Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580024476.01.T01 | XP_003611241.2 | 94.017 | 234 | 12 | 1 | 1 | 234 | 1 | 232 | 2.66E-155 | 440 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580024476.01.T01 | G7KG71 | 94.017 | 234 | 12 | 1 | 1 | 234 | 1 | 232 | 1.27e-155 | 440 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180000337.01 | MsG0580024476.01 | 0.836877 | 7.232726e-57 | 9.236242e-54 |
| MsG0380012366.01 | MsG0580024476.01 | 0.809666 | 1.690250e-50 | 9.984835e-48 |
| MsG0480018571.01 | MsG0580024476.01 | 0.823226 | 1.552274e-53 | 1.328553e-50 |
| MsG0480018904.01 | MsG0580024476.01 | 0.811189 | 7.929252e-51 | 4.876052e-48 |
| MsG0480019038.01 | MsG0580024476.01 | 0.817095 | 3.938690e-52 | 2.841484e-49 |
| MsG0480020444.01 | MsG0580024476.01 | 0.830502 | 2.833223e-55 | 2.990374e-52 |
| MsG0480022125.01 | MsG0580024476.01 | 0.830597 | 2.684647e-55 | 2.841706e-52 |
| MsG0480022274.01 | MsG0580024476.01 | 0.846553 | 2.020165e-59 | 3.490132e-56 |
| MsG0480023947.01 | MsG0580024476.01 | 0.801892 | 7.265674e-49 | 3.510110e-46 |
| MsG0580024474.01 | MsG0580024476.01 | 0.835554 | 1.568023e-56 | 1.924042e-53 |
| MsG0580024476.01 | MsG0580029583.01 | 0.815005 | 1.153850e-51 | 7.861798e-49 |
| MsG0580024476.01 | MsG0880042368.01 | 0.836194 | 1.079570e-56 | 1.350806e-53 |
| MsG0580024476.01 | MsG0880042976.01 | 0.819525 | 1.109677e-52 | 8.560236e-50 |
| MsG0580024476.01 | MsG0880043246.01 | 0.826612 | 2.466274e-54 | 2.324329e-51 |
| MsG0580024476.01 | MsG0880046088.01 | 0.818185 | 2.236812e-52 | 1.662685e-49 |
| MsG0380015404.01 | MsG0580024476.01 | 0.800772 | 1.231937e-48 | 5.784857e-46 |
| MsG0280007369.01 | MsG0580024476.01 | 0.840264 | 9.657922e-58 | 1.368275e-54 |
| MsG0280009971.01 | MsG0580024476.01 | 0.838607 | 2.601452e-57 | 3.502535e-54 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580024476.01.T01 | MTR_5g011820 | 94.017 | 234 | 12 | 1 | 1 | 234 | 1 | 232 | 3.22e-159 | 440 |
| MsG0580024476.01.T01 | MTR_5g011800 | 90.909 | 231 | 19 | 2 | 4 | 234 | 1 | 229 | 1.03e-153 | 426 |
| MsG0580024476.01.T01 | MTR_4g102220 | 58.650 | 237 | 80 | 6 | 4 | 234 | 1 | 225 | 7.66e-80 | 239 |
| MsG0580024476.01.T01 | MTR_4g024370 | 50.633 | 237 | 106 | 5 | 4 | 234 | 1 | 232 | 7.11e-73 | 221 |
