AlfalfaGEDB | MsG0280010232.01

M. sativa cultivar ZhongmuNo.1 / MsG0280010232.01

KEGG: K02997
GO: GO:0003723 GO:0003735 GO:0005622 GO:0006412 GO:0015935 GO:0019843
PFAM: PF00163 PF01479

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280010232.01.T01	XP_003598026.1	97.462	197	5	0	1	197	1	197	7.23E-139	395

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280010232.01.T01	Q9FLF0	89.305	187	20	0	1	187	1	187	1.68E-121	344

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280010232.01.T01	B7FMD4	97.462	197	5	0	1	197	1	197	3.45e-139	395

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0180000118.01	MsG0280010232.01	0.847417	1.172026e-59	2.081718e-56
MsG0180001169.01	MsG0280010232.01	0.826414	2.748597e-54	2.576023e-51
MsG0180001829.01	MsG0280010232.01	0.838108	3.497325e-57	4.637168e-54
MsG0180002738.01	MsG0280010232.01	0.845762	3.317680e-59	5.587804e-56
MsG0180003585.01	MsG0280010232.01	0.836590	8.557330e-57	1.083287e-53
MsG0180003623.01	MsG0280010232.01	0.842472	2.532444e-58	3.844183e-55
MsG0180003897.01	MsG0280010232.01	0.893309	7.087887e-75	6.716485e-71
MsG0180004503.01	MsG0280010232.01	0.911053	9.388431e-83	1.976072e-78
MsG0180004829.01	MsG0280010232.01	0.854859	9.296007e-62	2.105353e-58
MsG0180005573.01	MsG0280010232.01	0.808274	3.356589e-50	1.911083e-47
MsG0280006301.01	MsG0280010232.01	0.820723	5.900776e-53	4.705809e-50
MsG0280006629.01	MsG0280010232.01	0.849490	3.127731e-60	5.939168e-57
MsG0280006747.01	MsG0280010232.01	0.885183	1.012828e-71	6.883209e-68
MsG0280007055.01	MsG0280010232.01	0.835684	1.454017e-56	1.791313e-53
MsG0280010203.01	MsG0280010232.01	0.867425	1.382187e-65	4.823461e-62
MsG0280010232.01	MsG0380015766.01	0.858259	9.311343e-63	2.362218e-59
MsG0280010232.01	MsG0380015857.01	0.828661	7.941583e-55	7.944919e-52
MsG0280010232.01	MsG0380016653.01	0.810789	9.677901e-51	5.888774e-48
MsG0280010232.01	MsG0380016678.01	0.833201	6.108880e-56	6.985617e-53
MsG0280010232.01	MsG0380016732.01	0.833938	3.999745e-56	4.676315e-53
MsG0280010232.01	MsG0380016744.01	0.890552	8.887427e-74	7.509405e-70
MsG0280010232.01	MsG0380016805.01	0.887163	1.816595e-72	1.335841e-68
MsG0280010232.01	MsG0380017119.01	0.807733	4.376761e-50	2.456573e-47
MsG0280010232.01	MsG0480018164.01	0.800925	1.146412e-48	5.404562e-46
MsG0280010232.01	MsG0480020796.01	0.867346	1.464028e-65	5.095072e-62
MsG0280010232.01	MsG0480021279.01	0.826282	2.955321e-54	2.759272e-51
MsG0280010232.01	MsG0480021417.01	0.877040	8.638549e-69	4.281066e-65
MsG0280010232.01	MsG0480021879.01	0.840740	7.246207e-58	1.041901e-54
MsG0280010232.01	MsG0480022006.01	0.816949	4.247191e-52	3.052168e-49
MsG0280010232.01	MsG0480022955.01	0.898650	4.308675e-77	5.139501e-73
MsG0280010232.01	MsG0480023380.01	0.842424	2.607545e-58	3.952351e-55
MsG0280010232.01	MsG0480023774.01	0.820729	5.881143e-53	4.690967e-50
MsG0280010232.01	MsG0480023931.01	0.842322	2.775672e-58	4.193341e-55
MsG0280010232.01	MsG0480023996.01	0.887898	9.515950e-73	7.209795e-69
MsG0280010232.01	MsG0580024738.01	0.885782	6.039786e-72	4.201986e-68
MsG0280010232.01	MsG0580024894.01	0.842137	3.106667e-58	4.665893e-55
MsG0280010232.01	MsG0580025073.01	0.809374	1.953309e-50	1.144910e-47
MsG0280010232.01	MsG0580025750.01	0.826233	3.035524e-54	2.830259e-51
MsG0280010232.01	MsG0580029168.01	0.824579	7.477477e-54	6.650724e-51
MsG0280010232.01	MsG0580029284.01	0.800271	1.558925e-48	7.228064e-46
MsG0280010232.01	MsG0580029754.01	0.822165	2.741390e-53	2.276642e-50
MsG0280010232.01	MsG0580030073.01	0.826665	2.394560e-54	2.260280e-51
MsG0280010232.01	MsG0680031368.01	0.836216	1.065385e-56	1.333959e-53
MsG0280010232.01	MsG0680032459.01	0.858155	1.000272e-62	2.528697e-59
MsG0280010232.01	MsG0780036859.01	0.809061	2.278875e-50	1.324589e-47
MsG0280010232.01	MsG0780041240.01	0.810110	1.356297e-50	8.105901e-48
MsG0280010232.01	MsG0780041244.01	0.835976	1.226260e-56	1.523945e-53
MsG0280010232.01	MsG0780041311.01	0.897505	1.317062e-76	1.492591e-72
MsG0280010232.01	MsG0880041941.01	0.820847	5.523834e-53	4.420796e-50
MsG0280010232.01	MsG0880042517.01	0.884549	1.743528e-71	1.155205e-67
MsG0280010232.01	MsG0880043076.01	0.875758	2.392980e-68	1.130878e-64
MsG0280010232.01	MsG0880044204.01	0.859171	4.974249e-63	1.301679e-59
MsG0280010232.01	MsG0880046220.01	0.827167	1.816509e-54	1.739887e-51

