AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580028185.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580028185.01.T02 MTR_5g068460 98.210 447 8 0 1 447 1 447 0.0 904
MsG0580028185.01.T02 MTR_7g074140 59.615 416 125 8 38 447 14 392 4.54e-156 449
MsG0580028185.01.T02 MTR_3g093660 67.480 246 78 2 186 429 57 302 8.96e-110 326
MsG0580028185.01.T01 MTR_5g068460 98.210 447 8 0 1 447 1 447 0.0 904
MsG0580028185.01.T01 MTR_7g074140 59.615 416 125 8 38 447 14 392 4.54e-156 449
MsG0580028185.01.T01 MTR_3g093660 67.480 246 78 2 186 429 57 302 8.96e-110 326
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580028185.01.T02 AT5G01960 60.539 408 116 9 45 447 25 392 3.11e-165 472
MsG0580028185.01.T01 AT5G01960 60.539 408 116 9 45 447 25 392 3.11e-165 472

Find 14 sgRNAs with CRISPR-Local

Find 367 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATGAAGGAATTATGAAAAT+TGG 0.127360 5:-76276458 None:intergenic
AATTGGGGAAAATGGAAAAT+AGG 0.178597 5:-76276441 None:intergenic
ATTATGAAAATTGGGGAAAA+TGG 0.235158 5:-76276449 None:intergenic
ATAGGTTACCTGAGAGCTTA+TGG 0.282402 5:-76276492 None:intergenic
ATGAAGGAATTATGAAAATT+GGG 0.285242 5:-76276457 None:intergenic
ACACGCTCAACACTCTAAAA+AGG 0.288325 5:+76276346 MsG0580028185.01.T01:five_prime_UTR
GATGATGAAAAGTCAGAATC+AGG 0.334693 5:-76276388 None:intergenic
ATTGGGGAAAATGGAAAATA+GGG 0.357675 5:-76276440 None:intergenic
ATGGATTAAGCAATTAATGA+AGG 0.476622 5:-76276473 None:intergenic
TGCTTAATCCATAAGCTCTC+AGG 0.486391 5:+76276484 MsG0580028185.01.T01:five_prime_UTR
GAATCAGGGAGCTGAAAACT+TGG 0.490952 5:-76276373 None:intergenic
TGAAGGAATTATGAAAATTG+GGG 0.495975 5:-76276456 None:intergenic
ATGATGAAAAGTCAGAATCA+GGG 0.622226 5:-76276387 None:intergenic
AATTTGAAGTGAATTAACAA+TGG 0.644707 5:-76276412 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAAAAAAATTTTTTTTTTA+GGG - Chr5:76276646-76276665 None:intergenic 0.0%
!!! TTAAAAAAAATTTTTTTTTT+AGG - Chr5:76276647-76276666 None:intergenic 0.0%
!! AATTGAAAAAAAAAAATGAA+GGG - Chr5:76276531-76276550 None:intergenic 10.0%
!!! TTTAAGAATAGAAATTTTAA+AGG - Chr5:76278450-76278469 None:intergenic 10.0%
!! AAATAAAGGAAAATTCAAAA+TGG - Chr5:76277539-76277558 None:intergenic 15.0%
!! AGAATCAATAAATAAAACAA+AGG - Chr5:76277962-76277981 None:intergenic 15.0%
!! CTTCTTATATATTACAAAAA+GGG + Chr5:76280404-76280423 MsG0580028185.01.T01:CDS 15.0%
!! GAATTGAAAAAAAAAAATGA+AGG - Chr5:76276532-76276551 None:intergenic 15.0%
!! TTCTTATATATTACAAAAAG+GGG + Chr5:76280405-76280424 MsG0580028185.01.T01:CDS 15.0%
!!! AATATACTGTATTTTTATCT+TGG + Chr5:76280237-76280256 MsG0580028185.01.T01:intron 15.0%
!!! TTTGTATTTTCTTGATATTT+GGG - Chr5:76277592-76277611 None:intergenic 15.0%
!!! TTTTATAGTTACACAAATTA+TGG + Chr5:76281334-76281353 MsG0580028185.01.T01:intron 15.0%
!!! TTTTTAATTTGTGTTAAAGA+TGG + Chr5:76276751-76276770 MsG0580028185.01.T01:intron 15.0%
!! AACAATGGAAAAGTAAATAA+AGG - Chr5:76277553-76277572 None:intergenic 20.0%
!! AATGAAGGAATTATGAAAAT+TGG - Chr5:76276461-76276480 None:intergenic 20.0%
!! ATATCTGATAGTCAATATAA+TGG - Chr5:76280347-76280366 None:intergenic 20.0%
!! ATGAAGGAATTATGAAAATT+GGG - Chr5:76276460-76276479 None:intergenic 20.0%
!! ATTAATACTGATGATAACAA+TGG + Chr5:76276845-76276864 MsG0580028185.01.T01:CDS 20.0%
!! CCTTCTTATATATTACAAAA+AGG + Chr5:76280403-76280422 MsG0580028185.01.T01:CDS 20.0%
!! GATATATTTATATACACTGT+TGG - Chr5:76280910-76280929 None:intergenic 20.0%
!! TAGTTGAAAAGAAAGAAATA+GGG + Chr5:76276697-76276716 MsG0580028185.01.T01:five_prime_UTR 20.0%
!! TATGATCATTATGATCATAT+TGG - Chr5:76277515-76277534 None:intergenic 20.0%
!! TATTATCCTCAAAATTAGAT+AGG + Chr5:76281544-76281563 MsG0580028185.01.T01:intron 20.0%
!! TCAATGAAAAACATTTAACA+AGG - Chr5:76277811-76277830 None:intergenic 20.0%
!! TCCAAGTTTAATTATCAATT+GGG + Chr5:76279329-76279348 MsG0580028185.01.T01:intron 20.0%
!! TTAGTTGAAAAGAAAGAAAT+AGG + Chr5:76276696-76276715 MsG0580028185.01.T01:five_prime_UTR 20.0%
!!! AATTTGAAGTGAATTAACAA+TGG - Chr5:76276415-76276434 None:intergenic 20.0%
!!! CCTTTTTGTAATATATAAGA+AGG - Chr5:76280406-76280425 None:intergenic 20.0%
!!! CTTTGTATTTTCTTGATATT+TGG - Chr5:76277593-76277612 None:intergenic 20.0%
!!! GAAATATGTTTTATTTTGCA+GGG + Chr5:76278519-76278538 MsG0580028185.01.T01:intron 20.0%
!!! GAATAGAAATTTTAAAGGTT+TGG - Chr5:76278445-76278464 None:intergenic 20.0%
!!! TATTTTCCTATCTAATTTTG+AGG - Chr5:76281553-76281572 None:intergenic 20.0%
!!! TCAAAAACCTATGTTTTTTA+AGG - Chr5:76279973-76279992 None:intergenic 20.0%
!!! TGAAATATGTTTTATTTTGC+AGG + Chr5:76278518-76278537 MsG0580028185.01.T01:intron 20.0%
!!! TTCAACTAATTGCTAATTTT+GGG - Chr5:76276685-76276704 None:intergenic 20.0%
!!! TTTCAACTAATTGCTAATTT+TGG - Chr5:76276686-76276705 None:intergenic 20.0%
