AlfalfaGEDB | MsG0280006747.01

M. sativa cultivar ZhongmuNo.1 / MsG0280006747.01

KEGG: K02877
GO: GO:0003735 GO:0005622 GO:0005840 GO:0006412
PFAM: PF00827

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280006747.01.T01	XP_013461067.1	100	204	0	0	1	204	1	204	7.37E-146	414

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280006747.01.T01	O82528	88.235	204	24	0	1	204	1	204	7.87E-131	369

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280006747.01.T01	G7ISD7	99.510	204	1	0	1	204	49	252	9.79e-146	415

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080048040.01	MsG0280006747.01	0.838970	2.095851e-57	2.852892e-54
MsG0080048922.01	MsG0280006747.01	0.873908	1.020715e-67	4.504654e-64
MsG0080048933.01	MsG0280006747.01	0.841921	3.544664e-58	5.287332e-55
MsG0180000096.01	MsG0280006747.01	0.890871	6.658147e-74	5.699668e-70
MsG0180000118.01	MsG0280006747.01	0.925980	8.773872e-91	4.035670e-86
MsG0180001169.01	MsG0280006747.01	0.928771	1.799964e-92	9.689324e-88
MsG0180001829.01	MsG0280006747.01	0.918440	1.554203e-86	4.729801e-82
MsG0180001837.01	MsG0280006747.01	0.850675	1.456635e-60	2.875405e-57
MsG0180002738.01	MsG0280006747.01	0.880179	6.792150e-70	3.789270e-66
MsG0180003585.01	MsG0280006747.01	0.897221	1.735258e-76	1.941151e-72
MsG0180003897.01	MsG0280006747.01	0.946903	1.895159e-105	3.198563e-100
MsG0180004064.01	MsG0280006747.01	0.857921	1.174178e-62	2.945530e-59
MsG0180004503.01	MsG0280006747.01	0.881702	1.927398e-70	1.140928e-66
MsG0180004829.01	MsG0280006747.01	0.885126	1.063398e-71	7.211100e-68
MsG0180004946.01	MsG0280006747.01	0.802066	6.690908e-49	3.246622e-46
MsG0180005384.01	MsG0280006747.01	0.876334	1.516709e-68	7.324509e-65
MsG0180005573.01	MsG0280006747.01	0.878547	2.571593e-69	1.348347e-65
MsG0180005789.01	MsG0280006747.01	0.832546	8.885894e-56	9.964248e-53
MsG0280006301.01	MsG0280006747.01	0.877335	6.823812e-69	3.418632e-65
MsG0280006629.01	MsG0280006747.01	0.906990	8.209122e-81	1.426071e-76
MsG0280006747.01	MsG0280007055.01	0.934789	2.340231e-96	1.812433e-91
MsG0280006747.01	MsG0280007084.01	0.878698	2.275183e-69	1.199845e-65
MsG0280006747.01	MsG0280007606.01	0.849763	2.623918e-60	5.027173e-57
MsG0280006747.01	MsG0280007995.01	0.865355	6.270348e-65	2.033903e-61
MsG0280006747.01	MsG0280010203.01	0.838885	2.203945e-57	2.992415e-54
MsG0280006747.01	MsG0280010232.01	0.885183	1.012828e-71	6.883209e-68
MsG0280006747.01	MsG0280011308.01	0.816852	4.465511e-52	3.200294e-49
MsG0280006747.01	MsG0380012367.01	0.802842	4.630305e-49	2.291740e-46
MsG0280006747.01	MsG0380014507.01	0.831597	1.525549e-55	1.663413e-52
MsG0280006747.01	MsG0380015402.01	0.819004	1.458013e-52	1.108698e-49
MsG0280006747.01	MsG0380015446.01	0.872967	2.115669e-67	9.024621e-64
MsG0280006747.01	MsG0380015494.01	0.804076	2.569141e-49	1.312450e-46
MsG0280006747.01	MsG0380015766.01	0.865156	7.242193e-65	2.332876e-61
MsG0280006747.01	MsG0380015857.01	0.942947	2.907519e-102	3.775041e-97
MsG0280006747.01	MsG0380016183.01	0.809079	2.259147e-50	1.313750e-47
MsG0280006747.01	MsG0380016607.01	0.838499	2.774047e-57	3.722329e-54
MsG0280006747.01	MsG0380016622.01	0.805250	1.461500e-49	7.694551e-47
MsG0280006747.01	MsG0380016653.01	0.863470	2.433464e-64	7.384207e-61
MsG0280006747.01	MsG0380016678.01	0.881177	2.981936e-70	1.729296e-66
MsG0280006747.01	MsG0380016732.01	0.825991	3.465747e-54	3.209233e-51
MsG0280006747.01	MsG0380016744.01	0.914056	2.998136e-84	7.309886e-80
MsG0280006747.01	MsG0380016760.01	0.917234	6.808344e-86	1.944176e-81
MsG0280006747.01	MsG0380016805.01	0.854239	1.404886e-61	3.117550e-58
MsG0280006747.01	MsG0380017119.01	0.846239	2.460595e-59	4.207658e-56
MsG0280006747.01	MsG0380017385.01	-0.816221	6.182987e-52	4.355367e-49
MsG0280006747.01	MsG0380018056.01	0.824434	8.088081e-54	7.162891e-51
MsG0280006747.01	MsG0480018164.01	0.910697	1.401593e-82	2.898289e-78
MsG0280006747.01	MsG0480019165.01	0.910920	1.091095e-82	2.281345e-78
MsG0280006747.01	MsG0480019632.01	0.843374	1.457475e-58	2.275906e-55
MsG0280006747.01	MsG0480020796.01	0.915995	3.028493e-85	8.145807e-81
