AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480023847.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023847.01.T01 MTR_8g103400 90.476 84 8 0 1 84 187 270 1.47e-49 157
MsG0480023847.01.T01 MTR_8g103420 84.524 84 10 1 4 84 182 265 2.16e-45 146
MsG0480023847.01.T01 MTR_3g095210 62.667 75 21 2 11 84 183 251 2.55e-28 102
MsG0480023847.01.T01 MTR_1g022150 54.321 81 37 0 1 81 178 258 3.32e-27 99.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023847.01.T01 AT2G20130 85.938 64 9 0 9 72 184 247 4.72e-33 114
MsG0480023847.01.T01 AT2G20120 82.812 64 11 0 9 72 194 257 4.73e-32 112
MsG0480023847.01.T01 AT2G20120 82.812 64 11 0 9 72 194 257 4.73e-32 112
MsG0480023847.01.T01 AT2G18460 79.661 59 12 0 14 72 189 247 3.85e-31 110
MsG0480023847.01.T01 AT1G43130 64.789 71 22 1 4 71 139 209 1.61e-27 99.8
MsG0480023847.01.T01 AT1G43130 64.789 71 22 1 4 71 139 209 1.61e-27 99.8
MsG0480023847.01.T01 AT1G43130 64.789 71 22 1 4 71 172 242 2.64e-27 100

Find 43 sgRNAs with CRISPR-Local

Find 358 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGCAGAAATTGTCGTTTC+TGG 0.156987 4:+90427804 MsG0480023847.01.T01:intron
GCTGTTTCACAGACTTATTC+TGG 0.239736 4:+90427174 MsG0480023847.01.T01:CDS
CCCACAAACCATCTTTATAT+TGG 0.257952 4:+90427225 MsG0480023847.01.T01:CDS
TGATAGAAGATGACAGTTAA+AGG 0.332765 4:+90427893 MsG0480023847.01.T01:exon
TTTAGTACTTGTGCATATCT+TGG 0.355304 4:+90428162 MsG0480023847.01.T01:three_prime_UTR
ATTTAACAGCTTATTTCATA+TGG 0.361711 4:+90427930 MsG0480023847.01.T01:three_prime_UTR
CCTTCCCGTACGGATAAGTT+TGG 0.369422 4:-90427285 None:intergenic
TTTAACTGTCATCTTCTATC+AGG 0.374360 4:-90427891 None:intergenic
GTTTGTTTGAAAATATAGTT+TGG 0.385250 4:+90428093 MsG0480023847.01.T01:three_prime_UTR
TAAATTCTACATTCTATTGC+CGG 0.405133 4:-90428068 None:intergenic
TATAGTTTGGGTGATGGTAC+AGG 0.405672 4:+90428106 MsG0480023847.01.T01:three_prime_UTR
ATAAGTTTCATTCATTCAAA+TGG 0.409971 4:+90428248 MsG0480023847.01.T01:three_prime_UTR
CCAATATAAAGATGGTTTGT+GGG 0.434460 4:-90427225 None:intergenic
AACGCTTGATTCACATGTTC+CGG 0.440305 4:+90427854 MsG0480023847.01.T01:CDS
AAGCAATGTGTTGCAAATAC+AGG 0.467265 4:+90427973 MsG0480023847.01.T01:three_prime_UTR
ACCAATATAAAGATGGTTTG+TGG 0.468348 4:-90427226 None:intergenic
TTATCCGTACGGGAAGGAAT+TGG 0.471905 4:+90427291 MsG0480023847.01.T01:CDS
TTACAACATTCTATTGAGGT+AGG 0.495533 4:+90428130 MsG0480023847.01.T01:three_prime_UTR
AATTGAATTGCTATAACAAA+CGG 0.497555 4:-90428191 None:intergenic
GTTTGGCCTAATGACATCCT+TGG 0.502197 4:-90427268 None:intergenic
CATGTGAATCAAGCGTTGAT+AGG 0.513228 4:-90427848 None:intergenic
TTTGTTTGAAAATATAGTTT+GGG 0.523838 4:+90428094 MsG0480023847.01.T01:three_prime_UTR
AGTACTTGTGCATATCTTGG+CGG 0.530227 4:+90428165 MsG0480023847.01.T01:three_prime_UTR
ATCGATCTAACACTGGTTCG+CGG 0.533820 4:-90428016 None:intergenic
TGAAAATATAGTTTGGGTGA+TGG 0.545604 4:+90428100 MsG0480023847.01.T01:three_prime_UTR
TCAACACCAAGGATGTCATT+AGG 0.557684 4:+90427262 MsG0480023847.01.T01:CDS
ATATATCACCAATATAAAGA+TGG 0.565838 4:-90427233 None:intergenic
ACAGACTTATTCTGGAGATG+AGG 0.566556 4:+90427182 MsG0480023847.01.T01:CDS
TACAACATTCTATTGAGGTA+GGG 0.570136 4:+90428131 MsG0480023847.01.T01:three_prime_UTR
GCAGAAATTGTCGTTTCTGG+AGG 0.570313 4:+90427807 MsG0480023847.01.T01:intron
TTCATATGGAGATATCAGAA+AGG 0.578114 4:+90427944 MsG0480023847.01.T01:three_prime_UTR
CTCACCAATTCCTTCCCGTA+CGG 0.579044 4:-90427295 None:intergenic
TTAGGCCAAACTTATCCGTA+CGG 0.579865 4:+90427280 MsG0480023847.01.T01:CDS
ATAATTTATCGATCTAACAC+TGG 0.585191 4:-90428023 None:intergenic
TAGGCCAAACTTATCCGTAC+GGG 0.592673 4:+90427281 MsG0480023847.01.T01:CDS
ATAGTTTGGGTGATGGTACA+GGG 0.593954 4:+90428107 MsG0480023847.01.T01:three_prime_UTR
TCAGGTCTACTTATTTCCAC+CGG 0.598556 4:-90427873 None:intergenic
ATGTGTTGCAAATACAGGCA+TGG 0.621473 4:+90427978 MsG0480023847.01.T01:three_prime_UTR
AGGGTTACAACATTCTATTG+AGG 0.627949 4:+90428126 MsG0480023847.01.T01:three_prime_UTR
GCTTGATTCACATGTTCCGG+TGG 0.639654 4:+90427857 MsG0480023847.01.T01:CDS
TCAAGCGTTGATAGGATCTG+CGG 0.662667 4:-90427840 None:intergenic
CCAAACTTATCCGTACGGGA+AGG 0.668907 4:+90427285 MsG0480023847.01.T01:CDS
TATATTTCTTGTCAACACCA+AGG 0.675625 4:+90427251 MsG0480023847.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTTAATAAATAAAAATTA+AGG - Chr4:90430200-90430219 None:intergenic 0.0%
!! ATTTAATAAATAAAAATTAA+GGG - Chr4:90430199-90430218 None:intergenic 0.0%
!!! TTTTTTTTTATTTTATTTTA+TGG + Chr4:90429162-90429181 MsG0480023847.01.T01:intron 0.0%
!!! ATTTATTTTTTAATTCCATA+AGG + Chr4:90430162-90430181 MsG0480023847.01.T01:intron 10.0%
!!! TAAATGTAGATTTTTTTAAT+CGG + Chr4:90428592-90428611 MsG0480023847.01.T01:intron 10.0%
!!! TTTATTTTTTAATTCCATAA+GGG + Chr4:90430163-90430182 MsG0480023847.01.T01:intron 10.0%
! CGGCGGGGGGGGGGGGGGGG+GGG - Chr4:90429677-90429696 None:intergenic 100.0%
! GCGGCGGGGGGGGGGGGGGG+GGG - Chr4:90429678-90429697 None:intergenic 100.0%
! GGCGGCGGGGGGGGGGGGGG+GGG - Chr4:90429679-90429698 None:intergenic 100.0%
! GGCGGGGGGGGGGGGGGGGG+GGG - Chr4:90429676-90429695 None:intergenic 100.0%
!! AATTGTATATGTGATATTTA+TGG - Chr4:90427532-90427551 None:intergenic 15.0%
!! CTATAATAGTATAACAATTT+AGG + Chr4:90430937-90430956 MsG0480023847.01.T01:intron 15.0%
!! GAATAAACATACTTTAAATT+TGG + Chr4:90430544-90430563 MsG0480023847.01.T01:intron 15.0%
!! TTTGTTTGAAAATATAGTTT+GGG + Chr4:90428094-90428113 MsG0480023847.01.T01:three_prime_UTR 15.0%
!!! TCATTACTCATATAATTTTA+AGG - Chr4:90430835-90430854 None:intergenic 15.0%
!!! TTTCTTATTTTAAGTTGTAA+GGG - Chr4:90428571-90428590 None:intergenic 15.0%
!! AACAATGCATAATGTATTTA+TGG + Chr4:90430990-90431009 MsG0480023847.01.T01:intron 20.0%
!! AATTGAATTGCTATAACAAA+CGG - Chr4:90428194-90428213 None:intergenic 20.0%
!! ACAATGCATAATGTATTTAT+GGG + Chr4:90430991-90431010 MsG0480023847.01.T01:intron 20.0%
!! AGCCAATGTTAAAAATATAT+TGG - Chr4:90427780-90427799 None:intergenic 20.0%
!! ATAAGTTTCATTCATTCAAA+TGG + Chr4:90428248-90428267 MsG0480023847.01.T01:three_prime_UTR 20.0%
!! ATATATCACCAATATAAAGA+TGG - Chr4:90427236-90427255 None:intergenic 20.0%
!! ATGCTAAATGTTAAAAATCA+CGG - Chr4:90431406-90431425 None:intergenic 20.0%
!! ATTTAACAGCTTATTTCATA+TGG + Chr4:90427930-90427949 MsG0480023847.01.T01:three_prime_UTR 20.0%
!! GTTTGTTTGAAAATATAGTT+TGG + Chr4:90428093-90428112 MsG0480023847.01.T01:three_prime_UTR 20.0%
!!! ATGAAATTGCTACTTAATTA+AGG + Chr4:90430851-90430870 MsG0480023847.01.T01:intron 20.0%
!!! ATTTGAGTTTATTAGCTAAA+TGG - Chr4:90430047-90430066 None:intergenic 20.0%
!!! CATTGAAAAGATAAGTTTTT+AGG - Chr4:90430138-90430157 None:intergenic 20.0%
!!! CATTTAGTTTATTAGCTAAA+TGG - Chr4:90430073-90430092 None:intergenic 20.0%
!!! CTCCAATATATTTTTAACAT+TGG + Chr4:90427775-90427794 MsG0480023847.01.T01:intron 20.0%
!!! GTTTCTTATTTTAAGTTGTA+AGG - Chr4:90428572-90428591 None:intergenic 20.0%
!!! TATTATGAAGATGTACTTTT+TGG + Chr4:90427397-90427416 MsG0480023847.01.T01:intron 20.0%
!!! TATTTGTTTTTGTTGTGAAA+GGG - Chr4:90429330-90429349 None:intergenic 20.0%
!!! TTATTTGTTTTTGTTGTGAA+AGG - Chr4:90429331-90429350 None:intergenic 20.0%
!!! TTTAGTCTTCGAATTATTTA+GGG + Chr4:90431241-90431260 MsG0480023847.01.T01:intron 20.0%
!!! TTTGTTTGTGATTTAGAATT+GGG + Chr4:90427462-90427481 MsG0480023847.01.T01:intron 20.0%
!!! TTTTGTTTGTGATTTAGAAT+TGG + Chr4:90427461-90427480 MsG0480023847.01.T01:intron 20.0%
! AAAAAATCTAAAAGGGTTTG+AGG - Chr4:90429148-90429167 None:intergenic 25.0%
! AAAAGCTTAACTCAATTGAT+AGG + Chr4:90430967-90430986 MsG0480023847.01.T01:intron 25.0%
! AAATCACAAACAAAAACATC+AGG - Chr4:90427456-90427475 None:intergenic 25.0%
! AATAATTCGAAGACTAAACT+TGG - Chr4:90431239-90431258 None:intergenic 25.0%
! ACCATTCTCATTGAATTTAA+TGG + Chr4:90428450-90428469 MsG0480023847.01.T01:intron 25.0%
! ATAATTTATCGATCTAACAC+TGG - Chr4:90428026-90428045 None:intergenic 25.0%
! ATAGCAAAACTACAATCAAA+AGG + Chr4:90428275-90428294 MsG0480023847.01.T01:intron 25.0%
! ATGAGTTGTCGTAAATAATT+TGG - Chr4:90431163-90431182 None:intergenic 25.0%
! ATTCAAAACCTTCATTTCAT+TGG + Chr4:90428405-90428424 MsG0480023847.01.T01:intron 25.0%
! CAAATGCATTGTATGATATT+TGG + Chr4:90430377-90430396 MsG0480023847.01.T01:intron 25.0%
! CTTGTAATGATCTCAAAATA+TGG - Chr4:90428325-90428344 None:intergenic 25.0%
! GATTAAAGTTGTCTACATTT+GGG + Chr4:90430496-90430515 MsG0480023847.01.T01:intron 25.0%
! TAAATTCTACATTCTATTGC+CGG - Chr4:90428071-90428090 None:intergenic 25.0%
! TAATGATCTCAAAATATGGT+TGG - Chr4:90428321-90428340 None:intergenic 25.0%
! TAGCATTTCTCAAAGTTTAA+AGG - Chr4:90428541-90428560 None:intergenic 25.0%
! TCCATTAAATTCAATGAGAA+TGG - Chr4:90428454-90428473 None:intergenic 25.0%
! TTCGCTAAATTTGGAAATTT+GGG - Chr4:90429438-90429457 None:intergenic 25.0%
! TTGGATTGTTTGATCTTAAT+CGG + Chr4:90430563-90430582 MsG0480023847.01.T01:intron 25.0%
! TTTCGCTAAATTTGGAAATT+TGG - Chr4:90429439-90429458 None:intergenic 25.0%
!! GTATGTATTATGAATGGATT+TGG - Chr4:90428977-90428996 None:intergenic 25.0%
!! GTTTAGTCTTCGAATTATTT+AGG + Chr4:90431240-90431259 MsG0480023847.01.T01:intron 25.0%
!! TATCAATTGAGTTAAGCTTT+TGG - Chr4:90430968-90430987 None:intergenic 25.0%
!! TCAATGTGTTAACATTTTCA+AGG + Chr4:90431465-90431484 MsG0480023847.01.T01:intron 25.0%
!!! AGGAGATAAAGATTTTTTCA+TGG - Chr4:90429034-90429053 None:intergenic 25.0%
!!! TGTTTTCTGTTTTTCTTTCT+TGG + Chr4:90431729-90431748 MsG0480023847.01.T01:intron 25.0%
AAAAAGTTGCAACACGATTA+AGG - Chr4:90427607-90427626 None:intergenic 30.0%
AAGATTTGTAAGGATTTGTG+TGG - Chr4:90429591-90429610 None:intergenic 30.0%
ACCAATATAAAGATGGTTTG+TGG - Chr4:90427229-90427248 None:intergenic 30.0%
AGATTTGTAAGGATTTGTGT+GGG - Chr4:90429590-90429609 None:intergenic 30.0%
ATAACTTCTAATAGTCGCAT+TGG + Chr4:90430419-90430438 MsG0480023847.01.T01:intron 30.0%
ATAGCCAAATTTAGTCTAGT+CGG + Chr4:90429357-90429376 MsG0480023847.01.T01:intron 30.0%
ATCGCAATGTAAGAAAACAT+GGG + Chr4:90429289-90429308 MsG0480023847.01.T01:intron 30.0%
ATTGTCAACCCAAAAAGTAA+TGG - Chr4:90431375-90431394 None:intergenic 30.0%
CAACAAGTTGTTAAGAAGAT+TGG + Chr4:90429612-90429631 MsG0480023847.01.T01:intron 30.0%
CAATCTTCTTAACAACTTGT+TGG - Chr4:90429614-90429633 None:intergenic 30.0%
CATAGTTGATTATGTTGTGT+GGG - Chr4:90431335-90431354 None:intergenic 30.0%
CATTCATAATACATACAAGC+CGG + Chr4:90428981-90429000 MsG0480023847.01.T01:intron 30.0%
CGATTAAAGTTGTCTACATT+TGG + Chr4:90430495-90430514 MsG0480023847.01.T01:intron 30.0%
CTAGACTAAATTTGGCTATT+AGG - Chr4:90429356-90429375 None:intergenic 30.0%
CTTGGTTTAGCATAAATTAG+TGG - Chr4:90431036-90431055 None:intergenic 30.0%
GAAGGATAAACAAATTAGGT+GGG + Chr4:90429210-90429229 MsG0480023847.01.T01:intron 30.0%
TAAATGCCTCAGTAATCATT+AGG + Chr4:90427662-90427681 MsG0480023847.01.T01:intron 30.0%
TAAGTCATTGTACAACAAGT+TGG - Chr4:90429512-90429531 None:intergenic 30.0%
TAATCCGACTAGACTAAATT+TGG - Chr4:90429364-90429383 None:intergenic 30.0%
TACAACATTCTATTGAGGTA+GGG + Chr4:90428131-90428150 MsG0480023847.01.T01:three_prime_UTR 30.0%
TAGTCTAACTTATGCACTTT+AGG + Chr4:90427706-90427725 MsG0480023847.01.T01:intron 30.0%
TATATTTCTTGTCAACACCA+AGG + Chr4:90427251-90427270 MsG0480023847.01.T01:CDS 30.0%
TCATAGTTGATTATGTTGTG+TGG - Chr4:90431336-90431355 None:intergenic 30.0%
TCCATAATCATTAAATGCCT+CGG + Chr4:90427635-90427654 MsG0480023847.01.T01:intron 30.0%
TCGCTAAATTTGGAAATTTG+GGG - Chr4:90429437-90429456 None:intergenic 30.0%
TCTCGAAGGATAAACAAATT+AGG + Chr4:90429206-90429225 MsG0480023847.01.T01:intron 30.0%
TGAAAATATAGTTTGGGTGA+TGG + Chr4:90428100-90428119 MsG0480023847.01.T01:three_prime_UTR 30.0%
TGAGTTTATTAGCTAAATGG+AGG - Chr4:90430044-90430063 None:intergenic 30.0%
TGATAGAAGATGACAGTTAA+AGG + Chr4:90427893-90427912 MsG0480023847.01.T01:exon 30.0%
TTACAACATTCTATTGAGGT+AGG + Chr4:90428130-90428149 MsG0480023847.01.T01:three_prime_UTR 30.0%
TTCATATGGAGATATCAGAA+AGG + Chr4:90427944-90427963 MsG0480023847.01.T01:three_prime_UTR 30.0%
TTTAACTGTCATCTTCTATC+AGG - Chr4:90427894-90427913 None:intergenic 30.0%
TTTAGTACTTGTGCATATCT+TGG + Chr4:90428162-90428181 MsG0480023847.01.T01:three_prime_UTR 30.0%
! CCAATATAAAGATGGTTTGT+GGG - Chr4:90427228-90427247 None:intergenic 30.0%
! GTTTTGTGTAACATTCATTC+CGG + Chr4:90428049-90428068 MsG0480023847.01.T01:three_prime_UTR 30.0%
! TATAAAGTGTCATCCAAACT+CGG - Chr4:90430642-90430661 None:intergenic 30.0%
! TGGTTTTCCACACAAAAAAT+TGG + Chr4:90429632-90429651 MsG0480023847.01.T01:intron 30.0%
! TGTAACATTGCATGCAATTT+TGG + Chr4:90430605-90430624 MsG0480023847.01.T01:intron 30.0%
!! AAAGATTTGGTGAGTTTAGA+GGG - Chr4:90429896-90429915 None:intergenic 30.0%
!! AACTTGTTGGAAGATTTGTA+AGG - Chr4:90429601-90429620 None:intergenic 30.0%
!! GCTTCATTTGTGTTGTTTAA+GGG - Chr4:90428851-90428870 None:intergenic 30.0%