PPI

Gene1	Gene2	Type
MsG0280010232.01	MsG0480023805.01	PPI
MsG0280010232.01	MsG0480020375.01	PPI

Query id	Subject id	identity %	alignment length	mismatches	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280010232.01.T01	MTR_4g021290	97.462	197	5	1	197	1	197	8.75e-143	395
MsG0280010232.01.T01	MTR_3g005450	97.462	197	5	1	197	1	197	8.75e-143	395
MsG0280010232.01.T01	MTR_3g005430	97.462	197	5	1	197	1	197	8.75e-143	395
MsG0280010232.01.T01	MTR_7g067490	96.257	187	7	1	187	1	187	1.25e-126	355
MsG0280010232.01.T01	MTR_1g068965	95.531	179	8	1	179	28	206	3.40e-125	352
MsG0280010232.01.T01	MTR_4g108310	93.913	115	7	1	115	1	115	6.32e-76	224
MsG0280010232.01.T01	MTR_4g108305	100.000	38	0	138	175	21	58	3.15e-22	85.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280010232.01.T01	AT5G39850	89.305	187	20	0	1	187	1	187	1.71e-122	344
MsG0280010232.01.T01	AT5G15200	83.333	198	32	1	1	197	1	198	6.48e-116	328
MsG0280010232.01.T01	AT5G15200	87.591	137	17	0	1	137	1	137	1.48e-84	247

Find 74 sgRNAs with CRISPR-Local

Find 101 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTCCCATAGTTTCGGTAAAA+TGG	0.192500	2:-66441314	None:intergenic
CCCTTTGGTGGTGGTCTTCC+TGG	0.209962	2:+66441985	MsG0280010232.01.T01:CDS
ATCACCACCAGAAGCCTTCT+TGG	0.255696	2:-66442040	None:intergenic
CAGACTCTTGTCTTCAAATC+TGG	0.288805	2:+66441635	MsG0280010232.01.T01:CDS
TTGAAGCTGGTCGGAGAGTA+TGG	0.314070	2:+66441389	MsG0280010232.01.T01:CDS
CCTTCTTGGCTGCAGCCTTA+AGG	0.354248	2:-66442026	None:intergenic
ACCATGCTAGGGTTCTTATC+AGG	0.369101	2:+66441675	MsG0280010232.01.T01:CDS
TGGACGACGGGGCTTCTTGA+AGG	0.391435	2:-66441339	None:intergenic
CTCCTTCTCGTATGGACGAC+GGG	0.404289	2:-66441351	None:intergenic
GCTGCAGCCAAGAAGGCTTC+TGG	0.408125	2:+66442033	MsG0280010232.01.T01:CDS
TCCATACGAGAAGGAGCGTT+TGG	0.432310	2:+66441358	MsG0280010232.01.T01:CDS
TCTTCTCATCCAATGTCAAA+AGG	0.436967	2:-66441481	None:intergenic
TTATCAGGCAGAGACACATT+AGG	0.445935	2:+66441690	MsG0280010232.01.T01:CDS
CCTAGCATGGTGAATGGACT+TGG	0.448468	2:-66441663	None:intergenic
AATTAACTCACATATTCTCT+TGG	0.449883	2:+66442089	MsG0280010232.01.T01:three_prime_UTR
TTCTTTCGCTTCACGCGACC+AGG	0.452567	2:-66442003	None:intergenic
TTCTAGCATTGTTACGGATA+CGG	0.467109	2:-66441457	None:intergenic
ACCAGGAAGACCACCACCAA+AGG	0.473047	2:-66441986	None:intergenic
CGCTTCAAGTGAAAGGCATC+CGG	0.474873	2:+66442128	MsG0280010232.01.T01:three_prime_UTR
AAAGGGTTCTAGCATTGTTA+CGG	0.475438	2:-66441463	None:intergenic
AGTGAACATCCCATCCTTCA+TGG	0.476720	2:+66441918	MsG0280010232.01.T01:CDS
TCCCTCACTAGTCCCTTTGG+TGG	0.477112	2:+66441973	MsG0280010232.01.T01:CDS
CTCACTAGTCCCTTTGGTGG+TGG	0.477263	2:+66441976	MsG0280010232.01.T01:CDS
GAACCCTCGTCGGATCTTTG+AGG	0.484508	2:+66441502	MsG0280010232.01.T01:CDS
AAGAAGGCTTCTGGTGGTGA+TGG	0.495137	2:+66442042	MsG0280010232.01.T01:CDS
AACCCTCGTCGGATCTTTGA+GGG	0.508041	2:+66441503	MsG0280010232.01.T01:CDS
CTTCTCATCCAATGTCAAAA+GGG	0.512873	2:-66441480	None:intergenic
CCTTAAGGCTGCAGCCAAGA+AGG	0.517095	2:+66442026	MsG0280010232.01.T01:CDS
TCCAAACGCTCCTTCTCGTA+TGG	0.519540	2:-66441359	None:intergenic
CCAAGTCCATTCACCATGCT+AGG	0.525789	2:+66441663	MsG0280010232.01.T01:CDS
ATAAATAAGAAGGTAGGTGC+AGG	0.529691	2:-66442211	None:intergenic
TCAACCCTCACCATGAAGGA+TGG	0.531047	2:-66441928	None:intergenic
TACTGGTCGCTTCAAGTGAA+AGG	0.533941	2:+66442121	MsG0280010232.01.T01:three_prime_UTR
TTGTCTAGACATAAATAAGA+AGG	0.538232	2:-66442221	None:intergenic
AAGAACCCTAGCATGGTGAA+TGG	0.539163	2:-66441669	None:intergenic
CGTGAAGCGAAAGAACCTTA+AGG	0.541128	2:+66442011	MsG0280010232.01.T01:CDS
TGGTCGGAGAGTATGGTCTT+CGG	0.541482	2:+66441396	MsG0280010232.01.T01:CDS
GTTTCGGTAAAATGGAATGT+GGG	0.544915	2:-66441306	None:intergenic
TTGAGGAGAATGTTTAAGCA+TGG	0.560766	2:+66441536	MsG0280010232.01.T01:CDS
CAACCCTCACCATGAAGGAT+GGG	0.569875	2:-66441927	None:intergenic
TGAATCAACCCTCACCATGA+AGG	0.571223	2:-66441932	None:intergenic
GAACAAGCTCGATTATGTGT+TGG	0.578338	2:+66441577	MsG0280010232.01.T01:CDS
TTTGGATGCTGAGTTGAAGC+TGG	0.579570	2:+66441376	MsG0280010232.01.T01:CDS
CCAGGAAGACCACCACCAAA+GGG	0.581024	2:-66441985	None:intergenic
ATCCGGTGGTGACGAAAACA+AGG	0.583864	2:+66442145	MsG0280010232.01.T01:three_prime_UTR
GGTGTAAGAGAGAGCTGTGG+AGG	0.589621	2:+66441417	MsG0280010232.01.T01:CDS
TTCTGGTGGTGATGGAGATG+AGG	0.590267	2:+66442050	MsG0280010232.01.T01:CDS
AGTTTCGGTAAAATGGAATG+TGG	0.592077	2:-66441307	None:intergenic
CATCCCATCCTTCATGGTGA+GGG	0.593258	2:+66441924	MsG0280010232.01.T01:CDS
TCTTGTCTTCAAATCTGGCA+TGG	0.593384	2:+66441640	MsG0280010232.01.T01:CDS
CAAGTCCATTCACCATGCTA+GGG	0.599707	2:+66441664	MsG0280010232.01.T01:CDS
GCAGCCAAGAAGGCTTCTGG+TGG	0.599775	2:+66442036	MsG0280010232.01.T01:CDS
ACCACCAAAGGGACTAGTGA+GGG	0.615882	2:-66441974	None:intergenic
ACATCCCATCCTTCATGGTG+AGG	0.616704	2:+66441923	MsG0280010232.01.T01:CDS
CTAGACATAAATAAGAAGGT+AGG	0.616898	2:-66442217	None:intergenic
GCCCCGTCGTCCATACGAGA+AGG	0.617765	2:+66441349	MsG0280010232.01.T01:CDS
TGAAGACAAGAGTCTGAAGA+CGG	0.630423	2:-66441628	None:intergenic
TTTCGGTAAAATGGAATGTG+GGG	0.638887	2:-66441305	None:intergenic
GATGCTGAGTTGAAGCTGGT+CGG	0.640820	2:+66441380	MsG0280010232.01.T01:CDS
GCCTGATAAGAACCCTAGCA+TGG	0.650504	2:-66441676	None:intergenic
TTCAAGTGAAAGGCATCCGG+TGG	0.655152	2:+66442131	MsG0280010232.01.T01:three_prime_UTR
GCTCCTTCTCGTATGGACGA+CGG	0.657592	2:-66441352	None:intergenic
TGGTGGTGATGGAGATGAGG+AGG	0.657794	2:+66442053	MsG0280010232.01.T01:CDS
GTGTAAGAGAGAGCTGTGGA+GGG	0.669438	2:+66441418	MsG0280010232.01.T01:CDS
CACCACCAAAGGGACTAGTG+AGG	0.678453	2:-66441975	None:intergenic
GGTGGTGACGAAAACAAGGA+GGG	0.682950	2:+66442149	MsG0280010232.01.T01:three_prime_UTR
CGGTGGTGACGAAAACAAGG+AGG	0.691295	2:+66442148	MsG0280010232.01.T01:three_prime_UTR
TTCGGTGTAAGAGAGAGCTG+TGG	0.694839	2:+66441414	MsG0280010232.01.T01:CDS
GGTGACGAAAACAAGGAGGG+AGG	0.697806	2:+66442152	MsG0280010232.01.T01:three_prime_UTR
TGGATGAGAAGAACCCTCGT+CGG	0.698285	2:+66441492	MsG0280010232.01.T01:CDS
TCCTTCTCGTATGGACGACG+GGG	0.706036	2:-66441350	None:intergenic
CACCCTCAAAGATCCGACGA+GGG	0.706490	2:-66441505	None:intergenic
TCACCCTCAAAGATCCGACG+AGG	0.715310	2:-66441506	None:intergenic
CTAACTCATCCACAAAACAA+CGG	0.719127	2:-66442289	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	ATATCATTTTTTGTTTTCAT+AGG	+	Chr2:66441881-66441900	MsG0280010232.01.T01:intron	15.0%
!!!	GAATTGATAATTAAAATGAT+TGG	-	Chr2:66441740-66441759	None:intergenic	15.0%
!!!	TATCATTTTTTGTTTTCATA+GGG	+	Chr2:66441882-66441901	MsG0280010232.01.T01:intron	15.0%
!	AATTAACTCACATATTCTCT+TGG	+	Chr2:66442089-66442108	MsG0280010232.01.T01:three_prime_UTR	25.0%
!	ATAAAAGGCAGAAATAAACT+AGG	-	Chr2:66441829-66441848	None:intergenic	25.0%
!	TTGTCTAGACATAAATAAGA+AGG	-	Chr2:66442224-66442243	None:intergenic	25.0%
!!	GTAAAGGTTTAAGCAAATTT+TGG	-	Chr2:66441785-66441804	None:intergenic	25.0%
!!!	ATTTTTTGTTTTCATAGGGT+TGG	+	Chr2:66441886-66441905	MsG0280010232.01.T01:intron	25.0%
!!!	GTTTATTTCTGCCTTTTATT+TGG	+	Chr2:66441830-66441849	MsG0280010232.01.T01:intron	25.0%
!!!	TTTTTTGTTTTCATAGGGTT+GGG	+	Chr2:66441887-66441906	MsG0280010232.01.T01:intron	25.0%
	AGAAAACCCAACCAAATAAA+AGG	-	Chr2:66441844-66441863	None:intergenic	30.0%
	CTAGACATAAATAAGAAGGT+AGG	-	Chr2:66442220-66442239	None:intergenic	30.0%
!	ATTCCATTTTACCGAAACTA+TGG	+	Chr2:66441311-66441330	MsG0280010232.01.T01:CDS	30.0%
!	TTCCATTTTACCGAAACTAT+GGG	+	Chr2:66441312-66441331	MsG0280010232.01.T01:CDS	30.0%
!!	ATTTCTGCCTTTTATTTGGT+TGG	+	Chr2:66441834-66441853	MsG0280010232.01.T01:intron	30.0%
!!	TTTCTGCCTTTTATTTGGTT+GGG	+	Chr2:66441835-66441854	MsG0280010232.01.T01:intron	30.0%
	AGTTTCGGTAAAATGGAATG+TGG	-	Chr2:66441310-66441329	None:intergenic	35.0%
	ATAAATAAGAAGGTAGGTGC+AGG	-	Chr2:66442214-66442233	None:intergenic	35.0%
