AGG	-	Chr1:69806544-69806563	None:intergenic	50.0%
	GAACCCTAGCAATCCTTGAG+AGG	+	Chr1:69806537-69806556	MsG0180003897.01.T01:intron	50.0%
	GAGTGAGTAGCACCAATACC+AGG	-	Chr1:69808461-69808480	None:intergenic	50.0%
	GGCTACTATATGGGGCACAA+TGG	+	Chr1:69802971-69802990	MsG0180003897.01.T01:intron	50.0%
	GGTTTGGACTCATAGCCCAA+TGG	-	Chr1:69806444-69806463	None:intergenic	50.0%
	TCGATGGGGAGAAGGCAATA+TGG	+	Chr1:69802849-69802868	MsG0180003897.01.T01:intron	50.0%
	TGATGAGTGCCATAGGCTTG+CGG	-	Chr1:69807335-69807354	None:intergenic	50.0%
	TGCTCGCTAAGTGTTCCCAA+AGG	-	Chr1:69806288-69806307	None:intergenic	50.0%
	TTGAGAGCAAAGGACTGACG+AGG	+	Chr1:69803983-69804002	MsG0180003897.01.T01:intron	50.0%
!	GCAGTGAAACTTGCTCGATC+TGG	-	Chr1:69806586-69806605	None:intergenic	50.0%
!!	GAGCATCGAGATCAACACCA+CGG	-	Chr1:69806778-69806797	None:intergenic	50.0%
	AAGCACGGTAGGCCTGGTAT+TGG	+	Chr1:69808446-69808465	MsG0180003897.01.T01:CDS	55.0%
	ACTCCTTGTGCAGCTACCTC+TGG	-	Chr1:69806722-69806741	None:intergenic	55.0%
	AGAGCAAAGGACTGACGAGG+AGG	+	Chr1:69803986-69804005	MsG0180003897.01.T01:intron	55.0%
	AGAGCTTTCACAACGTCGGG+AGG	-	Chr1:69802713-69802732	None:intergenic	55.0%
	CAGAAAAGGGAAGCTCCACC+GGG	+	Chr1:69808254-69808273	MsG0180003897.01.T01:intron	55.0%
	CATCAAGAAGCTCCGCAAGG+CGG	+	Chr1:69807350-69807369	MsG0180003897.01.T01:CDS	55.0%
	GAACCAGAGGTAGCTGCACA+AGG	+	Chr1:69806716-69806735	MsG0180003897.01.T01:CDS	55.0%
	GAGCTTTCACAACGTCGGGA+GGG	-	Chr1:69802712-69802731	None:intergenic	55.0%
	GATGAGTGCCATAGGCTTGC+GGG	-	Chr1:69807334-69807353	None:intergenic	55.0%
	GTGAGAAGCCAGAACCAGTG+AGG	+	Chr1:69808276-69808295	MsG0180003897.01.T01:CDS	55.0%
	TCGCCGGGTAACTAGAGCAT+TGG	+	Chr1:69803564-69803583	MsG0180003897.01.T01:intron	55.0%
	TCTCTGCTCGTGCACGTAGA+AGG	+	Chr1:69806834-69806853	MsG0180003897.01.T01:CDS	55.0%
	TGGTTTGACCCGCAAGCCTA+TGG	+	Chr1:69807323-69807342	MsG0180003897.01.T01:CDS	55.0%
	TTACGGAGGTGAGTCCTCAC+TGG	-	Chr1:69808293-69808312	None:intergenic	55.0%
!!	ACTGGTTCTGGCTTCTCACC+CGG	-	Chr1:69808275-69808294	None:intergenic	55.0%
!!	AGGTGAGTCCTCACTGGTTC+TGG	-	Chr1:69808287-69808306	None:intergenic	55.0%
!!	CTCGATCTGGTTCTTGCTCG+CGG	-	Chr1:69806573-69806592	None:intergenic	55.0%
!!	GAGCATTGGCCTCCTAAGTC+AGG	+	Chr1:69803578-69803597	MsG0180003897.01.T01:intron	55.0%
!!	TTGGTGCTACTCACTCCTCC+AGG	+	Chr1:69808465-69808484	MsG0180003897.01.T01:CDS	55.0%
	CCAGGCCTACCGTGCTTAAC+AGG	-	Chr1:69808443-69808462	None:intergenic	60.0%
	CCTGTTAAGCACGGTAGGCC+TGG	+	Chr1:69808440-69808459	MsG0180003897.01.T01:CDS	60.0%
	CGGCTGCTTCTCACCTCTCA+AGG	-	Chr1:69806553-69806572	None:intergenic	60.0%
!!	GTAAGGGGTGCATCGACTCC+TGG	-	Chr1:69805687-69805706	None:intergenic	60.0%
!!	GGTTCTGGCTTCTCACCCGG+TGG	-	Chr1:69808272-69808291	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
Chr1	gene	69802704	69808758	69802704	ID=MsG0180003897.01;Name=MsG0180003897.01
Chr1	mRNA	69802704	69808758	69802704	ID=MsG0180003897.01.T01;Parent=MsG0180003897.01;Name=MsG0180003897.01.T01;_AED=0.46;_eAED=0.46;_QI=0\|0.5\|0.6\|0.6\|0.75\|0.6\|5\|253\|208
Chr1	exon	69802704	69802768	69802704	ID=MsG0180003897.01.T01:exon:24443;Parent=MsG0180003897.01.T01
Chr1	exon	69803692	69803797	69803692	ID=MsG0180003897.01.T01:exon:24444;Parent=MsG0180003897.01.T01
Chr1	exon	69806707	69806855	69806707	ID=MsG0180003897.01.T01:exon:24445;Parent=MsG0180003897.01.T01
Chr1	exon	69807314	69807371	69807314	ID=MsG0180003897.01.T01:exon:24446;Parent=MsG0180003897.01.T01
Chr1	exon	69808257	69808758	69808257	ID=MsG0180003897.01.T01:exon:24447;Parent=MsG0180003897.01.T01
Chr1	CDS	69802704	69802768	69802704	ID=MsG0180003897.01.T01:cds;Parent=MsG0180003897.01.T01
Chr1	CDS	69803692	69803797	69803692	ID=MsG0180003897.01.T01:cds;Parent=MsG0180003897.01.T01
Chr1	CDS	69806707	69806855	69806707	ID=MsG0180003897.01.T01:cds;Parent=MsG0180003897.01.T01
Chr1	CDS	69807314	69807371	69807314	ID=MsG0180003897.01.T01:cds;Parent=MsG0180003897.01.T01
Chr1	CDS	69808257	69808505	69808257	ID=MsG0180003897.01.T01:cds;Parent=MsG0180003897.01.T01
Chr1	three_prime_UTR	69808506	69808758	69808506	ID=MsG0180003897.01.T01:three_prime_utr;Parent=MsG0180003897.01.T01