MsG0280006747.01	MsG0480020895.01	0.835582	1.543322e-56	1.895304e-53
MsG0280006747.01	MsG0480020911.01	0.874847	4.905346e-68	2.242629e-64
MsG0280006747.01	MsG0480021279.01	0.915693	4.344731e-85	1.150048e-80
MsG0280006747.01	MsG0480021417.01	0.921883	2.016700e-88	7.386896e-84
MsG0280006747.01	MsG0480021879.01	0.849417	3.277869e-60	6.209330e-57
MsG0280006747.01	MsG0480022006.01	0.907800	3.423660e-81	6.170626e-77
MsG0280006747.01	MsG0480022041.01	0.810496	1.119992e-50	6.761381e-48
MsG0280006747.01	MsG0480022302.01	0.848892	4.588516e-60	8.545574e-57
MsG0280006747.01	MsG0480022363.01	0.866596	2.540373e-65	8.610235e-62
MsG0280006747.01	MsG0480022789.01	0.841011	6.152914e-58	8.920936e-55
MsG0280006747.01	MsG0480022955.01	0.897356	1.523030e-76	1.714206e-72
MsG0280006747.01	MsG0480023380.01	0.893896	4.100396e-75	3.984508e-71
MsG0280006747.01	MsG0480023774.01	0.938677	4.529194e-99	4.433507e-94
MsG0280006747.01	MsG0480023931.01	0.908635	1.378293e-81	2.580703e-77
MsG0280006747.01	MsG0480023941.01	0.823604	1.266474e-53	1.095619e-50
MsG0280006747.01	MsG0480023970.01	0.837415	5.267477e-57	6.837212e-54
MsG0280006747.01	MsG0480023996.01	0.936292	2.193699e-97	1.856744e-92
MsG0280006747.01	MsG0580024059.01	0.837298	5.644113e-57	7.299578e-54
MsG0280006747.01	MsG0580024481.01	0.878836	2.033295e-69	1.077313e-65
MsG0280006747.01	MsG0580024540.01	0.901413	2.746599e-78	3.706334e-74
MsG0280006747.01	MsG0580024738.01	0.931821	2.141879e-94	1.385978e-89
MsG0280006747.01	MsG0580024894.01	0.859186	4.921403e-63	1.288490e-59
MsG0280006747.01	MsG0580025073.01	0.859218	4.815571e-63	1.262249e-59
MsG0280006747.01	MsG0580025750.01	0.901436	2.685300e-78	3.627936e-74
MsG0280006747.01	MsG0580026029.01	0.801278	9.710241e-49	4.618640e-46
MsG0280006747.01	MsG0580026446.01	0.802439	5.607258e-49	2.746812e-46
MsG0280006747.01	MsG0580029702.01	0.802871	4.566951e-49	2.261950e-46
MsG0280006747.01	MsG0580030073.01	0.872681	2.637345e-67	1.113662e-63
MsG0280006747.01	MsG0680031368.01	0.868304	7.214562e-66	2.596871e-62
MsG0280006747.01	MsG0680032459.01	0.841334	5.062114e-58	7.413314e-55
MsG0280006747.01	MsG0680035611.01	0.893886	4.139216e-75	4.020564e-71
MsG0280006747.01	MsG0680035905.01	0.804447	2.151050e-49	1.109328e-46
MsG0280006747.01	MsG0780036015.01	0.815826	7.577008e-52	5.279644e-49
MsG0280006747.01	MsG0780036859.01	0.845880	3.080944e-59	5.208787e-56
MsG0280006747.01	MsG0780037290.01	0.809484	1.849205e-50	1.087028e-47
MsG0280006747.01	MsG0780038383.01	0.862899	3.653468e-64	1.087328e-60
MsG0280006747.01	MsG0780039937.01	0.866631	2.475629e-65	8.401560e-62
MsG0280006747.01	MsG0780040978.01	0.800503	1.397734e-48	6.518883e-46
MsG0280006747.01	MsG0780041058.01	0.812396	4.329314e-51	2.749737e-48
MsG0280006747.01	MsG0780041076.01	0.833640	4.749587e-56	5.502499e-53
MsG0280006747.01	MsG0780041240.01	0.874287	7.596904e-68	3.400437e-64
MsG0280006747.01	MsG0780041244.01	0.847717	9.694211e-60	1.738500e-56
MsG0280006747.01	MsG0780041311.01	0.875724	2.458150e-68	1.160225e-64
MsG0280006747.01	MsG0780041522.01	0.897531	1.285261e-76	1.458155e-72
MsG0280006747.01	MsG0780041790.01	0.867875	9.908343e-66	3.512852e-62
MsG0280006747.01	MsG0880041941.01	0.862576	4.597000e-64	1.352652e-60
MsG0280006747.01	MsG0880042209.01	0.821094	4.846374e-53	3.905453e-50
MsG0280006747.01	MsG0880042517.01	0.912938	1.097249e-83	2.531013e-79
MsG0280006747.01	MsG0880042896.01	0.823336	1.463271e-53	1.256236e-50
MsG0280006747.01	MsG0880043076.01	0.931952	1.762526e-94	1.149696e-89
MsG0280006747.01	MsG0880044204.01	0.850666	1.464721e-60	2.890577e-57
MsG0280006747.01	MsG0880045836.01	0.873747	1.156769e-67	5.076255e-64
MsG0280006747.01	MsG0880046220.01	0.899136	2.670074e-77	3.257172e-73
MsG0280006747.01	MsG0880046486.01	0.895078	1.347740e-75	1.377190e-71
MsG0280006747.01	MsG0880046760.01	0.829962	3.837837e-55	3.988222e-52
MsG0280006747.01	MsG0880047090.01	0.814403	1.568601e-51	1.051546e-48
MsG0280006747.01	MsG0880047146.01	0.856651	2.785164e-62	6.694235e-59
MsG0280006747.01	MsG0880047310.01	0.839038	2.012559e-57	2.745247e-54