!! TGCTTCATTTGTGTTGTTTA+AGG - Chr4:90428852-90428871 None:intergenic 30.0%
!! TGTCATTAGCCATTACTTTT+TGG + Chr4:90431363-90431382 MsG0480023847.01.T01:intron 30.0%
!!! GTCATTAGCCATTACTTTTT+GGG + Chr4:90431364-90431383 MsG0480023847.01.T01:intron 30.0%
!!! TAAAGATTTTTTCATGGCAG+TGG - Chr4:90429028-90429047 None:intergenic 30.0%
AAGCAATGTGTTGCAAATAC+AGG + Chr4:90427973-90427992 MsG0480023847.01.T01:three_prime_UTR 35.0%
AAGTGCATAAGTTAGACTAG+AGG - Chr4:90427705-90427724 None:intergenic 35.0%
AATCAAAAGGACCATGAGTT+GGG + Chr4:90428288-90428307 MsG0480023847.01.T01:intron 35.0%
AATGTATAAGCGTGTGTGTT+TGG + Chr4:90430327-90430346 MsG0480023847.01.T01:intron 35.0%
ACATTTGGTTGCATTTGATG+CGG - Chr4:90429259-90429278 None:intergenic 35.0%
ACGCATAGTATGAGTTATAC+AGG + Chr4:90431202-90431221 MsG0480023847.01.T01:intron 35.0%
AGAATCTCATCAACCTTAAC+CGG + Chr4:90431536-90431555 MsG0480023847.01.T01:intron 35.0%
AGATGGAAATTAGAGGATGA+TGG - Chr4:90429547-90429566 None:intergenic 35.0%
AGGGTTACAACATTCTATTG+AGG + Chr4:90428126-90428145 MsG0480023847.01.T01:three_prime_UTR 35.0%
ATAGTATGAGTTATACAGGC+AGG + Chr4:90431206-90431225 MsG0480023847.01.T01:intron 35.0%
ATGGAAATTAGAGGATGATG+GGG - Chr4:90429545-90429564 None:intergenic 35.0%
ATGTATAAGCGTGTGTGTTT+GGG + Chr4:90430328-90430347 MsG0480023847.01.T01:intron 35.0%
ATTACCTACATCATCTGAGA+AGG + Chr4:90431568-90431587 MsG0480023847.01.T01:intron 35.0%
ATTGCATGCAATGTTACAGT+TGG - Chr4:90430603-90430622 None:intergenic 35.0%
ATTGTTTGATGAGGTAAGTG+TGG - Chr4:90428944-90428963 None:intergenic 35.0%
CAACATGGTATTATGTGGTT+TGG - Chr4:90431124-90431143 None:intergenic 35.0%
CATCGCAATGTAAGAAAACA+TGG + Chr4:90429288-90429307 MsG0480023847.01.T01:intron 35.0%
CCCACAAACCATCTTTATAT+TGG + Chr4:90427225-90427244 MsG0480023847.01.T01:CDS 35.0%
CGAAGGATAAACAAATTAGG+TGG + Chr4:90429209-90429228 MsG0480023847.01.T01:intron 35.0%
CGACTATTAGAAGTTATGTC+GGG - Chr4:90430416-90430435 None:intergenic 35.0%
CGGCTTGTATGTATTATGAA+TGG - Chr4:90428983-90429002 None:intergenic 35.0%
CTCGATTTCAAATCTACAAG+AGG - Chr4:90429743-90429762 None:intergenic 35.0%
CTTGATGTCTCGAATAAAAG+AGG - Chr4:90431518-90431537 None:intergenic 35.0%
GAAAAAATCGTAATGTCGTG+TGG - Chr4:90431102-90431121 None:intergenic 35.0%
GATACTAAGACGATGACAAA+CGG + Chr4:90428380-90428399 MsG0480023847.01.T01:intron 35.0%
GATGGAAATTAGAGGATGAT+GGG - Chr4:90429546-90429565 None:intergenic 35.0%
GATTGTTTGATCTTAATCGG+TGG + Chr4:90430566-90430585 MsG0480023847.01.T01:intron 35.0%
GCGACTATTAGAAGTTATGT+CGG - Chr4:90430417-90430436 None:intergenic 35.0%
GTAATGTCGTGTGGTATTAA+GGG - Chr4:90431093-90431112 None:intergenic 35.0%
GTAGTAAAAAGAGCCAAACT+AGG + Chr4:90428825-90428844 MsG0480023847.01.T01:intron 35.0%
GTGATATTTATGGCTCAGTT+GGG - Chr4:90427522-90427541 None:intergenic 35.0%
GTTGGAAAGGTTTAACATTC+CGG - Chr4:90429003-90429022 None:intergenic 35.0%
GTTTATTAGCTAAATGGAGG+TGG - Chr4:90430041-90430060 None:intergenic 35.0%
TAATGTCGTGTGGTATTAAG+GGG - Chr4:90431092-90431111 None:intergenic 35.0%
TACACTGTAGAACTAAAAGC+AGG + Chr4:90427349-90427368 MsG0480023847.01.T01:intron 35.0%
TACCTCATCAAACAATCACA+CGG + Chr4:90428948-90428967 MsG0480023847.01.T01:intron 35.0%
TATACTTCCATCCACCAAAT+TGG + Chr4:90429949-90429968 MsG0480023847.01.T01:intron 35.0%
TCAAGCAACATGGTATTATG+TGG - Chr4:90431129-90431148 None:intergenic 35.0%
TCACGTACTGTTTATACTTG+CGG + Chr4:90427563-90427582 MsG0480023847.01.T01:intron 35.0%
TCGACAAACATTGATGTGAT+TGG - Chr4:90428509-90428528 None:intergenic 35.0%
TCTAATAGTCGCATTGGATT+TGG + Chr4:90430425-90430444 MsG0480023847.01.T01:intron 35.0%
TGTGATATTTATGGCTCAGT+TGG - Chr4:90427523-90427542 None:intergenic 35.0%
TTTCTCGTCTACATGTAGTT+TGG - Chr4:90430463-90430482 None:intergenic 35.0%
TTTGAGGATGATTTGACATG+TGG - Chr4:90429132-90429151 None:intergenic 35.0%
! AAGATAACCAATTTGGTGGA+TGG - Chr4:90429959-90429978 None:intergenic 35.0%
! ACCGAGGCATTTAATGATTA+TGG - Chr4:90427639-90427658 None:intergenic 35.0%
! ATAAAGTGTCATCCAAACTC+GGG - Chr4:90430641-90430660 None:intergenic 35.0%
! ATTTAATGGATATGCACCGA+CGG + Chr4:90428464-90428483 MsG0480023847.01.T01:intron 35.0%
! GAATAAAAGAGGCATACTTG+TGG - Chr4:90431507-90431526 None:intergenic 35.0%
! TCATTGTACAACAAGTTGGA+AGG - Chr4:90429508-90429527 None:intergenic 35.0%