| MsG0580024476.01.T01 | MTR_4g024370 | 50.633 | 237 | 106 | 5 | 4 | 234 | 1 | 232 | 7.11e-73 | 221 |
| MsG0580024476.01.T01 | MTR_6g060390 | 30.603 | 232 | 132 | 9 | 8 | 233 | 4 | 212 | 9.60e-25 | 97.8 |
| MsG0580024476.01.T01 | MTR_6g060440 | 31.034 | 232 | 129 | 10 | 8 | 233 | 4 | 210 | 6.10e-24 | 95.9 |
| MsG0580024476.01.T01 | MTR_7g117380 | 29.694 | 229 | 148 | 6 | 8 | 233 | 3 | 221 | 1.35e-20 | 87.0 |
| MsG0580024476.01.T01 | MTR_1g076800 | 27.160 | 243 | 127 | 8 | 7 | 233 | 3 | 211 | 5.41e-19 | 82.8 |
| MsG0580024476.01.T01 | MTR_4g023950 | 29.825 | 228 | 134 | 8 | 8 | 233 | 4 | 207 | 5.77e-16 | 74.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580024476.01.T01 | AT2G45360 | 53.017 | 232 | 91 | 5 | 4 | 234 | 1 | 215 | 3.54e-73 | 222 |
| MsG0580024476.01.T01 | AT3G60780 | 51.282 | 234 | 95 | 6 | 4 | 234 | 1 | 218 | 4.27e-70 | 214 |
| MsG0580024476.01.T01 | AT1G62840 | 47.083 | 240 | 102 | 8 | 4 | 234 | 1 | 224 | 1.15e-54 | 175 |
| MsG0580024476.01.T01 | AT1G12320 | 43.103 | 232 | 103 | 7 | 4 | 230 | 1 | 208 | 7.33e-45 | 149 |
Find 65 sgRNAs with CRISPR-Local
Find 75 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTATTTCTAAGATGGATTC+TGG | 0.260989 | 5:-5418140 | MsG0580024476.01.T01:CDS |
| TTTAGTAGGAATAGATTTCT+TGG | 0.332754 | 5:-5418255 | MsG0580024476.01.T01:CDS |
| TATGAATTAGTTGCTCTCTC+TGG | 0.350428 | 5:+5418578 | None:intergenic |
| AATCACCTTGTCAGTGAATC+TGG | 0.357557 | 5:-5418521 | MsG0580024476.01.T01:CDS |
| TGTTCGGTCGGTGTTTCTTC+CGG | 0.371763 | 5:-5418075 | MsG0580024476.01.T01:CDS |
| AGATGGATTCTGGTTATATA+TGG | 0.373750 | 5:-5418130 | MsG0580024476.01.T01:CDS |
| TGGTATGTCACCGGAAGTTT+TGG | 0.381944 | 5:-5418306 | MsG0580024476.01.T01:CDS |
| TGAAAGACATGAAACTTGTT+TGG | 0.393646 | 5:-5418604 | MsG0580024476.01.T01:CDS |
| ATTTCTTGGTTGTTGATTCT+CGG | 0.396616 | 5:-5418241 | MsG0580024476.01.T01:CDS |
| TCTGATCTTGACCGTTCATC+TGG | 0.402447 | 5:+5418353 | None:intergenic |
| CACGTGTTATTCATAATAGA+TGG | 0.406729 | 5:-5417974 | MsG0580024476.01.T01:CDS |
| GGTGTTTCTTCCGGTGGGGA+AGG | 0.435607 | 5:-5418066 | MsG0580024476.01.T01:CDS |
| ATGAATTAGTTGCTCTCTCT+GGG | 0.444178 | 5:+5418579 | None:intergenic |
| CGGTCGGTGTTTCTTCCGGT+GGG | 0.457893 | 5:-5418071 | MsG0580024476.01.T01:CDS |
| GAAGTGATGGATGGTTTAGT+AGG | 0.459582 | 5:-5418269 | MsG0580024476.01.T01:CDS |