PPI

Gene1	Gene2	Type
MsG0280009166.01	MsG0280006747.01	PPI
MsG0880046760.01	MsG0280006747.01	PPI
MsG0380015857.01	MsG0280006747.01	PPI

Query id	Subject id	identity %	alignment length	mismatches	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280006747.01.T01	MTR_3g078653	100.000	204	0	1	204	1	204	8.93e-150	414
MsG0280006747.01.T01	MTR_2g014220	99.510	204	1	1	204	49	252	2.48e-149	415
MsG0280006747.01.T01	MTR_7g026915	94.915	59	3	1	59	1	59	3.94e-33	125
MsG0280006747.01.T01	MTR_7g026915	87.500	64	8	1	64	1	64	1.57e-31	120

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280006747.01.T01	AT4G16720	88.235	204	24	0	1	204	1	204	8.99e-122	343
MsG0280006747.01.T01	AT4G17390	87.745	204	25	0	1	204	1	204	1.87e-121	342

Find 86 sgRNAs with CRISPR-Local

Find 100 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CGTGAGACAAACCGAGAAAA+TGG	0.255682	2:+5780625	None:intergenic
GGAGGAAGCTTGGTGGCCTT+AGG	0.282780	2:+5781283	MsG0280006747.01.T01:CDS
GTTTCCAAGGGTATTGTATA+CGG	0.297546	2:+5781186	MsG0280006747.01.T01:CDS
CAAGTATTTCGAGGTCATTT+TGG	0.317500	2:+5781344	MsG0280006747.01.T01:CDS
TTGGTAAGCCAGTTGATTCT+TGG	0.325346	2:-5781399	None:intergenic
TCCTGACAAAGCTCGCCGTT+TGG	0.353079	2:+5780872	MsG0280006747.01.T01:CDS
ACAAGTATGTTTCTGAGTTA+TGG	0.369598	2:+5780751	MsG0280006747.01.T01:CDS
TTAGGGTTCTCAATTCCTAC+TGG	0.369741	2:+5781301	MsG0280006747.01.T01:CDS
CCTGACAAAGCTCGCCGTTT+GGG	0.382164	2:+5780873	MsG0280006747.01.T01:CDS
GTCCTTCCCGCAGGGCAAAC+TGG	0.382984	2:+5781517	MsG0280006747.01.T01:CDS
GAGGAAGCTTGGTGGCCTTA+GGG	0.392690	2:+5781284	MsG0280006747.01.T01:CDS
TGCGGGAAGGACGGGCTTTG+TGG	0.410020	2:-5781506	None:intergenic
TCTCTTCCAGTTTGCCCTGC+GGG	0.416755	2:-5781523	None:intergenic
AGCTCGCCGTTTGGGTTACA+AGG	0.427870	2:+5780881	MsG0280006747.01.T01:CDS
TCTGTTGCCGAGGAGCGTGC+TGG	0.428375	2:+5781261	MsG0280006747.01.T01:CDS
CCCAAACGGCGAGCTTTGTC+AGG	0.428600	2:-5780873	None:intergenic
AGTGCATTATATCTAGACTT+TGG	0.433133	2:+5781622	MsG0280006747.01.T01:three_prime_UTR
GTTTGCCCTGCGGGAAGGAC+GGG	0.445042	2:-5781514	None:intergenic
TTTGTCAGGACGAGTGGGTC+TGG	0.461552	2:-5780859	None:intergenic
AATGACCTCGAAATACTTGA+AGG	0.462538	2:-5781340	None:intergenic
AGTTTGCCCTGCGGGAAGGA+CGG	0.463498	2:-5781515	None:intergenic
TATACAATACCCTTGGAAAC+CGG	0.467374	2:-5781183	None:intergenic
CTGTTGCCGAGGAGCGTGCT+GGG	0.471029	2:+5781262	MsG0280006747.01.T01:CDS
GAGCGTGCTGGGAGGAAGCT+TGG	0.477629	2:+5781273	MsG0280006747.01.T01:CDS
TTCTACCTTCAAGTATTTCG+AGG	0.487663	2:+5781335	MsG0280006747.01.T01:CDS
CCAATCCTGTCCACAAGCAT+AGG	0.488032	2:+5781418	MsG0280006747.01.T01:CDS
TTACTCAACTTAAGTTTCAA+AGG	0.490055	2:+5781229	MsG0280006747.01.T01:CDS
TACGTAGAGGTGGGAGAAAG+AGG	0.490900	2:+5781160	MsG0280006747.01.T01:CDS
CTTCGTGGTCTCACTTCTGC+TGG	0.495517	2:+5781444	MsG0280006747.01.T01:CDS
TTGAGTAACTCCCTGGTTAG+TGG	0.499501	2:-5781214	None:intergenic
TCATGCAGCGTGTGAGGTGT+TGG	0.501162	2:+5780802	MsG0280006747.01.T01:CDS
ACAAAGCCCGTCCTTCCCGC+AGG	0.505243	2:+5781508	MsG0280006747.01.T01:CDS
CATGCAGCGTGTGAGGTGTT+GGG	0.510206	2:+5780803	MsG0280006747.01.T01:CDS
GAGAAAGAGGCCGGTTTCCA+AGG	0.516642	2:+5781173	MsG0280006747.01.T01:CDS
TGAGTAACTCCCTGGTTAGT+GGG	0.518159	2:-5781213	None:intergenic
GTGAGACAAACCGAGAAAAT+GGG	0.520353	2:+5780626	None:intergenic
CCTATGCTTGTGGACAGGAT+TGG	0.520921	2:-5781418	None:intergenic
TTCCAGTTTGCCCTGCGGGA+AGG	0.525009	2:-5781519	None:intergenic
CACGAAGTTCCCTATGCTTG+TGG	0.529755	2:-5781428	None:intergenic
GAAATGATCCAAGAATCAAC+TGG	0.530060	2:+5781391	MsG0280006747.01.T01:CDS
TTTCCAAGGGTATTGTATAC+GGG	0.532253	2:+5781187	MsG0280006747.01.T01:CDS
TTTGGGTTACAAGGCCAAGC+AGG	0.540516	2:+5780890	MsG0280006747.01.T01:CDS