! TCGAATTATTTAGGGTTTCG+CGG + Chr4:90431249-90431268 MsG0480023847.01.T01:intron 35.0%
! TGGATGGAAGTATATCTTTG+TGG - Chr4:90429943-90429962 None:intergenic 35.0%
! TGTTTTCTTACATTGCGATG+TGG - Chr4:90429288-90429307 None:intergenic 35.0%
! TTTGCAGAAATTGTCGTTTC+TGG + Chr4:90427804-90427823 MsG0480023847.01.T01:intron 35.0%
!! AAGATTTGGTGAGTTTAGAG+GGG - Chr4:90429895-90429914 None:intergenic 35.0%
!! AATCATTAAAGAGTGTCTCG+AGG + Chr4:90430798-90430817 MsG0480023847.01.T01:intron 35.0%
!! GAAAGATTTGGTGAGTTTAG+AGG - Chr4:90429897-90429916 None:intergenic 35.0%
!! GAAGAGTGTTTCGCTAAATT+TGG - Chr4:90429447-90429466 None:intergenic 35.0%
AAACAACCAGTGAACACCAA+CGG + Chr4:90428776-90428795 MsG0480023847.01.T01:intron 40.0%
AAATCTACAAGAGGCAACAG+TGG - Chr4:90429734-90429753 None:intergenic 40.0%
AACGCTTGATTCACATGTTC+CGG + Chr4:90427854-90427873 MsG0480023847.01.T01:CDS 40.0%
AAGTTGTCTACATTTGGGCT+TGG + Chr4:90430501-90430520 MsG0480023847.01.T01:intron 40.0%
AGCAATAATGCTAGCTGCAA+AGG + Chr4:90428803-90428822 MsG0480023847.01.T01:intron 40.0%
AGTACTTGTGCATATCTTGG+CGG + Chr4:90428165-90428184 MsG0480023847.01.T01:three_prime_UTR 40.0%
ATGTGTTGCAAATACAGGCA+TGG + Chr4:90427978-90427997 MsG0480023847.01.T01:three_prime_UTR 40.0%
ATTAAGGGGAGGATTCTCTA+GGG - Chr4:90431078-90431097 None:intergenic 40.0%
CAATCAAAAGGACCATGAGT+TGG + Chr4:90428287-90428306 MsG0480023847.01.T01:intron 40.0%
CGAGAAGATAACCAATTTGG+TGG - Chr4:90429963-90429982 None:intergenic 40.0%
CGTAATGTCGTGTGGTATTA+AGG - Chr4:90431094-90431113 None:intergenic 40.0%
CTTGCACCTAATGATTACTG+AGG - Chr4:90427671-90427690 None:intergenic 40.0%
GAATTGTAATGTCGTGTGCT+TGG - Chr4:90431054-90431073 None:intergenic 40.0%
GTCGGGTGATTTGAAAAGTT+AGG - Chr4:90429106-90429125 None:intergenic 40.0%
GTTTCGCGGACAAAAATAGA+TGG + Chr4:90431263-90431282 MsG0480023847.01.T01:intron 40.0%
TAATGCATGTGATCCGGTTA+AGG - Chr4:90431552-90431571 None:intergenic 40.0%
TAGGTGGAGATGGAAATTAG+AGG - Chr4:90429554-90429573 None:intergenic 40.0%
TAGTCGGATTACGATCTAGT+AGG + Chr4:90429373-90429392 MsG0480023847.01.T01:intron 40.0%
TATTAAGGGGAGGATTCTCT+AGG - Chr4:90431079-90431098 None:intergenic 40.0%
TATTAGCTAAATGGAGGTGG+AGG - Chr4:90430038-90430057 None:intergenic 40.0%
TCAACACCAAGGATGTCATT+AGG + Chr4:90427262-90427281 MsG0480023847.01.T01:CDS 40.0%
TCAGGTCTACTTATTTCCAC+CGG - Chr4:90427876-90427895 None:intergenic 40.0%
TGATGTGCTTCGGGAAAATA+TGG - Chr4:90429986-90430005 None:intergenic 40.0%
TGGCGAGAAGATAACCAATT+TGG - Chr4:90429966-90429985 None:intergenic 40.0%
TGTAGGTAATGCATGTGATC+CGG - Chr4:90431558-90431577 None:intergenic 40.0%
TGTGAAAATCTTCACACCGT+CGG - Chr4:90428483-90428502 None:intergenic 40.0%
TTAAGGCTCAAAGTCGATGA+AGG + Chr4:90430868-90430887 MsG0480023847.01.T01:intron 40.0%
TTAGGCCAAACTTATCCGTA+CGG + Chr4:90427280-90427299 MsG0480023847.01.T01:CDS 40.0%
TTGGAAAATGTCCCAACTCA+TGG - Chr4:90428302-90428321 None:intergenic 40.0%
! ACAGACTTATTCTGGAGATG+AGG + Chr4:90427182-90427201 MsG0480023847.01.T01:CDS 40.0%
! ATAGTTTGGGTGATGGTACA+GGG + Chr4:90428107-90428126 MsG0480023847.01.T01:three_prime_UTR 40.0%
! GCTGTTTCACAGACTTATTC+TGG + Chr4:90427174-90427193 MsG0480023847.01.T01:CDS 40.0%
! TATAGTTTGGGTGATGGTAC+AGG + Chr4:90428106-90428125 MsG0480023847.01.T01:three_prime_UTR 40.0%
! TGTTGTTTAAGGGCCTAGTT+TGG - Chr4:90428841-90428860 None:intergenic 40.0%
! TGTTTATCCTTCGAGAGTGT+TGG - Chr4:90429202-90429221 None:intergenic 40.0%
! TTGACTCGCCAATGAAATGA+AGG - Chr4:90428416-90428435 None:intergenic 40.0%
! TTTTTCATGGCAGTGGTTGT+TGG - Chr4:90429021-90429040 None:intergenic 40.0%
!! ACAAAAGCGTCGTACATATG+AGG + Chr4:90428679-90428698 MsG0480023847.01.T01:intron 40.0%
!! CATGTGAATCAAGCGTTGAT+AGG - Chr4:90427851-90427870 None:intergenic 40.0%
!! CTTATGCACTTTAGGTTGCA+AGG + Chr4:90427714-90427733 MsG0480023847.01.T01:intron 40.0%
!! GTCTAGGTAGTGGAAAGATT+TGG - Chr4:90429909-90429928 None:intergenic 40.0%
!!! TGTGGGGCTGTTTTGTTATT+GGG - Chr4:90428715-90428734 None:intergenic 40.0%
AACCATAGAAGAGCTTGCAG+AGG - Chr4:90429054-90429073 None:intergenic 45.0%
ACCAGGATCGGTCAAAATCA+TGG + Chr4:90430351-90430370 MsG0480023847.01.T01:intron 45.0%
AGTTCCGATAAGTTTGACCG+AGG - Chr4:90431658-90431677 None:intergenic 45.0%
