AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880045836.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880045836.01.T01 MTR_8g079690 91.117 394 1 1 1 394 1 360 0.0 723
MsG0880045836.01.T01 MTR_4g086760 67.595 395 93 2 1 394 1 361 0.0 547
MsG0880045836.01.T01 MTR_4g086760 67.213 366 85 2 1 365 1 332 0.0 506
MsG0880045836.01.T01 MTR_4g086760 74.510 306 77 1 1 305 1 306 2.24e-172 484
MsG0880045836.01.T01 MTR_7g116340 63.429 175 60 3 1 174 1 172 3.63e-70 218
MsG0880045836.01.T01 MTR_7g095750 61.798 178 65 2 3 179 6 181 6.69e-69 229
MsG0880045836.01.T01 MTR_4g075290 61.143 175 64 3 1 174 1 172 8.53e-69 215
MsG0880045836.01.T01 MTR_3g463900 60.355 169 65 2 5 173 35 201 1.13e-63 202
MsG0880045836.01.T01 MTR_3g070500 58.480 171 69 2 5 175 65 233 2.83e-63 202
MsG0880045836.01.T01 MTR_3g117750 57.895 171 70 2 5 175 13 181 7.73e-63 200
MsG0880045836.01.T01 MTR_1g117010 57.558 172 62 2 5 173 78 241 1.69e-60 196
MsG0880045836.01.T01 MTR_1g117010 57.558 172 62 2 5 173 78 241 1.69e-60 196
MsG0880045836.01.T01 MTR_7g110980 55.030 169 68 1 5 173 97 257 6.06e-59 192
MsG0880045836.01.T01 MTR_1g085560 57.647 170 63 2 5 173 86 247 7.19e-59 192
MsG0880045836.01.T01 MTR_4g073650 56.805 169 72 1 5 173 47 214 1.26e-58 190
MsG0880045836.01.T01 MTR_8g040180 55.233 172 73 2 3 173 17 185 2.41e-57 186
MsG0880045836.01.T01 MTR_3g070500 64.228 123 43 1 5 127 65 186 1.72e-49 166
MsG0880045836.01.T01 MTR_3g107660 47.500 200 100 3 3 201 9 204 1.49e-45 168
MsG0880045836.01.T01 MTR_1g011980 50.292 171 81 3 6 175 9 176 8.46e-43 159
MsG0880045836.01.T01 MTR_8g036015 49.664 149 62 3 18 165 10 146 2.38e-39 138
MsG0880045836.01.T01 MTR_2g085075 50.000 154 64 3 18 170 471 612 1.35e-37 144
MsG0880045836.01.T01 MTR_3g070500 62.000 100 37 1 5 104 65 163 1.87e-36 131
MsG0880045836.01.T01 MTR_3g070500 63.542 96 34 1 5 100 65 159 2.27e-36 130
MsG0880045836.01.T01 MTR_7g105220 44.242 165 74 5 4 167 10 157 1.35e-35 128
MsG0880045836.01.T01 MTR_5g015500 40.102 197 83 6 18 213 314 476 1.00e-31 126
MsG0880045836.01.T01 MTR_5g015500 40.102 197 83 6 18 213 354 516 1.27e-31 126
MsG0880045836.01.T01 MTR_2g023120 43.919 148 66 6 18 161 22 156 9.92e-22 97.4
MsG0880045836.01.T01 MTR_3g085705 52.222 90 35 2 64 151 32 115 1.54e-21 89.7
MsG0880045836.01.T01 MTR_6g084140 34.591 159 83 5 18 167 10 156 4.02e-17 83.6
MsG0880045836.01.T01 MTR_6g084140 34.591 159 83 5 18 167 27 173 5.15e-17 83.2
MsG0880045836.01.T01 MTR_8g442420 33.962 159 84 5 18 167 10 156 4.80e-16 80.5
MsG0880045836.01.T01 MTR_1g094065 33.758 157 81 7 17 170 88 224 9.46e-14 70.5
MsG0880045836.01.T01 MTR_1g035360 31.818 154 89 4 17 170 87 224 1.67e-12 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880045836.01.T01 AT2G15790 64.975 394 103 2 1 393 1 360 0.0 526
MsG0880045836.01.T01 AT3G63400 66.667 174 55 2 3 175 6 177 1.29e-74 237
MsG0880045836.01.T01 AT3G63400 66.667 174 55 2 3 175 6 177 1.09e-72 237
MsG0880045836.01.T01 AT3G63400 66.667 174 55 2 3 175 6 177 1.09e-72 237
MsG0880045836.01.T01 AT3G63400 66.667 174 55 2 3 175 6 177 1.09e-72 237
MsG0880045836.01.T01 AT4G34870 62.857 175 61 3 1 174 1 172 1.82e-70 219
MsG0880045836.01.T01 AT2G16600 63.006 173 60 3 3 174 4 173 3.64e-70 218
MsG0880045836.01.T01 AT4G38740 61.714 175 63 3 1 174 1 172 1.21e-69 217
MsG0880045836.01.T01 AT2G21130 61.494 174 63 3 3 175 4 174 2.08e-69 216
MsG0880045836.01.T01 AT3G56070 63.218 174 60 3 1 173 1 171 5.27e-69 216
MsG0880045836.01.T01 AT3G56070 63.218 174 60 3 1 173 1 171 5.27e-69 216
MsG0880045836.01.T01 AT2G29960 59.763 169 66 2 5 173 33 199 1.87e-63 202
MsG0880045836.01.T01 AT2G29960 59.763 169 66 2 5 173 33 199 1.87e-63 202
MsG0880045836.01.T01 AT5G13120 57.386 176 64 2 5 177 91 258 2.12e-63 204
MsG0880045836.01.T01 AT5G13120 57.386 176 64 2 5 177 87 254 2.51e-63 204
MsG0880045836.01.T01 AT3G55920 60.000 170 66 2 5 174 60 227 2.98e-63 202
MsG0880045836.01.T01 AT3G62030 58.580 169 62 1 5 173 95 255 4.78e-62 201
MsG0880045836.01.T01 AT3G62030 58.580 169 62 1 5 173 96 256 5.72e-62 200
MsG0880045836.01.T01 AT3G62030 58.580 169 62 1 5 173 149 309 1.67e-61 201
MsG0880045836.01.T01 AT5G58710 58.580 169 68 2 5 173 36 202 2.97e-60 194
MsG0880045836.01.T01 AT2G38730 56.395 172 71 2 3 173 31 199 4.17e-58 188
MsG0880045836.01.T01 AT2G29960 57.396 169 60 3 5 173 33 189 4.72e-58 188
MsG0880045836.01.T01 AT4G34960 53.846 169 77 1 5 173 48 215 5.39e-57 186
MsG0880045836.01.T01 AT2G16600 55.491 173 51 3 3 174 4 151 1.91e-56 182
MsG0880045836.01.T01 AT4G34960 57.377 122 51 1 5 126 48 168 1.75e-43 149
MsG0880045836.01.T01 AT4G32420 47.953 171 86 2 3 172 6 174 1.52e-42 159
MsG0880045836.01.T01 AT4G32420 47.953 171 86 2 3 172 6 174 1.52e-42 159
MsG0880045836.01.T01 AT4G32420 47.953 171 86 2 3 172 6 174 1.52e-42 159
MsG0880045836.01.T01 AT4G32420 47.953 171 86 2 3 172 6 174 1.52e-42 159
MsG0880045836.01.T01 AT3G22920 46.703 182 85 6 1 179 1 173 7.98e-41 144
MsG0880045836.01.T01 AT4G32420 48.993 149 76 0 3 151 6 154 2.97e-40 152
MsG0880045836.01.T01 AT3G44600 51.299 154 62 3 18 170 485 626 1.04e-38 147
MsG0880045836.01.T01 AT1G01940 48.993 149 63 3 18 165 10 146 3.38e-38 135
MsG0880045836.01.T01 AT2G36130 44.242 165 74 5 4 167 10 157 4.72e-35 127
MsG0880045836.01.T01 AT5G67530 44.156 154 73 4 18 170 353 494 4.34e-32 128