AGTTCCCTATGCTTGTGGAC+AGG	0.542094	2:-5781423	None:intergenic
CGTGCTGGGAGGAAGCTTGG+TGG	0.543008	2:+5781276	MsG0280006747.01.T01:CDS
ATACGGGAAGCCCACTAACC+AGG	0.546286	2:+5781203	MsG0280006747.01.T01:CDS
GCGAGCTTTGTCAGGACGAG+TGG	0.547527	2:-5780865	None:intergenic
TAGGGTTCTCAATTCCTACT+GGG	0.548434	2:+5781302	MsG0280006747.01.T01:CDS
AACAGAGGTTTGAGTGGCAA+GGG	0.550062	2:+5781474	MsG0280006747.01.T01:CDS
CTTCCTCCCAGCACGCTCCT+CGG	0.550992	2:-5781268	None:intergenic
CACCTCTACGTACCCTCACT+CGG	0.553002	2:-5781149	None:intergenic
AAGAATAGATGATACCTGCT+TGG	0.559188	2:-5780904	None:intergenic
CAATCCTGTCCACAAGCATA+GGG	0.561253	2:+5781419	MsG0280006747.01.T01:CDS
ACTTAAGTTGAGTAACTCCC+TGG	0.562594	2:-5781221	None:intergenic
CTTCCCGTATACAATACCCT+TGG	0.574843	2:-5781190	None:intergenic
TTCTAGGCAAAGACACAGAT+CGG	0.576700	2:-5781673	None:intergenic
CAATTCCTACTGGGTCAATG+AGG	0.583661	2:+5781311	MsG0280006747.01.T01:CDS
ATTGACACGGTATCATCCAC+TGG	0.584248	2:+5781822	MsG0280006747.01.T01:three_prime_UTR
AGAAAGAGGCCGGTTTCCAA+GGG	0.585417	2:+5781174	MsG0280006747.01.T01:CDS
AAACAGAGGTTTGAGTGGCA+AGG	0.585660	2:+5781473	MsG0280006747.01.T01:CDS
TTCTCTTCCAGTTTGCCCTG+CGG	0.587901	2:-5781524	None:intergenic
CGAGTGAGGGTACGTAGAGG+TGG	0.590318	2:+5781150	MsG0280006747.01.T01:CDS
CTTTGTTGTTTGGATTGACA+CGG	0.593413	2:+5781809	MsG0280006747.01.T01:three_prime_UTR
GCTTGGCCTTGTAACCCAAA+CGG	0.594502	2:-5780887	None:intergenic
TAGAGGTGGGAGAAAGAGGC+CGG	0.597426	2:+5781164	MsG0280006747.01.T01:CDS
CACAAGCATAGGGAACTTCG+TGG	0.602517	2:+5781429	MsG0280006747.01.T01:CDS
CAAAGCCCGTCCTTCCCGCA+GGG	0.606273	2:+5781509	MsG0280006747.01.T01:CDS
GAGTAAGAGATCTGTTGCCG+AGG	0.608981	2:+5781251	MsG0280006747.01.T01:CDS
TACGGGAAGCCCACTAACCA+GGG	0.619308	2:+5781204	MsG0280006747.01.T01:CDS
GTTATGTTGTGTACCGAGTG+AGG	0.619671	2:+5781136	MsG0280006747.01.T01:CDS
AGAATCCTCATTGACCCAGT+AGG	0.619890	2:-5781316	None:intergenic
CGAGCTTTGTCAGGACGAGT+GGG	0.623786	2:-5780864	None:intergenic
GGGTCTGGTGAGACGAACAA+TGG	0.629081	2:-5780844	None:intergenic
GACGGGCTTTGTGGTAACGA+TGG	0.630329	2:-5781497	None:intergenic
ACGATAACGACGGAGAGACA+AGG	0.632844	2:-5781553	None:intergenic
AAGAACAAATGATCAAACAA+AGG	0.636942	2:-5781738	None:intergenic
TGAGATTCATGCAGCGTGTG+AGG	0.638236	2:+5780796	MsG0280006747.01.T01:CDS
AAAGAAAACAGAGGTTTGAG+TGG	0.638472	2:+5781468	MsG0280006747.01.T01:CDS
AGTATGTTTCTGAGTTATGG+CGG	0.642445	2:+5780754	MsG0280006747.01.T01:CDS
AGTAGGAATTGAGAACCCTA+AGG	0.644888	2:-5781299	None:intergenic
TTATGTTGTGTACCGAGTGA+GGG	0.645103	2:+5781137	MsG0280006747.01.T01:CDS
TTGCCGAGGAGCGTGCTGGG+AGG	0.662735	2:+5781265	MsG0280006747.01.T01:CDS
GTTATGGCGGAAGAAGCAAT+CGG	0.676275	2:+5780767	MsG0280006747.01.T01:CDS
TCTGCTGGTAAAGAAAACAG+AGG	0.678817	2:+5781459	MsG0280006747.01.T01:CDS
GAGTGAGGGTACGTAGAGGT+GGG	0.682033	2:+5781151	MsG0280006747.01.T01:CDS
AGTAAAATCAACGATAACGA+CGG	0.699472	2:-5781563	None:intergenic
TACCGAGTGAGGGTACGTAG+AGG	0.717794	2:+5781147	MsG0280006747.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAACAAGCTTATTATTGATA+AGG	-	Chr2:5780947-5780966	None:intergenic	20.0%
!!	CATCAATATAAGTTCTATTA+AGG	-	Chr2:5781068-5781087	None:intergenic	20.0%
!!!	ATTTGAACTTCATTGATTTT+AGG	+	Chr2:5781113-5781132	MsG0280006747.01.T01:intron	20.0%
!!!	GTTATTTGTGAATTTTGAAT+AGG	+	Chr2:5780723-5780742	MsG0280006747.01.T01:intron	20.0%
!!!	TTTGAACTTCATTGATTTTA+GGG	+	Chr2:5781114-5781133	MsG0280006747.01.T01:intron	20.0%
!	AACAACAAAAATGAGTTTCT+AGG	-	Chr2:5781692-5781711	None:intergenic	25.0%
!	AAGAACAAATGATCAAACAA+AGG	-	Chr2:5781741-5781760	None:intergenic	25.0%
!	AGAAAGAATTAAAGCATGTT+TGG	-	Chr2:5780998-5781017	None:intergenic	25.0%