Gene Sequence

>MsG0180003897.01.T01

ATGTTCCCTCCCGACGTTGTGAAAGCTCTTGTCTTCGCTAGAAGACAAGATCCACATCAACTGAGGCAAGCTCATACAACAAGAAAAGCAGAGAAAATTGAAGCTTGGAAAGAATGTGAATACGTGTCACGATTACTGAAAATCGTGACACAGTTTGAAGACCAGAATAAGGCGGATGTTGAACCAGAGGTAGCTGCACAAGGAGTGCCAAAGAAGAGAACATTTAAGAAGTTCAGTTTCCGTGGTGTTGATCTCGATGCTCTCTTGGATATGTCCACTGATGAACTTGTCAAGCTTTTCTCTGCTCGTGCACGTAGAAGGTTTCAACGTGGTTTGACCCGCAAGCCTATGGCACTCATCAAGAAGCTCCGCAAGGCGAAAAGGGAAGCTCCACCGGGTGAGAAGCCAGAACCAGTGAGGACTCACCTCCGTAACATGATCATTGTGCCTGAGATGATCGGTAGCATCATTGGAGTCTACAATGGAAAGACCTTCAACCAAGTTGAAATTAAGCCTGAAATGATTGGCCATTATCTGGCTGAATTCTCAATCTCTTACAAGCCTGTTAAGCACGGTAGGCCTGGTATTGGTGCTACTCACTCCTCCAGGTTTATTCCTCTGAAGTGA

Protein sequence

>MsG0180003897.01.T01

MFPPDVVKALVFARRQDPHQLRQAHTTRKAEKIEAWKECEYVSRLLKIVTQFEDQNKADVEPEVAAQGVPKKRTFKKFSFRGVDLDALLDMSTDELVKLFSARARRRFQRGLTRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK*