AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480021985.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480021985.01.T01 MTR_4g080120 82.033 423 54 6 1 417 1 407 0.0 552
MsG0480021985.01.T01 MTR_0059s0060 39.500 200 114 2 205 404 159 351 1.81e-42 153
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480021985.01.T01 AT2G42710 43.820 445 190 10 1 416 1 414 3.97e-99 302
MsG0480021985.01.T01 AT3G63490 40.500 200 112 2 205 404 145 337 2.00e-41 150
MsG0480021985.01.T01 AT3G63490 38.889 144 83 2 205 348 145 283 1.64e-22 97.1

Find 15 sgRNAs with CRISPR-Local

Find 464 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTATAGTTATCTGCTGCTT+TGG 0.322571 4:-66821317 None:intergenic
TCATTACCATTGATCTTGTA+AGG 0.374789 4:+66821431 MsG0480021985.01.T01:exon
TGTAAGGTTTGTTCTGTGAT+AGG 0.402256 4:+66821447 MsG0480021985.01.T01:exon
TAACTATAAGAAAGCGCATA+TGG 0.444321 4:+66821330 MsG0480021985.01.T01:exon
GATAACGACTGTATTGATAC+AGG 0.462862 4:-66821295 None:intergenic
TGGTATAAATCACATGGATA+CGG 0.481888 4:+66821350 MsG0480021985.01.T01:exon
AACAAACCTTACAAGATCAA+TGG 0.518388 4:-66821437 None:intergenic
CGCATATGGTATAAATCACA+TGG 0.521839 4:+66821344 MsG0480021985.01.T01:exon
TGTATTGATACAGGTATACC+TGG 0.528734 4:-66821286 None:intergenic
GGTATAAATCACATGGATAC+GGG 0.529437 4:+66821351 MsG0480021985.01.T01:exon
GTATTGATGCAGATTGGCCC+AGG 0.567803 4:+66821268 MsG0480021985.01.T01:intron
TAAATCACATGGATACGGGC+AGG 0.569832 4:+66821355 MsG0480021985.01.T01:exon
CGGGCAGGCTTTCAGCGTGA+AGG 0.589183 4:+66821370 MsG0480021985.01.T01:exon
AAGGTTTGTTCTGTGATAGG+TGG 0.645739 4:+66821450 MsG0480021985.01.T01:exon
GTATTGATACAGGTATACCT+GGG 0.710538 4:-66821285 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTTTTTTTTAATGTGT+AGG + Chr4:66818943-66818962 MsG0480021984.01.T01:intron 10.0%
!!! TTTTATCATAAACAATATTT+TGG - Chr4:66818380-66818399 None:intergenic 10.0%
!!! TTTTTTTTTTTTAATGTGTA+GGG + Chr4:66818944-66818963 MsG0480021984.01.T01:intron 10.0%
!! AAAGTATAATTGTAAATACA+GGG - Chr4:66817293-66817312 None:intergenic 15.0%
!! AATAGAATTTATACTCTTAT+AGG + Chr4:66818650-66818669 MsG0480021984.01.T01:intron 15.0%
!! ATAAGAATAATGATTTATTG+AGG + Chr4:66819818-66819837 MsG0480021985.01.T01:intron 15.0%
!! ATATTGTTTATGATAAAACA+TGG + Chr4:66818382-66818401 MsG0480021984.01.T01:intron 15.0%
!!! AAATTGTGATTTTATATTCA+CGG + Chr4:66820268-66820287 MsG0480021985.01.T01:intron 15.0%
!!! ATGTTTATTTTACGTATTTA+AGG + Chr4:66820037-66820056 MsG0480021985.01.T01:intron 15.0%
!!! ATTCTTTATTTAGAAGTTAA+CGG + Chr4:66817549-66817568 MsG0480021984.01.T01:intron 15.0%
!!! CTTTTATTTTTCAAACATAA+TGG - Chr4:66819763-66819782 None:intergenic 15.0%
!! AACTTTCAATAAGTAGTTAT+TGG + Chr4:66815829-66815848 MsG0480021984.01.T01:intron 20.0%
!! AAGTATAAGATCAAAGATAA+TGG - Chr4:66819918-66819937 None:intergenic 20.0%
!! AATATAATTGCATATTCTTC+AGG + Chr4:66817016-66817035 MsG0480021984.01.T01:intron 20.0%
!! ATAATGATTTATTGAGGTAA+TGG + Chr4:66819824-66819843 MsG0480021985.01.T01:intron 20.0%
!! ATCATAGTAGAATAAGTTAA+AGG - Chr4:66819578-66819597 None:intergenic 20.0%
!! ATCATTATTCTTATATTCAC+TGG - Chr4:66819812-66819831 None:intergenic 20.0%
!! ATTGTTTATAACAACTCTAT+TGG + Chr4:66816680-66816699 MsG0480021984.01.T01:intron 20.0%
!! CAAAGTATAATTGTAAATAC+AGG - Chr4:66817294-66817313 None:intergenic 20.0%
!! GAGAAAATACTACTATATTT+AGG - Chr4:66818052-66818071 None:intergenic 20.0%
!! TAACTTATTCTACTATGATT+AGG + Chr4:66819579-66819598 MsG0480021985.01.T01:intron 20.0%
!! TATTAAATGATAGTAAGCAT+TGG - Chr4:66817000-66817019 None:intergenic 20.0%
!! TGTACAGTTATCTAAATTAA+TGG + Chr4:66818768-66818787 MsG0480021984.01.T01:intron 20.0%
!!! AATTGTGATTTTATATTCAC+GGG + Chr4:66820269-66820288 MsG0480021985.01.T01:intron 20.0%
!!! ATAAATTATGCACTTTTTTG+TGG + Chr4:66820450-66820469 MsG0480021985.01.T01:intron 20.0%
!!! ATGTTAAATGAGTTTTAACA+AGG + Chr4:66820548-66820567 MsG0480021985.01.T01:intron 20.0%
!!! TGATCATCTAAAATAAGTTA+AGG - Chr4:66816071-66816090 None:intergenic 20.0%
!!! TTTTAGAACTTCATTACAAT+AGG - Chr4:66816393-66816412 None:intergenic 20.0%
!!! TTTTATATTCCAGTATGTTT+TGG + Chr4:66820403-66820422 MsG0480021985.01.T01:intron 20.0%
!!! TTTTCCCATTCTAAAATTTA+TGG + Chr4:66817857-66817876 MsG0480021984.01.T01:intron 20.0%
! AAAAAAACAGATTGTGATGT+AGG - Chr4:66820012-66820031 None:intergenic 25.0%
! AAAAAAGGAGTCATGTTATT+AGG + Chr4:66815786-66815805 MsG0480021984.01.T01:intron 25.0%
! AACAGAATATAACAGTGATA+TGG - Chr4:66817496-66817515 None:intergenic 25.0%
! AATATTATTCTTTGTCTACG+AGG + Chr4:66817237-66817256 MsG0480021984.01.T01:intron 25.0%
! AATTTACAAAAGCAAAAGCT+TGG - Chr4:66816210-66816229 None:intergenic 25.0%
! ACAGAATATAACAGTGATAT+GGG - Chr4:66817495-66817514 None:intergenic 25.0%
! ACATAAGTGTGAAAAACATA+AGG + Chr4:66820961-66820980 MsG0480021985.01.T01:intron 25.0%
! ACTACTACAAAATGATGATT+TGG + Chr4:66819876-66819895 MsG0480021985.01.T01:intron 25.0%
! ACTTAAAAGAAAGAAAGAAC+AGG - Chr4:66821233-66821252 None:intergenic 25.0%
! AGAAACTATTAGGAAAGAAT+TGG + Chr4:66818339-66818358 MsG0480021984.01.T01:intron 25.0%
! AGAATTTATACTCTTATAGG+TGG + Chr4:66818653-66818672 MsG0480021984.01.T01:intron 25.0%
! ATAAGGTCTAGAAAATCTAA+AGG - Chr4:66816116-66816135 None:intergenic 25.0%
! ATAGTAGAATAAGTTAAAGG+TGG - Chr4:66819575-66819594 None:intergenic 25.0%
! ATTTACAAAAGCAAAAGCTT+GGG - Chr4:66816209-66816228 None:intergenic 25.0%
! CAAAATTGTAGATATACGAA+TGG + Chr4:66816421-66816440 MsG0480021984.01.T01:intron 25.0%
! CGTGATAATTATGTTTAAAG+TGG + Chr4:66816272-66816291 MsG0480021984.01.T01:intron 25.0%
! CTGCTATGAAATACAAATAT+CGG + Chr4:66819730-66819749 MsG0480021985.01.T01:intron 25.0%
! CTTGTAGATTTACTTACAAT+AGG + Chr4:66819149-66819168 MsG0480021984.01.T01:intron 25.0%
! TAAAAACAGGAATACAGTAA+TGG + Chr4:66820187-66820206 MsG0480021985.01.T01:intron 25.0%
! TAACATTCATAAGTTACCTT+AGG - Chr4:66817626-66817645 None:intergenic 25.0%
! TAAGTAAATCTACAAGTAGT+TGG - Chr4:66819145-66819164 None:intergenic 25.0%
! TAGACCTTATCTTGTAAATT+AGG + Chr4:66816126-66816145 MsG0480021984.01.T01:intron 25.0%
! TATAATTGTAAATACAGGGT+AGG - Chr4:66817289-66817308 None:intergenic 25.0%
! TATTCTACTATGATTAGGTA+TGG + Chr4:66819584-66819603 MsG0480021985.01.T01:intron 25.0%
! TCATGTTATTAGGATATTAG+TGG + Chr4:66815796-66815815 MsG0480021984.01.T01:intron 25.0%
! TTACAAATGACAACAACATT+TGG - Chr4:66816869-66816888 None:intergenic 25.0%
!! AACCATAACATCAATTTTCA+CGG - Chr4:66819382-66819401 None:intergenic 25.0%
!! AAGTAAATCAATTTTGCATG+TGG + Chr4:66819090-66819109 MsG0480021984.01.T01:CDS 25.0%
!! AGAATGAAGTAGTAACTTTT+CGG - Chr4:66820063-66820082 None:intergenic 25.0%
!! AGTAAATCAATTTTGCATGT+GGG + Chr4:66819091-66819110 MsG0480021984.01.T01:CDS 25.0%
!! ATTGTGATTTTATATTCACG+GGG + Chr4:66820270-66820289 MsG0480021985.01.T01:intron 25.0%
!! CATTCGTATATCTACAATTT+TGG - Chr4:66816423-66816442 None:intergenic 25.0%
!! GGAATTTGAATTTGAAATGA+TGG + Chr4:66820208-66820227 MsG0480021985.01.T01:intron 25.0%
!! TACAATAGGAATTTCTTTTC+AGG - Chr4:66816379-66816398 None:intergenic 25.0%
!! TAGTATTTTCTCTGTTTGTA+TGG + Chr4:66818060-66818079 MsG0480021984.01.T01:intron 25.0%
!! TCACTGTTATATTCTGTTTT+TGG + Chr4:66817498-66817517 MsG0480021984.01.T01:intron 25.0%
!! TGAATTGATAGTTAGAGAAA+GGG + Chr4:66817312-66817331 MsG0480021984.01.T01:intron 25.0%
!! TGCTAAATTAATGCAGTTTT+AGG + Chr4:66816746-66816765 MsG0480021984.01.T01:intron 25.0%
!! TTAGAATTTTCATCAACACT+TGG + Chr4:66820644-66820663 MsG0480021985.01.T01:intron 25.0%
!! TTGAATTGATAGTTAGAGAA+AGG + Chr4:66817311-66817330 MsG0480021984.01.T01:intron 25.0%
!! TTTGAGTAGAATTAAGTTGT+TGG + Chr4:66815710-66815729 MsG0480021984.01.T01:intron 25.0%
!! TTTTTAATCCATGTAGCATT+AGG - Chr4:66819613-66819632 None:intergenic 25.0%
!!! AACAAATGTTCTTTTTTGTC+TGG + Chr4:66816446-66816465 MsG0480021984.01.T01:intron 25.0%
!!! ACAAATGTTCTTTTTTGTCT+GGG + Chr4:66816447-66816466 MsG0480021984.01.T01:intron 25.0%
!!! ATTGTTGTTTAGAAACTTTG+TGG + Chr4:66816239-66816258 MsG0480021984.01.T01:intron 25.0%
!!! CTCTCCATAAATTTTAGAAT+GGG - Chr4:66817864-66817883 None:intergenic 25.0%
!!! CTGTTGTTACTTTTTTTTGA+GGG + Chr4:66820098-66820117 MsG0480021985.01.T01:intron 25.0%
!!! TAGAAAATCTAAAGGTGTTA+TGG - Chr4:66816108-66816127 None:intergenic 25.0%
!!! TCTCTCCATAAATTTTAGAA+TGG - Chr4:66817865-66817884 None:intergenic 25.0%
!!! TCTGTTGTTACTTTTTTTTG+AGG + Chr4:66820097-66820116 MsG0480021985.01.T01:intron 25.0%
!!! TGTTGTTACTTTTTTTTGAG+GGG + Chr4:66820099-66820118 MsG0480021985.01.T01:intron 25.0%
!!! TTAATGCAGTTTTAGGAATT+AGG + Chr4:66816753-66816772 MsG0480021984.01.T01:intron 25.0%
!!! TTTTTGATTTCAGCAAACAT+GGG + Chr4:66817342-66817361 MsG0480021984.01.T01:intron 25.0%
!!! TTTTTTGATTTCAGCAAACA+TGG + Chr4:66817341-66817360 MsG0480021984.01.T01:intron 25.0%
AAAACTCATTTAACATCCCT+CGG - Chr4:66820544-66820563 None:intergenic 30.0%
AACAAACCTTACAAGATCAA+TGG - Chr4:66821440-66821459 None:intergenic 30.0%
AACCGTGAAAATTGATGTTA+TGG + Chr4:66819377-66819396 MsG0480021985.01.T01:intron 30.0%
AACTAAGCATACATATACAG+AGG - Chr4:66817953-66817972 None:intergenic 30.0%
AACTGTTATGCTCTCTAAAT+TGG - Chr4:66816476-66816495 None:intergenic 30.0%
AAGAATTGGAGATTATGAGA+TGG + Chr4:66818353-66818372 MsG0480021984.01.T01:intron 30.0%
ACTAAGCATACATATACAGA+GGG - Chr4:66817952-66817971 None:intergenic 30.0%
ACTCACTTAAGTCTAAGTAT+TGG + Chr4:66816904-66816923 MsG0480021984.01.T01:intron 30.0%
AGCAATTGATATTGATACGA+AGG + Chr4:66817646-66817665 MsG0480021984.01.T01:intron 30.0%
AGCTCCTAATTTACAAGATA+AGG - Chr4:66816133-66816152 None:intergenic 30.0%
AGGGAAAGTTATAATTGCTA+AGG - Chr4:66818584-66818603 None:intergenic 30.0%
ATACTACTATATTTAGGCGT+AGG - Chr4:66818046-66818065 None:intergenic 30.0%
ATCACTACAGATAATGATAG+AGG - Chr4:66821170-66821189 None:intergenic 30.0%
ATCATTGTCATAAATGCTAC+AGG - Chr4:66816727-66816746 None:intergenic 30.0%
ATGCAAGTTATGGTGAAAAA+AGG + Chr4:66820921-66820940 MsG0480021985.01.T01:intron 30.0%
CAGAATATAACAGTGATATG+GGG - Chr4:66817494-66817513 None:intergenic 30.0%
CATATTTGCATGTAATGTGT+AGG + Chr4:66816569-66816588 MsG0480021984.01.T01:intron 30.0%
CCTCAGTTAAAAGTTTCTTA+AGG + Chr4:66816161-66816180 MsG0480021984.01.T01:intron 30.0%
CTACAAAGAAGAGAATTTAC+GGG + Chr4:66819222-66819241 MsG0480021984.01.T01:CDS 30.0%
CTATCATTATCTGTAGTGAT+GGG + Chr4:66821170-66821189 MsG0480021985.01.T01:intron 30.0%
CTCATATATGCAGTCAATAA+GGG + Chr4:66816309-66816328 MsG0480021984.01.T01:intron 30.0%
CTGTGAAGATGAAAAAATGA+AGG + Chr4:66815434-66815453 MsG0480021984.01.T01:intron 30.0%
GAGAAAACCTGAGAAAATTA+TGG - Chr4:66819423-66819442 None:intergenic 30.0%
GCATGATCAACAAAATTGTT+TGG - Chr4:66817829-66817848 None:intergenic 30.0%
GCTACAAAGAAGAGAATTTA+CGG + Chr4:66819221-66819240 MsG0480021984.01.T01:CDS 30.0%
GTCATAGTTGATTATATCGA+TGG - Chr4:66820327-66820346 None:intergenic 30.0%
GTTCATTTGAGCTTATCTAT+TGG - Chr4:66816015-66816034 None:intergenic 30.0%
GTTTATGTGAATGCAAGTTA+TGG + Chr4:66820911-66820930 MsG0480021985.01.T01:intron 30.0%
TAAATACTAGAGAGAGAGTA+GGG + Chr4:66818192-66818211 MsG0480021984.01.T01:intron 30.0%
TAAGCACAAAAAGTTTACAG+AGG - Chr4:66817467-66817486 None:intergenic 30.0%
TAAGTGTGAAAAACATAAGG+TGG + Chr4:66820964-66820983 MsG0480021985.01.T01:intron 30.0%
TAGAATATCATTCTCTGTCT+AGG + Chr4:66817205-66817224 MsG0480021984.01.T01:intron 30.0%
TATCATTATCTGTAGTGATG+GGG + Chr4:66821171-66821190 MsG0480021985.01.T01:intron 30.0%
TCATAGCAGTATAGTAGTAT+TGG - Chr4:66819719-66819738 None:intergenic 30.0%
TCATTACCATTGATCTTGTA+AGG + Chr4:66821431-66821450 MsG0480021985.01.T01:exon 30.0%
TCTATCATTATCTGTAGTGA+TGG + Chr4:66821169-66821188 MsG0480021985.01.T01:intron 30.0%
TCTTTCCTAATAGTTTCTCT+AGG - Chr4:66818337-66818356 None:intergenic 30.0%
TGGAGAAAAAGATGATATGT+CGG + Chr4:66819349-66819368 MsG0480021985.01.T01:intron 30.0%
TGGGAAATTGTTGTGAAAAA+AGG + Chr4:66815771-66815790 MsG0480021984.01.T01:intron 30.0%
TGGTATAAATCACATGGATA+CGG + Chr4:66821350-66821369 MsG0480021985.01.T01:exon 30.0%
TGTATCTTGCTTTGCTAAAT+TGG + Chr4:66816832-66816851 MsG0480021984.01.T01:intron 30.0%
TTAGTAAATCAGTGGTTGTT+TGG - Chr4:66820598-66820617 None:intergenic 30.0%
TTATGATACCTAGGAGTTAT+GGG - Chr4:66819677-66819696 None:intergenic 30.0%
TTCATCTACAGACATACAAA+AGG - Chr4:66820429-66820448 None:intergenic 30.0%
TTCTGTGGAGGATAATAATT+GGG + Chr4:66820379-66820398 MsG0480021985.01.T01:intron 30.0%
TTGCCAATGACTAAAGAAAT+AGG + Chr4:66817168-66817187 MsG0480021984.01.T01:intron 30.0%
TTGGAACATTACAGGTAAAA+CGG - Chr4:66816981-66817000 None:intergenic 30.0%
TTTACAAAAGCAAAAGCTTG+GGG - Chr4:66816208-66816227 None:intergenic 30.0%
TTTATAACAACTCTATTGGC+TGG + Chr4:66816684-66816703 MsG0480021984.01.T01:intron 30.0%
TTTATGATACCTAGGAGTTA+TGG - Chr4:66819678-66819697 None:intergenic 30.0%
TTTCTGTGGAGGATAATAAT+TGG + Chr4:66820378-66820397 MsG0480021985.01.T01:intron 30.0%
! AAAATCGTATTGATGCAGAT+TGG + Chr4:66821262-66821281 MsG0480021985.01.T01:intron 30.0%
! AAGGGACAACAGATATTTTA+CGG + Chr4:66816327-66816346 MsG0480021984.01.T01:intron 30.0%
! ACATATCATCTTTTTCTCCA+AGG - Chr4:66819349-66819368 None:intergenic 30.0%
! GAACCTATTTCTTTAGTCAT+TGG - Chr4:66817174-66817193 None:intergenic 30.0%
! GGATTGATTTAACTCTTGTT+TGG + Chr4:66818972-66818991 MsG0480021984.01.T01:intron 30.0%
! GTAGTAGTGATTTAACTTTG+AGG - Chr4:66819864-66819883 None:intergenic 30.0%
! GTATATGTATGCTTAGTTTG+TGG + Chr4:66817955-66817974 MsG0480021984.01.T01:intron 30.0%
! GTTTCGAGATTTTACTTTCT+TGG - Chr4:66818614-66818633 None:intergenic 30.0%
! TAACTATAAGAAAGCGCATA+TGG + Chr4:66821330-66821349 MsG0480021985.01.T01:exon 30.0%
! TAGTGATTTAACTTTGAGGA+AGG - Chr4:66819860-66819879 None:intergenic 30.0%
! TATTGATATGTTTTGCAGCT+AGG + Chr4:66818998-66819017 MsG0480021984.01.T01:intron 30.0%
! TCTATTTGCTAACCTTAACT+TGG - Chr4:66815533-66815552 None:intergenic 30.0%
! TTTTTAATGTGTAGGGTATG+TGG + Chr4:66818951-66818970 MsG0480021984.01.T01:intron 30.0%
!! AAACTTTAAAGTGCAACAAG+GGG - Chr4:66816645-66816664 None:intergenic 30.0%
!! AGTGAAGAAAAGGCATTAAT+TGG + Chr4:66821144-66821163 MsG0480021985.01.T01:intron 30.0%
!! ATAGGAATTTCTTTTCAGGA+AGG - Chr4:66816375-66816394 None:intergenic 30.0%
!! ATTGGTTTGAATATAAGCCT+GGG - Chr4:66819701-66819720 None:intergenic 30.0%
!! CAAACTTTAAAGTGCAACAA+GGG - Chr4:66816646-66816665 None:intergenic 30.0%
!! CCTTAAGAAACTTTTAACTG+AGG - Chr4:66816164-66816183 None:intergenic 30.0%
!! CTTCTAAAGCTTATTTGAAC+TGG + Chr4:66818797-66818816 MsG0480021984.01.T01:intron 30.0%
!! TAAGTATTGGTTCCATTGAT+TGG + Chr4:66816917-66816936 MsG0480021984.01.T01:intron 30.0%
!! TAGAAAAGATGGTGGAAAAT+AGG + Chr4:66818228-66818247 MsG0480021984.01.T01:intron 30.0%
!! TATTGGTTTGAATATAAGCC+TGG - Chr4:66819702-66819721 None:intergenic 30.0%
!! TCAAACTTTAAAGTGCAACA+AGG - Chr4:66816647-66816666 None:intergenic 30.0%
!! TGATATTAGTAGTTTTGCTC+AGG + Chr4:66817390-66817409 MsG0480021984.01.T01:intron 30.0%
!! TGCTCTTTTAATTACATGTG+TGG + Chr4:66818467-66818486 MsG0480021984.01.T01:intron 30.0%
!!! ACTGTATTCCTGTTTTTAGA+AGG - Chr4:66820185-66820204 None:intergenic 30.0%
!!! CAAATGTTCTTTTTTGTCTG+GGG + Chr4:66816448-66816467 MsG0480021984.01.T01:intron 30.0%
AAATACTAGAGAGAGAGTAG+GGG + Chr4:66818193-66818212 MsG0480021984.01.T01:intron 35.0%
AACACTTGGCATAGGATAAA+GGG + Chr4:66820658-66820677 MsG0480021985.01.T01:intron 35.0%
AATATCATTCTCTGTCTAGG+AGG + Chr4:66817208-66817227 MsG0480021984.01.T01:intron 35.0%
AATATGCACACATGTGTATC+TGG - Chr4:66816555-66816574 None:intergenic 35.0%
AATTTACCGTGACAGCATAA+AGG + Chr4:66820830-66820849 MsG0480021985.01.T01:intron 35.0%
ACCTATAGTAGAAAAGATGG+TGG + Chr4:66818220-66818239 MsG0480021984.01.T01:intron 35.0%
ACCTTCAAGACACAAAAACA+AGG + Chr4:66819651-66819670 MsG0480021985.01.T01:intron 35.0%
ACTCTTACAGGATAAGAAAC+CGG - Chr4:66815311-66815330 None:intergenic 35.0%
ACTCTTACTAGTGATATTGC+TGG + Chr4:66819022-66819041 MsG0480021984.01.T01:CDS 35.0%
ACTGCATATATGAGCAACTA+CGG - Chr4:66816303-66816322 None:intergenic 35.0%
AGAGGGTGGGTATTAAATAA+GGG + Chr4:66821117-66821136 MsG0480021985.01.T01:intron 35.0%
AGATGTATATCGTCTCTTGT+TGG + Chr4:66817891-66817910 MsG0480021984.01.T01:intron 35.0%
AGCACCTATAGTAGAAAAGA+TGG + Chr4:66818217-66818236 MsG0480021984.01.T01:intron 35.0%
AGTATCCCTAATCCAATCAA+TGG - Chr4:66816932-66816951 None:intergenic 35.0%
AGTCTGATATCACACCAATA+AGG - Chr4:66820992-66821011 None:intergenic 35.0%
ATATGCACACATGTGTATCT+GGG - Chr4:66816554-66816573 None:intergenic 35.0%
ATCAAACTTTGCCTTTGCAT+TGG - Chr4:66817042-66817061 None:intergenic 35.0%
ATTACCTCACACACAAAAGT+CGG + Chr4:66819510-66819529 MsG0480021985.01.T01:intron 35.0%
ATTTACCGTGACAGCATAAA+GGG + Chr4:66820831-66820850 MsG0480021985.01.T01:intron 35.0%
CCACAGAAAGACATTAACAA+TGG - Chr4:66820367-66820386 None:intergenic 35.0%
CCATTGTTAATGTCTTTCTG+TGG + Chr4:66820364-66820383 MsG0480021985.01.T01:intron 35.0%
CCTGAGAAAATTATGGAAAG+TGG - Chr4:66819416-66819435 None:intergenic 35.0%
CGCATATGGTATAAATCACA+TGG + Chr4:66821344-66821363 MsG0480021985.01.T01:exon 35.0%
CGGGAAGAATGTAATTGTTA+AGG - Chr4:66816961-66816980 None:intergenic 35.0%
CTCTATTTGATCTACTCTAC+AGG - Chr4:66818284-66818303 None:intergenic 35.0%
CTCTTACTAGTGATATTGCT+GGG + Chr4:66819023-66819042 MsG0480021984.01.T01:CDS 35.0%
CTGTAGAGTAGATCAAATAG+AGG + Chr4:66818282-66818301 MsG0480021984.01.T01:intron 35.0%
GAAACTGTCTCAGAATACAT+CGG - Chr4:66816623-66816642 None:intergenic 35.0%
GAAGACCTAGAGAAACTATT+AGG + Chr4:66818329-66818348 MsG0480021984.01.T01:intron 35.0%
GAGAAACTAACTTTCTTGTC+TGG - Chr4:66818863-66818882 None:intergenic 35.0%
GAGAATTTACGGGAGAATAT+TGG + Chr4:66819232-66819251 MsG0480021984.01.T01:CDS 35.0%
GCTCATATATGCAGTCAATA+AGG + Chr4:66816308-66816327 MsG0480021984.01.T01:intron 35.0%
GGCTTAATCAACAAAGGAAA+AGG - Chr4:66815462-66815481 None:intergenic 35.0%
GGTATAAATCACATGGATAC+GGG + Chr4:66821351-66821370 MsG0480021985.01.T01:exon 35.0%
GTAAATACTAGAGAGAGAGT+AGG + Chr4:66818191-66818210 MsG0480021984.01.T01:intron 35.0%
GTGCTTACAATAATATCCAC+AGG + Chr4:66819195-66819214 MsG0480021984.01.T01:intron 35.0%
GTGGTAAGACTATATGTGAT+AGG + Chr4:66818159-66818178 MsG0480021984.01.T01:intron 35.0%
GTGTACATATACAGAATCAG+AGG - Chr4:66816532-66816551 None:intergenic 35.0%
GTTGAAGCACATGTAAGATT+GGG + Chr4:66817068-66817087 MsG0480021984.01.T01:CDS 35.0%
GTTGATTAAGCCTAAGCAAA+AGG + Chr4:66815470-66815489 MsG0480021984.01.T01:intron 35.0%
TAAGGGAAGAAGTGAAGAAA+AGG + Chr4:66821134-66821153 MsG0480021985.01.T01:intron 35.0%
TACAAAAGGCCAAAACATAC+TGG - Chr4:66820415-66820434 None:intergenic 35.0%
TACAGAATCAGAGGAAAAAC+AGG - Chr4:66816523-66816542 None:intergenic 35.0%
TCTAACTATCCATATCTTCC+AGG + Chr4:66817680-66817699 MsG0480021984.01.T01:intron 35.0%
TCTGTGGAGGATAATAATTG+GGG + Chr4:66820380-66820399 MsG0480021985.01.T01:intron 35.0%
TGAATGAAAGCTATGAAGCA+CGG - Chr4:66815690-66815709 None:intergenic 35.0%
TGCTTAGGCTTAATCAACAA+AGG - Chr4:66815468-66815487 None:intergenic 35.0%
TGCTTCTCATATTAGTGCTT+AGG + Chr4:66815886-66815905 MsG0480021984.01.T01:intron 35.0%
TGGAACATTACAGGTAAAAC+GGG - Chr4:66816980-66816999 None:intergenic 35.0%
TGGCAATAAGTACTAGTTGT+AGG - Chr4:66817154-66817173 None:intergenic 35.0%
TGTTGAAGCACATGTAAGAT+TGG + Chr4:66817067-66817086 MsG0480021984.01.T01:CDS 35.0%
TGTTGCAAATGAGCTGAAAT+GGG + Chr4:66815752-66815771 MsG0480021984.01.T01:intron 35.0%
TTACTTTCTTGGCATGAACA+GGG - Chr4:66818603-66818622 None:intergenic 35.0%
TTGTTAATGTCTTTCTGTGG+AGG + Chr4:66820367-66820386 MsG0480021985.01.T01:intron 35.0%
TTGTTGCAAATGAGCTGAAA+TGG + Chr4:66815751-66815770 MsG0480021984.01.T01:intron 35.0%
TTTACTTTCTTGGCATGAAC+AGG - Chr4:66818604-66818623 None:intergenic 35.0%
! AGGGACAACAGATATTTTAC+GGG + Chr4:66816328-66816347 MsG0480021984.01.T01:intron 35.0%
! AGGTTTCCGATTTTCATTTG+AGG + Chr4:66820703-66820722 MsG0480021985.01.T01:intron 35.0%
! ATCTTTTTCTCCAAGGAGTA+TGG - Chr4:66819342-66819361 None:intergenic 35.0%
! CCACTTTCCATAATTTTCTC+AGG + Chr4:66819413-66819432 MsG0480021985.01.T01:intron 35.0%
! CTTATAGTTATCTGCTGCTT+TGG - Chr4:66821320-66821339 None:intergenic 35.0%
! GATAACGACTGTATTGATAC+AGG - Chr4:66821298-66821317 None:intergenic 35.0%
! GGGTTACATGATATAATGGA+AGG + Chr4:66820683-66820702 MsG0480021985.01.T01:intron 35.0%
! GTATTGATACAGGTATACCT+GGG - Chr4:66821288-66821307 None:intergenic 35.0%
! TCCACCATCTTTTCTACTAT+AGG - Chr4:66818224-66818243 None:intergenic 35.0%
! TGGTTCCATTGATTGGATTA+GGG + Chr4:66816924-66816943 MsG0480021984.01.T01:intron 35.0%
! TGTAAGGTTTGTTCTGTGAT+AGG + Chr4:66821447-66821466 MsG0480021985.01.T01:exon 35.0%
! TGTATTGATACAGGTATACC+TGG - Chr4:66821289-66821308 None:intergenic 35.0%
! TTGGTTCCATTGATTGGATT+AGG + Chr4:66816923-66816942 MsG0480021984.01.T01:intron 35.0%
! TTTGTATGGAACAGAGTGTT+GGG + Chr4:66818074-66818093 MsG0480021984.01.T01:intron 35.0%
! TTTTCATCAACACTTGGCAT+AGG + Chr4:66820650-66820669 MsG0480021985.01.T01:intron 35.0%
!! AATGATGATTTGGTATGCTG+AGG + Chr4:66819886-66819905 MsG0480021985.01.T01:intron 35.0%
!! ACCACTGATTTACTAACGTT+TGG + Chr4:66820602-66820621 MsG0480021985.01.T01:intron 35.0%
!! AGTAAGCATTGGAACATTAC+AGG - Chr4:66816989-66817008 None:intergenic 35.0%
!! AGTTTTAACAAGGAGATCCA+TGG + Chr4:66820558-66820577 MsG0480021985.01.T01:intron 35.0%
!! TCTTTTTCTCCAAGGAGTAT+GGG - Chr4:66819341-66819360 None:intergenic 35.0%
!! TTTCTTTTCAGGAAGGTTTG+CGG - Chr4:66816368-66816387 None:intergenic 35.0%
!! TTTTAGAAGGAAGTAGGGAT+GGG - Chr4:66820172-66820191 None:intergenic 35.0%
!! TTTTTAGAAGGAAGTAGGGA+TGG - Chr4:66820173-66820192 None:intergenic 35.0%
!!! CCTGTTTTTAGAAGGAAGTA+GGG - Chr4:66820177-66820196 None:intergenic 35.0%
!!! TCCTGTTTTTAGAAGGAAGT+AGG - Chr4:66820178-66820197 None:intergenic 35.0%
AACATAAGGTGGCTCCTTAT+TGG + Chr4:66820975-66820994 MsG0480021985.01.T01:intron 40.0%
AATGAAAGCTATGAAGCACG+GGG - Chr4:66815688-66815707 None:intergenic 40.0%
ACAGAGCAAACAGAGCAAAA+TGG - Chr4:66818018-66818037 None:intergenic 40.0%
ATATCAGACTCGTGCTCTAA+TGG + Chr4:66821002-66821021 MsG0480021985.01.T01:intron 40.0%
ATGCTAGCACACGACATATA+TGG - Chr4:66816599-66816618 None:intergenic 40.0%
CAACACTTGGCATAGGATAA+AGG + Chr4:66820657-66820676 MsG0480021985.01.T01:intron 40.0%
CAAGATACCTTTCCAAGATG+TGG - Chr4:66818728-66818747 None:intergenic 40.0%
CAGTTGAAAGAGCTAAGACA+GGG + Chr4:66819046-66819065 MsG0480021984.01.T01:CDS 40.0%
CTACTCTTCTTTAAACCAGC+AGG - Chr4:66819289-66819308 None:intergenic 40.0%
GAAGAAGAGAAGGATCTGAA+GGG - Chr4:66815062-66815081 None:intergenic 40.0%
GAAGTTAACGGTTTCAACAC+TGG + Chr4:66817561-66817580 MsG0480021984.01.T01:intron 40.0%
GAATGAAAGCTATGAAGCAC+GGG - Chr4:66815689-66815708 None:intergenic 40.0%
GAGAGGGTGGGTATTAAATA+AGG + Chr4:66821116-66821135 MsG0480021985.01.T01:intron 40.0%
GAGATCCATGGTTAAACATC+TGG + Chr4:66820570-66820589 MsG0480021985.01.T01:intron 40.0%
GCCAAACGTTAGTAAATCAG+TGG - Chr4:66820606-66820625 None:intergenic 40.0%
GCTTCACTCAAATCAAAGAG+AGG - Chr4:66815504-66815523 None:intergenic 40.0%
GGGTCGCATTGAGTTTAAAA+TGG + Chr4:66819066-66819085 MsG0480021984.01.T01:CDS 40.0%
GGTGGGGTTACATGATATAA+TGG + Chr4:66820679-66820698 MsG0480021985.01.T01:intron 40.0%
GGTTTCTTATCCTGTAAGAG+TGG + Chr4:66815310-66815329 MsG0480021984.01.T01:intron 40.0%
GTGATTGCACTAGAAAGAGA+GGG + Chr4:66821100-66821119 MsG0480021985.01.T01:intron 40.0%
GTGCGACCTCAAATGAAAAT+CGG - Chr4:66820712-66820731 None:intergenic 40.0%
GTTTGTATGGAACAGAGTGT+TGG + Chr4:66818073-66818092 MsG0480021984.01.T01:intron 40.0%
TATCCATAAAATGTGCGACC+TGG + Chr4:66820806-66820825 MsG0480021985.01.T01:intron 40.0%
TATGGAAGCCTAATGCTACA+TGG + Chr4:66819602-66819621 MsG0480021985.01.T01:intron 40.0%
TATTCTTCAGGCCAATGCAA+AGG + Chr4:66817028-66817047 MsG0480021984.01.T01:intron 40.0%
TCAATGTAATCGCATGCGTT+CGG - Chr4:66815616-66815635 None:intergenic 40.0%
TCACTCAAATCAAAGAGAGG+AGG - Chr4:66815501-66815520 None:intergenic 40.0%
TCTTCTTTGTAGCTTACCTG+TGG - Chr4:66819214-66819233 None:intergenic 40.0%
TGAGAGGAGGAAAATTGAGT+CGG + Chr4:66815381-66815400 MsG0480021984.01.T01:intron 40.0%
TGGTGGTAAAGAGCTTATTG+AGG + Chr4:66817773-66817792 MsG0480021984.01.T01:CDS 40.0%
TGGTTCCAGATGTTTAACCA+TGG - Chr4:66820578-66820597 None:intergenic 40.0%
TGTCCAGCTTCTAAATATGC+CGG + Chr4:66819948-66819967 MsG0480021985.01.T01:intron 40.0%
TGTGATTGCACTAGAAAGAG+AGG + Chr4:66821099-66821118 MsG0480021985.01.T01:intron 40.0%
TTGGAAGAGAGGGTTTGATT+CGG - Chr4:66815087-66815106 None:intergenic 40.0%
TTTACCGTGACAGCATAAAG+GGG + Chr4:66820832-66820851 MsG0480021985.01.T01:intron 40.0%
! AAAAGTGCACTTGAGTGCAA+TGG - Chr4:66820871-66820890 None:intergenic 40.0%
! AAGGTTTGTTCTGTGATAGG+TGG + Chr4:66821450-66821469 MsG0480021985.01.T01:exon 40.0%
! ATGTCATCGATCAGAAGTGT+CGG - Chr4:66815579-66815598 None:intergenic 40.0%
! CCCTACTTCCTTCTAAAAAC+AGG + Chr4:66820174-66820193 MsG0480021985.01.T01:intron 40.0%
! TCAATTTTGCATGTGGGAGT+TGG + Chr4:66819097-66819116 MsG0480021984.01.T01:CDS 40.0%
! TTATCCGACTTTTGTGTGTG+AGG - Chr4:66819517-66819536 None:intergenic 40.0%
!! ATAAGAAACCGGAGTATCGA+CGG - Chr4:66815300-66815319 None:intergenic 40.0%
!! CTTTTTCTCCAAGGAGTATG+GGG - Chr4:66819340-66819359 None:intergenic 40.0%
!! TTCTTTTCAGGAAGGTTTGC+GGG - Chr4:66816367-66816386 None:intergenic 40.0%
!! TTTTTCTCCAAGGAGTATGG+GGG - Chr4:66819339-66819358 None:intergenic 40.0%
!!! GCCTTGTTTTTGTGTCTTGA+AGG - Chr4:66819655-66819674 None:intergenic 40.0%
!!! GTTTTTTGGAGTGTGAAACG+AGG + Chr4:66820296-66820315 MsG0480021985.01.T01:intron 40.0%
!!! TATTCACGGGGAGAGTTTTT+TGG + Chr4:66820282-66820301 MsG0480021985.01.T01:intron 40.0%
AAAATAGGCGCAGGTGGTTT+GGG + Chr4:66818243-66818262 MsG0480021984.01.T01:intron 45.0%
AAACAAGGCCCATAACTCCT+AGG + Chr4:66819666-66819685 MsG0480021985.01.T01:intron 45.0%
AATGGCACCACATCTTGGAA+AGG + Chr4:66818718-66818737 MsG0480021984.01.T01:CDS 45.0%
ACAGGGTAGGTAACTTGAGA+TGG - Chr4:66817276-66817295 None:intergenic 45.0%
ACCACCAACTATATCAGCTC+CGG - Chr4:66817760-66817779 None:intergenic 45.0%
ACTTCAAGTGTCCCTCAACA+GGG + Chr4:66818529-66818548 MsG0480021984.01.T01:intron 45.0%
ACTTGGCATAGGATAAAGGG+TGG + Chr4:66820661-66820680 MsG0480021985.01.T01:intron 45.0%
AGAAAGGGGAGAGTGGAAAT+TGG - Chr4:66815036-66815055 None:intergenic 45.0%
AGCCTGGGTTTATGATACCT+AGG - Chr4:66819686-66819705 None:intergenic 45.0%
AGCTTACCGTGCTGCATATA+TGG - Chr4:66819989-66820008 None:intergenic 45.0%
AGGATCTGAAGGGATGAGAA+AGG - Chr4:66815052-66815071 None:intergenic 45.0%
ATTGCACTAGAAAGAGAGGG+TGG + Chr4:66821103-66821122 MsG0480021985.01.T01:intron 45.0%
CAAGCTTATCCCACTAAGTG+AGG - Chr4:66818431-66818450 None:intergenic 45.0%
CAGGGTAGGTAACTTGAGAT+GGG - Chr4:66817275-66817294 None:intergenic 45.0%
CTCACTTAGTGGGATAAGCT+TGG + Chr4:66818429-66818448 MsG0480021984.01.T01:intron 45.0%
CTCCTAGGTATCATAAACCC+AGG + Chr4:66819681-66819700 MsG0480021985.01.T01:intron 45.0%
CTTATCCCACTAAGTGAGGT+CGG - Chr4:66818427-66818446 None:intergenic 45.0%
CTTGGCATAGGATAAAGGGT+GGG + Chr4:66820662-66820681 MsG0480021985.01.T01:intron 45.0%
GAGAATGTTGTGTGGATGTG+TGG + Chr4:66818140-66818159 MsG0480021984.01.T01:intron 45.0%
GATCTGAAGGGATGAGAAAG+GGG - Chr4:66815050-66815069 None:intergenic 45.0%
GCAGTTGAAAGAGCTAAGAC+AGG + Chr4:66819045-66819064 MsG0480021984.01.T01:CDS 45.0%
GCGAACATGAGAATGTTGTG+TGG + Chr4:66818132-66818151 MsG0480021984.01.T01:intron 45.0%
GGAAGAAGAGAAGGATCTGA+AGG - Chr4:66815063-66815082 None:intergenic 45.0%
GGATCTGAAGGGATGAGAAA+GGG - Chr4:66815051-66815070 None:intergenic 45.0%
GTCCAGCTTCTAAATATGCC+GGG + Chr4:66819949-66819968 MsG0480021985.01.T01:intron 45.0%
GTCTGTCCATATATGCAGCA+CGG + Chr4:66819980-66819999 MsG0480021985.01.T01:CDS 45.0%
GTGGAAATTGGAAGGGTTGT+TGG - Chr4:66815024-66815043 None:intergenic 45.0%
TAAATCACATGGATACGGGC+AGG + Chr4:66821355-66821374 MsG0480021985.01.T01:exon 45.0%
TACCCGGCATATTTAGAAGC+TGG - Chr4:66819954-66819973 None:intergenic 45.0%
TGAAGCCATTCGCCAAGTTA+AGG + Chr4:66815518-66815537 MsG0480021984.01.T01:intron 45.0%
TTAACGGTTTCAACACTGGC+AGG + Chr4:66817565-66817584 MsG0480021984.01.T01:intron 45.0%
TTGATGCAATGGAGACTGAG+AGG + Chr4:66815365-66815384 MsG0480021984.01.T01:intron 45.0%
TTGCACTAGAAAGAGAGGGT+GGG + Chr4:66821104-66821123 MsG0480021985.01.T01:intron 45.0%
TTGGCATAGGATAAAGGGTG+GGG + Chr4:66820663-66820682 MsG0480021985.01.T01:intron 45.0%
TTGTGAGAGAGAGAGAGAGA+GGG - Chr4:66814933-66814952 None:intergenic 45.0%
TTTGCATGTGGGAGTTGGAA+AGG + Chr4:66819102-66819121 MsG0480021984.01.T01:CDS 45.0%
! AAGGGTTGTTGGTGAAACAG+TGG - Chr4:66815013-66815032 None:intergenic 45.0%
! AGAGAGAGAGAGAGGGTTTT+TGG - Chr4:66814926-66814945 None:intergenic 45.0%
! AGAGAGAGAGAGGGTTTTTG+GGG - Chr4:66814924-66814943 None:intergenic 45.0%
! CATGTATGCGCTCTAGACAA+AGG - Chr4:66820781-66820800 None:intergenic 45.0%
! CTACAGGTGCAAGAGTGTAT+TGG - Chr4:66816711-66816730 None:intergenic 45.0%
! GAGAGAGAGAGAGGGTTTTT+GGG - Chr4:66814925-66814944 None:intergenic 45.0%
! GCTAACCTTAACTTGGCGAA+TGG - Chr4:66815526-66815545 None:intergenic 45.0%
! GGAGGTTTCTCCTTTTGCTT+AGG - Chr4:66815483-66815502 None:intergenic 45.0%
! TGATTCGGAGGAAGAAGAGA+AGG - Chr4:66815072-66815091 None:intergenic 45.0%
! TTGCCAGGTCGCACATTTTA+TGG - Chr4:66820812-66820831 None:intergenic 45.0%
!! GAAACGGGTTGGATTGGAAT+GGG - Chr4:66815113-66815132 None:intergenic 45.0%
!! GAATGGGTTGTTGGAAGAGA+GGG - Chr4:66815097-66815116 None:intergenic 45.0%
!! GTTGGATTGGAATGGGTTGT+TGG - Chr4:66815106-66815125 None:intergenic 45.0%
!!! ACTGTGGCTGTTTTTGCAGA+AGG + Chr4:66817708-66817727 MsG0480021984.01.T01:CDS 45.0%
!!! CTGTGGCTGTTTTTGCAGAA+GGG + Chr4:66817709-66817728 MsG0480021984.01.T01:CDS 45.0%
!!! TGTGGCTGTTTTTGCAGAAG+GGG + Chr4:66817710-66817729 MsG0480021984.01.T01:CDS 45.0%
AAACCTCACAGCCCTGTTGA+GGG - Chr4:66818543-66818562 None:intergenic 50.0%
AAGCACGGGGACACAAACAA+AGG - Chr4:66815675-66815694 None:intergenic 50.0%
ACATACCAGCTCTGTTCGCT+TGG - Chr4:66817102-66817121 None:intergenic 50.0%
ACTAAGTGAGGTCGGCTACA+TGG - Chr4:66818419-66818438 None:intergenic 50.0%
AGGGGAGAGTGGAAATTGGA+AGG - Chr4:66815032-66815051 None:intergenic 50.0%
AGGTTTGACGGGGTAGGAAA+CGG - Chr4:66815129-66815148 None:intergenic 50.0%
ATCCCTGGTGCTTTATCGTC+GGG - Chr4:66815344-66815363 None:intergenic 50.0%
ATGCAATGGAGACTGAGAGG+AGG + Chr4:66815368-66815387 MsG0480021984.01.T01:intron 50.0%
ATGTAGCCGACCTCACTTAG+TGG + Chr4:66818418-66818437 MsG0480021984.01.T01:intron 50.0%
ATTGTCTCAACCACGCAGCT+CGG + Chr4:66820510-66820529 MsG0480021985.01.T01:intron 50.0%
CACCAGGGATGTTGATGCAA+TGG + Chr4:66815354-66815373 MsG0480021984.01.T01:intron 50.0%
CACTCTCACTGTGACTGCAA+TGG + Chr4:66814953-66814972 MsG0480021984.01.T01:intron 50.0%
CACTTCAAGTGTCCCTCAAC+AGG + Chr4:66818528-66818547 MsG0480021984.01.T01:intron 50.0%
CAGGGCTGTGAGGTTTAACT+TGG + Chr4:66818547-66818566 MsG0480021984.01.T01:intron 50.0%
CAGTGACAGCCTGGAAGATA+TGG - Chr4:66817692-66817711 None:intergenic 50.0%
CATCCCTGGTGCTTTATCGT+CGG - Chr4:66815345-66815364 None:intergenic 50.0%
CTCCATTGCATCAACATCCC+TGG - Chr4:66815359-66815378 None:intergenic 50.0%
CTCTCCCCTTTATGCTGTCA+CGG - Chr4:66820839-66820858 None:intergenic 50.0%
GAAAATAGGCGCAGGTGGTT+TGG + Chr4:66818242-66818261 MsG0480021984.01.T01:intron 50.0%
GAGGAGGAAAATTGAGTCGG+AGG + Chr4:66815384-66815403 MsG0480021984.01.T01:intron 50.0%
GAGGATAGTCAGATCCCTAG+AGG + Chr4:66818301-66818320 MsG0480021984.01.T01:intron 50.0%
GCATCAGTCTGCGCTTTCTA+AGG - Chr4:66818841-66818860 None:intergenic 50.0%
GGGGAGAGTGGAAATTGGAA+GGG - Chr4:66815031-66815050 None:intergenic 50.0%
GGTACTGTGATTCTGCCTCA+TGG + Chr4:66817596-66817615 MsG0480021984.01.T01:CDS 50.0%
GTATTGCAAGCAAAGCCTGC+TGG + Chr4:66819271-66819290 MsG0480021984.01.T01:CDS 50.0%
GTTGTGAGAGAGAGAGAGAG+AGG - Chr4:66814934-66814953 None:intergenic 50.0%
TAAACCTCACAGCCCTGTTG+AGG - Chr4:66818544-66818563 None:intergenic 50.0%
TAGGTCTTCCTCTGCCTCTA+GGG - Chr4:66818318-66818337 None:intergenic 50.0%
TATCTTCCAGGCTGTCACTG+TGG + Chr4:66817692-66817711 MsG0480021984.01.T01:intron 50.0%
TGACAGCATAAAGGGGAGAG+AGG + Chr4:66820839-66820858 MsG0480021985.01.T01:intron 50.0%
TGATTCCAAGCGAACAGAGC+TGG + Chr4:66817094-66817113 MsG0480021984.01.T01:CDS 50.0%
TGCTGTCACGGTAAATTGCC+AGG - Chr4:66820827-66820846 None:intergenic 50.0%
TGTAGCCGACCTCACTTAGT+GGG + Chr4:66818419-66818438 MsG0480021984.01.T01:intron 50.0%
TTGGAGGAAGGTTGGGATTC+AGG - Chr4:66815173-66815192 None:intergenic 50.0%
! GAAGGTTGGGATTCAGGTTC+AGG - Chr4:66815167-66815186 None:intergenic 50.0%
! GTATTGATGCAGATTGGCCC+AGG + Chr4:66821268-66821287 MsG0480021985.01.T01:intron 50.0%
! TTCCCGACGATAAAGCACCA+GGG + Chr4:66815339-66815358 MsG0480021984.01.T01:intron 50.0%
!! AGAGAGAGAGGGTTTTTGGG+GGG - Chr4:66814922-66814941 None:intergenic 50.0%
!! AGATGGTGGAAAATAGGCGC+AGG + Chr4:66818234-66818253 MsG0480021984.01.T01:intron 50.0%
!! GAAGAGAGGGTTTGATTCGG+AGG - Chr4:66815084-66815103 None:intergenic 50.0%
!! GAGAGAGAGAGGGTTTTTGG+GGG - Chr4:66814923-66814942 None:intergenic 50.0%
!! GGAAACGGGTTGGATTGGAA+TGG - Chr4:66815114-66815133 None:intergenic 50.0%