!	TTACTCAACTTAAGTTTCAA+AGG	+	Chr2:5781229-5781248	MsG0280006747.01.T01:CDS	25.0%
	AGTAAAATCAACGATAACGA+CGG	-	Chr2:5781566-5781585	None:intergenic	30.0%
	AGTGCATTATATCTAGACTT+TGG	+	Chr2:5781622-5781641	MsG0280006747.01.T01:three_prime_UTR	30.0%
	GAATTAAAGCATGTTTGGAT+TGG	-	Chr2:5780993-5781012	None:intergenic	30.0%
!	ACAAGTATGTTTCTGAGTTA+TGG	+	Chr2:5780751-5780770	MsG0280006747.01.T01:CDS	30.0%
!!!	CTATGTTTTGCTTTGTTGTT+TGG	+	Chr2:5781799-5781818	MsG0280006747.01.T01:three_prime_UTR	30.0%
	AAAGAAAACAGAGGTTTGAG+TGG	+	Chr2:5781468-5781487	MsG0280006747.01.T01:CDS	35.0%
	AAGAATAGATGATACCTGCT+TGG	-	Chr2:5780907-5780926	None:intergenic	35.0%
	AATGACCTCGAAATACTTGA+AGG	-	Chr2:5781343-5781362	None:intergenic	35.0%
	GAAATGATCCAAGAATCAAC+TGG	+	Chr2:5781391-5781410	MsG0280006747.01.T01:CDS	35.0%
	TATACAATACCCTTGGAAAC+CGG	-	Chr2:5781186-5781205	None:intergenic	35.0%
	TTCTACCTTCAAGTATTTCG+AGG	+	Chr2:5781335-5781354	MsG0280006747.01.T01:CDS	35.0%
!	AGTATGTTTCTGAGTTATGG+CGG	+	Chr2:5780754-5780773	MsG0280006747.01.T01:CDS	35.0%
!	CAAGTATTTCGAGGTCATTT+TGG	+	Chr2:5781344-5781363	MsG0280006747.01.T01:CDS	35.0%
!!	CTGTTTCTATTCATTCTCTC+TGG	+	Chr2:5780672-5780691	MsG0280006747.01.T01:intron	35.0%
!!	CTTTGTTGTTTGGATTGACA+CGG	+	Chr2:5781809-5781828	MsG0280006747.01.T01:three_prime_UTR	35.0%
!!	GTTTCCAAGGGTATTGTATA+CGG	+	Chr2:5781186-5781205	MsG0280006747.01.T01:CDS	35.0%
!!	TTTCCAAGGGTATTGTATAC+GGG	+	Chr2:5781187-5781206	MsG0280006747.01.T01:CDS	35.0%
	AGTAGGAATTGAGAACCCTA+AGG	-	Chr2:5781302-5781321	None:intergenic	40.0%
	TAGGGTTCTCAATTCCTACT+GGG	+	Chr2:5781302-5781321	MsG0280006747.01.T01:CDS	40.0%
	TCTGCTGGTAAAGAAAACAG+AGG	+	Chr2:5781459-5781478	MsG0280006747.01.T01:CDS	40.0%
	TTAGGGTTCTCAATTCCTAC+TGG	+	Chr2:5781301-5781320	MsG0280006747.01.T01:CDS	40.0%
	TTATGTTGTGTACCGAGTGA+GGG	+	Chr2:5781137-5781156	MsG0280006747.01.T01:CDS	40.0%
	TTCTAGGCAAAGACACAGAT+CGG	-	Chr2:5781676-5781695	None:intergenic	40.0%
!	CACTGGTACTGCAAGTTTTT+GGG	+	Chr2:5781839-5781858	MsG0280006747.01.T01:three_prime_UTR	40.0%
!	TGGATGCATACCCATTTTCT+CGG	-	Chr2:5780639-5780658	None:intergenic	40.0%
!	TTGGTAAGCCAGTTGATTCT+TGG	-	Chr2:5781402-5781421	None:intergenic	40.0%
!	TTTTGCGTTGCTTCGTTTTC+TGG	+	Chr2:5781593-5781612	MsG0280006747.01.T01:three_prime_UTR	40.0%
!!	ACTTAAGTTGAGTAACTCCC+TGG	-	Chr2:5781224-5781243	None:intergenic	40.0%
	AAACAGAGGTTTGAGTGGCA+AGG	+	Chr2:5781473-5781492	MsG0280006747.01.T01:CDS	45.0%
	AACAGAGGTTTGAGTGGCAA+GGG	+	Chr2:5781474-5781493	MsG0280006747.01.T01:CDS	45.0%
	AGAATCCTCATTGACCCAGT+AGG	-	Chr2:5781319-5781338	None:intergenic	45.0%
	ATTGACACGGTATCATCCAC+TGG	+	Chr2:5781822-5781841	MsG0280006747.01.T01:three_prime_UTR	45.0%
	CAATCCTGTCCACAAGCATA+GGG	+	Chr2:5781419-5781438	MsG0280006747.01.T01:CDS	45.0%
	CAATTCCTACTGGGTCAATG+AGG	+	Chr2:5781311-5781330	MsG0280006747.01.T01:CDS	45.0%
	CCAAAAACTTGCAGTACCAG+TGG	-	Chr2:5781841-5781860	None:intergenic	45.0%
	CTTCCCGTATACAATACCCT+TGG	-	Chr2:5781193-5781212	None:intergenic	45.0%
	GAAACAGCAGCTGCAATAGA+TGG	-	Chr2:5780659-5780678	None:intergenic	45.0%
	GTTATGTTGTGTACCGAGTG+AGG	+	Chr2:5781136-5781155	MsG0280006747.01.T01:CDS	45.0%
	TGAGTAACTCCCTGGTTAGT+GGG	-	Chr2:5781216-5781235	None:intergenic	45.0%
	TTGAGTAACTCCCTGGTTAG+TGG	-	Chr2:5781217-5781236	None:intergenic	45.0%
!	CCACTGGTACTGCAAGTTTT+TGG	+	Chr2:5781838-5781857	MsG0280006747.01.T01:three_prime_UTR	45.0%
!	GTTATGGCGGAAGAAGCAAT+CGG	+	Chr2:5780767-5780786	MsG0280006747.01.T01:CDS	45.0%
	ACGATAACGACGGAGAGACA+AGG	-	Chr2:5781556-5781575	None:intergenic	50.0%
	AGTTCCCTATGCTTGTGGAC+AGG	-	Chr2:5781426-5781445	None:intergenic	50.0%
