AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480020065.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480020065.01.T01 MTR_4g037470 99.787 470 1 0 1 470 1 470 0.0 970
MsG0480020065.01.T01 MTR_4g037470 97.912 479 1 1 1 470 1 479 0.0 963
MsG0480020065.01.T01 MTR_2g090190 80.294 477 80 6 1 470 1 470 0.0 738
MsG0480020065.01.T01 MTR_7g080170 49.666 449 188 8 51 469 50 490 3.13e-143 420
MsG0480020065.01.T01 MTR_7g021530 50.513 390 170 8 1 380 1 377 1.33e-130 384
MsG0480020065.01.T01 MTR_7g021530 50.513 390 170 8 1 380 42 418 3.76e-130 384
MsG0480020065.01.T01 MTR_7g070510 43.552 411 197 8 62 468 57 436 2.36e-115 347
MsG0480020065.01.T01 MTR_7g021530 53.226 310 137 4 78 380 19 327 2.95e-114 340
MsG0480020065.01.T01 MTR_8g017240 48.787 371 157 9 1 370 1 339 2.59e-113 338
MsG0480020065.01.T01 MTR_7g080170 46.923 390 170 7 109 469 1 382 2.40e-111 334
MsG0480020065.01.T01 MTR_7g112490 45.679 324 169 3 58 379 52 370 1.28e-102 311
MsG0480020065.01.T01 MTR_7g021530 48.193 332 150 7 1 322 1 320 2.43e-102 309
MsG0480020065.01.T01 MTR_4g013295 46.855 318 157 4 56 371 37 344 2.64e-102 310
MsG0480020065.01.T01 MTR_7g112490 45.963 322 167 3 60 379 72 388 2.66e-102 311
MsG0480020065.01.T01 MTR_7g021530 48.193 332 150 7 1 322 42 361 1.22e-101 308
MsG0480020065.01.T01 MTR_1g083690 44.272 323 166 3 49 370 41 350 4.54e-100 304
MsG0480020065.01.T01 MTR_4g120410 46.382 304 147 4 69 370 63 352 1.49e-99 303
MsG0480020065.01.T01 MTR_2g435550 46.885 305 148 4 67 370 48 339 3.96e-99 301
MsG0480020065.01.T01 MTR_2g435550 46.885 305 148 4 67 370 62 353 4.99e-99 301
MsG0480020065.01.T01 MTR_2g435550 45.455 308 149 5 67 368 62 356 2.62e-94 290
MsG0480020065.01.T01 MTR_1g016620 46.965 313 152 3 61 373 33 331 7.73e-90 277
MsG0480020065.01.T01 MTR_7g021530 49.231 195 92 3 54 241 45 239 3.20e-60 198
MsG0480020065.01.T01 MTR_7g021530 49.231 195 92 3 54 241 86 280 8.61e-60 198
MsG0480020065.01.T01 MTR_6g087000 29.524 315 164 9 79 372 106 383 7.26e-27 114
MsG0480020065.01.T01 MTR_6g087000 29.524 315 164 9 79 372 106 383 1.77e-26 114
MsG0480020065.01.T01 MTR_4g118340 26.646 319 177 8 79 378 68 348 7.96e-26 109
MsG0480020065.01.T01 MTR_5g009370 33.582 268 122 9 74 332 60 280 9.44e-24 102
MsG0480020065.01.T01 MTR_2g020970 27.219 338 188 10 79 396 69 368 3.96e-23 102
MsG0480020065.01.T01 MTR_2g020970 27.476 313 170 9 79 372 69 343 7.08e-23 100
MsG0480020065.01.T01 MTR_3g105730 29.577 284 137 9 98 378 45 268 2.71e-19 88.2
MsG0480020065.01.T01 MTR_3g105730 29.577 284 137 9 98 378 67 290 3.73e-19 88.2
MsG0480020065.01.T01 MTR_1g115570 30.435 253 118 9 96 347 126 321 3.83e-19 89.0
MsG0480020065.01.T01 MTR_6g081850 30.045 223 117 7 165 369 117 318 7.72e-19 87.8
MsG0480020065.01.T01 MTR_1g014640 30.677 251 120 7 98 347 110 307 9.21e-19 87.8
MsG0480020065.01.T01 MTR_1g013400 30.677 251 120 7 98 347 110 307 9.21e-19 87.8
MsG0480020065.01.T01 MTR_8g102550 30.380 237 114 7 96 329 152 340 3.17e-18 87.0
MsG0480020065.01.T01 MTR_3g104710 29.688 256 137 10 77 329 269 484 5.09e-18 87.0
MsG0480020065.01.T01 MTR_4g125810 27.888 251 135 8 84 329 236 445 1.09e-17 85.9
MsG0480020065.01.T01 MTR_3g068200 34.595 185 92 6 159 330 153 321 2.13e-17 84.3
MsG0480020065.01.T01 MTR_5g080680 29.151 271 127 9 74 330 109 328 6.97e-17 82.8
MsG0480020065.01.T01 MTR_2g078760 35.556 180 90 8 193 370 98 253 1.68e-15 76.6
MsG0480020065.01.T01 MTR_1g015110 27.869 244 135 6 89 329 283 488 2.33e-15 79.0
MsG0480020065.01.T01 MTR_2g078760 35.556 180 90 8 193 370 177 332 2.74e-15 77.4
MsG0480020065.01.T01 MTR_8g463130 35.028 177 97 8 172 347 106 265 3.23e-15 76.3
MsG0480020065.01.T01 MTR_8g463130 34.463 177 98 7 172 347 78 237 3.26e-15 75.9
MsG0480020065.01.T01 MTR_0015s0140 26.349 315 173 13 93 378 76 360 3.45e-15 77.4
MsG0480020065.01.T01 MTR_3g032660 27.245 323 155 14 91 371 63 347 8.30e-15 76.6
MsG0480020065.01.T01 MTR_3g032700 26.611 357 176 16 91 405 63 375 1.13e-14 76.3
MsG0480020065.01.T01 MTR_1g086350 28.030 264 134 11 96 349 102 319 5.90e-14 73.6
MsG0480020065.01.T01 MTR_1g086350 28.030 264 134 11 96 349 118 335 6.20e-14 73.6
MsG0480020065.01.T01 MTR_4g094208 30.645 186 108 8 166 347 92 260 7.41e-14 72.4
MsG0480020065.01.T01 MTR_3g105880 28.826 281 158 10 71 330 28 287 1.64e-13 72.0
MsG0480020065.01.T01 MTR_1g028300 28.870 239 113 7 96 330 145 330 2.55e-13 71.6
MsG0480020065.01.T01 MTR_3g105880 29.181 281 157 11 71 330 28 287 2.77e-13 71.2
MsG0480020065.01.T01 MTR_8g074930 26.087 253 138 10 168 378 4 249 5.20e-13 69.7
MsG0480020065.01.T01 MTR_5g024340 25.833 240 118 7 96 330 124 308 5.52e-13 70.9
MsG0480020065.01.T01 MTR_3g091060 31.481 162 93 4 169 329 162 306 6.29e-13 70.5
MsG0480020065.01.T01 MTR_8g074930 26.087 253 138 10 168 378 116 361 8.01e-13 70.5
MsG0480020065.01.T01 MTR_5g071550 25.439 342 195 11 35 370 87 374 1.14e-12 69.7
MsG0480020065.01.T01 MTR_1g086350 27.586 261 133 11 99 349 19 233 1.27e-12 68.6
MsG0480020065.01.T01 MTR_0015s0140 28.095 210 122 8 197 378 98 306 1.43e-12 68.9
MsG0480020065.01.T01 MTR_7g090530 27.660 282 145 11 91 349 64 309 1.46e-12 69.7
MsG0480020065.01.T01 MTR_4g123080 25.298 336 173 14 55 368 47 326 2.04e-12 68.9
MsG0480020065.01.T01 MTR_4g123080 25.298 336 173 14 55 368 65 344 2.55e-12 68.6
MsG0480020065.01.T01 MTR_7g081020 28.879 232 117 12 197 391 149 369 2.80e-12 68.6
MsG0480020065.01.T01 MTR_3g032590 27.341 267 123 10 185 392 137 391 4.34e-12 68.2
MsG0480020065.01.T01 MTR_1g050520 31.548 168 96 5 168 330 457 610 1.78e-11 67.0
MsG0480020065.01.T01 MTR_1g106855 24.107 336 192 13 89 390 54 360 5.90e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480020065.01.T01 AT4G03415 76.471 476 98 6 1 470 1 468 0.0 677
MsG0480020065.01.T01 AT4G03415 76.471 476 98 6 1 470 1 468 0.0 677
MsG0480020065.01.T01 AT4G03415 76.471 476 98 6 1 470 1 468 0.0 677
MsG0480020065.01.T01 AT1G03590 68.710 473 126 6 1 466 1 458 0.0 622
MsG0480020065.01.T01 AT1G16220 48.026 456 213 7 35 470 35 486 9.91e-146 426
MsG0480020065.01.T01 AT3G02750 50.559 447 180 8 51 463 49 488 1.93e-140 412
MsG0480020065.01.T01 AT3G02750 50.559 447 180 8 51 463 49 488 1.93e-140 412
MsG0480020065.01.T01 AT1G79630 48.098 447 194 8 57 470 58 499 4.29e-138 407
MsG0480020065.01.T01 AT1G79630 48.098 447 194 8 57 470 54 495 6.70e-138 406
MsG0480020065.01.T01 AT5G36250 48.252 429 169 7 51 463 52 443 2.79e-134 395
MsG0480020065.01.T01 AT3G02750 46.888 482 180 9 51 463 49 523 2.34e-132 393
MsG0480020065.01.T01 AT5G36250 46.953 443 168 8 51 463 52 457 2.34e-130 385
MsG0480020065.01.T01 AT1G79630 47.482 417 181 8 87 470 18 429 2.05e-123 367
MsG0480020065.01.T01 AT1G79630 47.482 417 181 8 87 470 18 429 2.05e-123 367
MsG0480020065.01.T01 AT1G79630 52.427 309 137 3 167 470 86 389 7.79e-110 330
MsG0480020065.01.T01 AT1G79630 52.427 309 137 3 167 470 86 389 7.79e-110 330
MsG0480020065.01.T01 AT1G79630 52.427 309 137 3 167 470 86 389 7.79e-110 330
MsG0480020065.01.T01 AT1G79630 52.427 309 137 3 167 470 86 389 7.79e-110 330
MsG0480020065.01.T01 AT5G01700 48.094 341 161 4 58 397 39 364 5.87e-104 315
MsG0480020065.01.T01 AT5G01700 49.235 327 150 4 72 397 4 315 4.33e-103 311
MsG0480020065.01.T01 AT5G27930 43.658 339 178 3 32 369 27 353 3.56e-101 308
MsG0480020065.01.T01 AT5G27930 43.658 339 178 3 32 369 27 353 3.56e-101 308
MsG0480020065.01.T01 AT3G05640 45.541 314 152 3 58 370 54 349 3.82e-101 307
MsG0480020065.01.T01 AT3G05640 45.541 314 152 3 58 370 54 349 3.82e-101 307
MsG0480020065.01.T01 AT3G05640 45.541 314 152 3 58 370 54 349 3.82e-101 307
MsG0480020065.01.T01 AT5G36250 52.297 283 122 4 51 320 52 334 4.56e-101 306
MsG0480020065.01.T01 AT3G16800 42.208 308 156 4 65 370 61 348 4.21e-84 263
MsG0480020065.01.T01 AT3G16800 42.208 308 156 4 65 370 61 348 4.21e-84 263
MsG0480020065.01.T01 AT3G16800 42.208 308 156 4 65 370 61 348 4.21e-84 263
MsG0480020065.01.T01 AT5G27930 44.788 259 130 3 60 317 55 301 3.05e-80 252
MsG0480020065.01.T01 AT5G26010 44.702 302 142 5 73 373 50 327 9.95e-80 251
MsG0480020065.01.T01 AT4G32950 39.773 352 162 7 28 377 20 323 2.64e-77 244
MsG0480020065.01.T01 AT3G16800 41.026 273 140 3 99 370 1 253 1.46e-71 227
MsG0480020065.01.T01 AT3G16800 41.026 273 140 3 99 370 1 253 1.46e-71 227
MsG0480020065.01.T01 AT4G32950 39.041 292 128 7 28 317 20 263 3.10e-57 191
MsG0480020065.01.T01 AT3G16800 35.754 179 93 4 65 241 61 219 1.05e-32 124
MsG0480020065.01.T01 AT2G20050 29.430 316 166 9 79 375 125 402 4.23e-29 121
MsG0480020065.01.T01 AT2G20050 29.430 316 166 9 79 375 125 402 4.67e-29 121
MsG0480020065.01.T01 AT3G06270 28.041 296 151 9 79 353 70 324 1.25e-22 99.4
MsG0480020065.01.T01 AT3G11410 33.333 276 108 11 74 324 112 336 1.77e-22 99.8
MsG0480020065.01.T01 AT5G10740 35.417 192 102 5 161 349 93 265 1.76e-20 93.2
MsG0480020065.01.T01 AT5G10740 35.417 192 102 5 161 349 93 265 1.76e-20 93.2
MsG0480020065.01.T01 AT5G59220 31.541 279 114 11 74 330 119 342 2.93e-20 93.2
MsG0480020065.01.T01 AT5G24940 34.737 190 106 5 161 349 93 265 3.84e-20 93.2
MsG0480020065.01.T01 AT1G07430 28.772 285 133 9 74 338 128 362 4.68e-20 92.8
MsG0480020065.01.T01 AT4G28400 37.778 180 94 9 169 347 82 244 1.74e-19 88.6
MsG0480020065.01.T01 AT2G34740 36.667 210 104 10 166 370 150 335 2.58e-19 89.4
MsG0480020065.01.T01 AT4G28400 37.778 180 94 9 169 347 104 266 3.25e-19 88.2
MsG0480020065.01.T01 AT1G72770 33.603 247 113 11 96 329 238 446 1.02e-18 89.4
MsG0480020065.01.T01 AT1G72770 33.603 247 113 11 96 329 238 446 1.02e-18 89.4
MsG0480020065.01.T01 AT1G72770 33.603 247 113 11 96 329 238 446 1.02e-18 89.4
MsG0480020065.01.T01 AT4G31750 32.547 212 120 6 161 371 93 282 1.51e-18 86.7
MsG0480020065.01.T01 AT4G31750 32.547 212 120 6 161 371 93 282 1.51e-18 86.7
MsG0480020065.01.T01 AT4G31750 33.010 206 111 7 169 371 101 282 1.60e-18 86.7
MsG0480020065.01.T01 AT1G78200 34.239 184 106 5 167 349 54 223 1.02e-17 82.8
MsG0480020065.01.T01 AT1G78200 34.239 184 106 5 167 349 54 223 1.02e-17 82.8
MsG0480020065.01.T01 AT1G78200 34.239 184 106 5 167 349 99 268 1.26e-17 83.6
MsG0480020065.01.T01 AT1G78200 34.239 184 106 5 167 349 99 268 1.26e-17 83.6
MsG0480020065.01.T01 AT1G78200 34.239 184 106 5 167 349 99 268 1.26e-17 83.6
MsG0480020065.01.T01 AT1G43900 30.400 250 119 7 96 344 154 349 3.01e-16 80.5
MsG0480020065.01.T01 AT5G57050 29.487 234 123 7 96 329 160 351 4.37e-16 80.5
MsG0480020065.01.T01 AT5G57050 29.487 234 123 7 96 329 120 311 5.75e-16 80.1
MsG0480020065.01.T01 AT2G20630 36.066 183 99 9 167 348 98 263 6.78e-16 78.2
MsG0480020065.01.T01 AT4G26080 30.769 234 118 9 96 329 172 361 6.93e-16 80.1
MsG0480020065.01.T01 AT2G20630 38.217 157 80 7 193 348 123 263 9.64e-16 78.2
MsG0480020065.01.T01 AT1G34750 31.606 193 112 8 159 349 93 267 1.32e-15 77.4
MsG0480020065.01.T01 AT1G34750 31.606 193 112 8 159 349 93 267 1.32e-15 77.4
MsG0480020065.01.T01 AT1G34750 31.606 193 112 8 159 349 93 267 1.32e-15 77.4
MsG0480020065.01.T01 AT5G53140 28.287 251 126 7 98 347 134 331 2.40e-15 78.2
MsG0480020065.01.T01 AT5G53140 28.287 251 126 7 98 347 134 331 2.40e-15 78.2
MsG0480020065.01.T01 AT1G17550 30.204 245 117 10 96 325 237 442 7.53e-15 77.0
MsG0480020065.01.T01 AT1G17550 30.204 245 117 10 96 325 237 442 7.53e-15 77.0
MsG0480020065.01.T01 AT5G51760 31.553 206 113 6 157 350 153 342 4.15e-14 74.3
MsG0480020065.01.T01 AT5G51760 31.553 206 113 6 157 350 183 372 4.71e-14 74.3
MsG0480020065.01.T01 AT5G06750 25.559 313 172 12 94 374 80 363 5.66e-14 73.9
MsG0480020065.01.T01 AT5G06750 25.559 313 172 12 94 374 80 363 5.66e-14 73.9
MsG0480020065.01.T01 AT3G15260 33.333 186 103 8 166 347 104 272 2.17e-13 70.9
MsG0480020065.01.T01 AT3G15260 33.333 186 103 8 166 347 104 272 2.17e-13 70.9
MsG0480020065.01.T01 AT4G28400 37.908 153 77 9 169 320 104 239 2.59e-13 70.1
MsG0480020065.01.T01 AT1G22280 31.863 204 115 8 167 369 106 286 3.54e-13 70.5
MsG0480020065.01.T01 AT1G22280 31.863 204 115 8 167 369 100 280 3.77e-13 70.1
MsG0480020065.01.T01 AT1G18030 25.792 221 125 6 167 369 149 348 1.01e-12 69.7
MsG0480020065.01.T01 AT3G62260 28.409 264 130 9 96 347 27 243 5.25e-12 67.0
MsG0480020065.01.T01 AT3G62260 28.309 272 132 10 90 347 110 332 6.94e-12 67.4
MsG0480020065.01.T01 AT5G06750 25.984 254 154 9 153 374 30 281 7.48e-12 66.6
MsG0480020065.01.T01 AT3G62260 28.309 272 132 10 90 347 111 333 7.69e-12 67.4
MsG0480020065.01.T01 AT1G34750 31.792 173 96 9 159 329 93 245 1.42e-11 65.1
MsG0480020065.01.T01 AT1G07160 28.502 207 130 5 164 370 188 376 1.58e-11 66.2
MsG0480020065.01.T01 AT3G17250 24.911 281 158 10 96 368 158 393 2.11e-11 66.2
MsG0480020065.01.T01 AT1G48040 27.344 256 128 10 96 341 116 323 2.21e-11 65.9
MsG0480020065.01.T01 AT3G51470 25.735 272 134 10 70 330 76 290 2.97e-11 65.5
MsG0480020065.01.T01 AT2G40860 27.419 248 145 8 141 380 340 560 3.34e-11 65.9
MsG0480020065.01.T01 AT2G40860 28.899 218 128 7 141 350 438 636 3.47e-11 65.9
MsG0480020065.01.T01 AT2G40860 27.419 248 145 8 141 380 438 658 4.22e-11 65.9
MsG0480020065.01.T01 AT3G51470 25.556 270 137 9 70 330 32 246 4.44e-11 64.3

Find 130 sgRNAs with CRISPR-Local

Find 309 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGTAAAATTGCTTTCATTT+TGG 0.208933 4:-33182322 MsG0480020065.01.T01:CDS
AATCTCTTCATGGGATATAT+TGG 0.215176 4:-33181981 MsG0480020065.01.T01:CDS
CATGGAGTCATTGCTGTCTT+TGG 0.215963 4:+33181935 None:intergenic
GTTGTAAAGTAACTTATATT+TGG 0.272280 4:-33182978 MsG0480020065.01.T01:five_prime_UTR
ACCATTCAGAGCAACCATTC+TGG 0.300542 4:-33179899 MsG0480020065.01.T01:CDS
ATCTCTTCATGGGATATATT+GGG 0.314474 4:-33181980 MsG0480020065.01.T01:CDS
AAACTCGAAGTGGTTTGATT+TGG 0.316314 4:-33179514 MsG0480020065.01.T01:three_prime_UTR
AACTCGAAGTGGTTTGATTT+GGG 0.333922 4:-33179513 MsG0480020065.01.T01:three_prime_UTR
CTACAGAAGCAGTCTAGATT+TGG 0.335148 4:+33182125 None:intergenic
TGATTTGGGTAATTAGTTTA+CGG 0.341139 4:-33179499 MsG0480020065.01.T01:three_prime_UTR
CCAGGGTTCAAATCTCTTCA+TGG 0.346038 4:-33181991 MsG0480020065.01.T01:intron
AGAATCAGATTATGATGAAC+AGG 0.348246 4:-33179936 MsG0480020065.01.T01:CDS
AATGACCCACTTGGCAAATC+AGG 0.352742 4:+33181882 None:intergenic
ATCATCAGCAGCAAGGATTC+TGG 0.370635 4:-33180056 MsG0480020065.01.T01:CDS
TGCTAGGTAAGGATGATAAT+TGG 0.373974 4:+33182656 None:intergenic
ACCATCTAATGTGTGCATTC+TGG 0.374774 4:-33182840 MsG0480020065.01.T01:five_prime_UTR
TTAGCAATGGCTAGGGCGTT+TGG 0.378040 4:-33181680 MsG0480020065.01.T01:CDS
CTTGAATCTGAGTGTTTACC+AGG 0.382862 4:+33179614 None:intergenic
TTCATTGTTCTTGCGTCAGA+TGG 0.392602 4:-33181581 MsG0480020065.01.T01:CDS
GATTTCTGCTTGAAGGAGTA+TGG 0.392742 4:-33181656 MsG0480020065.01.T01:CDS
AGATCAAAACTGGTTAGGTT+TGG 0.408331 4:-33179741 MsG0480020065.01.T01:CDS
GATCTTTCTTCAGAAAATCT+AGG 0.410352 4:+33179683 None:intergenic
TGTCCATCATCTGATTCAAC+TGG 0.411905 4:+33179872 None:intergenic
CTTCAGAAAATCTAGGAAGT+TGG 0.412133 4:+33179690 None:intergenic
GTTTGGAGATTTCTGCTTGA+AGG 0.422853 4:-33181663 MsG0480020065.01.T01:CDS
TCCAGAATGCACACATTAGA+TGG 0.423003 4:+33182839 None:intergenic
CTCTTGAATCGAAACAAAAT+AGG 0.424477 4:-33182295 MsG0480020065.01.T01:CDS
AGCAGCCGGTGAGAAAATTC+AGG 0.426271 4:+33181620 None:intergenic
TTTCACTAATGGAAAGAGTC+GGG 0.431687 4:-33182629 MsG0480020065.01.T01:CDS
CCATTCAGAGCAACCATTCT+GGG 0.439997 4:-33179898 MsG0480020065.01.T01:CDS
GGTGAAGATCAAAACTGGTT+AGG 0.440345 4:-33179746 MsG0480020065.01.T01:CDS
CCCAGAATGGTTGCTCTGAA+TGG 0.442295 4:+33179898 None:intergenic
TGGGGATTCTCGAGCAATCA+TGG 0.443019 4:-33181961 MsG0480020065.01.T01:CDS
ACCACAAAATATCGTATCTT+CGG 0.448145 4:+33182406 None:intergenic
ATTCAACTGGATTCCCAGAA+TGG 0.448330 4:+33179885 None:intergenic
GGGTCGCAAGGGAATTAATC+AGG 0.449317 4:-33182584 MsG0480020065.01.T01:CDS
CGTGAGATCTGTAGTGGATA+GGG 0.451245 4:-33182881 MsG0480020065.01.T01:five_prime_UTR
TGCTTAGAAATTTGTTTCTG+TGG 0.453557 4:-33182727 MsG0480020065.01.T01:CDS
TTCGTGCATATTTACACAGC+AGG 0.465091 4:-33182605 MsG0480020065.01.T01:CDS
CATCAGGTGAAGATCAAAAC+TGG 0.468748 4:-33179751 MsG0480020065.01.T01:CDS
GTTGAAGATGAAGCAGCATC+AGG 0.478334 4:-33179767 MsG0480020065.01.T01:CDS
GTAAAGTTCCTTCTCAAAGA+TGG 0.483162 4:+33179839 None:intergenic
ATTGAACATGTTAGATCCGC+GGG 0.484081 4:+33179469 None:intergenic
TCTGGTAAATTCAGCTGCTC+GGG 0.485878 4:-33180038 MsG0480020065.01.T01:CDS
AGCCACACCCTAGGAACTTC+AGG 0.487256 4:+33181725 None:intergenic
TTCTGGTAAATTCAGCTGCT+CGG 0.491412 4:-33180039 MsG0480020065.01.T01:CDS
TAAATTCAGCTGCTCGGGAA+TGG 0.495611 4:-33180033 MsG0480020065.01.T01:CDS
AACCCTGGTGCGTCATCAAA+AGG 0.497791 4:+33181701 None:intergenic
AAGATGAGCCTGAAGTTCCT+AGG 0.498159 4:-33181733 MsG0480020065.01.T01:CDS
AATTATCATCCTTACCTAGC+AGG 0.505801 4:-33182654 MsG0480020065.01.T01:CDS
TTCTCAGACTCACCACAGTC+TGG 0.510311 4:+33182239 None:intergenic
ATCTGTGACTGTAGTAAAGC+AGG 0.511946 4:-33182093 MsG0480020065.01.T01:intron
ACGTGAGATCTGTAGTGGAT+AGG 0.512168 4:-33182882 MsG0480020065.01.T01:five_prime_UTR
CAAAACTGGTTAGGTTTGGA+AGG 0.513854 4:-33179737 MsG0480020065.01.T01:CDS
CAGGGTTCAAATCTCTTCAT+GGG 0.514984 4:-33181990 MsG0480020065.01.T01:CDS
ATCGACAGACACTGCTCCGT+TGG 0.516366 4:+33179790 None:intergenic
CACCAGGGTTAGCAATGGCT+AGG 0.517626 4:-33181688 MsG0480020065.01.T01:CDS
AAACCACTTCGAGTTTGTCT+AGG 0.521629 4:+33179521 None:intergenic
GTCGAAGTACTTGTAGCAGC+GGG 0.528583 4:-33182777 MsG0480020065.01.T01:CDS
AGCCTGAAGTTCCTAGGGTG+TGG 0.534994 4:-33181727 MsG0480020065.01.T01:CDS
ATTTACACAGCAGGGTCGCA+AGG 0.535677 4:-33182596 MsG0480020065.01.T01:CDS
TCATTGTTCTTGCGTCAGAT+GGG 0.536426 4:-33181580 MsG0480020065.01.T01:CDS
AAACAAATTTCTAAGCAAGA+TGG 0.538040 4:+33182733 None:intergenic
AGTGAAAATCCTGCTAGGTA+AGG 0.538054 4:+33182645 None:intergenic
CTTGAATTTCTTGCTTCATG+AGG 0.542683 4:-33179655 MsG0480020065.01.T01:exon
CAGACAAAACTTGCTTCAAA+CGG 0.544074 4:-33182271 MsG0480020065.01.T01:CDS
AAATACTTCTTCAAAATCCG+TGG 0.545645 4:+33183013 None:intergenic
TGTGGAGTTCAGTTTATCCT+CGG 0.553472 4:+33182205 None:intergenic
ACTTGTAGCAGCGGGAGCAA+TGG 0.557749 4:-33182769 MsG0480020065.01.T01:CDS
GATCTCTGTCTGTGAGCAGC+CGG 0.558467 4:+33181606 None:intergenic
CAAAGACAGCAATGACTCCA+TGG 0.558918 4:-33181934 MsG0480020065.01.T01:CDS
AATCAAGCAGTGCAAGGGTA+GGG 0.560069 4:-33181768 MsG0480020065.01.T01:CDS
AATGAAGTAATGCTTGCTGC+AGG 0.560412 4:+33183872 None:intergenic
AATCTAGACTGCTTCTGTAG+TGG 0.563578 4:-33182122 MsG0480020065.01.T01:CDS
ATCTTGTTGCGCGTAAAGTG+AGG 0.564465 4:-33182355 MsG0480020065.01.T01:CDS
GGGAATTAATCAGGATGCCA+TGG 0.565143 4:-33182575 MsG0480020065.01.T01:CDS
AGACCATGGACAAAGAGCTT+AGG 0.566360 4:-33182154 MsG0480020065.01.T01:CDS
AATCCAGTTGAATCAGATGA+TGG 0.567117 4:-33179875 MsG0480020065.01.T01:CDS
TCTCTTCATGGGATATATTG+GGG 0.568937 4:-33181979 MsG0480020065.01.T01:CDS
ACCAGGGTTAGCAATGGCTA+GGG 0.571256 4:-33181687 MsG0480020065.01.T01:CDS
GGAAAGAATCAAGCAGTGCA+AGG 0.573684 4:-33181774 MsG0480020065.01.T01:CDS
AAAACTGGTTAGGTTTGGAA+GGG 0.578580 4:-33179736 MsG0480020065.01.T01:CDS
AATTGAACATGTTAGATCCG+CGG 0.578821 4:+33179468 None:intergenic
AGATGAGCCTGAAGTTCCTA+GGG 0.581249 4:-33181732 MsG0480020065.01.T01:CDS
AGACCTAAGCTCTTTGTCCA+TGG 0.584175 4:+33182151 None:intergenic
TAACTGTTTATTGTAGTACC+TGG 0.586555 4:-33179632 MsG0480020065.01.T01:three_prime_UTR
AGTCGAAGTACTTGTAGCAG+CGG 0.586885 4:-33182778 MsG0480020065.01.T01:CDS
GGGGATTCTCGAGCAATCAT+GGG 0.587725 4:-33181960 MsG0480020065.01.T01:CDS
CCATTAGTGAAAATCCTGCT+AGG 0.589167 4:+33182640 None:intergenic