!! GGAATGGGTTGTTGGAAGAG+AGG - Chr4:66815098-66815117 None:intergenic 50.0%
!! GTATGGAACAGAGTGTTGGG+TGG + Chr4:66818077-66818096 MsG0480021984.01.T01:intron 50.0%
!! GTTACCTTAGGAGCACCATG+AGG - Chr4:66817614-66817633 None:intergenic 50.0%
!! TGTTTTTGCAGAAGGGGCAG+AGG + Chr4:66817716-66817735 MsG0480021984.01.T01:CDS 50.0%
!! TTGAGCGTTGGAGGAAGGTT+GGG - Chr4:66815180-66815199 None:intergenic 50.0%
AAACAGCCACAGTGACAGCC+TGG - Chr4:66817701-66817720 None:intergenic 55.0%
AAGGAAGTAGGGATGGGCGA+GGG - Chr4:66820166-66820185 None:intergenic 55.0%
ACGCGTGGTTGTTCGGGATT+GGG - Chr4:66815236-66815255 None:intergenic 55.0%
AGGCGGGTCTTGAGGTTTGA+CGG - Chr4:66815141-66815160 None:intergenic 55.0%
AGGGATGAGAAAGGGGAGAG+TGG - Chr4:66815043-66815062 None:intergenic 55.0%
AGTCAGATCCCTAGAGGCAG+AGG + Chr4:66818307-66818326 MsG0480021984.01.T01:intron 55.0%
ATGGACAGACAGCACGTACC+CGG - Chr4:66819970-66819989 None:intergenic 55.0%
CCTGGAATGGCACCACATCT+TGG + Chr4:66818713-66818732 MsG0480021984.01.T01:CDS 55.0%
CTAGGTCTTCCTCTGCCTCT+AGG - Chr4:66818319-66818338 None:intergenic 55.0%
GACAAGTGCTTCTCCACTCC+TGG + Chr4:66818695-66818714 MsG0480021984.01.T01:CDS 55.0%
GCAGAGGAAGCAAAAGCTGC+CGG + Chr4:66817738-66817757 MsG0480021984.01.T01:CDS 55.0%
GCCGGAGCTGATATAGTTGG+TGG + Chr4:66817756-66817775 MsG0480021984.01.T01:CDS 55.0%
GCTGCCGGAGCTGATATAGT+TGG + Chr4:66817753-66817772 MsG0480021984.01.T01:CDS 55.0%
GGTGCTTTATCGTCGGGAAG+TGG - Chr4:66815338-66815357 None:intergenic 55.0%
GGTTTGACGGGGTAGGAAAC+GGG - Chr4:66815128-66815147 None:intergenic 55.0%
GTCTTGAGGTTTGACGGGGT+AGG - Chr4:66815135-66815154 None:intergenic 55.0%
GTGCTTCTCCACTCCTGGAA+TGG + Chr4:66818700-66818719 MsG0480021984.01.T01:CDS 55.0%
TCTGCCTCATGGTGCTCCTA+AGG + Chr4:66817607-66817626 MsG0480021984.01.T01:CDS 55.0%
TGGTGGAAAATAGGCGCAGG+TGG + Chr4:66818237-66818256 MsG0480021984.01.T01:intron 55.0%
TTGAGTCGGAGGATCAGCTG+AGG + Chr4:66815395-66815414 MsG0480021984.01.T01:intron 55.0%
! ATTCAGGTTCAGGTGGAGGC+GGG - Chr4:66815157-66815176 None:intergenic 55.0%
! CTTCCCGACGATAAAGCACC+AGG + Chr4:66815338-66815357 MsG0480021984.01.T01:intron 55.0%
! GATTCAGGTTCAGGTGGAGG+CGG - Chr4:66815158-66815177 None:intergenic 55.0%
! GGTTGGGATTCAGGTTCAGG+TGG - Chr4:66815164-66815183 None:intergenic 55.0%
! TCTCCAAGGAGTATGGGGGA+GGG - Chr4:66819335-66819354 None:intergenic 55.0%
! TGGGATTCAGGTTCAGGTGG+AGG - Chr4:66815161-66815180 None:intergenic 55.0%
! TTCTCCAAGGAGTATGGGGG+AGG - Chr4:66819336-66819355 None:intergenic 55.0%
!! AGAAACCGGAGTATCGACGG+AGG - Chr4:66815297-66815316 None:intergenic 55.0%
!! ATGTGGTGCCATTCCAGGAG+TGG - Chr4:66818711-66818730 None:intergenic 55.0%
!! CCAAGATGTGGTGCCATTCC+AGG - Chr4:66818716-66818735 None:intergenic 55.0%
!! GGGTAGGAAACGGGTTGGAT+TGG - Chr4:66815119-66815138 None:intergenic 55.0%
!! GTTGAGCGTTGGAGGAAGGT+TGG - Chr4:66815181-66815200 None:intergenic 55.0%
AGGAAGTAGGGATGGGCGAG+GGG - Chr4:66820165-66820184 None:intergenic 60.0%
AGTGGCGACGAGCTTGAGAG+AGG - Chr4:66814995-66815014 None:intergenic 60.0%
ATCCCGAACAACCACGCGTC+TGG + Chr4:66815237-66815256 MsG0480021984.01.T01:intron 60.0%
CAACACTGGCAGGCAGTTCG+TGG + Chr4:66817575-66817594 MsG0480021984.01.T01:intron 60.0%
CGCGTGGTTGTTCGGGATTG+GGG - Chr4:66815235-66815254 None:intergenic 60.0%
CGTCCAGACGCGTGGTTGTT+CGG - Chr4:66815243-66815262 None:intergenic 60.0%
GAAGGAAGTAGGGATGGGCG+AGG - Chr4:66820167-66820186 None:intergenic 60.0%
GACGCGTGGTTGTTCGGGAT+TGG - Chr4:66815237-66815256 None:intergenic 60.0%
GCGGGTCTTGAGGTTTGACG+GGG - Chr4:66815139-66815158 None:intergenic 60.0%
GCGTGGTTGTTCGGGATTGG+GGG - Chr4:66815234-66815253 None:intergenic 60.0%
GGAAGTGGCGCCACTCTTAC+AGG - Chr4:66815323-66815342 None:intergenic 60.0%
GGCGGGTCTTGAGGTTTGAC+GGG - Chr4:66815140-66815159 None:intergenic 60.0%
GTCCAGACGCGTGGTTGTTC+GGG - Chr4:66815242-66815261 None:intergenic 60.0%
GTCTCAGAAGCCTGAGGAGG+CGG - Chr4:66815212-66815231 None:intergenic 60.0%
TCCGTCCTCCGTCGATACTC+CGG + Chr4:66815289-66815308 MsG0480021984.01.T01:intron 60.0%
TGACGGGGTAGGAAACGGGT+TGG - Chr4:66815124-66815143 None:intergenic 60.0%
TGTCCCTCAACAGGGCTGTG+AGG + Chr4:66818537-66818556 MsG0480021984.01.T01:intron 60.0%
TTGGGGGTCTCAGAAGCCTG+AGG - Chr4:66815218-66815237 None:intergenic 60.0%
! CTCCAAGGAGTATGGGGGAG+GGG - Chr4:66819334-66819353 None:intergenic 60.0%
! TCCAAGGAGTATGGGGGAGG+GGG - Chr4:66819333-66819352 None:intergenic 60.0%
!! ACCGGAGTATCGACGGAGGA+CGG - Chr4:66815293-66815312 None:intergenic 60.0%
!! GGAGGTTGAGCGTTGGAGGA+AGG - Chr4:66815185-66815204 None:intergenic 60.0%
AGAAGCCTGAGGAGGCGGTG+GGG - Chr4:66815207-66815226 None:intergenic 65.0%
CAGAAGCCTGAGGAGGCGGT+GGG - Chr4:66815208-66815227 None:intergenic 65.0%
CAGCTCGGCTGATGAGCCGA+GGG + Chr4:66820525-66820544 MsG0480021985.01.T01:intron 65.0%
CGGGCAGGCTTTCAGCGTGA+AGG + Chr4:66821370-66821389 MsG0480021985.01.T01:exon 65.0%
GGGGTCTCAGAAGCCTGAGG+AGG - Chr4:66815215-66815234 None:intergenic 65.0%
TCAGAAGCCTGAGGAGGCGG+TGG - Chr4:66815209-66815228 None:intergenic 65.0%
TCAGGTGGAGGCGGGTCTTG+AGG - Chr4:66815149-66815168 None:intergenic 65.0%
TGCAGAAGGGGCAGAGGCAG+AGG + Chr4:66817722-66817741 MsG0480021984.01.T01:CDS 65.0%
! CCAAGGAGTATGGGGGAGGG+GGG - Chr4:66819332-66819351 None:intergenic 65.0%
!! TGGGGGAGGTTGAGCGTTGG+AGG - Chr4:66815189-66815208 None:intergenic 65.0%
CCCCCCTCCCCCATACTCCT+TGG + Chr4:66819329-66819348 MsG0480021984.01.T01:CDS 70.0%
CGGTGGGGGAGGTTGAGCGT+TGG - Chr4:66815192-66815211 None:intergenic 70.0%
GAAGCCTGAGGAGGCGGTGG+GGG - Chr4:66815206-66815225 None:intergenic 70.0%