	CTAACTCATCCACAAAACAA+CGG	-	Chr2:66442292-66442311	None:intergenic	35.0%
	CTTCTCATCCAATGTCAAAA+GGG	-	Chr2:66441483-66441502	None:intergenic	35.0%
	GATCAGATAATCAACGGTAA+AGG	-	Chr2:66441801-66441820	None:intergenic	35.0%
	GTTTCGGTAAAATGGAATGT+GGG	-	Chr2:66441309-66441328	None:intergenic	35.0%
	TCTTCTCATCCAATGTCAAA+AGG	-	Chr2:66441484-66441503	None:intergenic	35.0%
	TTCCCATAGTTTCGGTAAAA+TGG	-	Chr2:66441317-66441336	None:intergenic	35.0%
	TTCTAGCATTGTTACGGATA+CGG	-	Chr2:66441460-66441479	None:intergenic	35.0%
	TTGAGGAGAATGTTTAAGCA+TGG	+	Chr2:66441536-66441555	MsG0280010232.01.T01:CDS	35.0%
	TTTCGGTAAAATGGAATGTG+GGG	-	Chr2:66441308-66441327	None:intergenic	35.0%
!	AAAGGGTTCTAGCATTGTTA+CGG	-	Chr2:66441466-66441485	None:intergenic	35.0%
!	GTCTAGGATCAGATAATCAA+CGG	-	Chr2:66441807-66441826	None:intergenic	35.0%
!	TGAAGGTTTTCCCATAGTTT+CGG	-	Chr2:66441325-66441344	None:intergenic	35.0%
!!	ATTTTGCTACCGTTGTTTTG+TGG	+	Chr2:66442280-66442299	MsG0280010232.01.T01:three_prime_UTR	35.0%
!!	GTTTAAGCAAATTTTGGCAG+TGG	-	Chr2:66441779-66441798	None:intergenic	35.0%
!!!	TCTCTTGGTTTTGTTCATAC+TGG	+	Chr2:66442104-66442123	MsG0280010232.01.T01:three_prime_UTR	35.0%
	CAGACTCTTGTCTTCAAATC+TGG	+	Chr2:66441635-66441654	MsG0280010232.01.T01:CDS	40.0%
	CAGTGGCTACAAAACATGTA+AGG	-	Chr2:66441762-66441781	None:intergenic	40.0%
	GAACAAGCTCGATTATGTGT+TGG	+	Chr2:66441577-66441596	MsG0280010232.01.T01:CDS	40.0%
	GGCAGAAATAAACTAGGTCT+AGG	-	Chr2:66441823-66441842	None:intergenic	40.0%
	TCTTGTCTTCAAATCTGGCA+TGG	+	Chr2:66441640-66441659	MsG0280010232.01.T01:CDS	40.0%
	TGAAGACAAGAGTCTGAAGA+CGG	-	Chr2:66441631-66441650	None:intergenic	40.0%
	TTATCAGGCAGAGACACATT+AGG	+	Chr2:66441690-66441709	MsG0280010232.01.T01:CDS	40.0%
!	TGCTAGAACCCTTTTGACAT+TGG	+	Chr2:66441472-66441491	MsG0280010232.01.T01:CDS	40.0%
!!	TTTGTTTTCATAGGGTTGGG+AGG	+	Chr2:66441890-66441909	MsG0280010232.01.T01:intron	40.0%
	AAGAACCCTAGCATGGTGAA+TGG	-	Chr2:66441672-66441691	None:intergenic	45.0%
	ACCATGCTAGGGTTCTTATC+AGG	+	Chr2:66441675-66441694	MsG0280010232.01.T01:CDS	45.0%
	AGTGAACATCCCATCCTTCA+TGG	+	Chr2:66441918-66441937	MsG0280010232.01.T01:CDS	45.0%
	CAAGTCCATTCACCATGCTA+GGG	+	Chr2:66441664-66441683	MsG0280010232.01.T01:CDS	45.0%
	CGTGAAGCGAAAGAACCTTA+AGG	+	Chr2:66442011-66442030	MsG0280010232.01.T01:CDS	45.0%
	TACTGGTCGCTTCAAGTGAA+AGG	+	Chr2:66442121-66442140	MsG0280010232.01.T01:three_prime_UTR	45.0%
	TGAATCAACCCTCACCATGA+AGG	-	Chr2:66441935-66441954	None:intergenic	45.0%
!	TTTGGATGCTGAGTTGAAGC+TGG	+	Chr2:66441376-66441395	MsG0280010232.01.T01:CDS	45.0%
!	TTTTCCCTCACTAGTCCCTT+TGG	+	Chr2:66441970-66441989	MsG0280010232.01.T01:CDS	45.0%
	AACCCTCGTCGGATCTTTGA+GGG	+	Chr2:66441503-66441522	MsG0280010232.01.T01:CDS	50.0%
	ACATCCCATCCTTCATGGTG+AGG	+	Chr2:66441923-66441942	MsG0280010232.01.T01:CDS	50.0%
	ATCACCACCAGAAGCCTTCT+TGG	-	Chr2:66442043-66442062	None:intergenic	50.0%
	CAACCCTCACCATGAAGGAT+GGG	-	Chr2:66441930-66441949	None:intergenic	50.0%
	CATCCCATCCTTCATGGTGA+GGG	+	Chr2:66441924-66441943	MsG0280010232.01.T01:CDS	50.0%
	CCAAGTCCATTCACCATGCT+AGG	+	Chr2:66441663-66441682	MsG0280010232.01.T01:CDS	50.0%
	GCCTGATAAGAACCCTAGCA+TGG	-	Chr2:66441679-66441698	None:intergenic	50.0%
	GTGTAAGAGAGAGCTGTGGA+GGG	+	Chr2:66441418-66441437	MsG0280010232.01.T01:CDS	50.0%
	TCAACCCTCACCATGAAGGA+TGG	-	Chr2:66441931-66441950	None:intergenic	50.0%