TTTGATGGTCATGGTCCACA+AGG 0.594402 4:-33182380 MsG0480020065.01.T01:CDS
ATCAGGATGCCATGGTTGTG+TGG 0.596198 4:-33182567 MsG0480020065.01.T01:CDS
CATTGTTCTTGCGTCAGATG+GGG 0.596634 4:-33181579 MsG0480020065.01.T01:intron
GAATCAAGCAGTGCAAGGGT+AGG 0.597342 4:-33181769 MsG0480020065.01.T01:CDS
GAAAGAATCAAGCAGTGCAA+GGG 0.598000 4:-33181773 MsG0480020065.01.T01:CDS
AAACCTAGACAAACTCGAAG+TGG 0.598952 4:-33179524 MsG0480020065.01.T01:three_prime_UTR
GGTGGTTGAGATAGTATCAT+CGG 0.598952 4:-33180089 MsG0480020065.01.T01:CDS
AATCGGAGCCATCTTTGAGA+AGG 0.600237 4:-33179847 MsG0480020065.01.T01:CDS
CTTGCTGCTGATGATCGTGT+TGG 0.601429 4:+33180064 None:intergenic
TCCGTTCAAATAGCGTCCCA+CGG 0.601606 4:-33183030 MsG0480020065.01.T01:five_prime_UTR
TCAAAAGGCAGCCACACCCT+AGG 0.606675 4:+33181716 None:intergenic
GCCCTAGCCATTGCTAACCC+TGG 0.606931 4:+33181686 None:intergenic
AAACTGGTTAGGTTTGGAAG+GGG 0.609381 4:-33179735 MsG0480020065.01.T01:CDS
AGGATAAACTGAACTCCACA+TGG 0.618329 4:-33182202 MsG0480020065.01.T01:CDS
TTCACTAATGGAAAGAGTCG+GGG 0.619236 4:-33182628 MsG0480020065.01.T01:CDS
TCTGTGGACAAAAGAGAGCA+AGG 0.624356 4:-33182711 MsG0480020065.01.T01:CDS
TTTACACAGCAGGGTCGCAA+GGG 0.624371 4:-33182595 MsG0480020065.01.T01:CDS
TGAGAAGGATTGTTCTGCCG+AGG 0.624451 4:-33182222 MsG0480020065.01.T01:CDS
TCTTGTTGCGCGTAAAGTGA+GGG 0.625856 4:-33182354 MsG0480020065.01.T01:CDS
TATGAAAGCTTCTCTCCATG+TGG 0.626211 4:+33182187 None:intergenic
AGTCAACTGAATTGCCACCA+TGG 0.629372 4:+33181917 None:intergenic
TCCGTGGGACGCTATTTGAA+CGG 0.632474 4:+33183029 None:intergenic
TCGTGCATATTTACACAGCA+GGG 0.634119 4:-33182604 MsG0480020065.01.T01:CDS
ACTGGTGAATTAGGCTACCA+AGG 0.634135 4:+33179550 None:intergenic
TCAGGATGCCATGGTTGTGT+GGG 0.634495 4:-33182566 MsG0480020065.01.T01:CDS
AATACTTCTTCAAAATCCGT+GGG 0.635830 4:+33183014 None:intergenic
AGACTGTGGTGAGTCTGAGA+AGG 0.641591 4:-33182237 MsG0480020065.01.T01:CDS
TTGGTTGGGAATAGGAGAAG+CGG 0.643491 4:-33181795 MsG0480020065.01.T01:intron
ACTTACTTCCCACACAACCA+TGG 0.645722 4:+33182558 None:intergenic
CATAAAAGCATACAAGACCA+TGG 0.649143 4:-33182168 MsG0480020065.01.T01:CDS
TGCGAACGTGAGATCTGTAG+TGG 0.658028 4:-33182887 MsG0480020065.01.T01:five_prime_UTR
TCAGAAGAAAACGAGACCAA+CGG 0.665927 4:-33179806 MsG0480020065.01.T01:CDS
AGTTTACGGTTTCAAACCCG+CGG 0.666192 4:-33179485 MsG0480020065.01.T01:three_prime_UTR
GAATCAGATTATGATGAACA+GGG 0.666739 4:-33179935 MsG0480020065.01.T01:CDS
TGACGCACCAGGGTTAGCAA+TGG 0.672958 4:-33181693 MsG0480020065.01.T01:CDS
CAACACGATCATCAGCAGCA+AGG 0.675811 4:-33180063 MsG0480020065.01.T01:CDS
ATGAAGTAATGCTTGCTGCA+GGG 0.684169 4:+33183873 None:intergenic
CGCGCAACAAGATGACCTTG+TGG 0.685405 4:+33182365 None:intergenic
AGAATGCACACATTAGATGG+TGG 0.692409 4:+33182842 None:intergenic
CGGAACATAACACCAGACTG+TGG 0.709411 4:-33182251 MsG0480020065.01.T01:CDS
AGACAGCAATGACTCCATGG+TGG 0.756556 4:-33181931 MsG0480020065.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CAAATTATTTAAAAAATAGA+TGG + Chr4:33182429-33182448 None:intergenic 10.0%
!!! ATTTTTTTTTTTGGTTTTTT+TGG - Chr4:33183898-33183917 MsG0480020065.01.T01:five_prime_UTR 10.0%
!!! TTTTCTATTTTTTATTTTTC+TGG - Chr4:33181842-33181861 MsG0480020065.01.T01:intron 10.0%
!! ATTAATATCATGTTTCAAAT+GGG + Chr4:33180010-33180029 None:intergenic 15.0%
!! CAAAAATACAGATAATAATT+AGG + Chr4:33180907-33180926 None:intergenic 15.0%
!! GAAATTAAGAAAAACATAAA+AGG + Chr4:33181327-33181346 None:intergenic 15.0%
!! GATTGTATATTAACTATTAT+TGG - Chr4:33180257-33180276 MsG0480020065.01.T01:intron 15.0%
!! TATACTAAAAACTATGATAA+GGG + Chr4:33183149-33183168 None:intergenic 15.0%
!! TATTAATATCATGTTTCAAA+TGG + Chr4:33180011-33180030 None:intergenic 15.0%
!! TTATACTAAAAACTATGATA+AGG + Chr4:33183150-33183169 None:intergenic 15.0%
!!! ACATGTTCAATTTTTTTTTT+TGG - Chr4:33183889-33183908 MsG0480020065.01.T01:five_prime_UTR 15.0%
!!! ATTATTATCTGTATTTTTGT+AGG - Chr4:33180908-33180927 MsG0480020065.01.T01:intron 15.0%
!!! ATTTTTTTTTTTTGTTGAAG+TGG - Chr4:33183759-33183778 MsG0480020065.01.T01:intron 15.0%
!! AAATCATATAAATTCGACTT+AGG + Chr4:33182775-33182794 None:intergenic 20.0%
!! AACAAAAAACAAGAAGAAAA+AGG + Chr4:33179605-33179624 None:intergenic 20.0%
!! AACATGATATTAATAAGACA+TGG - Chr4:33180016-33180035 MsG0480020065.01.T01:CDS 20.0%
!! ATAACTAAATATCAAAGCAA+AGG + Chr4:33179928-33179947 None:intergenic 20.0%
!! ATGTTAATAGTAATGAATTG+TGG - Chr4:33181966-33181985 MsG0480020065.01.T01:CDS 20.0%
!! CAAAACATTGGAAAAAAATT+CGG - Chr4:33182525-33182544 MsG0480020065.01.T01:intron 20.0%
!! CACATACTATATTGTATAAA+AGG + Chr4:33179702-33179721 None:intergenic 20.0%
!! GATTAAATAGTACAAAACAT+TGG - Chr4:33182513-33182532 MsG0480020065.01.T01:intron 20.0%
!! GTTGTAAAGTAACTTATATT+TGG - Chr4:33180368-33180387 MsG0480020065.01.T01:intron 20.0%
!! TAAAAACTAAACCAAAACAA+AGG + Chr4:33180070-33180089 None:intergenic 20.0%
!! TGGAACTGAAAAAAATAAAT+GGG - Chr4:33180526-33180545 MsG0480020065.01.T01:intron 20.0%
!! TTAGTTATTTGAGCTATATA+AGG - Chr4:33179940-33179959 MsG0480020065.01.T01:CDS 20.0%
!! TTTCTAACTTAATTCCAATT+TGG - Chr4:33181532-33181551 MsG0480020065.01.T01:intron 20.0%
!!! AATTTGTAAATAACTTGTGT+AGG - Chr4:33183109-33183128 MsG0480020065.01.T01:intron 20.0%
!!! AGGATCTATTTTTATTGAAA+AGG - Chr4:33179960-33179979 MsG0480020065.01.T01:CDS 20.0%
!!! ATGGTAAGATTATTTTTTCA+TGG + Chr4:33181900-33181919 None:intergenic 20.0%
!!! CTTCTTGTTTTTTGTTTTTA+CGG - Chr4:33179609-33179628 MsG0480020065.01.T01:three_prime_UTR 20.0%
!!! TCTCTTTTTAAGTTATTTGA+GGG - Chr4:33180853-33180872 MsG0480020065.01.T01:intron 20.0%
!!! TTTATTTTACATTTGGCAAA+TGG - Chr4:33180222-33180241 MsG0480020065.01.T01:intron 20.0%
! AAACAAATTTCTAAGCAAGA+TGG + Chr4:33180616-33180635 None:intergenic 25.0%
! AAATAACAACCAATCATAGA+AGG - Chr4:33182318-33182337 MsG0480020065.01.T01:CDS 25.0%
! AACTTAATTCCAATTTGGTT+GGG - Chr4:33181537-33181556 MsG0480020065.01.T01:intron 25.0%
! AATAACAACCAATCATAGAA+GGG - Chr4:33182319-33182338 MsG0480020065.01.T01:CDS 25.0%
! ATATTCTTTCTTCACATGTT+GGG - Chr4:33180169-33180188 MsG0480020065.01.T01:intron 25.0%
! ATTGGAATTAAGTTAGAAAC+AGG + Chr4:33181531-33181550 None:intergenic 25.0%
! CGTCAGAGAATAAATAATAT+TGG + Chr4:33181493-33181512 None:intergenic 25.0%
! CTGGAACTGAAAAAAATAAA+TGG - Chr4:33180525-33180544 MsG0480020065.01.T01:intron 25.0%
! CTTAATTTCTTAACTTACCA+GGG - Chr4:33181338-33181357 MsG0480020065.01.T01:intron 25.0%