!!! TTTTTTTAAAGATGTTGTGA+AGG - Chr5:76279540-76279559 None:intergenic 20.0%
! AAACAAAATGAGATCAAGAA+AGG - Chr5:76280213-76280232 None:intergenic 25.0%
! AACCAATATATTTCATACAC+AGG - Chr5:76281600-76281619 None:intergenic 25.0%
! AATATAACAAGCAACCATAT+AGG - Chr5:76281484-76281503 None:intergenic 25.0%
! AATCAACTAAAAAAGGAAAC+TGG + Chr5:76280114-76280133 MsG0580028185.01.T01:intron 25.0%
! ACAAACATTGAAGCAAATAA+GGG - Chr5:76279746-76279765 None:intergenic 25.0%
! AGAATATTCATAATCAGGTT+GGG + Chr5:76277092-76277111 MsG0580028185.01.T01:CDS 25.0%
! ATATATTACAAAAAGGGGAA+AGG + Chr5:76280410-76280429 MsG0580028185.01.T01:CDS 25.0%
! ATATTATTTCACATTGGCAA+TGG + Chr5:76279477-76279496 MsG0580028185.01.T01:intron 25.0%
! ATCAACTAAAAAAGGAAACT+GGG + Chr5:76280115-76280134 MsG0580028185.01.T01:intron 25.0%
! ATTAGATAGGAAAATACCTA+CGG + Chr5:76281557-76281576 MsG0580028185.01.T01:intron 25.0%
! ATTAGTATTCCCTCTTAAAT+TGG - Chr5:76280013-76280032 None:intergenic 25.0%
! ATTATGAAAATTGGGGAAAA+TGG - Chr5:76276452-76276471 None:intergenic 25.0%
! CAATAAATAAAACAAAGGTG+TGG - Chr5:76277957-76277976 None:intergenic 25.0%
! CGATTAGAATCAACTAAAAA+AGG + Chr5:76280107-76280126 MsG0580028185.01.T01:intron 25.0%
! CTCCAAGTTTAATTATCAAT+TGG + Chr5:76279328-76279347 MsG0580028185.01.T01:intron 25.0%
! GATTGATGTAACATATAACT+TGG - Chr5:76281198-76281217 None:intergenic 25.0%
! GGAACTGGAAAAAAAAAATT+GGG - Chr5:76281014-76281033 None:intergenic 25.0%
! TAAGGTAAAAATGAATCTTG+TGG + Chr5:76278059-76278078 MsG0580028185.01.T01:intron 25.0%
! TAATCCAACAAAAACGAAAT+CGG - Chr5:76276920-76276939 None:intergenic 25.0%
! TAGGCACACATATTATAATT+CGG - Chr5:76280770-76280789 None:intergenic 25.0%
! TGAAGGAATTATGAAAATTG+GGG - Chr5:76276459-76276478 None:intergenic 25.0%
! TGTTCTCATGTATATTGAAA+AGG - Chr5:76279693-76279712 None:intergenic 25.0%
! TTACACGTCTAAGAAAAATT+GGG + Chr5:76279441-76279460 MsG0580028185.01.T01:intron 25.0%
! TTCCTGTGTATGAAATATAT+TGG + Chr5:76281595-76281614 MsG0580028185.01.T01:intron 25.0%
! TTGTGTAACTATAAAAGTCA+TGG - Chr5:76281330-76281349 None:intergenic 25.0%
! TTTACACGTCTAAGAAAAAT+TGG + Chr5:76279440-76279459 MsG0580028185.01.T01:intron 25.0%
! TTTGTTTGTTCTACTTTACA+TGG + Chr5:76278767-76278786 MsG0580028185.01.T01:intron 25.0%
!! AACTTGGAGAATACATTTTA+CGG - Chr5:76279317-76279336 None:intergenic 25.0%
!! AAGTTGCAATTTTCTTACTA+AGG - Chr5:76278030-76278049 None:intergenic 25.0%
!! ATGGATTAAGCAATTAATGA+AGG - Chr5:76276476-76276495 None:intergenic 25.0%
!! ATTATTTTCTCCACATTATC+TGG + Chr5:76278299-76278318 MsG0580028185.01.T01:intron 25.0%
!! GAAAATTGCATACTTTTGTA+TGG - Chr5:76280469-76280488 None:intergenic 25.0%
!! TCAACTAATTGCTAATTTTG+GGG - Chr5:76276684-76276703 None:intergenic 25.0%
!! TCATCATGTATAAGTTTGTT+TGG + Chr5:76277769-76277788 MsG0580028185.01.T01:intron 25.0%
!! TCCCAATTGATAATTAAACT+TGG - Chr5:76279333-76279352 None:intergenic 25.0%
!! TGATGATATTTTATATCCAC+TGG + Chr5:76278623-76278642 MsG0580028185.01.T01:CDS 25.0%
!! TTTTCTTGATATTTGGGAAA+TGG - Chr5:76277586-76277605 None:intergenic 25.0%
!! TTTTTCTTGAATAGGGAATA+TGG + Chr5:76280611-76280630 MsG0580028185.01.T01:CDS 25.0%
!!! AATTTTATGGATTGAAACAC+AGG + Chr5:76281847-76281866 MsG0580028185.01.T01:intron 25.0%
!!! ATATATTGGTTGATAGTGTT+TGG + Chr5:76281609-76281628 MsG0580028185.01.T01:intron 25.0%
!!! CAAAGTTGTTTTTGATAACT+TGG + Chr5:76277608-76277627 MsG0580028185.01.T01:intron 25.0%
!!! TGTACAATTTTTGCTTTGTT+TGG + Chr5:76278813-76278832 MsG0580028185.01.T01:intron 25.0%
AAACAGTCAGAGGAATATAA+GGG - Chr5:76281517-76281536 None:intergenic 30.0%
AATACTGATGATAACAATGG+TGG + Chr5:76276848-76276867 MsG0580028185.01.T01:CDS 30.0%
AATGGAAGAACTACTAACAA+TGG - Chr5:76277568-76277587 None:intergenic 30.0%
AATTGGGGAAAATGGAAAAT+AGG - Chr5:76276444-76276463 None:intergenic 30.0%
ACAATTGTAACTTACGAGAA+AGG - Chr5:76278191-76278210 None:intergenic 30.0%
ACTATAAAAGTCATGGATGA+TGG - Chr5:76281323-76281342 None:intergenic 30.0%
AGCTTTCATATTGTTAACAG+AGG - Chr5:76278130-76278149 None:intergenic 30.0%
ATACATGAGAACATATAGAC+AGG + Chr5:76279700-76279719 MsG0580028185.01.T01:intron 30.0%
ATGATGAAAAGTCAGAATCA+GGG - Chr5:76276390-76276409 None:intergenic 30.0%
ATTCATCATGTGTTATGCAA+GGG + Chr5:76281639-76281658 MsG0580028185.01.T01:intron 30.0%
ATTCCCTATTCAAGAAAAAC+CGG - Chr5:76280610-76280629 None:intergenic 30.0%
ATTGGGGAAAATGGAAAATA+GGG - Chr5:76276443-76276462 None:intergenic 30.0%
ATTTGATGTATTGTGCATGA+CGG + Chr5:76279826-76279845 MsG0580028185.01.T01:intron 30.0%
CATGCATATAACGTATAACT+TGG - Chr5:76281268-76281287 None:intergenic 30.0%
CGGAACTGGAAAAAAAAAAT+TGG - Chr5:76281015-76281034 None:intergenic 30.0%
CTGATTATGAATATTCTCTC+CGG - Chr5:76277089-76277108 None:intergenic 30.0%