| CATTTATCAGCTGCCGGTGG+TGG | 0.462107 | 5:-5418029 | MsG0580024476.01.T01:CDS |
| GGCGGAGTTTGTTTCAGCTA+TGG | 0.469299 | 5:-5418495 | MsG0580024476.01.T01:CDS |
| ATGGCGAAGCGTAGTGGCGC+GGG | 0.470110 | 5:-5418111 | MsG0580024476.01.T01:CDS |
| AAGCATGTTGATCAACGGTC+CGG | 0.476390 | 5:-5417948 | MsG0580024476.01.T01:CDS |
| AGCATGTTGATCAACGGTCC+GGG | 0.480427 | 5:-5417947 | MsG0580024476.01.T01:CDS |
| GTGTTTCTTCCGGTGGGGAA+GGG | 0.481603 | 5:-5418065 | MsG0580024476.01.T01:CDS |
| AGATTCACTGACAAGGTGAT+TGG | 0.483078 | 5:+5418523 | None:intergenic |
| GTCACGACGGCTTGTTCGGT+CGG | 0.491936 | 5:-5418087 | MsG0580024476.01.T01:CDS |
| GGTTCTCCTACCAAAACTTC+CGG | 0.492682 | 5:+5418296 | None:intergenic |
| TTTGTTTCAGCTATGGCGGC+AGG | 0.510446 | 5:-5418488 | MsG0580024476.01.T01:CDS |
| TTAGCAAAGTTGAGTTGTAA+AGG | 0.512051 | 5:-5418191 | MsG0580024476.01.T01:CDS |
| CACAGAGTTCTCACCACCAC+CGG | 0.513456 | 5:+5418016 | None:intergenic |
| ACCTGTGTGACGTGATGCTA+TGG | 0.522581 | 5:+5418397 | None:intergenic |
| TTCACTGACAAGGTGATTGG+TGG | 0.530233 | 5:+5418526 | None:intergenic |
| AAACCATCCATCACTTCCTC+CGG | 0.536217 | 5:+5418275 | None:intergenic |
| TCTAATAAAGTGAACATCCC+CGG | 0.541948 | 5:+5417929 | None:intergenic |
| AGGAGAACCGGAGGAAGTGA+TGG | 0.549491 | 5:-5418282 | MsG0580024476.01.T01:CDS |
| GGTGGGGAAGGGAATTCATA+TGG | 0.553993 | 5:-5418054 | MsG0580024476.01.T01:CDS |
| CGTTGGAATAACTCCGCCAT+GGG | 0.559266 | 5:+5418433 | None:intergenic |
| GGAGTTATTCCAACGAGTGT+TGG | 0.565148 | 5:-5418425 | MsG0580024476.01.T01:CDS |
| TCGGTCGGTGTTTCTTCCGG+TGG | 0.566963 | 5:-5418072 | MsG0580024476.01.T01:CDS |
| TGGCGAAGCGTAGTGGCGCG+GGG | 0.569786 | 5:-5418110 | MsG0580024476.01.T01:CDS |
| TTTCAGCTATGGCGGCAGGA+TGG | 0.575184 | 5:-5418484 | MsG0580024476.01.T01:CDS |
| ATGGCGCATTTATCAGCTGC+CGG | 0.576415 | 5:-5418035 | MsG0580024476.01.T01:CDS |
| CTCAGCTGATAGTAGAAACA+TGG | 0.579071 | 5:-5418457 | MsG0580024476.01.T01:CDS |
| TTATATATGGCGAAGCGTAG+TGG | 0.584131 | 5:-5418117 | MsG0580024476.01.T01:CDS |
| TGGTGAGAACTCTGTGGTGG+CGG | 0.585821 | 5:-5418009 | MsG0580024476.01.T01:CDS |
| ATATGAATTCCCTTCCCCAC+CGG | 0.588515 | 5:+5418056 | None:intergenic |
| ATGGATAAACCAACACTCGT+TGG | 0.590421 | 5:+5418416 | None:intergenic |