! GTAAGCAATGAAAATTTCAA+TGG - Chr4:33179526-33179545 MsG0480020065.01.T01:three_prime_UTR 25.0%
! GTTATCAAGTAATTTAGACT+CGG - Chr4:33182629-33182648 MsG0480020065.01.T01:CDS 25.0%
! TAACTTAATTCCAATTTGGT+TGG - Chr4:33181536-33181555 MsG0480020065.01.T01:intron 25.0%
! TATATTCTTTCTTCACATGT+TGG - Chr4:33180168-33180187 MsG0480020065.01.T01:intron 25.0%
! TATGTTCATGTTCATCTTAT+TGG - Chr4:33180810-33180829 MsG0480020065.01.T01:intron 25.0%
! TCCATATTTCATATATTTGC+AGG + Chr4:33182670-33182689 None:intergenic 25.0%
! TCTTAATTTCTTAACTTACC+AGG - Chr4:33181337-33181356 MsG0480020065.01.T01:intron 25.0%
! TTATTGCTCTAACTTTGTAA+AGG - Chr4:33179504-33179523 MsG0480020065.01.T01:three_prime_UTR 25.0%
!! ATCAAAAATTTCAAGTAACC+TGG - Chr4:33182491-33182510 MsG0480020065.01.T01:intron 25.0%
!! CAAAATGAAAGCAATTTTAC+TGG + Chr4:33181026-33181045 None:intergenic 25.0%
!! CAGTAAAATTGCTTTCATTT+TGG - Chr4:33181024-33181043 MsG0480020065.01.T01:intron 25.0%
!! TATGAAAATCAACTTGTTTC+TGG - Chr4:33182218-33182237 MsG0480020065.01.T01:CDS 25.0%
!! TGATTTGGGTAATTAGTTTA+CGG - Chr4:33183847-33183866 MsG0480020065.01.T01:intron 25.0%
!! TGTTTTGTACTATTTAATCC+AGG + Chr4:33182512-33182531 None:intergenic 25.0%
!! TTGGACTTAAAGAGAATTTT+TGG - Chr4:33180387-33180406 MsG0480020065.01.T01:intron 25.0%
!! TTTGGGGTTGTTTATAATTT+AGG - Chr4:33179644-33179663 MsG0480020065.01.T01:three_prime_UTR 25.0%
!!! AGAAACAAGTTGATTTTCAT+AGG + Chr4:33182219-33182238 None:intergenic 25.0%
!!! ATATTTTGTGGTGTTTTTGA+TGG - Chr4:33180951-33180970 MsG0480020065.01.T01:intron 25.0%
!!! CTCTCTTTTTAAGTTATTTG+AGG - Chr4:33180852-33180871 MsG0480020065.01.T01:intron 25.0%
!!! CTTATTTTTGGATGGTAAAA+TGG - Chr4:33183383-33183402 MsG0480020065.01.T01:intron 25.0%
!!! GAAACAAGTTGATTTTCATA+GGG + Chr4:33182218-33182237 None:intergenic 25.0%
!!! TAATGCTTTTGGTTCTAATA+TGG - Chr4:33182555-33182574 MsG0480020065.01.T01:intron 25.0%
!!! TACGGTTGTTTTTTAGTTTT+GGG - Chr4:33179627-33179646 MsG0480020065.01.T01:three_prime_UTR 25.0%
!!! TGTTTTAAGCATTAGCAAAT+AGG - Chr4:33182396-33182415 MsG0480020065.01.T01:CDS 25.0%
!!! TTACGGTTGTTTTTTAGTTT+TGG - Chr4:33179626-33179645 MsG0480020065.01.T01:three_prime_UTR 25.0%
!!! TTTATTTTTCTGGTGTGAAT+CGG - Chr4:33181852-33181871 MsG0480020065.01.T01:intron 25.0%
AAATACTTCTTCAAAATCCG+TGG + Chr4:33180336-33180355 None:intergenic 30.0%
AAGAAGAAAAAGGAGAAAAG+AGG + Chr4:33179595-33179614 None:intergenic 30.0%
AAGTTATTCTACTCAATGGT+TGG + Chr4:33182045-33182064 None:intergenic 30.0%
AATACTTCTTCAAAATCCGT+GGG + Chr4:33180335-33180354 None:intergenic 30.0%
AATCAAAAACGTTAGACACA+AGG + Chr4:33182909-33182928 None:intergenic 30.0%
AATCTCTTCATGGGATATAT+TGG - Chr4:33181365-33181384 MsG0480020065.01.T01:intron 30.0%
ACCACAAAATATCGTATCTT+CGG + Chr4:33180943-33180962 None:intergenic 30.0%
AGAATCAGATTATGATGAAC+AGG - Chr4:33183410-33183429 MsG0480020065.01.T01:intron 30.0%
ATCTCTTCATGGGATATATT+GGG - Chr4:33181366-33181385 MsG0480020065.01.T01:intron 30.0%
CTCTTGAATCGAAACAAAAT+AGG - Chr4:33181051-33181070 MsG0480020065.01.T01:intron 30.0%
GAACAAGTTATTCTACTCAA+TGG + Chr4:33182049-33182068 None:intergenic 30.0%
GAATCAGATTATGATGAACA+GGG - Chr4:33183411-33183430 MsG0480020065.01.T01:intron 30.0%
GATCTTTCTTCAGAAAATCT+AGG + Chr4:33183666-33183685 None:intergenic 30.0%
GCCTGCAAATATATGAAATA+TGG - Chr4:33182666-33182685 MsG0480020065.01.T01:CDS 30.0%
TAACTGTTTATTGTAGTACC+TGG - Chr4:33183714-33183733 MsG0480020065.01.T01:intron 30.0%
TCTGAACAAGAATGTTTCAT+AGG - Chr4:33179789-33179808 MsG0480020065.01.T01:CDS 30.0%
! CTTGGTATTTTTCTAGGTTT+GGG - Chr4:33183215-33183234 MsG0480020065.01.T01:intron 30.0%
! GAAAGGAATTAGACTTTTCA+AGG - Chr4:33182585-33182604 MsG0480020065.01.T01:CDS 30.0%
! GATTCTCTTGGTATTTTTCT+AGG - Chr4:33183209-33183228 MsG0480020065.01.T01:intron 30.0%
! GTATCTGATTTTCAATGAGT+GGG - Chr4:33182295-33182314 MsG0480020065.01.T01:CDS 30.0%
! TCTTGGTATTTTTCTAGGTT+TGG - Chr4:33183214-33183233 MsG0480020065.01.T01:intron 30.0%
! TTTTCACTAATGGAAAGAGT+CGG - Chr4:33180716-33180735 MsG0480020065.01.T01:intron 30.0%
!! ATCAGATGATGGACAAAAAT+CGG - Chr4:33183482-33183501 MsG0480020065.01.T01:intron 30.0%
!! TGCTTAGAAATTTGTTTCTG+TGG - Chr4:33180619-33180638 MsG0480020065.01.T01:intron 30.0%
!! TGTGTCTAACGTTTTTGATT+TGG - Chr4:33182909-33182928 MsG0480020065.01.T01:five_prime_UTR 30.0%
!!! ACGGTTGTTTTTTAGTTTTG+GGG - Chr4:33179628-33179647 MsG0480020065.01.T01:three_prime_UTR 30.0%
!!! GTGTCTAACGTTTTTGATTT+GGG - Chr4:33182910-33182929 MsG0480020065.01.T01:five_prime_UTR 30.0%
!!! TTTTGGTTCTAATATGGACT+CGG - Chr4:33182561-33182580 MsG0480020065.01.T01:intron 30.0%
!!! TTTTTTGTGTGTTTTTCCTC+CGG - Chr4:33179730-33179749 MsG0480020065.01.T01:CDS 30.0%
AAAACTGGTTAGGTTTGGAA+GGG - Chr4:33183610-33183629 MsG0480020065.01.T01:intron 35.0%
AAACTCGAAGTGGTTTGATT+TGG - Chr4:33183832-33183851 MsG0480020065.01.T01:intron 35.0%
AACATGTCCTGTTTGTCAAT+TGG - Chr4:33182089-33182108 MsG0480020065.01.T01:intron 35.0%
AACATTAACCATATGCTGGT+AGG - Chr4:33181992-33182011 MsG0480020065.01.T01:intron 35.0%
AATCCAGTTGAATCAGATGA+TGG - Chr4:33183471-33183490 MsG0480020065.01.T01:intron 35.0%
AATTATCATCCTTACCTAGC+AGG - Chr4:33180692-33180711 MsG0480020065.01.T01:intron 35.0%
AATTGAACATGTTAGATCCG+CGG + Chr4:33183881-33183900 None:intergenic 35.0%
ACCAGCATATGGTTAATGTT+AGG + Chr4:33181992-33182011 None:intergenic 35.0%
AGATCAAAACTGGTTAGGTT+TGG - Chr4:33183605-33183624 MsG0480020065.01.T01:intron 35.0%
AGTGAATGTTGGAAGCTTTA+GGG + Chr4:33183179-33183198 None:intergenic 35.0%
ATTCCAATTTGGTTGGGAAT+AGG - Chr4:33181543-33181562 MsG0480020065.01.T01:intron 35.0%
CAGTTATCATCAGTGAATGT+TGG + Chr4:33183190-33183209 None:intergenic 35.0%
CGTAGAAACATAGTCAAATG+TGG - Chr4:33182956-33182975 MsG0480020065.01.T01:five_prime_UTR 35.0%
CTTCAGAAAATCTAGGAAGT+TGG + Chr4:33183659-33183678 None:intergenic 35.0%
CTTGAATTTCTTGCTTCATG+AGG - Chr4:33183691-33183710 MsG0480020065.01.T01:intron 35.0%
GTAAAGTTCCTTCTCAAAGA+TGG + Chr4:33183510-33183529 None:intergenic 35.0%
GTAGGAAGGAAACTAATAAG+TGG - Chr4:33182010-33182029 MsG0480020065.01.T01:intron 35.0%
TAAGTTATTTGAGGGAGACT+TGG - Chr4:33180861-33180880 MsG0480020065.01.T01:intron 35.0%
TCTCTTCATGGGATATATTG+GGG - Chr4:33181367-33181386 MsG0480020065.01.T01:intron 35.0%
TGCTAGGTAAGGATGATAAT+TGG + Chr4:33180693-33180712 None:intergenic 35.0%
TGTATCCTCATCAATTAGCA+TGG + Chr4:33182741-33182760 None:intergenic 35.0%
TGTCATTGAGTGACATTGTT+GGG - Chr4:33182857-33182876 MsG0480020065.01.T01:five_prime_UTR 35.0%