	CACAAGCATAGGGAACTTCG+TGG	+	Chr2:5781429-5781448	MsG0280006747.01.T01:CDS	50.0%
	CACGAAGTTCCCTATGCTTG+TGG	-	Chr2:5781431-5781450	None:intergenic	50.0%
	CCAATCCTGTCCACAAGCAT+AGG	+	Chr2:5781418-5781437	MsG0280006747.01.T01:CDS	50.0%
	CCTATGCTTGTGGACAGGAT+TGG	-	Chr2:5781421-5781440	None:intergenic	50.0%
	GAGTAAGAGATCTGTTGCCG+AGG	+	Chr2:5781251-5781270	MsG0280006747.01.T01:CDS	50.0%
	TACGTAGAGGTGGGAGAAAG+AGG	+	Chr2:5781160-5781179	MsG0280006747.01.T01:CDS	50.0%
	TGAGATTCATGCAGCGTGTG+AGG	+	Chr2:5780796-5780815	MsG0280006747.01.T01:CDS	50.0%
	TTCTCTTCCAGTTTGCCCTG+CGG	-	Chr2:5781527-5781546	None:intergenic	50.0%
!	AGAAAGAGGCCGGTTTCCAA+GGG	+	Chr2:5781174-5781193	MsG0280006747.01.T01:CDS	50.0%
!	TTTGGGTTACAAGGCCAAGC+AGG	+	Chr2:5780890-5780909	MsG0280006747.01.T01:CDS	50.0%
!!	GCTTGGCCTTGTAACCCAAA+CGG	-	Chr2:5780890-5780909	None:intergenic	50.0%
	ATACGGGAAGCCCACTAACC+AGG	+	Chr2:5781203-5781222	MsG0280006747.01.T01:CDS	55.0%
	CACCTCTACGTACCCTCACT+CGG	-	Chr2:5781152-5781171	None:intergenic	55.0%
	CCTGACAAAGCTCGCCGTTT+GGG	+	Chr2:5780873-5780892	MsG0280006747.01.T01:CDS	55.0%
	CTTCGTGGTCTCACTTCTGC+TGG	+	Chr2:5781444-5781463	MsG0280006747.01.T01:CDS	55.0%
	GGGTCTGGTGAGACGAACAA+TGG	-	Chr2:5780847-5780866	None:intergenic	55.0%
	TACGGGAAGCCCACTAACCA+GGG	+	Chr2:5781204-5781223	MsG0280006747.01.T01:CDS	55.0%
	TAGAGGTGGGAGAAAGAGGC+CGG	+	Chr2:5781164-5781183	MsG0280006747.01.T01:CDS	55.0%
	TCATGCAGCGTGTGAGGTGT+TGG	+	Chr2:5780802-5780821	MsG0280006747.01.T01:CDS	55.0%
	TCCTGACAAAGCTCGCCGTT+TGG	+	Chr2:5780872-5780891	MsG0280006747.01.T01:CDS	55.0%
	TCTCTTCCAGTTTGCCCTGC+GGG	-	Chr2:5781526-5781545	None:intergenic	55.0%
	TTTGTCAGGACGAGTGGGTC+TGG	-	Chr2:5780862-5780881	None:intergenic	55.0%
!	AGCTCGCCGTTTGGGTTACA+AGG	+	Chr2:5780881-5780900	MsG0280006747.01.T01:CDS	55.0%
!	CATGCAGCGTGTGAGGTGTT+GGG	+	Chr2:5780803-5780822	MsG0280006747.01.T01:CDS	55.0%
!	CGAGCTTTGTCAGGACGAGT+GGG	-	Chr2:5780867-5780886	None:intergenic	55.0%
!	GACGGGCTTTGTGGTAACGA+TGG	-	Chr2:5781500-5781519	None:intergenic	55.0%
!	GAGAAAGAGGCCGGTTTCCA+AGG	+	Chr2:5781173-5781192	MsG0280006747.01.T01:CDS	55.0%
!	GAGGAAGCTTGGTGGCCTTA+GGG	+	Chr2:5781284-5781303	MsG0280006747.01.T01:CDS	55.0%
!	GAGTGAGGGTACGTAGAGGT+GGG	+	Chr2:5781151-5781170	MsG0280006747.01.T01:CDS	55.0%
!	TACCGAGTGAGGGTACGTAG+AGG	+	Chr2:5781147-5781166	MsG0280006747.01.T01:CDS	55.0%
	AGTTTGCCCTGCGGGAAGGA+CGG	-	Chr2:5781518-5781537	None:intergenic	60.0%
	TTCCAGTTTGCCCTGCGGGA+AGG	-	Chr2:5781522-5781541	None:intergenic	60.0%
!	CCCAAACGGCGAGCTTTGTC+AGG	-	Chr2:5780876-5780895	None:intergenic	60.0%
!	CGAGTGAGGGTACGTAGAGG+TGG	+	Chr2:5781150-5781169	MsG0280006747.01.T01:CDS	60.0%
!	GCGAGCTTTGTCAGGACGAG+TGG	-	Chr2:5780868-5780887	None:intergenic	60.0%
!	GGAGGAAGCTTGGTGGCCTT+AGG	+	Chr2:5781283-5781302	MsG0280006747.01.T01:CDS	60.0%
	ACAAAGCCCGTCCTTCCCGC+AGG	+	Chr2:5781508-5781527	MsG0280006747.01.T01:CDS	65.0%
	CAAAGCCCGTCCTTCCCGCA+GGG	+	Chr2:5781509-5781528	MsG0280006747.01.T01:CDS	65.0%
	CGTGCTGGGAGGAAGCTTGG+TGG	+	Chr2:5781276-5781295	MsG0280006747.01.T01:CDS	65.0%
	CTTCCTCCCAGCACGCTCCT+CGG	-	Chr2:5781271-5781290	None:intergenic	65.0%
	GAGCGTGCTGGGAGGAAGCT+TGG	+	Chr2:5781273-5781292	MsG0280006747.01.T01:CDS	65.0%
	GTCCTTCCCGCAGGGCAAAC+TGG	+	Chr2:5781517-5781536	MsG0280006747.01.T01:CDS	65.0%
	GTTTGCCCTGCGGGAAGGAC+GGG	-	Chr2:5781517-5781536	None:intergenic	65.0%
!	CTGTTGCCGAGGAGCGTGCT+GGG	+	Chr2:5781262-5781281	MsG0280006747.01.T01:CDS	65.0%
!	TCTGTTGCCGAGGAGCGTGC+TGG	+	Chr2:5781261-5781280	MsG0280006747.01.T01:CDS	65.0%
!	TGCGGGAAGGACGGGCTTTG+TGG	-	Chr2:5781509-5781528	None:intergenic	65.0%
!	TTGCCGAGGAGCGTGCTGGG+AGG	+	Chr2:5781265-5781284	MsG0280006747.01.T01:CDS	70.0%