GAAAAGGATTAAGAAGTCAA+TGG - Chr5:76279677-76279696 None:intergenic 30.0%
GAAGTTGCAATAAGGATTAT+TGG + Chr5:76277061-76277080 MsG0580028185.01.T01:CDS 30.0%
GAATGGAACAGAAAATAACA+GGG + Chr5:76277297-76277316 MsG0580028185.01.T01:CDS 30.0%
GACAAACATTGAAGCAAATA+AGG - Chr5:76279747-76279766 None:intergenic 30.0%
GACTATCAGATATATTGATG+CGG + Chr5:76280354-76280373 MsG0580028185.01.T01:intron 30.0%
GAGAATATTCATAATCAGGT+TGG + Chr5:76277091-76277110 MsG0580028185.01.T01:CDS 30.0%
GCTGACATATTATTTCACAT+TGG + Chr5:76279471-76279490 MsG0580028185.01.T01:intron 30.0%
GTGTTAAAGATGGAAACTTT+GGG + Chr5:76276761-76276780 MsG0580028185.01.T01:intron 30.0%
TACATGAGATGAATTGTAGT+TGG + Chr5:76281162-76281181 MsG0580028185.01.T01:intron 30.0%
TATCTTCCGAAAAACCTATA+TGG + Chr5:76281467-76281486 MsG0580028185.01.T01:intron 30.0%
TCAAATAAGTCAATCCAAAC+AGG + Chr5:76279075-76279094 MsG0580028185.01.T01:intron 30.0%
TCAAGAAAGGAAGTTCATTA+CGG + Chr5:76280827-76280846 MsG0580028185.01.T01:CDS 30.0%
TCATGAAACAACTACAAAGA+AGG - Chr5:76279240-76279259 None:intergenic 30.0%
TGATCTTAACTACATAAGCA+AGG - Chr5:76279058-76279077 None:intergenic 30.0%
TGATGTAACATATAACTTGG+AGG - Chr5:76281195-76281214 None:intergenic 30.0%
TGGAAAAAAAAAATTGGGCA+GGG - Chr5:76281009-76281028 None:intergenic 30.0%
TGTGTTAAAGATGGAAACTT+TGG + Chr5:76276760-76276779 MsG0580028185.01.T01:intron 30.0%
TTATAATATGTGTGCCTATC+AGG + Chr5:76280772-76280791 MsG0580028185.01.T01:intron 30.0%
TTATGGTGATACTATTCATC+AGG + Chr5:76281351-76281370 MsG0580028185.01.T01:intron 30.0%
TTCATGTGATATGCATTTAC+TGG + Chr5:76278589-76278608 MsG0580028185.01.T01:CDS 30.0%
TTGCAACTTTGCTAATTGTA+AGG + Chr5:76278041-76278060 MsG0580028185.01.T01:intron 30.0%
TTTATTCCCTAACCTGAAAA+GGG - Chr5:76276622-76276641 None:intergenic 30.0%
TTTATTTGTGTACTTGCACA+TGG + Chr5:76281411-76281430 MsG0580028185.01.T01:intron 30.0%
! AAGCAACCATATAGGTTTTT+CGG - Chr5:76281476-76281495 None:intergenic 30.0%
! ACATAGGTTTTTGAACTAGA+TGG + Chr5:76279979-76279998 MsG0580028185.01.T01:intron 30.0%
! AGTTGATTCTAATCGCTAAA+AGG - Chr5:76280102-76280121 None:intergenic 30.0%
! ATGCACAGATACTTTGTTAT+TGG + Chr5:76281783-76281802 MsG0580028185.01.T01:intron 30.0%
! GAATATTCATAATCAGGTTG+GGG + Chr5:76277093-76277112 MsG0580028185.01.T01:CDS 30.0%
! TGCAGAACAAATCTTTTTAC+TGG + Chr5:76277981-76278000 MsG0580028185.01.T01:intron 30.0%
! TTAATCGACTCAATTGTTTG+AGG + Chr5:76279355-76279374 MsG0580028185.01.T01:intron 30.0%
! TTTTATTCCCTAACCTGAAA+AGG - Chr5:76276623-76276642 None:intergenic 30.0%
!! CTTGAAAGCATTATCAAGAA+AGG + Chr5:76280814-76280833 MsG0580028185.01.T01:CDS 30.0%
!! CTTTCTTGATAATGCTTTCA+AGG - Chr5:76280816-76280835 None:intergenic 30.0%
!! TAATTTGCTTGGTAGAATAG+TGG + Chr5:76277679-76277698 MsG0580028185.01.T01:intron 30.0%
!! TCGTTTTTGTTGGATTATTC+TGG + Chr5:76276923-76276942 MsG0580028185.01.T01:CDS 30.0%
!! TGCACAGATACTTTGTTATT+GGG + Chr5:76281784-76281803 MsG0580028185.01.T01:intron 30.0%
!!! AAGTTTTTTGAGGATCACAA+GGG + Chr5:76277926-76277945 MsG0580028185.01.T01:intron 30.0%
!!! ACAATATTGCAGCTGTTTTT+TGG + Chr5:76279193-76279212 MsG0580028185.01.T01:intron 30.0%
!!! ATATTTTCTGAAACAGTCAG+AGG - Chr5:76281527-76281546 None:intergenic 30.0%
!!! GTTGTTTTTATAAGCTATCC+TGG + Chr5:76278949-76278968 MsG0580028185.01.T01:intron 30.0%
!!! TGACATTGTCTGACTTTTTT+AGG + Chr5:76280514-76280533 MsG0580028185.01.T01:intron 30.0%
!!! TGTTCTGATTCAGTGTTTTT+TGG + Chr5:76281090-76281109 MsG0580028185.01.T01:intron 30.0%
AAAAAAAATTGGGCAGGGAA+TGG - Chr5:76281004-76281023 None:intergenic 35.0%
AAAACAAAACAAGCTACCGT+AGG - Chr5:76281576-76281595 None:intergenic 35.0%
AAAATTCCACATGGCATTAG+AGG - Chr5:76280963-76280982 None:intergenic 35.0%
AAACGAAATCGGTGACAAAA+AGG - Chr5:76276909-76276928 None:intergenic 35.0%
AAAGAAGATGAAGACACAAG+AGG - Chr5:76277232-76277251 None:intergenic 35.0%
AAATTCCACATGGCATTAGA+GGG - Chr5:76280962-76280981 None:intergenic 35.0%
AACAGTCAGAGGAATATAAG+GGG - Chr5:76281516-76281535 None:intergenic 35.0%
AACGAAATCGGTGACAAAAA+GGG - Chr5:76276908-76276927 None:intergenic 35.0%
AACTTTCAAGCTAACATCTG+TGG + Chr5:76280670-76280689 MsG0580028185.01.T01:CDS 35.0%
AAGAAAGGAAGTTCATTACG+GGG + Chr5:76280829-76280848 MsG0580028185.01.T01:CDS 35.0%
AAGTGACAACCAAATGAGAA+AGG + Chr5:76279922-76279941 MsG0580028185.01.T01:intron 35.0%
AATTATTACCTGTTCTGCTG+TGG - Chr5:76280861-76280880 None:intergenic 35.0%
ACATATTTCACTCAGCGTTA+TGG - Chr5:76278508-76278527 None:intergenic 35.0%
AGACTGTTTGGAAAAGCTTA+TGG - Chr5:76279028-76279047 None:intergenic 35.0%
AGAGTGAAGAATTGAGGATT+AGG + Chr5:76276722-76276741 MsG0580028185.01.T01:five_prime_UTR 35.0%
ATATTCACGATCTTGGTCAA+TGG + Chr5:76278684-76278703 MsG0580028185.01.T01:CDS 35.0%
ATCCCTTCAGATTGTAATTG+TGG + Chr5:76280283-76280302 MsG0580028185.01.T01:intron 35.0%
ATGCATGACATACATATGCA+AGG + Chr5:76279153-76279172 MsG0580028185.01.T01:intron 35.0%
ATGTGATATGCATTTACTGG+TGG + Chr5:76278592-76278611 MsG0580028185.01.T01:CDS 35.0%
CAAGAAAGGAAGTTCATTAC+GGG + Chr5:76280828-76280847 MsG0580028185.01.T01:CDS 35.0%
CAGGTTTCTTTGTCACAATT+TGG + Chr5:76278342-76278361 MsG0580028185.01.T01:intron 35.0%
CGGAGAGAATATTCATAATC+AGG + Chr5:76277087-76277106 MsG0580028185.01.T01:CDS 35.0%
CTGGAAAAAAAAAATTGGGC+AGG - Chr5:76281010-76281029 None:intergenic 35.0%
GAAACAGTCAGAGGAATATA+AGG - Chr5:76281518-76281537 None:intergenic 35.0%
GAAAGTTAAATACAACCCTG+TGG - Chr5:76280657-76280676 None:intergenic 35.0%
GAAATGACTACCAGATAATG+TGG - Chr5:76278312-76278331 None:intergenic 35.0%
GAAGTAGGTTATGATGATTG+TGG + Chr5:76277115-76277134 MsG0580028185.01.T01:CDS 35.0%
GAGTGAAGAATTGAGGATTA+GGG + Chr5:76276723-76276742 MsG0580028185.01.T01:five_prime_UTR 35.0%
GATGATGAAAAGTCAGAATC+AGG - Chr5:76276391-76276410 None:intergenic 35.0%
GATTCATCATGTGTTATGCA+AGG + Chr5:76281638-76281657 MsG0580028185.01.T01:intron 35.0%
GCTCTAGTACCAATTTAAGA+GGG + Chr5:76280001-76280020 MsG0580028185.01.T01:intron 35.0%
GGAATGGAACAGAAAATAAC+AGG + Chr5:76277296-76277315 MsG0580028185.01.T01:CDS 35.0%
GGCTGAACCTTAAAAAACAT+AGG + Chr5:76279963-76279982 MsG0580028185.01.T01:intron 35.0%
TCAAGGCAGAAATAAAGCAT+TGG - Chr5:76280799-76280818 None:intergenic 35.0%
TCAGAGATATGATATTCAGC+TGG + Chr5:76277333-76277352 MsG0580028185.01.T01:CDS 35.0%
TGCATGACATACATATGCAA+GGG + Chr5:76279154-76279173 MsG0580028185.01.T01:intron 35.0%
TTAAAGATGGAAACTTTGGG+TGG + Chr5:76276764-76276783 MsG0580028185.01.T01:intron 35.0%
TTATTCCCTAACCTGAAAAG+GGG - Chr5:76276621-76276640 None:intergenic 35.0%
TTCATTCGACAGCATTTACA+AGG + Chr5:76277409-76277428 MsG0580028185.01.T01:CDS 35.0%
TTTACAATCTCTTCCTCTGA+AGG + Chr5:76278222-76278241 MsG0580028185.01.T01:intron 35.0%
TTTGTTTGTGATGTTGAGCT+TGG + Chr5:76277471-76277490 MsG0580028185.01.T01:intron 35.0%
! ATAACAATGGTGGTGTAACT+TGG + Chr5:76276858-76276877 MsG0580028185.01.T01:CDS 35.0%
! ATTTTCTTCATCCCCTTTTC+AGG + Chr5:76276607-76276626 MsG0580028185.01.T01:intron 35.0%
! CTTTTTACTAAGGACCTGTT+TGG - Chr5:76279092-76279111 None:intergenic 35.0%
! TAAGCCACACAAGCATTTTT+CGG - Chr5:76277846-76277865 None:intergenic 35.0%
! TCTAATGCCATGTGGAATTT+TGG + Chr5:76280962-76280981 MsG0580028185.01.T01:intron 35.0%
!! AAGCATTTTTCGGTTGGATT+TGG - Chr5:76277836-76277855 None:intergenic 35.0%
!! AAGGGAGTGAATAGCTTTAT+AGG - Chr5:76276513-76276532 None:intergenic 35.0%
!! AATAAAGCATTGGACCTGAT+AGG - Chr5:76280789-76280808 None:intergenic 35.0%
!! AGCATTTTTCGGTTGGATTT+GGG - Chr5:76277835-76277854 None:intergenic 35.0%
!! ATTGGTTGATAGTGTTTGGT+TGG + Chr5:76281613-76281632 MsG0580028185.01.T01:intron 35.0%
!! GCACAGATACTTTGTTATTG+GGG + Chr5:76281785-76281804 MsG0580028185.01.T01:intron 35.0%
!! TCATTTGGTTGTCACTTTGT+CGG - Chr5:76279919-76279938 None:intergenic 35.0%
!! TGGTGGTGTATATTGTTTTC+TGG + Chr5:76281431-76281450 MsG0580028185.01.T01:intron 35.0%
!! TTGGTTGATAGTGTTTGGTT+GGG + Chr5:76281614-76281633 MsG0580028185.01.T01:intron 35.0%
!! TTGTTCTGAGGTAATTTGCT+TGG + Chr5:76277668-76277687 MsG0580028185.01.T01:intron 35.0%
!!! ATCACGTGAGAAGTTTTTTG+AGG + Chr5:76277916-76277935 MsG0580028185.01.T01:intron 35.0%
!!! CAGGAGCTTACTTTTTACTA+AGG - Chr5:76279102-76279121 None:intergenic 35.0%
!!! GAAGTTTTTTGAGGATCACA+AGG + Chr5:76277925-76277944 MsG0580028185.01.T01:intron 35.0%
!!! GTACCGGTTTTTCTTGAATA+GGG + Chr5:76280604-76280623 MsG0580028185.01.T01:CDS 35.0%
!!! GTTTTATTTTGCAGGGAGAT+AGG + Chr5:76278526-76278545 MsG0580028185.01.T01:intron 35.0%
!!! TTTCTCTAAGCCCCTTTTTT+CGG - Chr5:76277887-76277906 None:intergenic 35.0%
AAAATCCCATGCAACAGCAA+CGG - Chr5:76281035-76281054 None:intergenic 40.0%
AAACTTGCCTATGTGTAGAC+AGG + Chr5:76279288-76279307 MsG0580028185.01.T01:intron 40.0%
AAGGCTGATCCTTTCTCATT+TGG - Chr5:76279934-76279953 None:intergenic 40.0%
AAGTGTTAATCACCTGTCGA+CGG - Chr5:76280445-76280464 None:intergenic 40.0%
ACAGTCAGAGGAATATAAGG+GGG - Chr5:76281515-76281534 None:intergenic 40.0%
ACATCCTCCAAAATTCCACA+TGG - Chr5:76280972-76280991 None:intergenic 40.0%
ACCAACAACAAAAGCGAGAA+AGG - Chr5:76277385-76277404 None:intergenic 40.0%
ACGAAATCGGTGACAAAAAG+GGG - Chr5:76276907-76276926 None:intergenic 40.0%
ACTGCAGTCGATATCACATA+AGG - Chr5:76279411-76279430 None:intergenic 40.0%
AGGAAAGTCTCTTTACTTGC+TGG + Chr5:76278546-76278565 MsG0580028185.01.T01:CDS 40.0%
AGGCCACAATTACAATCTGA+AGG - Chr5:76280289-76280308 None:intergenic 40.0%
AGGGTTAGAGTGAAGAATTG+AGG + Chr5:76276716-76276735 MsG0580028185.01.T01:five_prime_UTR 40.0%
AGGTTATGATGATTGTGGTG+AGG + Chr5:76277120-76277139 MsG0580028185.01.T01:CDS 40.0%
ATAGGTTACCTGAGAGCTTA+TGG - Chr5:76276495-76276514 None:intergenic 40.0%