ATCGTGAGTTCGTAAGAGCA+AGG + Chr4:90430297-90430316 MsG0480023847.01.T01:intron 45.0%
ATTGGAGTGGTTTAATGCCG+AGG - Chr4:90429859-90429878 None:intergenic 45.0%
CACTACCTAGACATCCAATG+CGG + Chr4:90429917-90429936 MsG0480023847.01.T01:intron 45.0%
CGTACCTTCTCAGATGATGT+AGG - Chr4:90431575-90431594 None:intergenic 45.0%
CTCTCCTCGGTCAAACTTAT+CGG + Chr4:90431651-90431670 MsG0480023847.01.T01:intron 45.0%
GCTCTTACGAACTCACGATA+AGG - Chr4:90430296-90430315 None:intergenic 45.0%
GGTTACATGTAACCCGAGTT+TGG + Chr4:90430626-90430645 MsG0480023847.01.T01:intron 45.0%
GTATATCTTTGTGGCCGCAT+TGG - Chr4:90429934-90429953 None:intergenic 45.0%
GTCCGTGTGATTGTTTGATG+AGG - Chr4:90428953-90428972 None:intergenic 45.0%
GTTTGATGAGGTAAGTGTGG+TGG - Chr4:90428941-90428960 None:intergenic 45.0%
GTTTGGCCTAATGACATCCT+TGG - Chr4:90427271-90427290 None:intergenic 45.0%
TAAGGATTTGTGTGGGTACG+TGG - Chr4:90429583-90429602 None:intergenic 45.0%
TAGGCCAAACTTATCCGTAC+GGG + Chr4:90427281-90427300 MsG0480023847.01.T01:CDS 45.0%
TAGTAGGAGTTCCGATGAGA+AGG + Chr4:90429389-90429408 MsG0480023847.01.T01:intron 45.0%
TAGTTCGTGTCTTGCCTCTT+TGG - Chr4:90428741-90428760 None:intergenic 45.0%
TGATTTGACATGTGGCGTGT+CGG - Chr4:90429124-90429143 None:intergenic 45.0%
TTATCCGTACGGGAAGGAAT+TGG + Chr4:90427291-90427310 MsG0480023847.01.T01:CDS 45.0%
TTGGTGAGTTTAGAGGGGTA+GGG - Chr4:90429890-90429909 None:intergenic 45.0%
TTTGGTGAGTTTAGAGGGGT+AGG - Chr4:90429891-90429910 None:intergenic 45.0%
! ACAAGTTGGAAGGAGTGTGT+CGG - Chr4:90429498-90429517 None:intergenic 45.0%
! ACTGAGGCATTTAATGACCG+AGG - Chr4:90427655-90427674 None:intergenic 45.0%
! AGCATTATTGCTGTTGCCGT+TGG - Chr4:90428795-90428814 None:intergenic 45.0%
! ATTTTACTGCACCTCCACAG+TGG - Chr4:90427428-90427447 None:intergenic 45.0%
! CTGTGGAGGTGCAGTAAAAT+TGG + Chr4:90427428-90427447 MsG0480023847.01.T01:intron 45.0%
! GCAGAAATTGTCGTTTCTGG+AGG + Chr4:90427807-90427826 MsG0480023847.01.T01:intron 45.0%
!! ACCATGATTTTGACCGATCC+TGG - Chr4:90430355-90430374 None:intergenic 45.0%
!! ATCGATCTAACACTGGTTCG+CGG - Chr4:90428019-90428038 None:intergenic 45.0%
!! CTCTCTGGAATGATGTGCTT+CGG - Chr4:90429996-90430015 None:intergenic 45.0%
!! CTGTGGGGCTGTTTTGTTAT+TGG - Chr4:90428716-90428735 None:intergenic 45.0%
!! GAGAGGAGAGGTGTTGTTTA+TGG - Chr4:90429785-90429804 None:intergenic 45.0%
!! TCAAGCGTTGATAGGATCTG+CGG - Chr4:90427843-90427862 None:intergenic 45.0%
!! TCTCTGGAATGATGTGCTTC+GGG - Chr4:90429995-90430014 None:intergenic 45.0%
!!! ACTTTTTGGAGCTTCCACTG+TGG + Chr4:90427411-90427430 MsG0480023847.01.T01:intron 45.0%
!! AAAATAAAAAAAAATCTAAA+AGG - Chr4:90429156-90429175 None:intergenic 5.0%
!! AAATAAAAAAAAATCTAAAA+GGG - Chr4:90429155-90429174 None:intergenic 5.0%
!! TTTAATAAATAAAAATTAAG+GGG - Chr4:90430198-90430217 None:intergenic 5.0%
!!! ATAAATATTTTTCAAATAAT+TGG + Chr4:90430222-90430241 MsG0480023847.01.T01:intron 5.0%
AACAGTGGAAGAGTTGTGGG+GGG - Chr4:90429719-90429738 None:intergenic 50.0%
AAGTTTGACCGAGGAGAGGT+GGG - Chr4:90431649-90431668 None:intergenic 50.0%
AGGCAACAGTGGAAGAGTTG+TGG - Chr4:90429723-90429742 None:intergenic 50.0%
AGGTAAGTGTGGTGGTAGGA+GGG - Chr4:90428933-90428952 None:intergenic 50.0%
ATTTGTGTGGGTACGTGGTG+AGG - Chr4:90429578-90429597 None:intergenic 50.0%
CAACAGTGGAAGAGTTGTGG+GGG - Chr4:90429720-90429739 None:intergenic 50.0%
CATGGCAGTGGTTGTTGGAA+AGG - Chr4:90429016-90429035 None:intergenic 50.0%
CCAAACTTATCCGTACGGGA+AGG + Chr4:90427285-90427304 MsG0480023847.01.T01:CDS 50.0%
CCTTCCCGTACGGATAAGTT+TGG - Chr4:90427288-90427307 None:intergenic 50.0%
CGATAAGTTTGACCGAGGAG+AGG - Chr4:90431653-90431672 None:intergenic 50.0%
CGCATTGGATGTCTAGGTAG+TGG - Chr4:90429919-90429938 None:intergenic 50.0%
CTCACCAATTCCTTCCCGTA+CGG - Chr4:90427298-90427317 None:intergenic 50.0%
CTCCTCTGCAAGCTCTTCTA+TGG + Chr4:90429049-90429068 MsG0480023847.01.T01:intron 50.0%
CTCGAAGCTTACTTCCTCCT+CGG + Chr4:90431612-90431631 MsG0480023847.01.T01:intron 50.0%
GAAAGTGGTGGCCTTCTCAT+CGG - Chr4:90429403-90429422 None:intergenic 50.0%
GAGGTGGAGGTTGTTACAAG+AGG - Chr4:90430025-90430044 None:intergenic 50.0%
GATGAGGTAAGTGTGGTGGT+AGG - Chr4:90428937-90428956 None:intergenic 50.0%
GATTTGACATGTGGCGTGTC+GGG - Chr4:90429123-90429142 None:intergenic 50.0%
GCAACAGTGGAAGAGTTGTG+GGG - Chr4:90429721-90429740 None:intergenic 50.0%