MsG0880045836.01.T01 AT4G33060 43.919 148 66 6 18 161 22 156 1.14e-25 108
MsG0880045836.01.T01 AT1G53720 34.591 159 83 5 18 167 10 156 6.42e-19 87.8
MsG0880045836.01.T01 AT1G53720 34.591 159 83 5 18 167 10 156 2.78e-18 87.0
MsG0880045836.01.T01 AT2G47320 29.801 151 91 4 17 167 86 221 8.58e-11 62.0

Find 121 sgRNAs with CRISPR-Local

Find 303 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCGCAAGGCTTTGCGTTATT+TGG 0.146656 8:+65141196 MsG0880045836.01.T01:CDS
CAGAGAAGAGCACTGCTTTA+AGG 0.171724 8:+65141371 MsG0880045836.01.T01:intron
CAGGCCTGTAAATTAAAATT+AGG 0.205661 8:+65142140 MsG0880045836.01.T01:intron
TCTCTCTGCACCGGCGAAAA+AGG 0.252295 8:+65140259 MsG0880045836.01.T01:CDS
GCTGGTGTGAATTGTTTAAT+AGG 0.306179 8:+65142459 MsG0880045836.01.T01:CDS
GATGGGAAGCATGTGGTGTT+TGG 0.308347 8:+65140538 MsG0880045836.01.T01:CDS
GACGACGAGGACTCCGCATT+TGG 0.329574 8:+65140516 MsG0880045836.01.T01:CDS
AATTAGCCTTGATGCGGATA+TGG 0.331853 8:+65143781 MsG0880045836.01.T01:exon
TGTATTACTGACCTTCTTCC+TGG 0.341120 8:-65143626 None:intergenic
CTGTTGAGCTTGGTCCGGTT+GGG 0.343040 8:+65140593 MsG0880045836.01.T01:CDS
ATGGGAAGCATGTGGTGTTT+GGG 0.357969 8:+65140539 MsG0880045836.01.T01:CDS
GCTCAAAGAGTTTGTCAAAA+TGG 0.375853 8:-65143955 None:intergenic
CTTTGGAAATGAACACTATA+AGG 0.386961 8:+65140798 MsG0880045836.01.T01:CDS
CAGTGGAGCTTTACTTGATT+CGG 0.393358 8:+65142169 MsG0880045836.01.T01:CDS
AATAGTCACCAACCATCATT+TGG 0.395698 8:-65142976 None:intergenic
TTGCTGAAGGGGAGGATGAA+GGG 0.404415 8:+65140665 MsG0880045836.01.T01:CDS
TGAAAGGGATTGGAGTTGTT+AGG 0.404472 8:+65140569 MsG0880045836.01.T01:CDS
GGGAAGGTTGTGAAAGGGAT+TGG 0.404533 8:+65140559 MsG0880045836.01.T01:CDS
GTTGAATCTATCAAGGGCTT+TGG 0.411683 8:+65140781 MsG0880045836.01.T01:CDS
ACCTAAAACACGAACGGAAA+GGG 0.412914 8:+65140437 MsG0880045836.01.T01:CDS
CAATGACCTGGATGCCGCTC+TGG 0.426988 8:+65142924 MsG0880045836.01.T01:CDS
GGTCGATCGTTCTCCCCAAC+CGG 0.427649 8:-65140607 None:intergenic
GCGTTATTTGGACATGTGTT+GGG 0.434614 8:+65141208 MsG0880045836.01.T01:CDS
AACTGACTCCCATTGGTGTT+CGG 0.442751 8:-65140484 None:intergenic
TGCGTTATTTGGACATGTGT+TGG 0.447762 8:+65141207 MsG0880045836.01.T01:CDS
ATCTCCGCCTCCGACGGAAC+CGG 0.449439 8:+65140370 MsG0880045836.01.T01:CDS
ATCCACCATTCAAGCTCCTC+CGG 0.449666 8:-65140751 None:intergenic
ATTGCTGAAGGGGAGGATGA+AGG 0.452826 8:+65140664 MsG0880045836.01.T01:CDS
TCTGTTGAGCTTGGTCCGGT+TGG 0.454918 8:+65140592 MsG0880045836.01.T01:CDS
TCTCTGTTATAGAAAATCAC+TGG 0.460527 8:-65143983 None:intergenic
ATGTTGTGATTGCTGATTGT+GGG 0.460587 8:+65140638 MsG0880045836.01.T01:CDS
GGCTTGGTATCAAGATCAAC+AGG 0.465685 8:-65140730 None:intergenic
GGAAGATGGAGTTCTTGAAA+TGG 0.467050 8:-65140309 None:intergenic
AGCTCTGTTTCGCAAAGGCC+AGG 0.474119 8:+65142223 MsG0880045836.01.T01:CDS
TTTGGACATGTGTTGGGAGA+AGG 0.474985 8:+65141214 MsG0880045836.01.T01:CDS
TGTTGAGCTTGGTCCGGTTG+GGG 0.477465 8:+65140594 MsG0880045836.01.T01:CDS
GTTGTTAGGTCTGTTGAGCT+TGG 0.477926 8:+65140583 MsG0880045836.01.T01:CDS
GAATGCTGTTGAATCTATCA+AGG 0.478392 8:+65140774 MsG0880045836.01.T01:CDS
TCGAAGTACACTCTTGGGTT+CGG 0.485037 8:-65140151 None:intergenic
CTGGTGTGAATTGTTTAATA+GGG 0.486180 8:+65142460 MsG0880045836.01.T01:CDS
CTTATGTCGAAGTACACTCT+TGG 0.486685 8:-65140157 None:intergenic
CCAAGCCGGAGGAGCTTGAA+TGG 0.487486 8:+65140746 MsG0880045836.01.T01:CDS
ATCTTCCACCGTGTCGTCAA+AGG 0.488625 8:+65140325 MsG0880045836.01.T01:CDS
ACGAGGACTCCGCATTTGGA+TGG 0.494223 8:+65140520 MsG0880045836.01.T01:CDS
GGTTGCTGATAGACATGATA+AGG 0.494242 8:+65143732 MsG0880045836.01.T01:intron
AGCTATCCAGAGCGGCATCC+AGG 0.495882 8:-65142930 None:intergenic
TGCTGAAGGGGAGGATGAAG+GGG 0.498218 8:+65140666 MsG0880045836.01.T01:CDS
TGACTCGCCGCCGGTTCCGT+CGG 0.502311 8:-65140380 None:intergenic
GCATACAATATGACTGTATG+AGG 0.503976 8:-65142438 None:intergenic
TTATGTCGAAGTACACTCTT+GGG 0.506372 8:-65140156 None:intergenic
CCATTCAAGCTCCTCCGGCT+TGG 0.508001 8:-65140746 None:intergenic
GGAGAACGATCGACCGGAGC+AGG 0.509782 8:+65140615 MsG0880045836.01.T01:CDS
TTTCGCCGGTGCAGAGAGAT+CGG 0.511855 8:-65140255 None:intergenic
GCCGCCGGTTCCGTCGGAGG+CGG 0.516656 8:-65140374 None:intergenic
ATTGTTTAATAGGGAGGAAA+GGG 0.516703 8:+65142469 MsG0880045836.01.T01:CDS
TTTGACGACACGGTGGAAGA+TGG 0.517502 8:-65140323 None:intergenic
AGGCGGAGATGTCACCGCCT+TGG 0.518147 8:-65140357 None:intergenic
AATTGTTTAATAGGGAGGAA+AGG 0.520493 8:+65142468 MsG0880045836.01.T01:CDS
ATACCGGTCCGAACACCAAT+GGG 0.524056 8:+65140476 MsG0880045836.01.T01:CDS
TTAGAGTTGGAGCCAAATGA+TGG 0.524064 8:+65142964 MsG0880045836.01.T01:CDS
CTTCAAGAGAGCATTAGAGT+TGG 0.526509 8:+65142951 MsG0880045836.01.T01:CDS
AAGCATCGGCGGTGAACTCG+AGG 0.527582 8:+65140177 MsG0880045836.01.T01:CDS
GTGTTTGGGAAGGTTGTGAA+AGG 0.528665 8:+65140553 MsG0880045836.01.T01:CDS
TAGGTCTGTTGAGCTTGGTC+CGG 0.531881 8:+65140588 MsG0880045836.01.T01:CDS
TTGTGGGGAGATTGCTGAAG+GGG 0.543269 8:+65140654 MsG0880045836.01.T01:CDS
CATACAGTCATATTGTATGC+TGG 0.547304 8:+65142441 MsG0880045836.01.T01:CDS
GTGTGAATTGTTTAATAGGG+AGG 0.548238 8:+65142463 MsG0880045836.01.T01:CDS
GATGTTGTGATTGCTGATTG+TGG 0.548690 8:+65140637 MsG0880045836.01.T01:CDS
CTCGCCGCCGGTTCCGTCGG+AGG 0.551251 8:-65140377 None:intergenic
GCAATCACAACATCCTGCTC+CGG 0.552793 8:-65140628 None:intergenic
ACTCCCATTGGTGTTCGGAC+CGG 0.553025 8:-65140479 None:intergenic
ACAGAAGCAAGATTATAAGA+TGG 0.553869 8:+65141160 MsG0880045836.01.T01:intron
ACCGTAGATTGACTCGCCGC+CGG 0.554056 8:-65140389 None:intergenic
TGGGGAGATTGCTGAAGGGG+AGG 0.554625 8:+65140657 MsG0880045836.01.T01:CDS
TGTTTGGGAAGGTTGTGAAA+GGG 0.554643 8:+65140554 MsG0880045836.01.T01:CDS
GACCTAAAACACGAACGGAA+AGG 0.557928 8:+65140436 MsG0880045836.01.T01:CDS
GTACGCAATTGCCAGGAAGA+AGG 0.562491 8:+65143615 MsG0880045836.01.T01:CDS
CTCTGTTATAGAAAATCACT+GGG 0.567299 8:-65143982 None:intergenic
ACCGGCGGCGAGTCAATCTA+CGG 0.568908 8:+65140388 MsG0880045836.01.T01:CDS
GAAGCATGTGGTGTTTGGGA+AGG 0.570028 8:+65140543 MsG0880045836.01.T01:CDS
GTCAAAGGCTTCATGATCCA+AGG 0.574138 8:+65140340 MsG0880045836.01.T01:CDS
CATACACCATATCCGCATCA+AGG 0.575826 8:-65143787 None:intergenic
TGTGATACTTACTGAACTGT+TGG 0.576217 8:-65141416 None:intergenic
TCCGCCTCCGACGGAACCGG+CGG 0.580073 8:+65140373 MsG0880045836.01.T01:CDS
CGAGGACTCCGCATTTGGAT+GGG 0.581508 8:+65140521 MsG0880045836.01.T01:CDS
GGTGACATCTCCGCCTCCGA+CGG 0.583678 8:+65140364 MsG0880045836.01.T01:CDS
GATTGTGGGGAGATTGCTGA+AGG 0.584654 8:+65140652 MsG0880045836.01.T01:CDS
AATACCGGTCCGAACACCAA+TGG 0.584723 8:+65140475 MsG0880045836.01.T01:CDS
CTTGAAATGGAGAGGGACGT+TGG 0.592824 8:-65140296 None:intergenic
ATGGAGTTCTTGAAATGGAG+AGG 0.601662 8:-65140304 None:intergenic
GGATATGGTGTATGTGGCGA+TGG 0.608582 8:+65143796 MsG0880045836.01.T01:three_prime_UTR
GTTCGGACCGGTATTCGCCA+TGG 0.609274 8:-65140467 None:intergenic
GGTTGGGGAGAACGATCGAC+CGG 0.612883 8:+65140609 MsG0880045836.01.T01:CDS
TGGAGTTCTTGAAATGGAGA+GGG 0.613006 8:-65140303 None:intergenic
GACATGTGTTGGGAGAAGGA+TGG 0.614412 8:+65141218 MsG0880045836.01.T01:CDS
AGCATCGGCGGTGAACTCGA+GGG 0.617751 8:+65140178 MsG0880045836.01.T01:CDS
ATGTTCAATTAGCCTTGATG+CGG 0.622340 8:+65143775 MsG0880045836.01.T01:exon
TCATGAAGCCTTTGACGACA+CGG 0.625678 8:-65140333 None:intergenic
TGTTGATCTTGATACCAAGC+CGG 0.625762 8:+65140732 MsG0880045836.01.T01:CDS
TGTTGTGATTGCTGATTGTG+GGG 0.627931 8:+65140639 MsG0880045836.01.T01:CDS
AGCCGGAGGAGCTTGAATGG+TGG 0.631915 8:+65140749 MsG0880045836.01.T01:CDS
TGATGCGGATATGGTGTATG+TGG 0.632119 8:+65143790 MsG0880045836.01.T01:three_prime_UTR
AATTTCCGATCTCTCTGCAC+CGG 0.632806 8:+65140250 MsG0880045836.01.T01:CDS
ATTTCGACCTAAAACACGAA+CGG 0.634503 8:+65140431 MsG0880045836.01.T01:CDS
TCGGACTTTGCAATGCACGA+TGG 0.636187 8:+65142188 MsG0880045836.01.T01:CDS
AATGCTGTTGAATCTATCAA+GGG 0.636468 8:+65140775 MsG0880045836.01.T01:CDS
ATTGTGGGGAGATTGCTGAA+GGG 0.637501 8:+65140653 MsG0880045836.01.T01:CDS
TGGAGAGGGACGTTGGTGTG+TGG 0.640483 8:-65140289 None:intergenic
GTATATGTTACTCAATGACC+TGG 0.641203 8:+65142912 MsG0880045836.01.T01:CDS
GCAAAAGCTCTGTTTCGCAA+AGG 0.644842 8:+65142218 MsG0880045836.01.T01:CDS
GTGTACTTCGACATAAGCAT+CGG 0.649168 8:+65140163 MsG0880045836.01.T01:CDS
GAGAAGGATGGTGTTGACCA+AGG 0.659869 8:+65141230 MsG0880045836.01.T01:CDS
TACTTCGACATAAGCATCGG+CGG 0.673491 8:+65140166 MsG0880045836.01.T01:CDS
ACATGCTTCCCATCCAAATG+CGG 0.674230 8:-65140529 None:intergenic
TGATCTTGATACCAAGCCGG+AGG 0.689161 8:+65140735 MsG0880045836.01.T01:CDS
GCATTTGGATGGGAAGCATG+TGG 0.693552 8:+65140531 MsG0880045836.01.T01:CDS
TTAAAATTAGGTGACCTCAG+TGG 0.703190 8:+65142152 MsG0880045836.01.T01:CDS
TGAAGCCTTTGACGACACGG+TGG 0.743535 8:-65140330 None:intergenic
TCTCTTGAAGCTATCCAGAG+CGG 0.756413 8:-65142938 None:intergenic
AAAGGCTTCATGATCCAAGG+CGG 0.764461 8:+65140343 MsG0880045836.01.T01:CDS
AATCAAGTAAAGCTCCACTG+AGG 0.768633 8:-65142166 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTACTATATATAATACA+TGG - Chr8:65142859-65142878 None:intergenic 10.0%
!!! TTAATGTTTTAGTTTTATTT+GGG + Chr8:65141059-65141078 MsG0880045836.01.T01:intron 10.0%
!!! CTTAATGTTTTAGTTTTATT+TGG + Chr8:65141058-65141077 MsG0880045836.01.T01:intron 15.0%
!!! GTTATTAACTTTTTTAAAGA+TGG + Chr8:65140688-65140707 MsG0880045836.01.T01:CDS 15.0%
!!! TAAATGTGAATTAAATTTTC+AGG + Chr8:65142121-65142140 MsG0880045836.01.T01:intron 15.0%
!! AAATTGACAAAAAGTTTAAG+GGG + Chr8:65142530-65142549 MsG0880045836.01.T01:intron 20.0%
!! AAGTATTTGTAAAGAAAACA+TGG - Chr8:65141887-65141906 None:intergenic 20.0%
!! AATTACTTTCTTATAACACT+GGG + Chr8:65143074-65143093 MsG0880045836.01.T01:intron 20.0%
!! ACAAATTGACAAAAAGTTTA+AGG + Chr8:65142528-65142547 MsG0880045836.01.T01:intron 20.0%
!! AGTATTTGTAAAGAAAACAT+GGG - Chr8:65141886-65141905 None:intergenic 20.0%
!! ATTAAAGACAAAACAATGAA+AGG - Chr8:65143287-65143306 None:intergenic 20.0%
!! CAAATTGACAAAAAGTTTAA+GGG + Chr8:65142529-65142548 MsG0880045836.01.T01:intron 20.0%
!! TAAAGTAGCAAATTACAATT+CGG - Chr8:65142623-65142642 None:intergenic 20.0%
!! TTAAAGACAAAACAATGAAA+GGG - Chr8:65143286-65143305 None:intergenic 20.0%
!! TTCATATAGAAACATATCTT+TGG + Chr8:65143168-65143187 MsG0880045836.01.T01:intron 20.0%
!!! CAAAGTTAATTTGATATTTC+TGG + Chr8:65143542-65143561 MsG0880045836.01.T01:intron 20.0%
!!! GTAATTTGCTATTTGTTTTT+TGG + Chr8:65142872-65142891 MsG0880045836.01.T01:intron 20.0%
!!! TCATGTTTTGTAAATTTAGT+TGG + Chr8:65141784-65141803 MsG0880045836.01.T01:intron 20.0%
! AAATAGTGTAGTGTTTATTC+TGG + Chr8:65143243-65143262 MsG0880045836.01.T01:intron 25.0%
! AATAATCGAAAACAACAATG+AGG - Chr8:65140903-65140922 None:intergenic 25.0%
! ACTAAAACATTAAGCTTACA+TGG - Chr8:65141052-65141071 None:intergenic 25.0%
! AGCAATCAATTATTGAAAGT+CGG - Chr8:65141637-65141656 None:intergenic 25.0%
! AGTCAAAACCATCAAATTTA+TGG + Chr8:65142676-65142695 MsG0880045836.01.T01:intron 25.0%
! ATAAGGTGAATTTCAAAGAA+TGG + Chr8:65140815-65140834 MsG0880045836.01.T01:intron 25.0%
! ATAGATGACATTGTTAAACA+CGG - Chr8:65142297-65142316 None:intergenic 25.0%
! ATTACTTTCTTATAACACTG+GGG + Chr8:65143075-65143094 MsG0880045836.01.T01:intron 25.0%
! CAAAGAATGGTTATAGAATA+GGG + Chr8:65140828-65140847 MsG0880045836.01.T01:intron 25.0%
! CAAATAAAAGATACACACTA+GGG - Chr8:65140930-65140949 None:intergenic 25.0%
! CAATTACTTTCTTATAACAC+TGG + Chr8:65143073-65143092 MsG0880045836.01.T01:intron 25.0%
! CTATATATAATACATGGCTA+TGG - Chr8:65142853-65142872 None:intergenic 25.0%
! GTCAAAACCATCAAATTTAT+GGG + Chr8:65142677-65142696 MsG0880045836.01.T01:intron 25.0%
! TACAAATACTTACTCTCTTA+GGG + Chr8:65141896-65141915 MsG0880045836.01.T01:intron 25.0%
! TAGTAAAATAGTCATTCACA+AGG - Chr8:65141857-65141876 None:intergenic 25.0%
! TCAAAGAATGGTTATAGAAT+AGG + Chr8:65140827-65140846 MsG0880045836.01.T01:intron 25.0%
! TTAACAAGTCAAAGTGTAAA+TGG + Chr8:65143403-65143422 MsG0880045836.01.T01:intron 25.0%
! TTACAAATACTTACTCTCTT+AGG + Chr8:65141895-65141914 MsG0880045836.01.T01:intron 25.0%
! TTGATGCATATCTTTGTTAA+AGG + Chr8:65140871-65140890 MsG0880045836.01.T01:intron 25.0%
!! AAAATCATGAGAAGAGTTTT+AGG - Chr8:65141585-65141604 None:intergenic 25.0%
!! AAATTTTCGTCTTCGAAATT+TGG - Chr8:65140415-65140434 None:intergenic 25.0%
!! TTTATTCTGTTTACTGCTTT+TGG + Chr8:65143704-65143723 MsG0880045836.01.T01:intron 25.0%
!!! AAGACTTTAGTTTTGGAAAT+TGG + Chr8:65141701-65141720 MsG0880045836.01.T01:intron 25.0%
!!! AATTTGATGGTTTTGACTTT+TGG - Chr8:65142674-65142693 None:intergenic 25.0%
!!! AGACTTTAGTTTTGGAAATT+GGG + Chr8:65141702-65141721 MsG0880045836.01.T01:intron 25.0%
!!! AGTTTTATTTGGGAATATAG+TGG + Chr8:65141069-65141088 MsG0880045836.01.T01:intron 25.0%
!!! GTCACCTAATTTTAATTTAC+AGG - Chr8:65142147-65142166 None:intergenic 25.0%
AATGCTGTTGAATCTATCAA+GGG + Chr8:65140775-65140794 MsG0880045836.01.T01:CDS 30.0%
AATTGTTTAATAGGGAGGAA+AGG + Chr8:65142468-65142487 MsG0880045836.01.T01:CDS 30.0%
AATTTGTACCAAGATGGATA+AGG - Chr8:65142515-65142534 None:intergenic 30.0%
ACAGAAGCAAGATTATAAGA+TGG + Chr8:65141160-65141179 MsG0880045836.01.T01:intron 30.0%
AGAATGTGACACATTATAAC+AGG - Chr8:65142064-65142083 None:intergenic 30.0%
AGAGATTTCATGTTGAATTG+TGG - Chr8:65143373-65143392 None:intergenic 30.0%
AGAGTTTCAATAGAGAAAGT+AGG + Chr8:65142261-65142280 MsG0880045836.01.T01:intron 30.0%
ATAACTATAACCAGTCATAG+GGG + Chr8:65142797-65142816 MsG0880045836.01.T01:intron 30.0%
ATTGAGATCCAAAACATCTT+TGG + Chr8:65143482-65143501 MsG0880045836.01.T01:intron 30.0%
ATTGTTTAATAGGGAGGAAA+GGG + Chr8:65142469-65142488 MsG0880045836.01.T01:CDS 30.0%
CAGGCCTGTAAATTAAAATT+AGG + Chr8:65142140-65142159 MsG0880045836.01.T01:intron 30.0%
CCAAATAAAAGATACACACT+AGG - Chr8:65140931-65140950 None:intergenic 30.0%
CTCTGTTATAGAAAATCACT+GGG - Chr8:65143985-65144004 None:intergenic 30.0%
CTGGTGTGAATTGTTTAATA+GGG + Chr8:65142460-65142479 MsG0880045836.01.T01:CDS 30.0%
GAAATGGTAAAGGAAGAAAA+AGG - Chr8:65143652-65143671 None:intergenic 30.0%
GATAACTATAACCAGTCATA+GGG + Chr8:65142796-65142815 MsG0880045836.01.T01:intron 30.0%
GTCAAAGTGTAAATGGAATT+AGG + Chr8:65143410-65143429 MsG0880045836.01.T01:intron 30.0%
TAAAATAGTCATTCACAAGG+TGG - Chr8:65141854-65141873 None:intergenic 30.0%
TAATCAGCAGATCATAAGAA+TGG - Chr8:65141105-65141124 None:intergenic 30.0%
TCTCTGTTATAGAAAATCAC+TGG - Chr8:65143986-65144005 None:intergenic 30.0%
TGATAACTATAACCAGTCAT+AGG + Chr8:65142795-65142814 MsG0880045836.01.T01:intron 30.0%
TGTAGTTAAAGGCTTAAGAA+TGG + Chr8:65141552-65141571 MsG0880045836.01.T01:intron 30.0%
TTAAGTGAACTGATTGAAGA+AGG - Chr8:65142099-65142118 None:intergenic 30.0%
TTACAATTCGGTACTTAAGA+AGG - Chr8:65142611-65142630 None:intergenic 30.0%
TTCCAAAACTAAAGTCTTGA+AGG - Chr8:65141699-65141718 None:intergenic 30.0%
TTCTGTAAAAAAAAGGGGAA+GGG - Chr8:65142758-65142777 None:intergenic 30.0%
TTCTTTAGTATCTCATCTCA+TGG + Chr8:65141330-65141349 MsG0880045836.01.T01:intron 30.0%
TTTATTTCATTCATTGCCTG+TGG + Chr8:65143014-65143033 MsG0880045836.01.T01:intron 30.0%
TTTGTCAATTTGTACCAAGA+TGG - Chr8:65142521-65142540 None:intergenic 30.0%
! AATAAAAAACTGACTCCCAT+TGG - Chr8:65140494-65140513 None:intergenic 30.0%
! AGCTTTAGTTGTGTAGTTAA+AGG + Chr8:65141541-65141560 MsG0880045836.01.T01:intron 30.0%
! CATAGAACTTTTATGCTACT+AGG + Chr8:65142395-65142414 MsG0880045836.01.T01:CDS 30.0%
! CCTAGTGTGTATCTTTTATT+TGG + Chr8:65140928-65140947 MsG0880045836.01.T01:intron 30.0%
! CTGAAACAATCAGATTTTTG+TGG + Chr8:65143820-65143839 MsG0880045836.01.T01:three_prime_UTR 30.0%
! CTTTGGAAATGAACACTATA+AGG + Chr8:65140798-65140817 MsG0880045836.01.T01:CDS 30.0%
! GTCATAATCCAAAGATGTTT+TGG - Chr8:65143493-65143512 None:intergenic 30.0%
! GTCATCATTTTATGTGACTA+GGG + Chr8:65141441-65141460 MsG0880045836.01.T01:intron 30.0%
! TGTCATCATTTTATGTGACT+AGG + Chr8:65141440-65141459 MsG0880045836.01.T01:intron 30.0%
!! TTTTTGGTCTGCTTAATTTC+AGG + Chr8:65142888-65142907 MsG0880045836.01.T01:intron 30.0%
AACCAATCATGTGTGCAATT+TGG - Chr8:65141765-65141784 None:intergenic 35.0%
AACTACACAACTAAAGCTTG+TGG - Chr8:65141539-65141558 None:intergenic 35.0%
AATAGTCACCAACCATCATT+TGG - Chr8:65142979-65142998 None:intergenic 35.0%
ACAAAACAATGAAAGGGAGA+GGG - Chr8:65143280-65143299 None:intergenic 35.0%
ACCAATCATGTGTGCAATTT+GGG - Chr8:65141764-65141783 None:intergenic 35.0%
ATCAATTATTGAAAGTCGGC+TGG - Chr8:65141633-65141652 None:intergenic 35.0%
ATTGTGGAAATGATGTGACT+TGG - Chr8:65143357-65143376 None:intergenic 35.0%
ATTTCGACCTAAAACACGAA+CGG + Chr8:65140431-65140450 MsG0880045836.01.T01:CDS 35.0%
CAGAGTTCCCATAAATTTGA+TGG - Chr8:65142687-65142706 None:intergenic 35.0%
CATACAGTCATATTGTATGC+TGG + Chr8:65142441-65142460 MsG0880045836.01.T01:CDS 35.0%
CGTGTATGTTTCATACACAA+AGG - Chr8:65143457-65143476 None:intergenic 35.0%
GAACAAGACAGCATTTGAAA+TGG - Chr8:65143668-65143687 None:intergenic 35.0%
GAAGGAGTCTATTCATGATA+AGG + Chr8:65143203-65143222 MsG0880045836.01.T01:intron 35.0%
GAATGCTGTTGAATCTATCA+AGG + Chr8:65140774-65140793 MsG0880045836.01.T01:CDS 35.0%
GACAAAAAGTTTAAGGGGAA+GGG + Chr8:65142535-65142554 MsG0880045836.01.T01:intron 35.0%
GCATACAATATGACTGTATG+AGG - Chr8:65142441-65142460 None:intergenic 35.0%
GCTCAAAGAGTTTGTCAAAA+TGG - Chr8:65143958-65143977 None:intergenic 35.0%
GCTGGTGTGAATTGTTTAAT+AGG + Chr8:65142459-65142478 MsG0880045836.01.T01:CDS 35.0%
GGTTATAGTTATCAATTCCC+TGG - Chr8:65142789-65142808 None:intergenic 35.0%
GTATATGTTACTCAATGACC+TGG + Chr8:65142912-65142931 MsG0880045836.01.T01:CDS 35.0%
GTGTGAATTGTTTAATAGGG+AGG + Chr8:65142463-65142482 MsG0880045836.01.T01:CDS 35.0%
GTTCTGTAAAAAAAAGGGGA+AGG - Chr8:65142759-65142778 None:intergenic 35.0%
TAAAAAAAAGGGGAAGGGAA+TGG - Chr8:65142753-65142772 None:intergenic 35.0%
TGACAAAAAGTTTAAGGGGA+AGG + Chr8:65142534-65142553 MsG0880045836.01.T01:intron 35.0%
TGGGGGTTCTGTAAAAAAAA+GGG - Chr8:65142764-65142783 None:intergenic 35.0%
TGTGATACTTACTGAACTGT+TGG - Chr8:65141419-65141438 None:intergenic 35.0%
TTAAAATTAGGTGACCTCAG+TGG + Chr8:65142152-65142171 MsG0880045836.01.T01:CDS 35.0%
TTATGTCGAAGTACACTCTT+GGG - Chr8:65140159-65140178 None:intergenic 35.0%
TTGAGTGTAATGAACTTCCT+GGG + Chr8:65143116-65143135 MsG0880045836.01.T01:intron 35.0%
! AAACATATCTTTGGCTTACC+AGG + Chr8:65143177-65143196 MsG0880045836.01.T01:intron 35.0%
! AACATATCTTTGGCTTACCA+GGG + Chr8:65143178-65143197 MsG0880045836.01.T01:intron 35.0%
! ACTATTTCTTGTCTCGACAT+TGG - Chr8:65143230-65143249 None:intergenic 35.0%
! ATGGTGATACTTTTGCTGAT+TGG + Chr8:65140707-65140726 MsG0880045836.01.T01:CDS 35.0%
! ATGTTGTGATTGCTGATTGT+GGG + Chr8:65140638-65140657 MsG0880045836.01.T01:CDS 35.0%
! ATTTTATCCATGGCGAATAC+CGG + Chr8:65140460-65140479 MsG0880045836.01.T01:CDS 35.0%
! CTATTTCTTGTCTCGACATT+GGG - Chr8:65143229-65143248 None:intergenic 35.0%
! GACAGCATTTGAAATGGTAA+AGG - Chr8:65143662-65143681 None:intergenic 35.0%
!! ATGTTCAATTAGCCTTGATG+CGG + Chr8:65143775-65143794 MsG0880045836.01.T01:exon 35.0%
!! TGAAAAGCATTTATGACCAC+AGG - Chr8:65143033-65143052 None:intergenic 35.0%
!! TGCCTTCAAGACTTTAGTTT+TGG + Chr8:65141694-65141713 MsG0880045836.01.T01:intron 35.0%
!! TGTTTACTGCTTTTGGTTAC+AGG + Chr8:65143711-65143730 MsG0880045836.01.T01:intron 35.0%
!!! AGTTTTTTATTACGACGACG+AGG + Chr8:65140503-65140522 MsG0880045836.01.T01:CDS 35.0%
!!! TTGATGGTTTTGACTTTTGG+AGG - Chr8:65142671-65142690 None:intergenic 35.0%
AAGCAGACCTACTCAGAAAT+GGG - Chr8:65141989-65142008 None:intergenic 40.0%
AATCAAGTAAAGCTCCACTG+AGG - Chr8:65142169-65142188 None:intergenic 40.0%
AATGCATCAGCATACCACAA+AGG - Chr8:65141128-65141147 None:intergenic 40.0%
ACCCAAATTGCACACATGAT+TGG + Chr8:65141760-65141779 MsG0880045836.01.T01:intron 40.0%
ACCTAAAACACGAACGGAAA+GGG + Chr8:65140437-65140456 MsG0880045836.01.T01:CDS 40.0%
AGACTAACTAAAACCGACCT+TGG - Chr8:65141250-65141269 None:intergenic 40.0%
AGGAAAGGGTAAGGAAAAGA+AGG + Chr8:65142483-65142502 MsG0880045836.01.T01:intron 40.0%
AGTTATCAATTCCCTGGTCT+GGG - Chr8:65142783-65142802 None:intergenic 40.0%
ATAGTCATTCACAAGGTGGT+AGG - Chr8:65141850-65141869 None:intergenic 40.0%
ATGGAGTTCTTGAAATGGAG+AGG - Chr8:65140307-65140326 None:intergenic 40.0%
CAGTGGAGCTTTACTTGATT+CGG + Chr8:65142169-65142188 MsG0880045836.01.T01:CDS 40.0%
CATGATATATCCCCTATGAC+TGG - Chr8:65142810-65142829 None:intergenic 40.0%
CGTTTGTAAATCGTCCTGTT+CGG + Chr8:65143318-65143337 MsG0880045836.01.T01:intron 40.0%
CTGGGGGTTCTGTAAAAAAA+AGG - Chr8:65142765-65142784 None:intergenic 40.0%
CTTATGTCGAAGTACACTCT+TGG - Chr8:65140160-65140179 None:intergenic 40.0%
GACAAAACAATGAAAGGGAG+AGG - Chr8:65143281-65143300 None:intergenic 40.0%
GACTTGTCTCGTCAACTATT+AGG + Chr8:65141472-65141491 MsG0880045836.01.T01:intron 40.0%
GCGTTATTTGGACATGTGTT+GGG + Chr8:65141208-65141227 MsG0880045836.01.T01:CDS 40.0%
GGAAAGGGTAAGGAAAAGAA+GGG + Chr8:65142484-65142503 MsG0880045836.01.T01:intron 40.0%
GGAAGATGGAGTTCTTGAAA+TGG - Chr8:65140312-65140331 None:intergenic 40.0%
GGGGGTTCTGTAAAAAAAAG+GGG - Chr8:65142763-65142782 None:intergenic 40.0%
GGGTAAAACCTTATCCATCT+TGG + Chr8:65142504-65142523 MsG0880045836.01.T01:intron 40.0%
GGGTTCTTGATAAAGCTGTA+GGG + Chr8:65143136-65143155 MsG0880045836.01.T01:intron 40.0%
GGTTGCTGATAGACATGATA+AGG + Chr8:65143732-65143751 MsG0880045836.01.T01:intron 40.0%
GTGTACTTCGACATAAGCAT+CGG + Chr8:65140163-65140182 MsG0880045836.01.T01:CDS 40.0%
GTTGAATCTATCAAGGGCTT+TGG + Chr8:65140781-65140800 MsG0880045836.01.T01:CDS 40.0%