| GGGAGAAGCTGGTATGTCAC+CGG | 0.594972 | 5:-5418315 | MsG0580024476.01.T01:CDS |
| TCGTTGGAATAACTCCGCCA+TGG | 0.605659 | 5:+5418432 | None:intergenic |
| GGTCGGTGTTTCTTCCGGTG+GGG | 0.609408 | 5:-5418070 | MsG0580024476.01.T01:CDS |
| GAACCGGAGGAAGTGATGGA+TGG | 0.618455 | 5:-5418278 | MsG0580024476.01.T01:CDS |
| GGAGTTTGTTTCAGCTATGG+CGG | 0.620173 | 5:-5418492 | MsG0580024476.01.T01:CDS |
| TGTGTATAGTTCCAGATGAA+CGG | 0.623096 | 5:-5418364 | MsG0580024476.01.T01:CDS |
| ATAGTAGAAACATGGTCCCA+TGG | 0.627081 | 5:-5418449 | MsG0580024476.01.T01:CDS |
| GCATGTTGATCAACGGTCCG+GGG | 0.627112 | 5:-5417946 | MsG0580024476.01.T01:CDS |
| GGCGAAGCGTAGTGGCGCGG+GGG | 0.628973 | 5:-5418109 | MsG0580024476.01.T01:CDS |
| TATGGCGAAGCGTAGTGGCG+CGG | 0.632704 | 5:-5418112 | MsG0580024476.01.T01:CDS |
| TGGTGGTGAGAACTCTGTGG+TGG | 0.632865 | 5:-5418012 | MsG0580024476.01.T01:CDS |
| CCACACCAGATTCACTGACA+AGG | 0.641093 | 5:+5418516 | None:intergenic |
| GGATTAAGCATGTTGATCAA+CGG | 0.643256 | 5:-5417953 | MsG0580024476.01.T01:CDS |
| TCCATAGCATCACGTCACAC+AGG | 0.650589 | 5:-5418398 | MsG0580024476.01.T01:CDS |
| ATAGCATCACGTCACACAGG+TGG | 0.657777 | 5:-5418395 | MsG0580024476.01.T01:CDS |
| CGGTGGTGGTGAGAACTCTG+TGG | 0.659832 | 5:-5418015 | MsG0580024476.01.T01:CDS |
| CCTTGTCAGTGAATCTGGTG+TGG | 0.666939 | 5:-5418516 | MsG0580024476.01.T01:CDS |
| GCGCATTTATCAGCTGCCGG+TGG | 0.672929 | 5:-5418032 | MsG0580024476.01.T01:CDS |
| TGTCAGTGAATCTGGTGTGG+CGG | 0.676538 | 5:-5418513 | MsG0580024476.01.T01:CDS |
| TGAATTAGTTGCTCTCTCTG+GGG | 0.679617 | 5:+5418580 | None:intergenic |
| GTAGAAACATGGTCCCATGG+CGG | 0.759198 | 5:-5418446 | MsG0580024476.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGCTAATTTTATTTCTAAGA+TGG | - | Chr5:5418381-5418400 | MsG0580024476.01.T01:CDS | 20.0% |
| ! | TTTAGTAGGAATAGATTTCT+TGG | - | Chr5:5418273-5418292 | MsG0580024476.01.T01:CDS | 25.0% |
| !!! | TTTATTTCTAAGATGGATTC+TGG | - | Chr5:5418388-5418407 | MsG0580024476.01.T01:CDS | 25.0% |
| ATCAGAGTATGCAAAAAACA+TGG | - | Chr5:5418192-5418211 | MsG0580024476.01.T01:CDS | 30.0% | |
| TCAGAGTATGCAAAAAACAT+GGG | - | Chr5:5418193-5418212 | MsG0580024476.01.T01:CDS | 30.0% | |
| ! | AGATGGATTCTGGTTATATA+TGG | - | Chr5:5418398-5418417 | MsG0580024476.01.T01:CDS | 30.0% |