GCGATGTGGCGAGAAACATT+TGG - Chr4:90429274-90429293 None:intergenic 50.0%
GCTTGATTCACATGTTCCGG+TGG + Chr4:90427857-90427876 MsG0480023847.01.T01:CDS 50.0%
GGCAACAGTGGAAGAGTTGT+GGG - Chr4:90429722-90429741 None:intergenic 50.0%
GTGGAGAGGAAAGTGGGAAA+CGG - Chr4:90429837-90429856 None:intergenic 50.0%
TAAGTTTGACCGAGGAGAGG+TGG - Chr4:90431650-90431669 None:intergenic 50.0%
TACAAGAGGAGAGAGCTCTC+TGG - Chr4:90430011-90430030 None:intergenic 50.0%
TGGTGAGTTTAGAGGGGTAG+GGG - Chr4:90429889-90429908 None:intergenic 50.0%
TGTCGTGTGGTATTAAGGGG+AGG - Chr4:90431089-90431108 None:intergenic 50.0%
TTATCATCCCCACCTCTCCT+CGG + Chr4:90431638-90431657 MsG0480023847.01.T01:intron 50.0%
TTGTGGGGGGATGATTCCTT+TGG - Chr4:90429706-90429725 None:intergenic 50.0%
! GTACGAGCACGAGCTTTTGA+GGG - Chr4:90429815-90429834 None:intergenic 50.0%
! TGTGTGTTTGGGACCAGGAT+CGG + Chr4:90430339-90430358 MsG0480023847.01.T01:intron 50.0%
!! ACGAGCTTTTGAGGGTGACT+TGG - Chr4:90429807-90429826 None:intergenic 50.0%
!! ATCCTTCGAGAGTGTTGGAG+TGG - Chr4:90429197-90429216 None:intergenic 50.0%
!! CTTTTGAGGGTGACTTGGAG+AGG - Chr4:90429802-90429821 None:intergenic 50.0%
!! GATGATTCCTTTGGTGGTGG+CGG - Chr4:90429697-90429716 None:intergenic 50.0%
!! TCCTTCGAGAGTGTTGGAGT+GGG - Chr4:90429196-90429215 None:intergenic 50.0%
!! TCTTGCCTCTTTGGCTCTGT+GGG - Chr4:90428732-90428751 None:intergenic 50.0%
!! TGCCTTTCTGGTCTTGCACA+GGG - Chr4:90428875-90428894 None:intergenic 50.0%
!!! GGAGGCGCCAATTTTTTGTG+TGG - Chr4:90429642-90429661 None:intergenic 50.0%
!!! TTTTGGAGCTTCCACTGTGG+AGG + Chr4:90427414-90427433 MsG0480023847.01.T01:intron 50.0%
AGGGTTGCCTTCATGGTGTG+TGG - Chr4:90428914-90428933 None:intergenic 55.0%
AGTTTGACCGAGGAGAGGTG+GGG - Chr4:90431648-90431667 None:intergenic 55.0%
CACCCTGTGCAAGACCAGAA+AGG + Chr4:90428870-90428889 MsG0480023847.01.T01:intron 55.0%
GAGAAGGCCACCACTTTCGA+CGG + Chr4:90429405-90429424 MsG0480023847.01.T01:intron 55.0%
GAGGTAAGTGTGGTGGTAGG+AGG - Chr4:90428934-90428953 None:intergenic 55.0%
GCGTATGCAGTCGAGTGTAG+CGG - Chr4:90431186-90431205 None:intergenic 55.0%
GGAGTGGTTTAATGCCGAGG+TGG - Chr4:90429856-90429875 None:intergenic 55.0%
GGGGATGATAAGATCCGAGG+AGG - Chr4:90431629-90431648 None:intergenic 55.0%
GGGGATGATTCCTTTGGTGG+TGG - Chr4:90429700-90429719 None:intergenic 55.0%
GGTGAGTTTAGAGGGGTAGG+GGG - Chr4:90429888-90429907 None:intergenic 55.0%
GGTGGGGATGATAAGATCCG+AGG - Chr4:90431632-90431651 None:intergenic 55.0%
GGTTTAATGCCGAGGTGGAG+AGG - Chr4:90429851-90429870 None:intergenic 55.0%
GTGGTGAGGATAGGTGGAGA+TGG - Chr4:90429564-90429583 None:intergenic 55.0%
TAGGGGGAGTGGAATTGGAG+TGG - Chr4:90429872-90429891 None:intergenic 55.0%
TCCCACTTTCCTCTCCACCT+CGG + Chr4:90429839-90429858 MsG0480023847.01.T01:intron 55.0%
TGGGGGGATGATTCCTTTGG+TGG - Chr4:90429703-90429722 None:intergenic 55.0%
TGGTAGGAGGGTTGCCTTCA+TGG - Chr4:90428921-90428940 None:intergenic 55.0%
TGTGGCCGCATTGGATGTCT+AGG - Chr4:90429925-90429944 None:intergenic 55.0%
TGTGGGTACGTGGTGAGGAT+AGG - Chr4:90429573-90429592 None:intergenic 55.0%
! AAGCGTGTGTGTTTGGGACC+AGG + Chr4:90430334-90430353 MsG0480023847.01.T01:intron 55.0%
! AGGGGCATATTGCGCCCTTA+TGG - Chr4:90430180-90430199 None:intergenic 55.0%
! AGTTGGAAGGAGTGTGTCGG+AGG - Chr4:90429495-90429514 None:intergenic 55.0%
! CTGTTGCCGTTGGTGTTCAC+TGG - Chr4:90428785-90428804 None:intergenic 55.0%
! GGTACGAGCACGAGCTTTTG+AGG - Chr4:90429816-90429835 None:intergenic 55.0%
! GTTGGAAGGAGTGTGTCGGA+GGG - Chr4:90429494-90429513 None:intergenic 55.0%
! TGCTTTCTGGCGTGCCTTTC+TGG - Chr4:90428887-90428906 None:intergenic 55.0%
!! CCTTCGAGAGTGTTGGAGTG+GGG - Chr4:90429195-90429214 None:intergenic 55.0%
!! CTTCGAGAGTGTTGGAGTGG+GGG - Chr4:90429194-90429213 None:intergenic 55.0%
!! CTTGCCTCTTTGGCTCTGTG+GGG - Chr4:90428731-90428750 None:intergenic 55.0%
!! GTCTTGCCTCTTTGGCTCTG+TGG - Chr4:90428733-90428752 None:intergenic 55.0%
!! GTGCCTTTCTGGTCTTGCAC+AGG - Chr4:90428876-90428895 None:intergenic 55.0%
!! TTCGAGAGTGTTGGAGTGGG+GGG - Chr4:90429193-90429212 None:intergenic 55.0%
ACAGCCCCACAGAGCCAAAG+AGG + Chr4:90428724-90428743 MsG0480023847.01.T01:intron 60.0%
AGGCCACCACTTTCGACGGA+CGG + Chr4:90429409-90429428 MsG0480023847.01.T01:intron 60.0%