ATTGTCAACAACGGAGTTTC+TGG + Chr5:76276980-76276999 MsG0580028185.01.T01:CDS 40.0%
ATTTGTGTACTTGCACATGG+TGG + Chr5:76281414-76281433 MsG0580028185.01.T01:intron 40.0%
CACGCTATAAGTGTGAACAA+TGG - Chr5:76278256-76278275 None:intergenic 40.0%
CCTGTAATAATTACAGACCC+CGG + Chr5:76279118-76279137 MsG0580028185.01.T01:intron 40.0%
CGTTCGAGTAATGATTCTGA+GGG + Chr5:76276953-76276972 MsG0580028185.01.T01:CDS 40.0%
CTGCAGTCGATATCACATAA+GGG - Chr5:76279410-76279429 None:intergenic 40.0%
CTGTAATAATTACAGACCCC+GGG + Chr5:76279119-76279138 MsG0580028185.01.T01:intron 40.0%
GCAATAAGGATTATTGGAGC+CGG + Chr5:76277067-76277086 MsG0580028185.01.T01:CDS 40.0%
GCATGCAATATTCACGATCT+TGG + Chr5:76278677-76278696 MsG0580028185.01.T01:CDS 40.0%
GGCCACAATTACAATCTGAA+GGG - Chr5:76280288-76280307 None:intergenic 40.0%
GTGAATATTGCATGCCAGAA+AGG - Chr5:76278672-76278691 None:intergenic 40.0%
GTGTAACTTGGTATGGAATG+AGG + Chr5:76276870-76276889 MsG0580028185.01.T01:CDS 40.0%
TAACCAAGTTGCATCTCAGT+AGG + Chr5:76279606-76279625 MsG0580028185.01.T01:intron 40.0%
TCTCTTGGCATATAGCACAT+AGG - Chr5:76281889-76281908 None:intergenic 40.0%
TGCTTAATCCATAAGCTCTC+AGG + Chr5:76276484-76276503 MsG0580028185.01.T01:five_prime_UTR 40.0%
TTGATCTTACATTGCTGCAG+TGG + Chr5:76278729-76278748 MsG0580028185.01.T01:intron 40.0%
TTGCTTGGTAGAATAGTGGT+TGG + Chr5:76277683-76277702 MsG0580028185.01.T01:intron 40.0%
! AATGCCATGTGGAATTTTGG+AGG + Chr5:76280965-76280984 MsG0580028185.01.T01:intron 40.0%
! AATGGTGGTGTAACTTGGTA+TGG + Chr5:76276863-76276882 MsG0580028185.01.T01:CDS 40.0%
! ACACGCTCAACACTCTAAAA+AGG + Chr5:76276346-76276365 MsG0580028185.01.T01:five_prime_UTR 40.0%
! GACGATGCTGATGATAATGA+TGG - Chr5:76276806-76276825 None:intergenic 40.0%
! GAGGGTATGATTGTCAACAA+CGG + Chr5:76276971-76276990 MsG0580028185.01.T01:CDS 40.0%
! GCGTGAGTCTTGTCTTAATT+TGG + Chr5:76278271-76278290 MsG0580028185.01.T01:intron 40.0%
! GGCTCTAGTACCAATTTAAG+AGG + Chr5:76280000-76280019 MsG0580028185.01.T01:intron 40.0%
! TAAGAAGCAGACAGCTTTGA+AGG + Chr5:76278400-76278419 MsG0580028185.01.T01:CDS 40.0%
! TTGGTCACTGATGGTGAAAT+TGG + Chr5:76279212-76279231 MsG0580028185.01.T01:intron 40.0%
!! GCTGTTGTTTCCGAAAAAAG+GGG + Chr5:76277874-76277893 MsG0580028185.01.T01:intron 40.0%
!! GGCTGTTGTTTCCGAAAAAA+GGG + Chr5:76277873-76277892 MsG0580028185.01.T01:intron 40.0%
!! TCCTTTCTCGCTTTTGTTGT+TGG + Chr5:76277381-76277400 MsG0580028185.01.T01:CDS 40.0%
!! TGGCTGTTGTTTCCGAAAAA+AGG + Chr5:76277872-76277891 MsG0580028185.01.T01:intron 40.0%
!!! AGCTGTTTTTTGGTCACTGA+TGG + Chr5:76279203-76279222 MsG0580028185.01.T01:intron 40.0%
!!! GGTACCGGTTTTTCTTGAAT+AGG + Chr5:76280603-76280622 MsG0580028185.01.T01:CDS 40.0%
!!! GTCACCGATTTCGTTTTTGT+TGG + Chr5:76276913-76276932 MsG0580028185.01.T01:CDS 40.0%
!!! TTCATCCCCTTTTCAGGTTA+GGG + Chr5:76276613-76276632 MsG0580028185.01.T01:intron 40.0%
!!! TTTTTACTGGTTCTCCCCTT+TGG + Chr5:76277994-76278013 MsG0580028185.01.T01:intron 40.0%
AAAAATTGGGCAGGGAATGG+AGG - Chr5:76281001-76281020 None:intergenic 45.0%
AAAATTGGGCAGGGAATGGA+GGG - Chr5:76281000-76281019 None:intergenic 45.0%
AAAGTCCCTCTAATGCCATG+TGG + Chr5:76280954-76280973 MsG0580028185.01.T01:intron 45.0%
AAGAAAAACCGGTACCAGAC+TGG - Chr5:76280599-76280618 None:intergenic 45.0%
AAGAATCTGCTCGATCCACT+TGG - Chr5:76277362-76277381 None:intergenic 45.0%
AAGCTATCCTGGAGAGCTTA+TGG + Chr5:76278960-76278979 MsG0580028185.01.T01:intron 45.0%
AAGTTGCATCTCAGTAGGTG+GGG + Chr5:76279611-76279630 MsG0580028185.01.T01:intron 45.0%
AGGTCATAATTTCCGTCGAC+AGG + Chr5:76280430-76280449 MsG0580028185.01.T01:CDS 45.0%
AGTCATTTCTGCGAACTTGC+AGG + Chr5:76278323-76278342 MsG0580028185.01.T01:intron 45.0%
ATATTCAGCTGGTTGCCAAG+TGG + Chr5:76277344-76277363 MsG0580028185.01.T01:CDS 45.0%
ATGACGGCATCAACACTTAG+AGG + Chr5:76279842-76279861 MsG0580028185.01.T01:intron 45.0%
ATGAGAAAGGATCAGCCTTC+TGG + Chr5:76279935-76279954 MsG0580028185.01.T01:intron 45.0%
ATTGAGTGAGAATGATGCCG+AGG + Chr5:76277174-76277193 MsG0580028185.01.T01:CDS 45.0%
ATTGATGCGGCAAGTTGCAA+TGG + Chr5:76280367-76280386 MsG0580028185.01.T01:CDS 45.0%
CAAGGACTTGTGAGACTGTT+TGG - Chr5:76279040-76279059 None:intergenic 45.0%
CAAGTTGCATCTCAGTAGGT+GGG + Chr5:76279610-76279629 MsG0580028185.01.T01:intron 45.0%
CACGATCTTGGTCAATGGTA+TGG + Chr5:76278689-76278708 MsG0580028185.01.T01:intron 45.0%
CCAACCGAAAAATGCTTGTG+TGG + Chr5:76277839-76277858 MsG0580028185.01.T01:intron 45.0%
CCGGGGTCTGTAATTATTAC+AGG - Chr5:76279121-76279140 None:intergenic 45.0%
CCTAATTCCATAAGCTCTCC+AGG - Chr5:76278970-76278989 None:intergenic 45.0%
CCTGGAGAGCTTATGGAATT+AGG + Chr5:76278967-76278986 MsG0580028185.01.T01:intron 45.0%
GAATCAGGGAGCTGAAAACT+TGG - Chr5:76276376-76276395 None:intergenic 45.0%