| ! | CACGTGTTATTCATAATAGA+TGG | - | Chr5:5418554-5418573 | MsG0580024476.01.T01:CDS | 30.0% |
| ! | TGAAAGACATGAAACTTGTT+TGG | - | Chr5:5417924-5417943 | MsG0580024476.01.T01:CDS | 30.0% |
| ! | TTAGCAAAGTTGAGTTGTAA+AGG | - | Chr5:5418337-5418356 | MsG0580024476.01.T01:CDS | 30.0% |
| !! | ATTTCTTGGTTGTTGATTCT+CGG | - | Chr5:5418287-5418306 | MsG0580024476.01.T01:CDS | 30.0% |
| !!! | AAGATTTTACAAGAGTGTTG+AGG | - | Chr5:5418314-5418333 | MsG0580024476.01.T01:CDS | 30.0% |
| ATGAATTAGTTGCTCTCTCT+GGG | + | Chr5:5417952-5417971 | None:intergenic | 35.0% | |
| GGATTAAGCATGTTGATCAA+CGG | - | Chr5:5418575-5418594 | MsG0580024476.01.T01:CDS | 35.0% | |
| TATGAATTAGTTGCTCTCTC+TGG | + | Chr5:5417953-5417972 | None:intergenic | 35.0% | |
| TCTAATAAAGTGAACATCCC+CGG | + | Chr5:5418602-5418621 | None:intergenic | 35.0% | |
| TGTGTATAGTTCCAGATGAA+CGG | - | Chr5:5418164-5418183 | MsG0580024476.01.T01:CDS | 35.0% | |
| AATCACCTTGTCAGTGAATC+TGG | - | Chr5:5418007-5418026 | MsG0580024476.01.T01:CDS | 40.0% | |
| AGATTCACTGACAAGGTGAT+TGG | + | Chr5:5418008-5418027 | None:intergenic | 40.0% | |
| ATAGTAGAAACATGGTCCCA+TGG | - | Chr5:5418079-5418098 | MsG0580024476.01.T01:CDS | 40.0% | |
| ATGGATAAACCAACACTCGT+TGG | + | Chr5:5418115-5418134 | None:intergenic | 40.0% | |
| CTCAGCTGATAGTAGAAACA+TGG | - | Chr5:5418071-5418090 | MsG0580024476.01.T01:CDS | 40.0% | |
| TGAATTAGTTGCTCTCTCTG+GGG | + | Chr5:5417951-5417970 | None:intergenic | 40.0% | |
| TTATATATGGCGAAGCGTAG+TGG | - | Chr5:5418411-5418430 | MsG0580024476.01.T01:CDS | 40.0% | |
| !! | GAAGTGATGGATGGTTTAGT+AGG | - | Chr5:5418259-5418278 | MsG0580024476.01.T01:CDS | 40.0% |
| AAACCATCCATCACTTCCTC+CGG | + | Chr5:5418256-5418275 | None:intergenic | 45.0% | |
| AAGCATGTTGATCAACGGTC+CGG | - | Chr5:5418580-5418599 | MsG0580024476.01.T01:CDS | 45.0% | |
| ATATGAATTCCCTTCCCCAC+CGG | + | Chr5:5418475-5418494 | None:intergenic | 45.0% | |
| GCAAAAAACATGGGAGAAGC+TGG | - | Chr5:5418202-5418221 | MsG0580024476.01.T01:CDS | 45.0% | |
| GGAGTTATTCCAACGAGTGT+TGG | - | Chr5:5418103-5418122 | MsG0580024476.01.T01:CDS | 45.0% | |
| GGTTCTCCTACCAAAACTTC+CGG | + | Chr5:5418235-5418254 | None:intergenic | 45.0% | |
| TCTGATCTTGACCGTTCATC+TGG | + | Chr5:5418178-5418197 | None:intergenic | 45.0% | |
| TTCACTGACAAGGTGATTGG+TGG | + | Chr5:5418005-5418024 | None:intergenic | 45.0% | |
| ! | GGAGTTTGTTTCAGCTATGG+CGG | - | Chr5:5418036-5418055 | MsG0580024476.01.T01:CDS | 45.0% |
| ! | TGGTATGTCACCGGAAGTTT+TGG | - | Chr5:5418222-5418241 | MsG0580024476.01.T01:CDS | 45.0% |
| !! | ATGTCACCGGAAGTTTTGGT+AGG | - | Chr5:5418226-5418245 | MsG0580024476.01.T01:CDS | 45.0% |
| !! | GGAAGTTTTGGTAGGAGAAC+CGG | - | Chr5:5418234-5418253 | MsG0580024476.01.T01:CDS | 45.0% |
| ACCTGTGTGACGTGATGCTA+TGG | + | Chr5:5418134-5418153 | None:intergenic | 50.0% | |
| AGCATGTTGATCAACGGTCC+GGG | - | Chr5:5418581-5418600 | MsG0580024476.01.T01:CDS | 50.0% | |
| ATAGCATCACGTCACACAGG+TGG | - | Chr5:5418133-5418152 | MsG0580024476.01.T01:CDS | 50.0% | |
| ATGGCGCATTTATCAGCTGC+CGG | - | Chr5:5418493-5418512 | MsG0580024476.01.T01:CDS | 50.0% | |
| CCACACCAGATTCACTGACA+AGG | + | Chr5:5418015-5418034 | None:intergenic | 50.0% | |
| CCTTGTCAGTGAATCTGGTG+TGG | - | Chr5:5418012-5418031 | MsG0580024476.01.T01:CDS | 50.0% | |
| CGTTGGAATAACTCCGCCAT+GGG | + | Chr5:5418098-5418117 | None:intergenic | 50.0% | |
| GGTGGGGAAGGGAATTCATA+TGG | - | Chr5:5418474-5418493 | MsG0580024476.01.T01:CDS | 50.0% | |
| GTAGAAACATGGTCCCATGG+CGG | - | Chr5:5418082-5418101 | MsG0580024476.01.T01:CDS | 50.0% | |
| TCCATAGCATCACGTCACAC+AGG | - | Chr5:5418130-5418149 | MsG0580024476.01.T01:CDS | 50.0% | |
| TCGTTGGAATAACTCCGCCA+TGG | + | Chr5:5418099-5418118 | None:intergenic | 50.0% | |
| TGTCAGTGAATCTGGTGTGG+CGG | - | Chr5:5418015-5418034 | MsG0580024476.01.T01:CDS | 50.0% | |
| TTTGTTTCAGCTATGGCGGC+AGG | - | Chr5:5418040-5418059 | MsG0580024476.01.T01:CDS | 50.0% | |
| ! | GGCGGAGTTTGTTTCAGCTA+TGG | - | Chr5:5418033-5418052 | MsG0580024476.01.T01:CDS | 50.0% |
| ! | TGTTCGGTCGGTGTTTCTTC+CGG | - | Chr5:5418453-5418472 | MsG0580024476.01.T01:CDS | 50.0% |
| !! | AGTTTTGGTAGGAGAACCGG+AGG | - | Chr5:5418237-5418256 | MsG0580024476.01.T01:CDS | 50.0% |
| AGGAGAACCGGAGGAAGTGA+TGG | - | Chr5:5418246-5418265 | MsG0580024476.01.T01:CDS | 55.0% | |
| CACAGAGTTCTCACCACCAC+CGG | + | Chr5:5418515-5418534 | None:intergenic | 55.0% | |
| CATTTATCAGCTGCCGGTGG+TGG | - | Chr5:5418499-5418518 | MsG0580024476.01.T01:CDS | 55.0% | |
| GCATGTTGATCAACGGTCCG+GGG | - | Chr5:5418582-5418601 | MsG0580024476.01.T01:CDS | 55.0% | |
| GGGAGAAGCTGGTATGTCAC+CGG | - | Chr5:5418213-5418232 | MsG0580024476.01.T01:CDS | 55.0% | |