TGTTTCATAGGAATCGAACT+CGG - Chr4:33179801-33179820 MsG0480020065.01.T01:CDS 35.0%
TTCAATTTCACAGCTAGACA+TGG + Chr4:33181919-33181938 None:intergenic 35.0%
TTGCACTTGCATGTTGTAAA+AGG + Chr4:33182693-33182712 None:intergenic 35.0%
TTGTCATTGAGTGACATTGT+TGG - Chr4:33182856-33182875 MsG0480020065.01.T01:five_prime_UTR 35.0%
TTTAGAAACATGCCTTTGCT+GGG - Chr4:33182245-33182264 MsG0480020065.01.T01:CDS 35.0%
TTTCACTAATGGAAAGAGTC+GGG - Chr4:33180717-33180736 MsG0480020065.01.T01:intron 35.0%
! AACTCGAAGTGGTTTGATTT+GGG - Chr4:33183833-33183852 MsG0480020065.01.T01:intron 35.0%
! AGGTTTTCTACTGGTGAATT+AGG + Chr4:33183808-33183827 None:intergenic 35.0%
! AGTTTGTCTAGGTTTTCTAC+TGG + Chr4:33183817-33183836 None:intergenic 35.0%
! CAGACAAAACTTGCTTCAAA+CGG - Chr4:33181075-33181094 MsG0480020065.01.T01:intron 35.0%
! CATAAAAGCATACAAGACCA+TGG - Chr4:33181178-33181197 MsG0480020065.01.T01:intron 35.0%
! CTATACCTGAATTTTCTCAC+CGG - Chr4:33181721-33181740 MsG0480020065.01.T01:CDS 35.0%
! CTGATGATAACTGATTCTCT+TGG - Chr4:33183197-33183216 MsG0480020065.01.T01:intron 35.0%
! GGTATCTGATTTTCAATGAG+TGG - Chr4:33182294-33182313 MsG0480020065.01.T01:CDS 35.0%
! GTCAAATGTGGTGTTAATTG+TGG - Chr4:33182968-33182987 MsG0480020065.01.T01:five_prime_UTR 35.0%
! TCCGAAGATACGATATTTTG+TGG - Chr4:33180939-33180958 MsG0480020065.01.T01:intron 35.0%
! TCGGTACATGTTAATGCTTT+TGG - Chr4:33182544-33182563 MsG0480020065.01.T01:intron 35.0%
! TGGTAATCTGAAATTCGGTT+TGG - Chr4:33179754-33179773 MsG0480020065.01.T01:CDS 35.0%
!! GAATTAGACTTTTCAAGGCT+AGG - Chr4:33182590-33182609 MsG0480020065.01.T01:CDS 35.0%
!! TAATCTGAAATTCGGTTTGG+AGG - Chr4:33179757-33179776 MsG0480020065.01.T01:CDS 35.0%
!! TCTCTTTCATGCCTTTGTTT+TGG - Chr4:33180056-33180075 MsG0480020065.01.T01:CDS 35.0%
!! TGCTGTAGTGTGCTTATTTT+TGG - Chr4:33183371-33183390 MsG0480020065.01.T01:intron 35.0%
!! TTGGGATGTTTTAAGCAATG+AGG - Chr4:33183233-33183252 MsG0480020065.01.T01:intron 35.0%
!!! ACACGGACATGGTTTTAAAA+AGG + Chr4:33183046-33183065 None:intergenic 35.0%
!!! AGTCATCCATTTTTGAAGTC+GGG + Chr4:33183350-33183369 None:intergenic 35.0%
!!! CACGGACATGGTTTTAAAAA+GGG + Chr4:33183045-33183064 None:intergenic 35.0%
!!! CAGTCATCCATTTTTGAAGT+CGG + Chr4:33183351-33183370 None:intergenic 35.0%
!!! GTAGTGTGCTTATTTTTGGA+TGG - Chr4:33183375-33183394 MsG0480020065.01.T01:intron 35.0%
AAACCTAGACAAACTCGAAG+TGG - Chr4:33183822-33183841 MsG0480020065.01.T01:intron 40.0%
AAACTGGTTAGGTTTGGAAG+GGG - Chr4:33183611-33183630 MsG0480020065.01.T01:intron 40.0%
AATCTAGACTGCTTCTGTAG+TGG - Chr4:33181224-33181243 MsG0480020065.01.T01:intron 40.0%
AATTTCAGATTACCAACCGG+AGG + Chr4:33179749-33179768 None:intergenic 40.0%
ACCATCTAATGTGTGCATTC+TGG - Chr4:33180506-33180525 MsG0480020065.01.T01:intron 40.0%
AGAATGCACACATTAGATGG+TGG + Chr4:33180507-33180526 None:intergenic 40.0%
AGCTGAACACAAGAAAACAG+TGG + Chr4:33180286-33180305 None:intergenic 40.0%
AGGATAAACTGAACTCCACA+TGG - Chr4:33181144-33181163 MsG0480020065.01.T01:intron 40.0%
AGTGAAAATCCTGCTAGGTA+AGG + Chr4:33180704-33180723 None:intergenic 40.0%
ATCTGTGACTGTAGTAAAGC+AGG - Chr4:33181253-33181272 MsG0480020065.01.T01:intron 40.0%
ATTCAACTGGATTCCCAGAA+TGG + Chr4:33183464-33183483 None:intergenic 40.0%
ATTGAACATGTTAGATCCGC+GGG + Chr4:33183880-33183899 None:intergenic 40.0%
CAAAACTGGTTAGGTTTGGA+AGG - Chr4:33183609-33183628 MsG0480020065.01.T01:intron 40.0%
CAAGTACCCGACTTCAAAAA+TGG - Chr4:33183341-33183360 MsG0480020065.01.T01:intron 40.0%
CAAGTTTAGGTCTGTGTGAA+AGG - Chr4:33182467-33182486 MsG0480020065.01.T01:intron 40.0%
CAGGGTTCAAATCTCTTCAT+GGG - Chr4:33181356-33181375 MsG0480020065.01.T01:intron 40.0%
CAGTGAATGTTGGAAGCTTT+AGG + Chr4:33183180-33183199 None:intergenic 40.0%
CATCAGGTGAAGATCAAAAC+TGG - Chr4:33183595-33183614 MsG0480020065.01.T01:intron 40.0%
CCATTAGTGAAAATCCTGCT+AGG + Chr4:33180709-33180728 None:intergenic 40.0%
CCGAATTTCAGATTACCAAC+CGG + Chr4:33179752-33179771 None:intergenic 40.0%
CTACAGAAGCAGTCTAGATT+TGG + Chr4:33181224-33181243 None:intergenic 40.0%
CTGATATTTCAACACAACGC+TGG - Chr4:33182273-33182292 MsG0480020065.01.T01:CDS 40.0%
CTTGAATCTGAGTGTTTACC+AGG + Chr4:33183735-33183754 None:intergenic 40.0%
GAAAGAATCAAGCAGTGCAA+GGG - Chr4:33181573-33181592 MsG0480020065.01.T01:intron 40.0%
GAATGTATCCGTGGAATCTT+AGG - Chr4:33182164-33182183 MsG0480020065.01.T01:CDS 40.0%
GATTTCTGCTTGAAGGAGTA+TGG - Chr4:33181690-33181709 MsG0480020065.01.T01:CDS 40.0%
GCCTAACATTAACCATATGC+TGG - Chr4:33181988-33182007 MsG0480020065.01.T01:CDS 40.0%
GGTGAAGATCAAAACTGGTT+AGG - Chr4:33183600-33183619 MsG0480020065.01.T01:intron 40.0%
GGTGGTTGAGATAGTATCAT+CGG - Chr4:33183257-33183276 MsG0480020065.01.T01:intron 40.0%
GTACCATGCTATCATTGATG+TGG + Chr4:33182806-33182825 None:intergenic 40.0%
GTCATTGAGTGACATTGTTG+GGG - Chr4:33182858-33182877 MsG0480020065.01.T01:five_prime_UTR 40.0%
GTTTCATAGGAATCGAACTC+GGG - Chr4:33179802-33179821 MsG0480020065.01.T01:CDS 40.0%
GTTTGGAGATTTCTGCTTGA+AGG - Chr4:33181683-33181702 MsG0480020065.01.T01:CDS 40.0%
TATGAAAGCTTCTCTCCATG+TGG + Chr4:33181162-33181181 None:intergenic 40.0%
TATTGGCATAATGACCCACT+TGG + Chr4:33181476-33181495 None:intergenic 40.0%
TCAGAAGAAAACGAGACCAA+CGG - Chr4:33183540-33183559 MsG0480020065.01.T01:intron 40.0%
TCATCAATTAGCATGGCAAG+AGG + Chr4:33182734-33182753 None:intergenic 40.0%
TCATTGTTCTTGCGTCAGAT+GGG - Chr4:33181766-33181785 MsG0480020065.01.T01:CDS 40.0%
TCCAGAATGCACACATTAGA+TGG + Chr4:33180510-33180529 None:intergenic 40.0%
TCCGATCACTTGATTAGTGA+CGG - Chr4:33179872-33179891 MsG0480020065.01.T01:CDS 40.0%
TCGAACGATTTGTCCTTAAG+TGG - Chr4:33179830-33179849 MsG0480020065.01.T01:CDS 40.0%
TCGTGCATATTTACACAGCA+GGG - Chr4:33180742-33180761 MsG0480020065.01.T01:intron 40.0%
TCTCCTATTCCCAACCAAAT+TGG + Chr4:33181549-33181568 None:intergenic 40.0%
TCTTGCCATGCTAATTGATG+AGG - Chr4:33182733-33182752 MsG0480020065.01.T01:CDS 40.0%
TGCGTAACACTCTCAAGTTT+AGG - Chr4:33182454-33182473 MsG0480020065.01.T01:intron 40.0%
TGTCCATCATCTGATTCAAC+TGG + Chr4:33183477-33183496 None:intergenic 40.0%
TGTGGAGTTCAGTTTATCCT+CGG + Chr4:33181144-33181163 None:intergenic 40.0%
TTAAAAAGGGACAGAGACTG+TGG + Chr4:33183032-33183051 None:intergenic 40.0%
TTAACCATATGCTGGTAGGA+AGG - Chr4:33181996-33182015 MsG0480020065.01.T01:intron 40.0%
TTCACTAATGGAAAGAGTCG+GGG - Chr4:33180718-33180737 MsG0480020065.01.T01:intron 40.0%
TTCATTGTTCTTGCGTCAGA+TGG - Chr4:33181765-33181784 MsG0480020065.01.T01:CDS 40.0%