Chromosome	Type	Strat	End	Strand	Name
Chr2	gene	5780629	5781864	5780629	ID=MsG0280006747.01;Name=MsG0280006747.01
Chr2	mRNA	5780629	5781864	5780629	ID=MsG0280006747.01.T01;Parent=MsG0280006747.01;Name=MsG0280006747.01.T01;_AED=0.18;_eAED=0.18;_QI=15\|1\|1\|1\|1\|1\|3\|286\|204
Chr2	exon	5780629	5780647	5780629	ID=MsG0280006747.01.T01:exon:2331;Parent=MsG0280006747.01.T01
Chr2	exon	5780745	5780911	5780745	ID=MsG0280006747.01.T01:exon:2332;Parent=MsG0280006747.01.T01
Chr2	exon	5781135	5781864	5781135	ID=MsG0280006747.01.T01:exon:2333;Parent=MsG0280006747.01.T01
Chr2	five_prime_UTR	5780629	5780643	5780629	ID=MsG0280006747.01.T01:five_prime_utr;Parent=MsG0280006747.01.T01
Chr2	CDS	5780644	5780647	5780644	ID=MsG0280006747.01.T01:cds;Parent=MsG0280006747.01.T01
Chr2	CDS	5780745	5780911	5780745	ID=MsG0280006747.01.T01:cds;Parent=MsG0280006747.01.T01
Chr2	CDS	5781135	5781578	5781135	ID=MsG0280006747.01.T01:cds;Parent=MsG0280006747.01.T01
Chr2	three_prime_UTR	5781579	5781864	5781579	ID=MsG0280006747.01.T01:three_prime_utr;Parent=MsG0280006747.01.T01