| GTGTTTCTTCCGGTGGGGAA+GGG | - | Chr5:5418463-5418482 | MsG0580024476.01.T01:CDS | 55.0% | |
| TGGTGAGAACTCTGTGGTGG+CGG | - | Chr5:5418519-5418538 | MsG0580024476.01.T01:CDS | 55.0% | |
| TTTCAGCTATGGCGGCAGGA+TGG | - | Chr5:5418044-5418063 | MsG0580024476.01.T01:CDS | 55.0% | |
| ! | GAACCGGAGGAAGTGATGGA+TGG | - | Chr5:5418250-5418269 | MsG0580024476.01.T01:CDS | 55.0% |
| ! | TGGTGGTGAGAACTCTGTGG+TGG | - | Chr5:5418516-5418535 | MsG0580024476.01.T01:CDS | 55.0% |
| GCGCATTTATCAGCTGCCGG+TGG | - | Chr5:5418496-5418515 | MsG0580024476.01.T01:CDS | 60.0% | |
| GGTGTTTCTTCCGGTGGGGA+AGG | - | Chr5:5418462-5418481 | MsG0580024476.01.T01:CDS | 60.0% | |
| TATGGCGAAGCGTAGTGGCG+CGG | - | Chr5:5418416-5418435 | MsG0580024476.01.T01:CDS | 60.0% | |
| ! | CGGTCGGTGTTTCTTCCGGT+GGG | - | Chr5:5418457-5418476 | MsG0580024476.01.T01:CDS | 60.0% |
| ! | CGGTGGTGGTGAGAACTCTG+TGG | - | Chr5:5418513-5418532 | MsG0580024476.01.T01:CDS | 60.0% |
| ! | GGTCGGTGTTTCTTCCGGTG+GGG | - | Chr5:5418458-5418477 | MsG0580024476.01.T01:CDS | 60.0% |
| ! | GTCACGACGGCTTGTTCGGT+CGG | - | Chr5:5418441-5418460 | MsG0580024476.01.T01:CDS | 60.0% |
| ! | TCGGTCGGTGTTTCTTCCGG+TGG | - | Chr5:5418456-5418475 | MsG0580024476.01.T01:CDS | 60.0% |
| ATGGCGAAGCGTAGTGGCGC+GGG | - | Chr5:5418417-5418436 | MsG0580024476.01.T01:CDS | 65.0% | |
| ! | GGGGGTCACGACGGCTTGTT+CGG | - | Chr5:5418437-5418456 | MsG0580024476.01.T01:CDS | 65.0% |
| TAGTGGCGCGGGGGTCACGA+CGG | - | Chr5:5418428-5418447 | MsG0580024476.01.T01:CDS | 70.0% | |
| TGGCGAAGCGTAGTGGCGCG+GGG | - | Chr5:5418418-5418437 | MsG0580024476.01.T01:CDS | 70.0% | |
| GGCGAAGCGTAGTGGCGCGG+GGG | - | Chr5:5418419-5418438 | MsG0580024476.01.T01:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr5 | gene | 5417923 | 5418627 | 5417923 | ID=MsG0580024476.01;Name=MsG0580024476.01 |
| Chr5 | mRNA | 5417923 | 5418627 | 5417923 | ID=MsG0580024476.01.T01;Parent=MsG0580024476.01;Name=MsG0580024476.01.T01;_AED=0.46;_eAED=0.46;_QI=0|-1|0|1|-1|1|1|0|234 |
| Chr5 | exon | 5417923 | 5418627 | 5417923 | ID=MsG0580024476.01.T01:exon:25662;Parent=MsG0580024476.01.T01 |
| Chr5 | CDS | 5417923 | 5418627 | 5417923 | ID=MsG0580024476.01.T01:cds;Parent=MsG0580024476.01.T01 |
| Gene Sequence |
| Protein sequence |