	TCCAAACGCTCCTTCTCGTA+TGG	-	Chr2:66441362-66441381	None:intergenic	50.0%
	TGGATGAGAAGAACCCTCGT+CGG	+	Chr2:66441492-66441511	MsG0280010232.01.T01:CDS	50.0%
	TTGAAGCTGGTCGGAGAGTA+TGG	+	Chr2:66441389-66441408	MsG0280010232.01.T01:CDS	50.0%
!	AAGAAGGCTTCTGGTGGTGA+TGG	+	Chr2:66442042-66442061	MsG0280010232.01.T01:CDS	50.0%
!	ACCACCAAAGGGACTAGTGA+GGG	-	Chr2:66441977-66441996	None:intergenic	50.0%
!	ATCCGGTGGTGACGAAAACA+AGG	+	Chr2:66442145-66442164	MsG0280010232.01.T01:three_prime_UTR	50.0%
!	CCTAGCATGGTGAATGGACT+TGG	-	Chr2:66441666-66441685	None:intergenic	50.0%
!	GATGCTGAGTTGAAGCTGGT+CGG	+	Chr2:66441380-66441399	MsG0280010232.01.T01:CDS	50.0%
!	GGTGGTGACGAAAACAAGGA+GGG	+	Chr2:66442149-66442168	MsG0280010232.01.T01:three_prime_UTR	50.0%
!	TGGTCGGAGAGTATGGTCTT+CGG	+	Chr2:66441396-66441415	MsG0280010232.01.T01:CDS	50.0%
!	TTCGGTGTAAGAGAGAGCTG+TGG	+	Chr2:66441414-66441433	MsG0280010232.01.T01:CDS	50.0%
!	TTGAGGGTGACGCACTTTTG+AGG	+	Chr2:66441519-66441538	MsG0280010232.01.T01:CDS	50.0%
!	TTTTCATAGGGTTGGGAGGC+AGG	+	Chr2:66441894-66441913	MsG0280010232.01.T01:intron	50.0%
!!	CGCTTCAAGTGAAAGGCATC+CGG	+	Chr2:66442128-66442147	MsG0280010232.01.T01:three_prime_UTR	50.0%
!!	TCCATACGAGAAGGAGCGTT+TGG	+	Chr2:66441358-66441377	MsG0280010232.01.T01:CDS	50.0%
!!	TTCAAGTGAAAGGCATCCGG+TGG	+	Chr2:66442131-66442150	MsG0280010232.01.T01:three_prime_UTR	50.0%
!!	TTCTGGTGGTGATGGAGATG+AGG	+	Chr2:66442050-66442069	MsG0280010232.01.T01:CDS	50.0%
!!!	CTCCTTGTTTTCGTCACCAC+CGG	-	Chr2:66442150-66442169	None:intergenic	50.0%
	ACCAGGAAGACCACCACCAA+AGG	-	Chr2:66441989-66442008	None:intergenic	55.0%
	CACCCTCAAAGATCCGACGA+GGG	-	Chr2:66441508-66441527	None:intergenic	55.0%
	CCAGGAAGACCACCACCAAA+GGG	-	Chr2:66441988-66442007	None:intergenic	55.0%
	CCTTAAGGCTGCAGCCAAGA+AGG	+	Chr2:66442026-66442045	MsG0280010232.01.T01:CDS	55.0%
	CCTTCTTGGCTGCAGCCTTA+AGG	-	Chr2:66442029-66442048	None:intergenic	55.0%
	CTCACTAGTCCCTTTGGTGG+TGG	+	Chr2:66441976-66441995	MsG0280010232.01.T01:CDS	55.0%
	CTCCTTCTCGTATGGACGAC+GGG	-	Chr2:66441354-66441373	None:intergenic	55.0%
	GAACCCTCGTCGGATCTTTG+AGG	+	Chr2:66441502-66441521	MsG0280010232.01.T01:CDS	55.0%
	GCTCCTTCTCGTATGGACGA+CGG	-	Chr2:66441355-66441374	None:intergenic	55.0%
	GGTGACGAAAACAAGGAGGG+AGG	+	Chr2:66442152-66442171	MsG0280010232.01.T01:three_prime_UTR	55.0%
	GGTGTAAGAGAGAGCTGTGG+AGG	+	Chr2:66441417-66441436	MsG0280010232.01.T01:CDS	55.0%
	TCACCCTCAAAGATCCGACG+AGG	-	Chr2:66441509-66441528	None:intergenic	55.0%
	TCCCTCACTAGTCCCTTTGG+TGG	+	Chr2:66441973-66441992	MsG0280010232.01.T01:CDS	55.0%
	TCCTTCTCGTATGGACGACG+GGG	-	Chr2:66441353-66441372	None:intergenic	55.0%
	TTCTTTCGCTTCACGCGACC+AGG	-	Chr2:66442006-66442025	None:intergenic	55.0%
!	CACCACCAAAGGGACTAGTG+AGG	-	Chr2:66441978-66441997	None:intergenic	55.0%
!	CGGTGGTGACGAAAACAAGG+AGG	+	Chr2:66442148-66442167	MsG0280010232.01.T01:three_prime_UTR	55.0%
!!	TGGTGGTGATGGAGATGAGG+AGG	+	Chr2:66442053-66442072	MsG0280010232.01.T01:CDS	55.0%
	GCAGCCAAGAAGGCTTCTGG+TGG	+	Chr2:66442036-66442055	MsG0280010232.01.T01:CDS	60.0%
	GCTGCAGCCAAGAAGGCTTC+TGG	+	Chr2:66442033-66442052	MsG0280010232.01.T01:CDS	60.0%
	TGGACGACGGGGCTTCTTGA+AGG	-	Chr2:66441342-66441361	None:intergenic	60.0%
!!	CCCTTTGGTGGTGGTCTTCC+TGG	+	Chr2:66441985-66442004	MsG0280010232.01.T01:CDS	60.0%
	GCCCCGTCGTCCATACGAGA+AGG	+	Chr2:66441349-66441368	MsG0280010232.01.T01:CDS	65.0%