TTCGTGCATATTTACACAGC+AGG - Chr4:33180741-33180760 MsG0480020065.01.T01:intron 40.0%
TTCTGGTAAATTCAGCTGCT+CGG - Chr4:33183307-33183326 MsG0480020065.01.T01:intron 40.0%
! AAACCACTTCGAGTTTGTCT+AGG + Chr4:33183828-33183847 None:intergenic 40.0%
! AATGAAGTAATGCTTGCTGC+AGG + Chr4:33179477-33179496 None:intergenic 40.0%
! ACTGTTTTCTTGTGTTCAGC+TGG - Chr4:33180285-33180304 MsG0480020065.01.T01:intron 40.0%
! ATGAAGTAATGCTTGCTGCA+GGG + Chr4:33179476-33179495 None:intergenic 40.0%
! CCTAGCAGGATTTTCACTAA+TGG - Chr4:33180706-33180725 MsG0480020065.01.T01:intron 40.0%
! CTCTGACGAGTATATGCTTT+TGG - Chr4:33181505-33181524 MsG0480020065.01.T01:intron 40.0%
! CTTTAGAAACATGCCTTTGC+TGG - Chr4:33182244-33182263 MsG0480020065.01.T01:CDS 40.0%
! GTGAATGTTGGAAGCTTTAG+GGG + Chr4:33183178-33183197 None:intergenic 40.0%
! TGTGGTGTTAATTGTGGTTG+CGG - Chr4:33182974-33182993 MsG0480020065.01.T01:five_prime_UTR 40.0%
!! CCGGTTGGTAATCTGAAATT+CGG - Chr4:33179749-33179768 MsG0480020065.01.T01:CDS 40.0%
!! GGATGTTTTAAGCAATGAGG+AGG - Chr4:33183236-33183255 MsG0480020065.01.T01:intron 40.0%
!! TCTAATATGGACTCGGTGAA+AGG - Chr4:33182568-33182587 MsG0480020065.01.T01:CDS 40.0%
!! TGGAACATTTTGATGCTCCT+TGG - Chr4:33183779-33183798 MsG0480020065.01.T01:intron 40.0%
!! TGTGGTGTTTTTGATGGTCA+TGG - Chr4:33180957-33180976 MsG0480020065.01.T01:intron 40.0%
!! TGTTTTAAGCAATGAGGAGG+TGG - Chr4:33183239-33183258 MsG0480020065.01.T01:intron 40.0%
AAACATGCCTTTGCTGGGTT+TGG - Chr4:33182250-33182269 MsG0480020065.01.T01:CDS 45.0%
AAGATGAGCCTGAAGTTCCT+AGG - Chr4:33181613-33181632 MsG0480020065.01.T01:CDS 45.0%
AAGCGCATCCCTTCTATGAT+TGG + Chr4:33182330-33182349 None:intergenic 45.0%
AATCAAGCAGTGCAAGGGTA+GGG - Chr4:33181578-33181597 MsG0480020065.01.T01:intron 45.0%
AATGACCCACTTGGCAAATC+AGG + Chr4:33181467-33181486 None:intergenic 45.0%
ACCATTCAGAGCAACCATTC+TGG - Chr4:33183447-33183466 MsG0480020065.01.T01:intron 45.0%
ACTGGTGAATTAGGCTACCA+AGG + Chr4:33183799-33183818 None:intergenic 45.0%
ACTTACTTCCCACACAACCA+TGG + Chr4:33180791-33180810 None:intergenic 45.0%
AGACCATGGACAAAGAGCTT+AGG - Chr4:33181192-33181211 MsG0480020065.01.T01:intron 45.0%
AGACCTAAGCTCTTTGTCCA+TGG + Chr4:33181198-33181217 None:intergenic 45.0%
AGATGAGCCTGAAGTTCCTA+GGG - Chr4:33181614-33181633 MsG0480020065.01.T01:CDS 45.0%
AGTCAACTGAATTGCCACCA+TGG + Chr4:33181432-33181451 None:intergenic 45.0%
AGTTTACGGTTTCAAACCCG+CGG - Chr4:33183861-33183880 MsG0480020065.01.T01:five_prime_UTR 45.0%
ATATCAGCCAAACCCAGCAA+AGG + Chr4:33182260-33182279 None:intergenic 45.0%
ATCAAGTGATCGGACTCAAC+TGG + Chr4:33179866-33179885 None:intergenic 45.0%
ATCATCAGCAGCAAGGATTC+TGG - Chr4:33183290-33183309 MsG0480020065.01.T01:intron 45.0%
ATCTTGTTGCGCGTAAAGTG+AGG - Chr4:33180991-33181010 MsG0480020065.01.T01:intron 45.0%
CAAAGACAGCAATGACTCCA+TGG - Chr4:33181412-33181431 MsG0480020065.01.T01:intron 45.0%
CACACTGCCAATTGACAAAC+AGG + Chr4:33182099-33182118 None:intergenic 45.0%
CATGGAGTCATTGCTGTCTT+TGG + Chr4:33181414-33181433 None:intergenic 45.0%
CATTGTTCTTGCGTCAGATG+GGG - Chr4:33181767-33181786 MsG0480020065.01.T01:CDS 45.0%
CCAGGGTTCAAATCTCTTCA+TGG - Chr4:33181355-33181374 MsG0480020065.01.T01:intron 45.0%
CCATGAAGAGATTTGAACCC+TGG + Chr4:33181358-33181377 None:intergenic 45.0%
CCATTCAGAGCAACCATTCT+GGG - Chr4:33183448-33183467 MsG0480020065.01.T01:intron 45.0%
CCCGTCACTAATCAAGTGAT+CGG + Chr4:33179876-33179895 None:intergenic 45.0%
CCGATCACTTGATTAGTGAC+GGG - Chr4:33179873-33179892 MsG0480020065.01.T01:CDS 45.0%
CGGATACATTCAAGCACAAC+AGG + Chr4:33182155-33182174 None:intergenic 45.0%
CTGCCACATCAATGATAGCA+TGG - Chr4:33182800-33182819 MsG0480020065.01.T01:CDS 45.0%
GGAAAGAATCAAGCAGTGCA+AGG - Chr4:33181572-33181591 MsG0480020065.01.T01:intron 45.0%
GGGAATTAATCAGGATGCCA+TGG - Chr4:33180771-33180790 MsG0480020065.01.T01:intron 45.0%
GTTGAAGATGAAGCAGCATC+AGG - Chr4:33183579-33183598 MsG0480020065.01.T01:intron 45.0%
GTTGTGCTTGAATGTATCCG+TGG - Chr4:33182155-33182174 MsG0480020065.01.T01:CDS 45.0%
GTTTCCTTCCTACCAGCATA+TGG + Chr4:33182003-33182022 None:intergenic 45.0%
TAAATTCAGCTGCTCGGGAA+TGG - Chr4:33183313-33183332 MsG0480020065.01.T01:intron 45.0%
TCCGAACTCCTAAGATTCCA+CGG + Chr4:33182175-33182194 None:intergenic 45.0%
TCCGTGGAATCTTAGGAGTT+CGG - Chr4:33182171-33182190 MsG0480020065.01.T01:CDS 45.0%
TCTGGTAAATTCAGCTGCTC+GGG - Chr4:33183308-33183327 MsG0480020065.01.T01:intron 45.0%
TCTGTGGACAAAAGAGAGCA+AGG - Chr4:33180635-33180654 MsG0480020065.01.T01:intron 45.0%
TCTTGTTGCGCGTAAAGTGA+GGG - Chr4:33180992-33181011 MsG0480020065.01.T01:intron 45.0%
TGCTATCATTGATGTGGCAG+AGG + Chr4:33182800-33182819 None:intergenic 45.0%
TGGTTACTGAGCTCCACTTA+AGG + Chr4:33179846-33179865 None:intergenic 45.0%
TTGGTTGGGAATAGGAGAAG+CGG - Chr4:33181551-33181570 MsG0480020065.01.T01:intron 45.0%
! AATCGGAGCCATCTTTGAGA+AGG - Chr4:33183499-33183518 MsG0480020065.01.T01:intron 45.0%
! AGTCGAAGTACTTGTAGCAG+CGG - Chr4:33180568-33180587 MsG0480020065.01.T01:intron 45.0%
! GTTATCTCGTGGCTTGCAAT+TGG - Chr4:33179897-33179916 MsG0480020065.01.T01:CDS 45.0%
! TGAAGCCTGATTTGCCAAGT+GGG - Chr4:33181459-33181478 MsG0480020065.01.T01:intron 45.0%
! TTGAAGCCTGATTTGCCAAG+TGG - Chr4:33181458-33181477 MsG0480020065.01.T01:intron 45.0%
! TTGTGTGTTTTTCCTCCGGT+TGG - Chr4:33179734-33179753 MsG0480020065.01.T01:CDS 45.0%
! TTTGATGGTCATGGTCCACA+AGG - Chr4:33180966-33180985 MsG0480020065.01.T01:intron 45.0%
!! ACGTGAGATCTGTAGTGGAT+AGG - Chr4:33180464-33180483 MsG0480020065.01.T01:intron 45.0%
!! CGTGAGATCTGTAGTGGATA+GGG - Chr4:33180465-33180484 MsG0480020065.01.T01:intron 45.0%
!!! TTTTATTTTTATTTTACATT+TGG - Chr4:33180215-33180234 MsG0480020065.01.T01:intron 5.0%
AACCCTGGTGCGTCATCAAA+AGG + Chr4:33181648-33181667 None:intergenic 50.0%
AGACAGCAATGACTCCATGG+TGG - Chr4:33181415-33181434 MsG0480020065.01.T01:intron 50.0%
AGACTGTGGTGAGTCTGAGA+AGG - Chr4:33181109-33181128 MsG0480020065.01.T01:intron 50.0%
AGCAGCCGGTGAGAAAATTC+AGG + Chr4:33181729-33181748 None:intergenic 50.0%
AGTAGAGACAGACACGGACA+TGG + Chr4:33183057-33183076 None:intergenic 50.0%
ATCAGGATGCCATGGTTGTG+TGG - Chr4:33180779-33180798 MsG0480020065.01.T01:intron 50.0%
ATTTACACAGCAGGGTCGCA+AGG - Chr4:33180750-33180769 MsG0480020065.01.T01:intron 50.0%
CAACACGATCATCAGCAGCA+AGG - Chr4:33183283-33183302 MsG0480020065.01.T01:intron 50.0%
CGGAACATAACACCAGACTG+TGG - Chr4:33181095-33181114 MsG0480020065.01.T01:intron 50.0%