GAGCTTATTGCTGAGAGAAG+TGG + Chr5:76277142-76277161 MsG0580028185.01.T01:CDS 45.0%
GCATATAGCACATAGGTCAC+CGG - Chr5:76281882-76281901 None:intergenic 45.0%
GCATCAACACTTAGAGGAGA+CGG + Chr5:76279848-76279867 MsG0580028185.01.T01:intron 45.0%
GCATCATTCTCACTCAATCC+AGG - Chr5:76277172-76277191 None:intergenic 45.0%
GCGTTCGAGTAATGATTCTG+AGG + Chr5:76276952-76276971 MsG0580028185.01.T01:CDS 45.0%
GCTAACATCTGTGGTTGAGA+AGG + Chr5:76280679-76280698 MsG0580028185.01.T01:CDS 45.0%
GCTTGTGTGGCTTACAATAC+TGG + Chr5:76277852-76277871 MsG0580028185.01.T01:intron 45.0%
GGTGACAAAAAGGGGTTAAC+AGG - Chr5:76276899-76276918 None:intergenic 45.0%
GGTTGGATACATGGAACAGA+CGG + Chr5:76279632-76279651 MsG0580028185.01.T01:intron 45.0%
GTGGAATTGAGGCTAGTGAA+GGG + Chr5:76277203-76277222 MsG0580028185.01.T01:CDS 45.0%
GTTGGATACATGGAACAGAC+GGG + Chr5:76279633-76279652 MsG0580028185.01.T01:intron 45.0%
GTTTGCAGCGCAACAAGATA+GGG - Chr5:76281922-76281941 None:intergenic 45.0%
TAAGGTAGAACACCGCCAAA+GGG - Chr5:76278012-76278031 None:intergenic 45.0%
TAGGGGAATGCATCTTCTCT+TGG - Chr5:76281904-76281923 None:intergenic 45.0%
TGGAATTGAGGCTAGTGAAG+GGG + Chr5:76277204-76277223 MsG0580028185.01.T01:CDS 45.0%
TGTTTGCAGCGCAACAAGAT+AGG - Chr5:76281923-76281942 None:intergenic 45.0%
TTCATCTTCTTTGTCGTCGC+TGG + Chr5:76277240-76277259 MsG0580028185.01.T01:CDS 45.0%
TTGAGTGAGAATGATGCCGA+GGG + Chr5:76277175-76277194 MsG0580028185.01.T01:CDS 45.0%
TTTCCATCATTCCCAACTGC+AGG - Chr5:76277714-76277733 None:intergenic 45.0%
TTTGCAGCGCAACAAGATAG+GGG - Chr5:76281921-76281940 None:intergenic 45.0%
! ATTGCATGCCAGAAAGGTGT+TGG - Chr5:76278666-76278685 None:intergenic 45.0%
! CGTCGTCATCATCTTTTGGA+GGG + Chr5:76276822-76276841 MsG0580028185.01.T01:CDS 45.0%
! GCATCGTCGTCATCATCTTT+TGG + Chr5:76276818-76276837 MsG0580028185.01.T01:CDS 45.0%
! GCGAAGATTGTGTTTCTGAG+TGG + Chr5:76281951-76281970 MsG0580028185.01.T01:CDS 45.0%
! GTCACTTTGTCGGATATCAC+AGG - Chr5:76279909-76279928 None:intergenic 45.0%
! TCGTCGTCATCATCTTTTGG+AGG + Chr5:76276821-76276840 MsG0580028185.01.T01:CDS 45.0%
! TCTTTTCGTCACTGACCACA+GGG + Chr5:76280639-76280658 MsG0580028185.01.T01:CDS 45.0%
! TGTTGGGTTAGGAGGTAACA+TGG - Chr5:76278649-76278668 None:intergenic 45.0%
!! AATGGATTGTGCACCTTCAG+AGG - Chr5:76278238-76278257 None:intergenic 45.0%
!! CAACAACGGAGTTTCTGGTT+CGG + Chr5:76276985-76277004 MsG0580028185.01.T01:CDS 45.0%
!! CATAATCAGGTTGGGGAAGT+AGG + Chr5:76277100-76277119 MsG0580028185.01.T01:CDS 45.0%
!! CCACACAAGCATTTTTCGGT+TGG - Chr5:76277842-76277861 None:intergenic 45.0%
!! TTACGATCTCAGGTTGATGC+TGG + Chr5:76277010-76277029 MsG0580028185.01.T01:CDS 45.0%
!! TTGCATGCCAGAAAGGTGTT+GGG - Chr5:76278665-76278684 None:intergenic 45.0%
!!! CTTCATCCCCTTTTCAGGTT+AGG + Chr5:76276612-76276631 MsG0580028185.01.T01:intron 45.0%
!!! ATATATAATTCTAAATTTTA+TGG + Chr5:76281834-76281853 MsG0580028185.01.T01:intron 5.0%
AAGGTAGAACACCGCCAAAG+GGG - Chr5:76278011-76278030 None:intergenic 50.0%
ACGGCATCCTGTCTACACAT+AGG - Chr5:76279298-76279317 None:intergenic 50.0%
AGCGTTATGGTACGAGGATG+AGG - Chr5:76278495-76278514 None:intergenic 50.0%
AGGATCAGCCTTCTGGATGT+TGG + Chr5:76279942-76279961 MsG0580028185.01.T01:intron 50.0%
AGGTTCAGCCAACATCCAGA+AGG - Chr5:76279953-76279972 None:intergenic 50.0%
AGTAGGTGGGGTTGGATACA+TGG + Chr5:76279623-76279642 MsG0580028185.01.T01:intron 50.0%
ATGCATTCAGCATCTCACCC+GGG - Chr5:76279139-76279158 None:intergenic 50.0%
CATGCATTCAGCATCTCACC+CGG - Chr5:76279140-76279159 None:intergenic 50.0%
CCAAGTTGCATCTCAGTAGG+TGG + Chr5:76279609-76279628 MsG0580028185.01.T01:intron 50.0%
CCACCTACTGAGATGCAACT+TGG - Chr5:76279612-76279631 None:intergenic 50.0%
CCATCTAGTACAGTGTCCTC+CGG - Chr5:76279878-76279897 None:intergenic 50.0%
CTAAGGTAGAACACCGCCAA+AGG - Chr5:76278013-76278032 None:intergenic 50.0%
CTCCTAACCCAACACCTTTC+TGG + Chr5:76278655-76278674 MsG0580028185.01.T01:CDS 50.0%
GAAACACAGGTTACTGCTGC+CGG + Chr5:76281860-76281879 MsG0580028185.01.T01:intron 50.0%
GAGGACACTGTACTAGATGG+TGG + Chr5:76279878-76279897 MsG0580028185.01.T01:intron 50.0%
GGTGGAATTGAGGCTAGTGA+AGG + Chr5:76277202-76277221 MsG0580028185.01.T01:CDS 50.0%
GTGCAGGGGAAGTTGCAATA+AGG + Chr5:76277053-76277072 MsG0580028185.01.T01:CDS 50.0%
TCACTCAGCGTTATGGTACG+AGG - Chr5:76278501-76278520 None:intergenic 50.0%
TTAGGAGGTAACATGGCCAG+TGG - Chr5:76278642-76278661 None:intergenic 50.0%
! CAGTTCCGTTGCTGTTGCAT+GGG + Chr5:76281027-76281046 MsG0580028185.01.T01:intron 50.0%
! CATGTGTTATGCAAGGGTGC+TGG + Chr5:76281645-76281664 MsG0580028185.01.T01:intron 50.0%
! CTCTTTTCGTCACTGACCAC+AGG + Chr5:76280638-76280657 MsG0580028185.01.T01:CDS 50.0%
! TGGTTCGGAGTTACGATCTC+AGG + Chr5:76277000-76277019 MsG0580028185.01.T01:CDS 50.0%
!! CAGAAAGGTGTTGGGTTAGG+AGG - Chr5:76278657-76278676 None:intergenic 50.0%