Chromosome	Type	Strat	End	Strand	Name
Chr2	gene	66441294	66442319	66441294	ID=MsG0280010232.01;Name=MsG0280010232.01
Chr2	mRNA	66441294	66442319	66441294	ID=MsG0280010232.01.T01;Parent=MsG0280010232.01;Name=MsG0280010232.01.T01;_AED=0.19;_eAED=0.19;_QI=8\|1\|1\|1\|1\|1\|2\|233\|197
Chr2	exon	66441294	66441711	66441294	ID=MsG0280010232.01.T01:exon:5346;Parent=MsG0280010232.01.T01
Chr2	exon	66441903	66442319	66441903	ID=MsG0280010232.01.T01:exon:5347;Parent=MsG0280010232.01.T01
Chr2	five_prime_UTR	66441294	66441301	66441294	ID=MsG0280010232.01.T01:five_prime_utr;Parent=MsG0280010232.01.T01
Chr2	CDS	66441302	66441711	66441302	ID=MsG0280010232.01.T01:cds;Parent=MsG0280010232.01.T01
Chr2	CDS	66441903	66442086	66441903	ID=MsG0280010232.01.T01:cds;Parent=MsG0280010232.01.T01
Chr2	three_prime_UTR	66442087	66442319	66442087	ID=MsG0280010232.01.T01:three_prime_utr;Parent=MsG0280010232.01.T01