CTTGCTGCTGATGATCGTGT+TGG + Chr4:33183285-33183304 None:intergenic 50.0%
GAATCAAGCAGTGCAAGGGT+AGG - Chr4:33181577-33181596 MsG0480020065.01.T01:intron 50.0%
GGGGATTCTCGAGCAATCAT+GGG - Chr4:33181386-33181405 MsG0480020065.01.T01:intron 50.0%
GGGTCGCAAGGGAATTAATC+AGG - Chr4:33180762-33180781 MsG0480020065.01.T01:intron 50.0%
TCAGGATGCCATGGTTGTGT+GGG - Chr4:33180780-33180799 MsG0480020065.01.T01:intron 50.0%
TCCGTGGGACGCTATTTGAA+CGG + Chr4:33180320-33180339 None:intergenic 50.0%
TCCGTTCAAATAGCGTCCCA+CGG - Chr4:33180316-33180335 MsG0480020065.01.T01:intron 50.0%
TCCTGCAGTAGAGACAGACA+CGG + Chr4:33183063-33183082 None:intergenic 50.0%
TGAGAAGGATTGTTCTGCCG+AGG - Chr4:33181124-33181143 MsG0480020065.01.T01:intron 50.0%
TGCGAACGTGAGATCTGTAG+TGG - Chr4:33180459-33180478 MsG0480020065.01.T01:intron 50.0%
TGGGGATTCTCGAGCAATCA+TGG - Chr4:33181385-33181404 MsG0480020065.01.T01:intron 50.0%
TTCTCAGACTCACCACAGTC+TGG + Chr4:33181110-33181129 None:intergenic 50.0%
TTTACACAGCAGGGTCGCAA+GGG - Chr4:33180751-33180770 MsG0480020065.01.T01:intron 50.0%
! ACCAGGGTTAGCAATGGCTA+GGG - Chr4:33181659-33181678 MsG0480020065.01.T01:CDS 50.0%
! CCCAGAATGGTTGCTCTGAA+TGG + Chr4:33183451-33183470 None:intergenic 50.0%
! GTCGAAGTACTTGTAGCAGC+GGG - Chr4:33180569-33180588 MsG0480020065.01.T01:intron 50.0%
! TTAGCAATGGCTAGGGCGTT+TGG - Chr4:33181666-33181685 MsG0480020065.01.T01:CDS 50.0%
!! TAGTGACGGGTGTTATCTCG+TGG - Chr4:33179886-33179905 MsG0480020065.01.T01:CDS 50.0%
!!! TGCCTTTTGATGACGCACCA+GGG - Chr4:33181643-33181662 MsG0480020065.01.T01:CDS 50.0%
AAGGGACAGAGACTGTGGTC+AGG + Chr4:33183027-33183046 None:intergenic 55.0%
ACTTGTAGCAGCGGGAGCAA+TGG - Chr4:33180577-33180596 MsG0480020065.01.T01:intron 55.0%
AGCCACACCCTAGGAACTTC+AGG + Chr4:33181624-33181643 None:intergenic 55.0%
AGCCTGAAGTTCCTAGGGTG+TGG - Chr4:33181619-33181638 MsG0480020065.01.T01:CDS 55.0%
AGGGACAGAGACTGTGGTCA+GGG + Chr4:33183026-33183045 None:intergenic 55.0%
ATCGACAGACACTGCTCCGT+TGG + Chr4:33183559-33183578 None:intergenic 55.0%
CGCGCAACAAGATGACCTTG+TGG + Chr4:33180984-33181003 None:intergenic 55.0%
GATCTCTGTCTGTGAGCAGC+CGG + Chr4:33181743-33181762 None:intergenic 55.0%
TCAAAAGGCAGCCACACCCT+AGG + Chr4:33181633-33181652 None:intergenic 55.0%
TCCGTGTCTGTCTCTACTGC+AGG - Chr4:33183059-33183078 MsG0480020065.01.T01:intron 55.0%
TGGTCAGGGTAGCTACATCG+AGG + Chr4:33183012-33183031 None:intergenic 55.0%
! CACCAGGGTTAGCAATGGCT+AGG - Chr4:33181658-33181677 MsG0480020065.01.T01:CDS 55.0%
! TGACGCACCAGGGTTAGCAA+TGG - Chr4:33181653-33181672 MsG0480020065.01.T01:CDS 55.0%
!!! CTGCCTTTTGATGACGCACC+AGG - Chr4:33181642-33181661 MsG0480020065.01.T01:CDS 55.0%
GCCCTAGCCATTGCTAACCC+TGG + Chr4:33181663-33181682 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
Chr4 gene 33179445 33183923 33179445 ID=MsG0480020065.01;Name=MsG0480020065.01
Chr4 mRNA 33179445 33183923 33179445 ID=MsG0480020065.01.T01;Parent=MsG0480020065.01;Name=MsG0480020065.01.T01;_AED=0.50;_eAED=0.50;_QI=312|1|1|1|0.8|0.66|6|228|470
Chr4 exon 33183852 33183923 33183852 ID=MsG0480020065.01.T01:exon:55318;Parent=MsG0480020065.01.T01
Chr4 exon 33182564 33183064 33182564 ID=MsG0480020065.01.T01:exon:55319;Parent=MsG0480020065.01.T01
Chr4 exon 33182094 33182438 33182094 ID=MsG0480020065.01.T01:exon:55320;Parent=MsG0480020065.01.T01
Chr4 exon 33181892 33182009 33181892 ID=MsG0480020065.01.T01:exon:55321;Parent=MsG0480020065.01.T01
Chr4 exon 33181580 33181803 33181580 ID=MsG0480020065.01.T01:exon:55322;Parent=MsG0480020065.01.T01
Chr4 exon 33179445 33180137 33179445 ID=MsG0480020065.01.T01:exon:55323;Parent=MsG0480020065.01.T01
Chr4 five_prime_UTR 33183852 33183923 33183852 ID=MsG0480020065.01.T01:five_prime_utr;Parent=MsG0480020065.01.T01
Chr4 five_prime_UTR 33182825 33183064 33182825 ID=MsG0480020065.01.T01:five_prime_utr;Parent=MsG0480020065.01.T01
Chr4 CDS 33182564 33182824 33182564 ID=MsG0480020065.01.T01:cds;Parent=MsG0480020065.01.T01
Chr4 CDS 33182094 33182438 33182094 ID=MsG0480020065.01.T01:cds;Parent=MsG0480020065.01.T01
Chr4 CDS 33181892 33182009 33181892 ID=MsG0480020065.01.T01:cds;Parent=MsG0480020065.01.T01
Chr4 CDS 33181580 33181803 33181580 ID=MsG0480020065.01.T01:cds;Parent=MsG0480020065.01.T01
Chr4 CDS 33179673 33180137 33179673 ID=MsG0480020065.01.T01:cds;Parent=MsG0480020065.01.T01
Chr4 three_prime_UTR 33179445 33179672 33179445 ID=MsG0480020065.01.T01:three_prime_utr;Parent=MsG0480020065.01.T01
Gene Sequence

>MsG0480020065.01.T01

ATGGGTTGTTGTGTCTCAACGAGCAGTCGAAGTACTTGTAGCAGCGGGAGCAATGGAGAGATGATAACTCCATCTTGCTTAGAAATTTGTTTCTGTGGACAAAAGAGAGCAAGGAGAACATTTTCTGATCATGCTATTTCTCTACACCAATTATCATCCTTACCTAGCAGGATTTTCACTAATGGAAAGAGTCGGGGTTCGTGCATATTTACACAGCAGGGTCGCAAGGGAATTAATCAGGATGCCATGGTTGTGTGGGAAGATTTCATGTCCGAAGATACGATATTTTGTGGTGTTTTTGATGGTCATGGTCCACAAGGTCATCTTGTTGCGCGTAAAGTGAGGGATACATTGCCAGTAAAATTGCTTTCATTTTGGCATTCTCTTGAATCGAAACAAAATAGGTCAGACAAAACTTGCTTCAAACGGAACATAACACCAGACTGTGGTGAGTCTGAGAAGGATTGTTCTGCCGAGGATAAACTGAACTCCACATGGAGAGAAGCTTTCATAAAAGCATACAAGACCATGGACAAAGAGCTTAGGTCTTATCCAAATCTAGACTGCTTCTGTAGTGGAAGCACATCTGTGACTGTAGTAAAGCAGGGTTCAAATCTCTTCATGGGATATATTGGGGATTCTCGAGCAATCATGGGATCCAAAGACAGCAATGACTCCATGGTGGCAATTCAGTTGACTGTTGATTTGAAGCCTGATTTGCCAAGAGAAGCGGAAAGAATCAAGCAGTGCAAGGGTAGGGTTTTTGCTTTGCAAGATGAGCCTGAAGTTCCTAGGGTGTGGCTGCCTTTTGATGACGCACCAGGGTTAGCAATGGCTAGGGCGTTTGGAGATTTCTGCTTGAAGGAGTATGGTGTGATTTCTATACCTGAATTTTCTCACCGGCTGCTCACAGACAGAGATCAATTCATTGTTCTTGCGTCAGATGGGGTTTGGGATGTTTTAAGCAATGAGGAGGTGGTTGAGATAGTATCATCGGCACCAACACGATCATCAGCAGCAAGGATTCTGGTAAATTCAGCTGCTCGGGAATGGAAACTCAAGTACCCGACTTCAAAAATGGATGACTGTGCTGTAGTGTGCTTATTTTTGGATGGTAAAATGGACTCAGAATCAGATTATGATGAACAGGGCTTCTCTTCTGCAACCATTCAGAGCAACCATTCTGGGAATCCAGTTGAATCAGATGATGGACAAAAATCGGAGCCATCTTTGAGAAGGAACTTTACTGTGAGATCATCAGAAGAAAACGAGACCAACGGAGCAGTGTCTGTCGATGTTGAAGATGAAGCAGCATCAGGTGAAGATCAAAACTGGTTAGGTTTGGAAGGGGTCACTCGTGTAAACTCACTCGTCCAACTTCCTAGATTTTCTGAAGAAAGATCAAACTCTTGA

Protein sequence

>MsG0480020065.01.T01

MGCCVSTSSRSTCSSGSNGEMITPSCLEICFCGQKRARRTFSDHAISLHQLSSLPSRIFTNGKSRGSCIFTQQGRKGINQDAMVVWEDFMSEDTIFCGVFDGHGPQGHLVARKVRDTLPVKLLSFWHSLESKQNRSDKTCFKRNITPDCGESEKDCSAEDKLNSTWREAFIKAYKTMDKELRSYPNLDCFCSGSTSVTVVKQGSNLFMGYIGDSRAIMGSKDSNDSMVAIQLTVDLKPDLPREAERIKQCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRLLTDRDQFIVLASDGVWDVLSNEEVVEIVSSAPTRSSAARILVNSAAREWKLKYPTSKMDDCAVVCLFLDGKMDSESDYDEQGFSSATIQSNHSGNPVESDDGQKSEPSLRRNFTVRSSEENETNGAVSVDVEDEAASGEDQNWLGLEGVTRVNSLVQLPRFSEERSNS*