Gene Sequence

>MsG0280006747.01.T01

ATGGGTGCATACAAGTATGTTTCTGAGTTATGGCGGAAGAAGCAATCGGATGTGATGAGATTCATGCAGCGTGTGAGGTGTTGGGAGTATCGTCAACAATCTTCCATTGTTCGTCTCACCAGACCCACTCGTCCTGACAAAGCTCGCCGTTTGGGTTACAAGGCCAAGCAGGGTTATGTTGTGTACCGAGTGAGGGTACGTAGAGGTGGGAGAAAGAGGCCGGTTTCCAAGGGTATTGTATACGGGAAGCCCACTAACCAGGGAGTTACTCAACTTAAGTTTCAAAGGAGTAAGAGATCTGTTGCCGAGGAGCGTGCTGGGAGGAAGCTTGGTGGCCTTAGGGTTCTCAATTCCTACTGGGTCAATGAGGATTCTACCTTCAAGTATTTCGAGGTCATTTTGGTTGATGTTGCTCATAGTGCTATAAGAAATGATCCAAGAATCAACTGGCTTACCAATCCTGTCCACAAGCATAGGGAACTTCGTGGTCTCACTTCTGCTGGTAAAGAAAACAGAGGTTTGAGTGGCAAGGGCCATCGTTACCACAAAGCCCGTCCTTCCCGCAGGGCAAACTGGAAGAGAAACAACACCTTGTCTCTCCGTCGTTATCGTTGA

Protein sequence

>MsG0280006747.01.T01

MGAYKYVSELWRKKQSDVMRFMQRVRCWEYRQQSSIVRLTRPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVSKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWVNEDSTFKYFEVILVDVAHSAIRNDPRINWLTNPVHKHRELRGLTSAGKENRGLSGKGHRYHKARPSRRANWKRNNTLSLRRYR*