AGGGGTAGGGGGAGTGGAAT+TGG - Chr4:90429877-90429896 None:intergenic 60.0%
CCCCACTCCAACACTCTCGA+AGG + Chr4:90429192-90429211 MsG0480023847.01.T01:intron 60.0%
GCAGCGACCACACACCATGA+AGG + Chr4:90428904-90428923 MsG0480023847.01.T01:intron 60.0%
GCCGAGGTGGAGAGGAAAGT+GGG - Chr4:90429843-90429862 None:intergenic 60.0%
GGAGGGAGTTCGCTCGGATA+AGG - Chr4:90429473-90429492 None:intergenic 60.0%
GGGTACGTGGTGAGGATAGG+TGG - Chr4:90429570-90429589 None:intergenic 60.0%
GTGCGTCTTGCACGAGCTTG+TGG - Chr4:90428631-90428650 None:intergenic 60.0%
GTTTAGAGGGGTAGGGGGAG+TGG - Chr4:90429883-90429902 None:intergenic 60.0%
TGCCGAGGTGGAGAGGAAAG+TGG - Chr4:90429844-90429863 None:intergenic 60.0%
! GAAGGAGTGTGTCGGAGGGA+GGG - Chr4:90429490-90429509 None:intergenic 60.0%
! GAGGGTGACTTGGAGAGGAG+AGG - Chr4:90429797-90429816 None:intergenic 60.0%
! GGTGTGTGGTCGCTGCTTTC+TGG - Chr4:90428900-90428919 None:intergenic 60.0%
!! ATTCCTTTGGTGGTGGCGGC+GGG - Chr4:90429693-90429712 None:intergenic 60.0%
!! GATTCCTTTGGTGGTGGCGG+CGG - Chr4:90429694-90429713 None:intergenic 60.0%
TCGGAGGGAGGGAGTTCGCT+CGG - Chr4:90429479-90429498 None:intergenic 65.0%
! GGAAGGAGTGTGTCGGAGGG+AGG - Chr4:90429491-90429510 None:intergenic 65.0%
!! TTCCTTTGGTGGTGGCGGCG+GGG - Chr4:90429692-90429711 None:intergenic 65.0%
GCGCCGTCCGTCGAAAGTGG+TGG - Chr4:90429415-90429434 None:intergenic 70.0%
!! TCCTTTGGTGGTGGCGGCGG+GGG - Chr4:90429691-90429710 None:intergenic 70.0%
! GGGGGGGTGTGGGTGGTTGG+AGG - Chr4:90429660-90429679 None:intergenic 75.0%
!! CCTTTGGTGGTGGCGGCGGG+GGG - Chr4:90429690-90429709 None:intergenic 75.0%
!! CTTTGGTGGTGGCGGCGGGG+GGG - Chr4:90429689-90429708 None:intergenic 75.0%
!! GGGGCGCCGTCCGTCGAAAG+TGG - Chr4:90429418-90429437 None:intergenic 75.0%
!! TTTGGTGGTGGCGGCGGGGG+GGG - Chr4:90429688-90429707 None:intergenic 75.0%
! CCCCCCGCCGCCACCACCAA+AGG + Chr4:90429687-90429706 MsG0480023847.01.T01:intron 80.0%
!! GGGGGGGGGGTGTGGGTGGT+TGG - Chr4:90429663-90429682 None:intergenic 80.0%
!!! TTGGTGGTGGCGGCGGGGGG+GGG - Chr4:90429687-90429706 None:intergenic 80.0%
!!! TGGTGGTGGCGGCGGGGGGG+GGG - Chr4:90429686-90429705 None:intergenic 85.0%
!! GGGGGGGGGGGGGGGGGTGT+GGG - Chr4:90429670-90429689 None:intergenic 90.0%
!! GGGGGGGGGGGGGGTGTGGG+TGG - Chr4:90429667-90429686 None:intergenic 90.0%
!!! GGTGGTGGCGGCGGGGGGGG+GGG - Chr4:90429685-90429704 None:intergenic 90.0%
!!! GTGGTGGCGGCGGGGGGGGG+GGG - Chr4:90429684-90429703 None:intergenic 90.0%
!!! TGGTGGCGGCGGGGGGGGGG+GGG - Chr4:90429683-90429702 None:intergenic 90.0%
! GGGGGGGGGGGGGGGGGGTG+TGG - Chr4:90429671-90429690 None:intergenic 95.0%
! GTGGCGGCGGGGGGGGGGGG+GGG - Chr4:90429681-90429700 None:intergenic 95.0%
! TGGCGGCGGGGGGGGGGGGG+GGG - Chr4:90429680-90429699 None:intergenic 95.0%
!! GGTGGCGGCGGGGGGGGGGG+GGG - Chr4:90429682-90429701 None:intergenic 95.0%
Chromosome Type Strat End Strand Name
Chr4 gene 90427153 90431772 90427153 ID=MsG0480023847.01;Name=MsG0480023847.01
Chr4 mRNA 90427153 90431772 90427153 ID=MsG0480023847.01.T01;Parent=MsG0480023847.01;Name=MsG0480023847.01.T01;_AED=0.49;_eAED=0.49;_QI=0|1|0.66|1|0.5|0.33|3|399|84
Chr4 exon 90427153 90427312 90427153 ID=MsG0480023847.01.T01:exon:7552;Parent=MsG0480023847.01.T01
Chr4 exon 90427811 90428269 90427811 ID=MsG0480023847.01.T01:exon:7553;Parent=MsG0480023847.01.T01
Chr4 exon 90431738 90431772 90431738 ID=MsG0480023847.01.T01:exon:7554;Parent=MsG0480023847.01.T01
Chr4 CDS 90427153 90427312 90427153 ID=MsG0480023847.01.T01:cds;Parent=MsG0480023847.01.T01
Chr4 CDS 90427811 90427905 90427811 ID=MsG0480023847.01.T01:cds;Parent=MsG0480023847.01.T01
Chr4 three_prime_UTR 90427906 90428269 90427906 ID=MsG0480023847.01.T01:three_prime_utr;Parent=MsG0480023847.01.T01
Chr4 three_prime_UTR 90431738 90431772 90431738 ID=MsG0480023847.01.T01:three_prime_utr;Parent=MsG0480023847.01.T01
Gene Sequence

>MsG0480023847.01.T01

TTGAACTATTTTAATTATATCGCTGTTTCACAGACTTATTCTGGAGATGAGGAGTTATGCTGTGTCTATGTTCCCACAAACCATCTTTATATTGGTGATATATTTCTTGTCAACACCAAGGATGTCATTAGGCCAAACTTATCCGTACGGGAAGGAATTGAAATTGTCGTTTCTGGAGGCATGTCAATGCCGCAGATCCTATCAACGCTTGATTCACATGTTCCGGTGGAAATAAGTAGACCTGATAGAAGATGA
Protein sequence

>MsG0480023847.01.T01

LNYFNYIAVSQTYSGDEELCCVYVPTNHLYIGDIFLVNTKDVIRPNLSVREGIEIVVSGGMSMPQILSTLDSHVPVEISRPDRR*