!! GCACTGACTTGCTTGTTCTG+AGG + Chr5:76277656-76277675 MsG0580028185.01.T01:intron 50.0%
!! TAGTGGACAGGTTGATGGTG+AGG + Chr5:76277267-76277286 MsG0580028185.01.T01:CDS 50.0%
!! TGCCAGAAAGGTGTTGGGTT+AGG - Chr5:76278660-76278679 None:intergenic 50.0%
!! TTACTGGTTCTCCCCTTTGG+CGG + Chr5:76277997-76278016 MsG0580028185.01.T01:intron 50.0%
AACCGGTACCAGACTGGTGT+TGG - Chr5:76280593-76280612 None:intergenic 55.0%
ACTTAGAGGAGACGGCTGAC+CGG + Chr5:76279856-76279875 MsG0580028185.01.T01:intron 55.0%
CCATGCAACAGCAACGGAAC+TGG - Chr5:76281029-76281048 None:intergenic 55.0%
CCGGAGGACACTGTACTAGA+TGG + Chr5:76279875-76279894 MsG0580028185.01.T01:intron 55.0%
CCTTGTTGCCAACACCAGTC+TGG + Chr5:76280582-76280601 MsG0580028185.01.T01:CDS 55.0%
CTCAATTCCACCACGACCCT+CGG - Chr5:76277194-76277213 None:intergenic 55.0%
CTGTTGCTGGGAGTAGTGCA+GGG + Chr5:76277038-76277057 MsG0580028185.01.T01:CDS 55.0%
GCTGAGAGAAGTGGAATGCC+TGG + Chr5:76277151-76277170 MsG0580028185.01.T01:CDS 55.0%
GGTCTATGCCACAGCAGAAC+AGG + Chr5:76280850-76280869 MsG0580028185.01.T01:CDS 55.0%
GGTTGGATGTGCCTGCAGTT+GGG + Chr5:76277700-76277719 MsG0580028185.01.T01:intron 55.0%
GTGCCTGCAGTTGGGAATGA+TGG + Chr5:76277708-76277727 MsG0580028185.01.T01:intron 55.0%
TCTTCTTTGTCGTCGCTGGC+TGG + Chr5:76277244-76277263 MsG0580028185.01.T01:CDS 55.0%
TGCATCTCAGTAGGTGGGGT+TGG + Chr5:76279615-76279634 MsG0580028185.01.T01:intron 55.0%
TGCATTCAGCATCTCACCCG+GGG - Chr5:76279138-76279157 None:intergenic 55.0%
TGCCAACACCAGTCTGGTAC+CGG + Chr5:76280588-76280607 MsG0580028185.01.T01:CDS 55.0%
TGGTTGGATGTGCCTGCAGT+TGG + Chr5:76277699-76277718 MsG0580028185.01.T01:intron 55.0%
TGTTGCTGGGAGTAGTGCAG+GGG + Chr5:76277039-76277058 MsG0580028185.01.T01:CDS 55.0%
! CCAGTTCCGTTGCTGTTGCA+TGG + Chr5:76281026-76281045 MsG0580028185.01.T01:intron 55.0%
!! AGGTTGATGGTGAGGCTGCT+GGG + Chr5:76277275-76277294 MsG0580028185.01.T01:CDS 55.0%
!! ATGCTGGTGGTGCTGTTGCT+GGG + Chr5:76277026-76277045 MsG0580028185.01.T01:CDS 55.0%
!! CCAGACTGGTGTTGGCAACA+AGG - Chr5:76280585-76280604 None:intergenic 55.0%
!! CGATCTCAGGTTGATGCTGG+TGG + Chr5:76277013-76277032 MsG0580028185.01.T01:CDS 55.0%
!! GCTGGTAGTGGACAGGTTGA+TGG + Chr5:76277262-76277281 MsG0580028185.01.T01:CDS 55.0%
AATGATGCCGAGGGTCGTGG+TGG + Chr5:76277184-76277203 MsG0580028185.01.T01:CDS 60.0%
GAGAATGATGCCGAGGGTCG+TGG + Chr5:76277181-76277200 MsG0580028185.01.T01:CDS 60.0%
GATGGTGAGGCTGCTGGGAA+TGG + Chr5:76277280-76277299 MsG0580028185.01.T01:CDS 60.0%
GCTGTTGCTGGGAGTAGTGC+AGG + Chr5:76277037-76277056 MsG0580028185.01.T01:CDS 60.0%
! CGAGGGTCGTGGTGGAATTG+AGG + Chr5:76277192-76277211 MsG0580028185.01.T01:CDS 60.0%
! TTGTCGTCGCTGGCTGGTAG+TGG + Chr5:76277250-76277269 MsG0580028185.01.T01:CDS 60.0%
!! CAGGTTGATGGTGAGGCTGC+TGG + Chr5:76277274-76277293 MsG0580028185.01.T01:CDS 60.0%
!! GATGCTGGTGGTGCTGTTGC+TGG + Chr5:76277025-76277044 MsG0580028185.01.T01:CDS 60.0%
TAGAGGAGACGGCTGACCGG+AGG + Chr5:76279859-76279878 MsG0580028185.01.T01:intron 65.0%
!! GTCGCTGGCTGGTAGTGGAC+AGG + Chr5:76277255-76277274 MsG0580028185.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr5 gene 76276318 76281976 76276318 ID=MsG0580028185.01;Name=MsG0580028185.01
Chr5 mRNA 76276318 76281976 76276318 ID=MsG0580028185.01.T01;Parent=MsG0580028185.01;Name=MsG0580028185.01.T01;_AED=0.41;_eAED=0.41;_QI=308|1|0.88|1|0.75|0.66|9|0|447
Chr5 exon 76276318 76276461 76276318 ID=MsG0580028185.01.T01:exon:23988;Parent=MsG0580028185.01.T01
Chr5 exon 76276483 76276505 76276483 ID=MsG0580028185.01.T01:exon:23989;Parent=MsG0580028185.01.T01
Chr5 five_prime_UTR 76276318 76276461 76276318 ID=MsG0580028185.01.T01:five_prime_utr;Parent=MsG0580028185.01.T01
Chr5 five_prime_UTR 76276483 76276505 76276483 ID=MsG0580028185.01.T01:five_prime_utr;Parent=MsG0580028185.01.T01
Chr5 five_prime_UTR 76276629 76276769 76276629 ID=MsG0580028185.01.T01:five_prime_utr;Parent=MsG0580028185.01.T01
Chr5 CDS 76276770 76277430 76276770 ID=MsG0580028185.01.T01:cds;Parent=MsG0580028185.01.T01
Chr5 CDS 76278345 76278421 76278345 ID=MsG0580028185.01.T01:cds;Parent=MsG0580028185.01.T01
Chr5 CDS 76278540 76278705 76278540 ID=MsG0580028185.01.T01:cds;Parent=MsG0580028185.01.T01
Chr5 CDS 76280363 76280451 76280363 ID=MsG0580028185.01.T01:cds;Parent=MsG0580028185.01.T01
Chr5 CDS 76280536 76280700 76280536 ID=MsG0580028185.01.T01:cds;Parent=MsG0580028185.01.T01
Chr5 CDS 76280794 76280871 76280794 ID=MsG0580028185.01.T01:cds;Parent=MsG0580028185.01.T01
Chr5 CDS 76281869 76281976 76281869 ID=MsG0580028185.01.T01:cds;Parent=MsG0580028185.01.T01
Chr5 mRNA 76276320 76281976 76276320 ID=MsG0580028185.01.T02;Parent=MsG0580028185.01;Name=MsG0580028185.01.T02;_AED=0.41;_eAED=0.41;_QI=327|1|0.87|1|0.85|0.75|8|0|447