GTTGAGTGTAATGAACTTCC+TGG + Chr8:65143115-65143134 MsG0880045836.01.T01:intron 40.0%
GTTTGTAAATCGTCCTGTTC+GGG + Chr8:65143319-65143338 MsG0880045836.01.T01:intron 40.0%
TAGGTCTGCATGATTCAACA+TGG + Chr8:65142017-65142036 MsG0880045836.01.T01:intron 40.0%
TAGGTCTGCTTCATTCAACT+AGG + Chr8:65141998-65142017 MsG0880045836.01.T01:intron 40.0%
TAGTTATCAATTCCCTGGTC+TGG - Chr8:65142784-65142803 None:intergenic 40.0%
TCTATTGAAAGATGCCAACC+TGG - Chr8:65142244-65142263 None:intergenic 40.0%
TGAAAGGGATTGGAGTTGTT+AGG + Chr8:65140569-65140588 MsG0880045836.01.T01:CDS 40.0%
TGCGTTATTTGGACATGTGT+TGG + Chr8:65141207-65141226 MsG0880045836.01.T01:CDS 40.0%
TGGAGTTCTTGAAATGGAGA+GGG - Chr8:65140306-65140325 None:intergenic 40.0%
TGGGTTCTTGATAAAGCTGT+AGG + Chr8:65143135-65143154 MsG0880045836.01.T01:intron 40.0%
TGTATTACTGACCTTCTTCC+TGG - Chr8:65143629-65143648 None:intergenic 40.0%
TGTTGATCTTGATACCAAGC+CGG + Chr8:65140732-65140751 MsG0880045836.01.T01:CDS 40.0%
TGTTTGGGAAGGTTGTGAAA+GGG + Chr8:65140554-65140573 MsG0880045836.01.T01:CDS 40.0%
TTAATAGGGAGGAAAGGGTA+AGG + Chr8:65142474-65142493 MsG0880045836.01.T01:intron 40.0%
TTAGAGTTGGAGCCAAATGA+TGG + Chr8:65142964-65142983 MsG0880045836.01.T01:CDS 40.0%
TTTATCCCTCCTGAAGAACA+GGG - Chr8:65143589-65143608 None:intergenic 40.0%
! AAAAAGAGTACGCAATTGCC+AGG + Chr8:65143608-65143627 MsG0880045836.01.T01:CDS 40.0%
! ACGGAAAGGGATTTTATCCA+TGG + Chr8:65140450-65140469 MsG0880045836.01.T01:CDS 40.0%
! GATGTTGTGATTGCTGATTG+TGG + Chr8:65140637-65140656 MsG0880045836.01.T01:CDS 40.0%
! GCAGAGAGATCGGAAATTTT+CGG - Chr8:65140248-65140267 None:intergenic 40.0%
! TACAGCTTTATCAAGAACCC+AGG - Chr8:65143136-65143155 None:intergenic 40.0%
! TGATCTGCTGATTACCTTTG+TGG + Chr8:65141111-65141130 MsG0880045836.01.T01:intron 40.0%
! TGTTGTGATTGCTGATTGTG+GGG + Chr8:65140639-65140658 MsG0880045836.01.T01:CDS 40.0%
! TTTTATCCCTCCTGAAGAAC+AGG - Chr8:65143590-65143609 None:intergenic 40.0%
!! AATTAGCCTTGATGCGGATA+TGG + Chr8:65143781-65143800 MsG0880045836.01.T01:exon 40.0%
!! CTTCAAGAGAGCATTAGAGT+TGG + Chr8:65142951-65142970 MsG0880045836.01.T01:CDS 40.0%
!! GGCTATCAAAAAGTATCGCA+AGG + Chr8:65141181-65141200 MsG0880045836.01.T01:CDS 40.0%
!! GTTCTGTGCTGTTCTGTTTT+TGG + Chr8:65141279-65141298 MsG0880045836.01.T01:intron 40.0%
!!! GGGAATATAGTGGCTAGTTT+TGG + Chr8:65141079-65141098 MsG0880045836.01.T01:intron 40.0%
!!! TCTGTTTTTGGTTGTTTCCG+TGG + Chr8:65141291-65141310 MsG0880045836.01.T01:intron 40.0%
AAAGGCTTCATGATCCAAGG+CGG + Chr8:65140343-65140362 MsG0880045836.01.T01:CDS 45.0%
AATTTCCGATCTCTCTGCAC+CGG + Chr8:65140250-65140269 MsG0880045836.01.T01:CDS 45.0%
ACATGCTTCCCATCCAAATG+CGG - Chr8:65140532-65140551 None:intergenic 45.0%
AGCAAAGCAGTAACTAGCCA+CGG - Chr8:65141311-65141330 None:intergenic 45.0%
AGTTGGAGCCAAATGATGGT+TGG + Chr8:65142968-65142987 MsG0880045836.01.T01:intron 45.0%
ATTGTGGGGAGATTGCTGAA+GGG + Chr8:65140653-65140672 MsG0880045836.01.T01:CDS 45.0%
CATACACCATATCCGCATCA+AGG - Chr8:65143790-65143809 None:intergenic 45.0%
CTCTTAGGGCCAAACTAACA+AGG + Chr8:65141910-65141929 MsG0880045836.01.T01:intron 45.0%
GAAGCAGACCTACTCAGAAA+TGG - Chr8:65141990-65142009 None:intergenic 45.0%
GACCTAAAACACGAACGGAA+AGG + Chr8:65140436-65140455 MsG0880045836.01.T01:CDS 45.0%
GCAAAAGCTCTGTTTCGCAA+AGG + Chr8:65142218-65142237 MsG0880045836.01.T01:CDS 45.0%
GTCAAAGGCTTCATGATCCA+AGG + Chr8:65140340-65140359 MsG0880045836.01.T01:CDS 45.0%
GTGTTTGGGAAGGTTGTGAA+AGG + Chr8:65140553-65140572 MsG0880045836.01.T01:CDS 45.0%
GTTATCAATTCCCTGGTCTG+GGG - Chr8:65142782-65142801 None:intergenic 45.0%
GTTGTTAGGTCTGTTGAGCT+TGG + Chr8:65140583-65140602 MsG0880045836.01.T01:CDS 45.0%
TAGGGCCAAACTAACAAGGT+TGG + Chr8:65141914-65141933 MsG0880045836.01.T01:intron 45.0%
TCATGAAGCCTTTGACGACA+CGG - Chr8:65140336-65140355 None:intergenic 45.0%
TCGAAGTACACTCTTGGGTT+CGG - Chr8:65140154-65140173 None:intergenic 45.0%
TCGCAAGGCTTTGCGTTATT+TGG + Chr8:65141196-65141215 MsG0880045836.01.T01:CDS 45.0%
TCTCTTGAAGCTATCCAGAG+CGG - Chr8:65142941-65142960 None:intergenic 45.0%
TGAATAGACTCCTTCAACCC+TGG - Chr8:65143198-65143217 None:intergenic 45.0%
TGATGCGGATATGGTGTATG+TGG + Chr8:65143790-65143809 MsG0880045836.01.T01:three_prime_UTR 45.0%
TTATAACACTGGGGTCCTGA+GGG + Chr8:65143084-65143103 MsG0880045836.01.T01:intron 45.0%
TTATCAATTCCCTGGTCTGG+GGG - Chr8:65142781-65142800 None:intergenic 45.0%
TTTGGACATGTGTTGGGAGA+AGG + Chr8:65141214-65141233 MsG0880045836.01.T01:CDS 45.0%
! AACTGACTCCCATTGGTGTT+CGG - Chr8:65140487-65140506 None:intergenic 45.0%
! ACTCTTGGGTTCGGCATTTT+CGG - Chr8:65140145-65140164 None:intergenic 45.0%
! ATGGGAAGCATGTGGTGTTT+GGG + Chr8:65140539-65140558 MsG0880045836.01.T01:CDS 45.0%
! CGGAAATTTTCGGCGGTTTT+GGG - Chr8:65140238-65140257 None:intergenic 45.0%
! GAGAGATCGGAAATTTTCGG+CGG - Chr8:65140245-65140264 None:intergenic 45.0%
! GAGGATTTGTTTACCCGAAC+AGG - Chr8:65143335-65143354 None:intergenic 45.0%
! GCCAAACTAACAAGGTTGGT+GGG + Chr8:65141918-65141937 MsG0880045836.01.T01:intron 45.0%
! GGCTTGGTATCAAGATCAAC+AGG - Chr8:65140733-65140752 None:intergenic 45.0%
! GTGGAAATGATGTGACTTGG+AGG - Chr8:65143354-65143373 None:intergenic 45.0%
! TCCCTTTCCGTTCGTGTTTT+AGG - Chr8:65140441-65140460 None:intergenic 45.0%
! TCGGAAATTTTCGGCGGTTT+TGG - Chr8:65140239-65140258 None:intergenic 45.0%