GCAGCTCGGCTGATGAGCCG+AGG + Chr4:66820524-66820543 MsG0480021985.01.T01:intron 70.0%
GGCTCATCAGCCGAGCTGCG+TGG - Chr4:66820523-66820542 None:intergenic 70.0%
ACCACGCGTCTGGACGCGCG+AGG + Chr4:66815247-66815266 MsG0480021984.01.T01:intron 75.0%
ACCTCCCCCACCGCCTCCTC+AGG + Chr4:66815199-66815218 MsG0480021984.01.T01:intron 75.0%
TCCTCGCGCGTCCAGACGCG+TGG - Chr4:66815251-66815270 None:intergenic 75.0%
! GCCTGAGGAGGCGGTGGGGG+AGG - Chr4:66815203-66815222 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
Chr4 gene 66814915 66821493 66814915 ID=MsG0480021985.01;
Chr4 mRNA 66814915 66821493 66814915 ID=MsG0480021985.01.T01;Parent=MsG0480021985.01
Chr4 exon 66814915 66815398 66814915 ID=MsG0480021985.01.T01.exon;Parent=MsG0480021985.01.T01
Chr4 CDS 66814972 66815398 66814972 ID=MsG0480021985.01.T01.cds;Parent=MsG0480021985.01.T01
Chr4 CDS 66815523 66815539 66815523 ID=MsG0480021985.01.T01.cds;Parent=MsG0480021985.01.T01
Chr4 exon 66815523 66815539 66815523 ID=MsG0480021985.01.T01.exon;Parent=MsG0480021985.01.T01
Chr4 CDS 66815750 66815799 66815750 ID=MsG0480021985.01.T01.cds;Parent=MsG0480021985.01.T01
Chr4 exon 66815750 66815799 66815750 ID=MsG0480021985.01.T01.exon;Parent=MsG0480021985.01.T01
Chr4 CDS 66816212 66816222 66816212 ID=MsG0480021985.01.T01.cds;Parent=MsG0480021985.01.T01
Chr4 exon 66816212 66816222 66816212 ID=MsG0480021985.01.T01.exon;Parent=MsG0480021985.01.T01
Chr4 CDS 66816405 66816462 66816405 ID=MsG0480021985.01.T01.cds;Parent=MsG0480021985.01.T01
Chr4 exon 66816405 66816462 66816405 ID=MsG0480021985.01.T01.exon;Parent=MsG0480021985.01.T01
Chr4 CDS 66816775 66816785 66816775 ID=MsG0480021985.01.T01.cds;Parent=MsG0480021985.01.T01
Chr4 exon 66816775 66816785 66816775 ID=MsG0480021985.01.T01.exon;Parent=MsG0480021985.01.T01
Chr4 CDS 66816945 66816979 66816945 ID=MsG0480021985.01.T01.cds;Parent=MsG0480021985.01.T01
Chr4 exon 66816945 66816979 66816945 ID=MsG0480021985.01.T01.exon;Parent=MsG0480021985.01.T01
Chr4 CDS 66817050 66817115 66817050 ID=MsG0480021985.01.T01.cds;Parent=MsG0480021985.01.T01
Chr4 exon 66817050 66817115 66817050 ID=MsG0480021985.01.T01.exon;Parent=MsG0480021985.01.T01
Chr4 CDS 66817587 66817628 66817587 ID=MsG0480021985.01.T01.cds;Parent=MsG0480021985.01.T01
Chr4 exon 66817587 66817628 66817587 ID=MsG0480021985.01.T01.exon;Parent=MsG0480021985.01.T01
Chr4 CDS 66817702 66817804 66817702 ID=MsG0480021985.01.T01.cds;Parent=MsG0480021985.01.T01
Chr4 exon 66817702 66817804 66817702 ID=MsG0480021985.01.T01.exon;Parent=MsG0480021985.01.T01
Chr4 CDS 66818672 66818739 66818672 ID=MsG0480021985.01.T01.cds;Parent=MsG0480021985.01.T01
Chr4 exon 66818672 66818739 66818672 ID=MsG0480021985.01.T01.exon;Parent=MsG0480021985.01.T01
Chr4 CDS 66818827 66818871 66818827 ID=MsG0480021985.01.T01.cds;Parent=MsG0480021985.01.T01
Chr4 exon 66818827 66818871 66818827 ID=MsG0480021985.01.T01.exon;Parent=MsG0480021985.01.T01
Chr4 CDS 66819016 66819123 66819016 ID=MsG0480021985.01.T01.cds;Parent=MsG0480021985.01.T01
Chr4 exon 66819016 66819123 66819016 ID=MsG0480021985.01.T01.exon;Parent=MsG0480021985.01.T01
Chr4 CDS 66819217 66819304 66819217 ID=MsG0480021985.01.T01.cds;Parent=MsG0480021985.01.T01
Chr4 exon 66819217 66819304 66819217 ID=MsG0480021985.01.T01.exon;Parent=MsG0480021985.01.T01
Chr4 CDS 66819955 66820001 66819955 ID=MsG0480021985.01.T01.cds;Parent=MsG0480021985.01.T01
Chr4 exon 66819955 66820001 66819955 ID=MsG0480021985.01.T01.exon;Parent=MsG0480021985.01.T01
Chr4 CDS 66821280 66821357 66821280 ID=MsG0480021985.01.T01.cds;Parent=MsG0480021985.01.T01
Chr4 exon 66821280 66821493 66821280 ID=MsG0480021985.01.T01.exon;Parent=MsG0480021985.01.T01
Gene Sequence

>MsG0480021985.01.T01

ATGGCGTCGCTGAAGCTTCTCCTCTCTCAAGCTCGTCGCCACTGTTTCACCAACAACCCTTCCAATTTCCACTCTCCCCTTTCTCATCCCTTCAGATCCTTCTCTTCTTCCTCCGAATCAAACCCTCTCTTCCAACAACCCATTCCAATCCAACCCGTTTCCTACCCCGTCAAACCTCAAGACCCGCCTCCACCTGAACCTGAATCCCAACCTTCCTCCAACGCTCAACCTCCCCCACCGCCTCCTCAGGCTTCTGAGACCCCCAATCCCGAACAACCACGCGTCTGGACGCGCGAGGATATTCGCTATGTAAAAGCTCCGTCCTCCGTCGATACTCCGGTTTCTTATCCTGTAAGAGTGGCGCCACTTCCCGACGATAAAGCACCAGGGATGTTGATGCAATGGAGACTGAGAGGAGGAAAATTGACCATTCGCCAAGTTAAGATTGTTGCAAATGAGCTGAAATGGGAAATTGTTGTGAAAAAAGGAGTCATCTTTTGCTTTTTTCTAAAAATTGCAGCCAAAATTGTAGATATACGAATGGAAAACAAATGTTCTTTTTTGATAGCTAAAAGGATACTACATATCCTTAACAATTACATTCTTCCCGCAAAGTTTGATGAAACTGTTGAAGCACATGTAAGATTGGGCATTGATTCCAAGCGAACAGAGCTGGCAGTTCGTGGTACTGTGATTCTGCCTCATGGTGCTCCTAAGGCTGTCACTGTGGCTGTTTTTGCAGAAGGGGCAGAGGCAGAGGAAGCAAAAGCTGCCGGAGCTGATATAGTTGGTGGTAAAGAGCTTATTGAGGAGATTGCTAGTGGTAATAATAAGCTCAAAGTTGACAAGTGCTTCTCCACTCCTGGAATGGCACCACATCTTGGAAAGATAGCACAATACCTTAGAAAGCGCAGACTGATGCCAGACAAGAAACTAGGTACTCTTACTAGTGATATTGCTGGGCAGTTGAAAGAGCTAAGACAGGGTCGCATTGAGTTTAAAATGGAAAGTAAATCAATTTTGCATGTGGGAGTTGGAAAGGTAAGCTACAAAGAAGAGAATTTACGGGAGAATATTGGTGCATTTATGAATGCTGTATTGCAAGCAAAGCCTGCTGGTTTAAAGAAGACTTCTAAATATGCCGGGTACGTGCTGTCTGTCCATATATGCAGCACGATTGGCCCAGGTATACCTGTATCAATACAGTCGTTATCCAAAGCAGCAGATAACTATAAGAAAGCGCATATGGTATAA
Protein sequence

>MsG0480021985.01.T01

MASLKLLLSQARRHCFTNNPSNFHSPLSHPFRSFSSSSESNPLFQQPIPIQPVSYPVKPQDPPPPEPESQPSSNAQPPPPPPQASETPNPEQPRVWTREDIRYVKAPSSVDTPVSYPVRVAPLPDDKAPGMLMQWRLRGGKLTIRQVKIVANELKWEIVVKKGVIFCFFLKIAAKIVDIRMENKCSFLIAKRILHILNNYILPAKFDETVEAHVRLGIDSKRTELAVRGTVILPHGAPKAVTVAVFAEGAEAEEAKAAGADIVGGKELIEEIASGNNKLKVDKCFSTPGMAPHLGKIAQYLRKRRLMPDKKLGTLTSDIAGQLKELRQGRIEFKMESKSILHVGVGKVSYKEENLRENIGAFMNAVLQAKPAGLKKTSKYAGYVLSVHICSTIGPGIPVSIQSLSKAADNYKKAHMV*