Chr5 exon 76276320 76276505 76276320 ID=MsG0580028185.01.T02:exon:23997;Parent=MsG0580028185.01.T02
Chr5 five_prime_UTR 76276320 76276505 76276320 ID=MsG0580028185.01.T02:five_prime_utr;Parent=MsG0580028185.01.T02
Chr5 five_prime_UTR 76276629 76276769 76276629 ID=MsG0580028185.01.T02:five_prime_utr;Parent=MsG0580028185.01.T02
Chr5 CDS 76276770 76277430 76276770 ID=MsG0580028185.01.T02:cds;Parent=MsG0580028185.01.T02
Chr5 CDS 76278345 76278421 76278345 ID=MsG0580028185.01.T02:cds;Parent=MsG0580028185.01.T02
Chr5 CDS 76278540 76278705 76278540 ID=MsG0580028185.01.T02:cds;Parent=MsG0580028185.01.T02
Chr5 CDS 76280363 76280451 76280363 ID=MsG0580028185.01.T02:cds;Parent=MsG0580028185.01.T02
Chr5 CDS 76280536 76280700 76280536 ID=MsG0580028185.01.T02:cds;Parent=MsG0580028185.01.T02
Chr5 CDS 76280794 76280871 76280794 ID=MsG0580028185.01.T02:cds;Parent=MsG0580028185.01.T02
Chr5 CDS 76281869 76281976 76281869 ID=MsG0580028185.01.T02:cds;Parent=MsG0580028185.01.T02
Gene Sequence

>MsG0580028185.01.T02

ATGGAAACTTTGGGTGGTAATTCATCATCATCACCATCATTATCATCAGCATCGTCGTCATCATCTTTTGGAGGGATTAATACTGATGATAACAATGGTGGTGTAACTTGGTATGGAATGAGGTTACCTGTTAACCCCTTTTTGTCACCGATTTCGTTTTTGTTGGATTATTCTGGAATTTTGCGTTCGAGTAATGATTCTGAGGGTATGATTGTCAACAACGGAGTTTCTGGTTCGGAGTTACGATCTCAGGTTGATGCTGGTGGTGCTGTTGCTGGGAGTAGTGCAGGGGAAGTTGCAATAAGGATTATTGGAGCCGGAGAGAATATTCATAATCAGGTTGGGGAAGTAGGTTATGATGATTGTGGTGAGGAGCTTATTGCTGAGAGAAGTGGAATGCCTGGATTGAGTGAGAATGATGCCGAGGGTCGTGGTGGAATTGAGGCTAGTGAAGGGGTTCCTCTTGTGTCTTCATCTTCTTTGTCGTCGCTGGCTGGTAGTGGACAGGTTGATGGTGAGGCTGCTGGGAATGGAACAGAAAATAACAGGGATTCGTCTTCTCATCAGAGATATGATATTCAGCTGGTTGCCAAGTGGATCGAGCAGATTCTTCCTTTCTCGCTTTTGTTGTTGGTTGTTTTCATTCGACAGCATTTACAAGGTTTCTTTGTCACAATTTGGATAGCAGCTGTGATGTTCAAGTCAAATGAAATTGTTAAGAAGCAGACAGCTTTGAAGGGAGATAGGAAAGTCTCTTTACTTGCTGGTATCGCTTTTGCTTTCATTCTTCATGTGATATGCATTTACTGGTGGTATCGAAATGATGATATTTTATATCCACTGGCCATGTTACCTCCTAACCCAACACCTTTCTGGCATGCAATATTCACGATCTTGGTCAATGATATATTGATGCGGCAAGTTGCAATGGCTTTTAAGTGTATCCTTCTTATATATTACAAAAAGGGGAAAGGTCATAATTTCCGTCGACAGGCTCAAATGTTAACTCTTGTTGAGTACACGCTGCTGTTGTATCGTGCCTTGTTGCCAACACCAGTCTGGTACCGGTTTTTCTTGAATAGGGAATATGGAAGTCTCTTTTCGTCACTGACCACAGGGTTGTATTTAACTTTCAAGCTAACATCTGTGGTTGAGAAGGTCCAATGCTTTATTTCTGCCTTGAAAGCATTATCAAGAAAGGAAGTTCATTACGGGGTCTATGCCACAGCAGAACAGGTTACTGCTGCCGGTGACCTATGTGCTATATGCCAAGAGAAGATGCATTCCCCTATCTTGTTGCGCTGCAAACACATTTTCTGCGAAGATTGTGTTTCTGAGTGGTGA

>MsG0580028185.01.T01

ATGGAAACTTTGGGTGGTAATTCATCATCATCACCATCATTATCATCAGCATCGTCGTCATCATCTTTTGGAGGGATTAATACTGATGATAACAATGGTGGTGTAACTTGGTATGGAATGAGGTTACCTGTTAACCCCTTTTTGTCACCGATTTCGTTTTTGTTGGATTATTCTGGAATTTTGCGTTCGAGTAATGATTCTGAGGGTATGATTGTCAACAACGGAGTTTCTGGTTCGGAGTTACGATCTCAGGTTGATGCTGGTGGTGCTGTTGCTGGGAGTAGTGCAGGGGAAGTTGCAATAAGGATTATTGGAGCCGGAGAGAATATTCATAATCAGGTTGGGGAAGTAGGTTATGATGATTGTGGTGAGGAGCTTATTGCTGAGAGAAGTGGAATGCCTGGATTGAGTGAGAATGATGCCGAGGGTCGTGGTGGAATTGAGGCTAGTGAAGGGGTTCCTCTTGTGTCTTCATCTTCTTTGTCGTCGCTGGCTGGTAGTGGACAGGTTGATGGTGAGGCTGCTGGGAATGGAACAGAAAATAACAGGGATTCGTCTTCTCATCAGAGATATGATATTCAGCTGGTTGCCAAGTGGATCGAGCAGATTCTTCCTTTCTCGCTTTTGTTGTTGGTTGTTTTCATTCGACAGCATTTACAAGGTTTCTTTGTCACAATTTGGATAGCAGCTGTGATGTTCAAGTCAAATGAAATTGTTAAGAAGCAGACAGCTTTGAAGGGAGATAGGAAAGTCTCTTTACTTGCTGGTATCGCTTTTGCTTTCATTCTTCATGTGATATGCATTTACTGGTGGTATCGAAATGATGATATTTTATATCCACTGGCCATGTTACCTCCTAACCCAACACCTTTCTGGCATGCAATATTCACGATCTTGGTCAATGATATATTGATGCGGCAAGTTGCAATGGCTTTTAAGTGTATCCTTCTTATATATTACAAAAAGGGGAAAGGTCATAATTTCCGTCGACAGGCTCAAATGTTAACTCTTGTTGAGTACACGCTGCTGTTGTATCGTGCCTTGTTGCCAACACCAGTCTGGTACCGGTTTTTCTTGAATAGGGAATATGGAAGTCTCTTTTCGTCACTGACCACAGGGTTGTATTTAACTTTCAAGCTAACATCTGTGGTTGAGAAGGTCCAATGCTTTATTTCTGCCTTGAAAGCATTATCAAGAAAGGAAGTTCATTACGGGGTCTATGCCACAGCAGAACAGGTTACTGCTGCCGGTGACCTATGTGCTATATGCCAAGAGAAGATGCATTCCCCTATCTTGTTGCGCTGCAAACACATTTTCTGCGAAGATTGTGTTTCTGAGTGGTGA

Protein sequence

>MsG0580028185.01.T02

METLGGNSSSSPSLSSASSSSSFGGINTDDNNGGVTWYGMRLPVNPFLSPISFLLDYSGILRSSNDSEGMIVNNGVSGSELRSQVDAGGAVAGSSAGEVAIRIIGAGENIHNQVGEVGYDDCGEELIAERSGMPGLSENDAEGRGGIEASEGVPLVSSSSLSSLAGSGQVDGEAAGNGTENNRDSSSHQRYDIQLVAKWIEQILPFSLLLLVVFIRQHLQGFFVTIWIAAVMFKSNEIVKKQTALKGDRKVSLLAGIAFAFILHVICIYWWYRNDDILYPLAMLPPNPTPFWHAIFTILVNDILMRQVAMAFKCILLIYYKKGKGHNFRRQAQMLTLVEYTLLLYRALLPTPVWYRFFLNREYGSLFSSLTTGLYLTFKLTSVVEKVQCFISALKALSRKEVHYGVYATAEQVTAAGDLCAICQEKMHSPILLRCKHIFCEDCVSEW*

>MsG0580028185.01.T01

METLGGNSSSSPSLSSASSSSSFGGINTDDNNGGVTWYGMRLPVNPFLSPISFLLDYSGILRSSNDSEGMIVNNGVSGSELRSQVDAGGAVAGSSAGEVAIRIIGAGENIHNQVGEVGYDDCGEELIAERSGMPGLSENDAEGRGGIEASEGVPLVSSSSLSSLAGSGQVDGEAAGNGTENNRDSSSHQRYDIQLVAKWIEQILPFSLLLLVVFIRQHLQGFFVTIWIAAVMFKSNEIVKKQTALKGDRKVSLLAGIAFAFILHVICIYWWYRNDDILYPLAMLPPNPTPFWHAIFTILVNDILMRQVAMAFKCILLIYYKKGKGHNFRRQAQMLTLVEYTLLLYRALLPTPVWYRFFLNREYGSLFSSLTTGLYLTFKLTSVVEKVQCFISALKALSRKEVHYGVYATAEQVTAAGDLCAICQEKMHSPILLRCKHIFCEDCVSEW*