!! CAAACTAACAAGGTTGGTGG+GGG + Chr8:65141920-65141939 MsG0880045836.01.T01:intron 45.0%
!! CAGAGAAGAGCACTGCTTTA+AGG + Chr8:65141371-65141390 MsG0880045836.01.T01:intron 45.0%
!! CCAAACTAACAAGGTTGGTG+GGG + Chr8:65141919-65141938 MsG0880045836.01.T01:intron 45.0%
!! TACTTCGACATAAGCATCGG+CGG + Chr8:65140166-65140185 MsG0880045836.01.T01:CDS 45.0%
AATACCGGTCCGAACACCAA+TGG + Chr8:65140475-65140494 MsG0880045836.01.T01:CDS 50.0%
ATACCGGTCCGAACACCAAT+GGG + Chr8:65140476-65140495 MsG0880045836.01.T01:CDS 50.0%
ATCCACCATTCAAGCTCCTC+CGG - Chr8:65140754-65140773 None:intergenic 50.0%
ATCTTCCACCGTGTCGTCAA+AGG + Chr8:65140325-65140344 MsG0880045836.01.T01:CDS 50.0%
ATTGCTGAAGGGGAGGATGA+AGG + Chr8:65140664-65140683 MsG0880045836.01.T01:CDS 50.0%
CATACCTTGCCCTGTTCTTC+AGG + Chr8:65143577-65143596 MsG0880045836.01.T01:intron 50.0%
CCCCACCAACCTTGTTAGTT+TGG - Chr8:65141922-65141941 None:intergenic 50.0%
CTCACTGCCCATTTCTGAGT+AGG + Chr8:65141979-65141998 MsG0880045836.01.T01:intron 50.0%
CTTATAACACTGGGGTCCTG+AGG + Chr8:65143083-65143102 MsG0880045836.01.T01:intron 50.0%
CTTGAAATGGAGAGGGACGT+TGG - Chr8:65140299-65140318 None:intergenic 50.0%
GAAGCATGTGGTGTTTGGGA+AGG + Chr8:65140543-65140562 MsG0880045836.01.T01:CDS 50.0%
GACATGTGTTGGGAGAAGGA+TGG + Chr8:65141218-65141237 MsG0880045836.01.T01:CDS 50.0%
GATTGTGGGGAGATTGCTGA+AGG + Chr8:65140652-65140671 MsG0880045836.01.T01:CDS 50.0%
GCAATCACAACATCCTGCTC+CGG - Chr8:65140631-65140650 None:intergenic 50.0%
GGATATGGTGTATGTGGCGA+TGG + Chr8:65143796-65143815 MsG0880045836.01.T01:three_prime_UTR 50.0%
GGCCAAACTAACAAGGTTGG+TGG + Chr8:65141917-65141936 MsG0880045836.01.T01:intron 50.0%
GGGAAGGTTGTGAAAGGGAT+TGG + Chr8:65140559-65140578 MsG0880045836.01.T01:CDS 50.0%
GTACGCAATTGCCAGGAAGA+AGG + Chr8:65143615-65143634 MsG0880045836.01.T01:CDS 50.0%
GTGCTCTTCTCTGCAAAGTC+AGG - Chr8:65141364-65141383 None:intergenic 50.0%
TAGGTCTGTTGAGCTTGGTC+CGG + Chr8:65140588-65140607 MsG0880045836.01.T01:CDS 50.0%
TCGGACTTTGCAATGCACGA+TGG + Chr8:65142188-65142207 MsG0880045836.01.T01:CDS 50.0%
TGATCTTGATACCAAGCCGG+AGG + Chr8:65140735-65140754 MsG0880045836.01.T01:CDS 50.0%
TTCACAAGGTGGTAGGTCAC+CGG - Chr8:65141843-65141862 None:intergenic 50.0%
TTGCTGAAGGGGAGGATGAA+GGG + Chr8:65140665-65140684 MsG0880045836.01.T01:CDS 50.0%
TTGTGGGGAGATTGCTGAAG+GGG + Chr8:65140654-65140673 MsG0880045836.01.T01:CDS 50.0%
TTTACAGAACCCCCAGACCA+GGG + Chr8:65142769-65142788 MsG0880045836.01.T01:intron 50.0%
TTTGACGACACGGTGGAAGA+TGG - Chr8:65140326-65140345 None:intergenic 50.0%
! CTTTGGCTTACCAGGGTTGA+AGG + Chr8:65143185-65143204 MsG0880045836.01.T01:intron 50.0%
! GATGGGAAGCATGTGGTGTT+TGG + Chr8:65140538-65140557 MsG0880045836.01.T01:CDS 50.0%
! GCATTTGGATGGGAAGCATG+TGG + Chr8:65140531-65140550 MsG0880045836.01.T01:CDS 50.0%
! GTTCGGCATTTTCGGAAGAG+AGG - Chr8:65140137-65140156 None:intergenic 50.0%
! TGTCCTGTGCCTGTTTTCTC+CGG + Chr8:65141821-65141840 MsG0880045836.01.T01:intron 50.0%
! TTTTACAGAACCCCCAGACC+AGG + Chr8:65142768-65142787 MsG0880045836.01.T01:intron 50.0%
!! AGGATGGTGTTGACCAAGGT+CGG + Chr8:65141234-65141253 MsG0880045836.01.T01:intron 50.0%
!! GAGAAGGATGGTGTTGACCA+AGG + Chr8:65141230-65141249 MsG0880045836.01.T01:CDS 50.0%
ACCTTGCCCTGTTCTTCAGG+AGG + Chr8:65143580-65143599 MsG0880045836.01.T01:intron 55.0%
ACGAGGACTCCGCATTTGGA+TGG + Chr8:65140520-65140539 MsG0880045836.01.T01:CDS 55.0%
ACTCAACAACAGCCTCCCTC+AGG - Chr8:65143102-65143121 None:intergenic 55.0%
AGCTCTGTTTCGCAAAGGCC+AGG + Chr8:65142223-65142242 MsG0880045836.01.T01:CDS 55.0%
CCTTGCCCTGTTCTTCAGGA+GGG + Chr8:65143581-65143600 MsG0880045836.01.T01:intron 55.0%
CGAGGACTCCGCATTTGGAT+GGG + Chr8:65140521-65140540 MsG0880045836.01.T01:CDS 55.0%
CTGTTGAGCTTGGTCCGGTT+GGG + Chr8:65140593-65140612 MsG0880045836.01.T01:CDS 55.0%
CTGTTTCGCAAAGGCCAGGT+TGG + Chr8:65142227-65142246 MsG0880045836.01.T01:intron 55.0%
GGTAGGTCACCGGAGAAAAC+AGG - Chr8:65141833-65141852 None:intergenic 55.0%
TCACCGGAGAAAACAGGCAC+AGG - Chr8:65141827-65141846 None:intergenic 55.0%
TCTGTTGAGCTTGGTCCGGT+TGG + Chr8:65140592-65140611 MsG0880045836.01.T01:CDS 55.0%
TGAAGCCTTTGACGACACGG+TGG - Chr8:65140333-65140352 None:intergenic 55.0%
TGCTGAAGGGGAGGATGAAG+GGG + Chr8:65140666-65140685 MsG0880045836.01.T01:CDS 55.0%
TGTTGAGCTTGGTCCGGTTG+GGG + Chr8:65140594-65140613 MsG0880045836.01.T01:CDS 55.0%
TTTCGCCGGTGCAGAGAGAT+CGG - Chr8:65140258-65140277 None:intergenic 55.0%
! ACTCCCATTGGTGTTCGGAC+CGG - Chr8:65140482-65140501 None:intergenic 55.0%
! TCTCTCTGCACCGGCGAAAA+AGG + Chr8:65140259-65140278 MsG0880045836.01.T01:CDS 55.0%
! TGCACCGGCGAAAAAGGCAT+CGG + Chr8:65140265-65140284 MsG0880045836.01.T01:CDS 55.0%
!! TGGACCGATGCCTTTTTCGC+CGG - Chr8:65140272-65140291 None:intergenic 55.0%
!!! GGCGGTTTTGGGAACGACAT+CGG - Chr8:65140227-65140246 None:intergenic 55.0%
ACCGGCGGCGAGTCAATCTA+CGG + Chr8:65140388-65140407 MsG0880045836.01.T01:CDS 60.0%
AGCCGGAGGAGCTTGAATGG+TGG + Chr8:65140749-65140768 MsG0880045836.01.T01:CDS 60.0%
AGCTATCCAGAGCGGCATCC+AGG - Chr8:65142933-65142952 None:intergenic 60.0%
CAATGACCTGGATGCCGCTC+TGG + Chr8:65142924-65142943 MsG0880045836.01.T01:CDS 60.0%
CCAAGCCGGAGGAGCTTGAA+TGG + Chr8:65140746-65140765 MsG0880045836.01.T01:CDS 60.0%
CCATTCAAGCTCCTCCGGCT+TGG - Chr8:65140749-65140768 None:intergenic 60.0%