Gene Sequence

>MsG0280010232.01.T01

ATGCCCCACATTCCATTTTACCGAAACTATGGGAAAACCTTCAAGAAGCCCCGTCGTCCATACGAGAAGGAGCGTTTGGATGCTGAGTTGAAGCTGGTCGGAGAGTATGGTCTTCGGTGTAAGAGAGAGCTGTGGAGGGTTCAATACTCTCTGAGCCGTATCCGTAACAATGCTAGAACCCTTTTGACATTGGATGAGAAGAACCCTCGTCGGATCTTTGAGGGTGACGCACTTTTGAGGAGAATGTTTAAGCATGGTCTTCTCGATGAGACTCAGAACAAGCTCGATTATGTGTTGGCTCTCACTGTTGAGAATTTTCTCGAGCGCCGTCTTCAGACTCTTGTCTTCAAATCTGGCATGGCCAAGTCCATTCACCATGCTAGGGTTCTTATCAGGCAGAGACACATTAGGGTTGGGAGGCAGGTAGTGAACATCCCATCCTTCATGGTGAGGGTTGATTCACAGAAGCACATTGACTTTTCCCTCACTAGTCCCTTTGGTGGTGGTCTTCCTGGTCGCGTGAAGCGAAAGAACCTTAAGGCTGCAGCCAAGAAGGCTTCTGGTGGTGATGGAGATGAGGAGGATGAAGATTAA

Protein sequence

>MsG0280010232.01.T01

MPHIPFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYSLSRIRNNARTLLTLDEKNPRRIFEGDALLRRMFKHGLLDETQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGLPGRVKRKNLKAAAKKASGGDGDEEDED*