CCCTCCTGAAGAACAGGGCA+AGG - Chr8:65143584-65143603 None:intergenic 60.0%
GACGACGAGGACTCCGCATT+TGG + Chr8:65140516-65140535 MsG0880045836.01.T01:CDS 60.0%
GGTCGATCGTTCTCCCCAAC+CGG - Chr8:65140610-65140629 None:intergenic 60.0%
GGTTGGGGAGAACGATCGAC+CGG + Chr8:65140609-65140628 MsG0880045836.01.T01:CDS 60.0%
GTTCGGACCGGTATTCGCCA+TGG - Chr8:65140470-65140489 None:intergenic 60.0%
TAACACTGGGGTCCTGAGGG+AGG + Chr8:65143087-65143106 MsG0880045836.01.T01:intron 60.0%
TGGAGAGGGACGTTGGTGTG+TGG - Chr8:65140292-65140311 None:intergenic 60.0%
TGGGGAGATTGCTGAAGGGG+AGG + Chr8:65140657-65140676 MsG0880045836.01.T01:CDS 60.0%
!! AAGCATCGGCGGTGAACTCG+AGG + Chr8:65140177-65140196 MsG0880045836.01.T01:CDS 60.0%
!! ACCGTAGATTGACTCGCCGC+CGG - Chr8:65140392-65140411 None:intergenic 60.0%
!! AGCATCGGCGGTGAACTCGA+GGG + Chr8:65140178-65140197 MsG0880045836.01.T01:CDS 60.0%
AGGCGGAGATGTCACCGCCT+TGG - Chr8:65140360-65140379 None:intergenic 65.0%
ATCTCCGCCTCCGACGGAAC+CGG + Chr8:65140370-65140389 MsG0880045836.01.T01:CDS 65.0%
GGAGAACGATCGACCGGAGC+AGG + Chr8:65140615-65140634 MsG0880045836.01.T01:CDS 65.0%
GGTGACATCTCCGCCTCCGA+CGG + Chr8:65140364-65140383 MsG0880045836.01.T01:CDS 65.0%
!! TGACTCGCCGCCGGTTCCGT+CGG - Chr8:65140383-65140402 None:intergenic 70.0%
TCCGCCTCCGACGGAACCGG+CGG + Chr8:65140373-65140392 MsG0880045836.01.T01:CDS 75.0%
!!! CTCGCCGCCGGTTCCGTCGG+AGG - Chr8:65140380-65140399 None:intergenic 80.0%
!!! GCCGCCGGTTCCGTCGGAGG+CGG - Chr8:65140377-65140396 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
Chr8 gene 65140100 65144043 65140100 ID=MsG0880045836.01;Name=MsG0880045836.01
Chr8 mRNA 65140100 65144043 65140100 ID=MsG0880045836.01.T01;Parent=MsG0880045836.01;Name=MsG0880045836.01.T01;_AED=0.33;_eAED=0.37;_QI=48|0.71|0.87|1|1|1|8|257|394
Chr8 exon 65140100 65140819 65140100 ID=MsG0880045836.01.T01:exon:13542;Parent=MsG0880045836.01.T01
Chr8 exon 65141164 65141251 65141164 ID=MsG0880045836.01.T01:exon:13543;Parent=MsG0880045836.01.T01
Chr8 exon 65141374 65141426 65141374 ID=MsG0880045836.01.T01:exon:13544;Parent=MsG0880045836.01.T01
Chr8 exon 65142143 65142244 65142143 ID=MsG0880045836.01.T01:exon:13545;Parent=MsG0880045836.01.T01
Chr8 exon 65142389 65142490 65142389 ID=MsG0880045836.01.T01:exon:13546;Parent=MsG0880045836.01.T01
Chr8 exon 65142910 65142985 65142910 ID=MsG0880045836.01.T01:exon:13547;Parent=MsG0880045836.01.T01
Chr8 exon 65143599 65143636 65143599 ID=MsG0880045836.01.T01:exon:13548;Parent=MsG0880045836.01.T01
Chr8 exon 65143733 65144043 65143733 ID=MsG0880045836.01.T01:exon:13549;Parent=MsG0880045836.01.T01
Chr8 five_prime_UTR 65140100 65140147 65140100 ID=MsG0880045836.01.T01:five_prime_utr;Parent=MsG0880045836.01.T01
Chr8 CDS 65140148 65140819 65140148 ID=MsG0880045836.01.T01:cds;Parent=MsG0880045836.01.T01
Chr8 CDS 65141164 65141251 65141164 ID=MsG0880045836.01.T01:cds;Parent=MsG0880045836.01.T01
Chr8 CDS 65141374 65141426 65141374 ID=MsG0880045836.01.T01:cds;Parent=MsG0880045836.01.T01
Chr8 CDS 65142143 65142244 65142143 ID=MsG0880045836.01.T01:cds;Parent=MsG0880045836.01.T01
Chr8 CDS 65142389 65142490 65142389 ID=MsG0880045836.01.T01:cds;Parent=MsG0880045836.01.T01
Chr8 CDS 65142910 65142985 65142910 ID=MsG0880045836.01.T01:cds;Parent=MsG0880045836.01.T01
Chr8 CDS 65143599 65143636 65143599 ID=MsG0880045836.01.T01:cds;Parent=MsG0880045836.01.T01
Chr8 CDS 65143733 65143786 65143733 ID=MsG0880045836.01.T01:cds;Parent=MsG0880045836.01.T01
Chr8 three_prime_UTR 65143787 65144043 65143787 ID=MsG0880045836.01.T01:three_prime_utr;Parent=MsG0880045836.01.T01
Gene Sequence

>MsG0880045836.01.T01

ATGCCGAACCCAAGAGTGTACTTCGACATAAGCATCGGCGGTGAACTCGAGGGTAGAATCGTAATCGAACTCTTCGCCGATGTCGTTCCCAAAACCGCCGAAAATTTCCGATCTCTCTGCACCGGCGAAAAAGGCATCGGTCCACACACCAACGTCCCTCTCCATTTCAAGAACTCCATCTTCCACCGTGTCGTCAAAGGCTTCATGATCCAAGGCGGTGACATCTCCGCCTCCGACGGAACCGGCGGCGAGTCAATCTACGGTCCAAATTTCGAAGACGAAAATTTCGACCTAAAACACGAACGGAAAGGGATTTTATCCATGGCGAATACCGGTCCGAACACCAATGGGAGTCAGTTTTTTATTACGACGACGAGGACTCCGCATTTGGATGGGAAGCATGTGGTGTTTGGGAAGGTTGTGAAAGGGATTGGAGTTGTTAGGTCTGTTGAGCTTGGTCCGGTTGGGGAGAACGATCGACCGGAGCAGGATGTTGTGATTGCTGATTGTGGGGAGATTGCTGAAGGGGAGGATGAAGGGGTTATTAACTTTTTTAAAGATGGTGATACTTTTGCTGATTGGCCTGTTGATCTTGATACCAAGCCGGAGGAGCTTGAATGGTGGATGAATGCTGTTGAATCTATCAAGGGCTTTGGAAATGAACACTATAAGAAGCAAGATTATAAGATGGCTATCAAAAAGTATCGCAAGGCTTTGCGTTATTTGGACATGTGTTGGGAGAAGGATGGTGTTGACCAAGAGAAGAGCACTGCTTTAAGGAAGATAAAATCTCAAATCTTTACCAACAGTTCAGCCTGTAAATTAAAATTAGGTGACCTCAGTGGAGCTTTACTTGATTCGGACTTTGCAATGCACGATGGAGATAATGCAAAAGCTCTGTTTCGCAAAGGCCAGTTCTATCATAGAACTTTTATGCTACTAGGTTTTAGACATGTCTTTGCTTCCTCATACAGTCATATTGTATGCTGGTGTGAATTGTTTAATAGGGAGGAAAGGGTGTATATGTTACTCAATGACCTGGATGCCGCTCTGGATAGCTTCAAGAGAGCATTAGAGTTGGAGCCAAATGATGGAGGGATAAAAAAAGAGTACGCAATTGCCAGGAAGAAGGTTGCTGATAGACATGATAAGGAGAAAAAAGCTTATTCGAAGATGTTCAATTAG
Protein sequence

>MsG0880045836.01.T01

MPNPRVYFDISIGGELEGRIVIELFADVVPKTAENFRSLCTGEKGIGPHTNVPLHFKNSIFHRVVKGFMIQGGDISASDGTGGESIYGPNFEDENFDLKHERKGILSMANTGPNTNGSQFFITTTRTPHLDGKHVVFGKVVKGIGVVRSVELGPVGENDRPEQDVVIADCGEIAEGEDEGVINFFKDGDTFADWPVDLDTKPEELEWWMNAVESIKGFGNEHYKKQDYKMAIKKYRKALRYLDMCWEKDGVDQEKSTALRKIKSQIFTNSSACKLKLGDLSGALLDSDFAMHDGDNAKALFRKGQFYHRTFMLLGFRHVFASSYSHIVCWCELFNREERVYMLLNDLDAALDSFKRALELEPNDGGIKKEYAIARKKVADRHDKEKKAYSKMFN*