AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480020444.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480020444.01.T01 MTR_4g051622 97.080 137 4 0 229 365 119 255 2.68e-91 278
MsG0480020444.01.T01 MTR_4g051622 91.139 79 7 0 73 151 29 107 7.32e-42 150
MsG0480020444.01.T01 MTR_4g051645 45.675 289 90 6 78 365 37 259 4.69e-72 229
MsG0480020444.01.T01 MTR_2g061440 55.000 80 36 0 248 327 193 272 3.62e-18 86.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480020444.01.T01 AT5G22140 65.217 138 48 0 228 365 72 209 5.00e-59 194
MsG0480020444.01.T01 AT5G22140 70.175 57 17 0 91 147 1 57 1.06e-18 86.3
MsG0480020444.01.T01 AT3G44190 65.217 138 48 0 228 365 72 209 8.38e-59 193
MsG0480020444.01.T01 AT3G44190 59.016 61 25 0 91 151 1 61 4.24e-17 81.6
MsG0480020444.01.T01 AT5G22140 65.217 138 48 0 228 365 126 263 2.92e-58 194
MsG0480020444.01.T01 AT5G22140 65.476 84 29 0 64 147 28 111 1.51e-27 112
MsG0480020444.01.T01 AT3G44190 65.217 138 48 0 228 365 126 263 3.35e-58 194
MsG0480020444.01.T01 AT3G44190 62.025 79 30 0 73 151 37 115 1.54e-25 106

Find 63 sgRNAs with CRISPR-Local

Find 357 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTAAATCTCTCGAGTACTTT+TGG 0.256277 4:-41605661 MsG0480020444.01.T01:CDS
AATGTCTTTCTTGAAGCTTT+TGG 0.265463 4:+41602554 None:intergenic
ACTCCTTCACAAATGAAAAT+AGG 0.292255 4:-41602475 MsG0480020444.01.T01:CDS
CTTCAAGAAAGACATTAAAA+TGG 0.321115 4:-41602547 MsG0480020444.01.T01:CDS
TTCAGATTCAGTTATGTTGA+TGG 0.355713 4:+41603192 None:intergenic
TCAAGATTGCTAGAATATAT+TGG 0.361205 4:-41602578 MsG0480020444.01.T01:CDS
ATCCGATGGAAACCTATCTA+AGG 0.382904 4:-41607506 None:intergenic
CCGTTGGTTATACCTTAGAT+AGG 0.387851 4:+41607494 None:intergenic
ATTGCTTACCTCCTTTGTAT+TGG 0.393585 4:+41603072 None:intergenic
GATTATCTTGTTATCGCAAC+TGG 0.394119 4:-41603136 MsG0480020444.01.T01:CDS
GTCAGCATGTTGGTGTTGTT+TGG 0.396407 4:-41602974 MsG0480020444.01.T01:intron
CTCTCAAGTATTCATCAACT+TGG 0.419612 4:+41602324 None:intergenic
TTTCGCTATTGGAGACATTA+CGG 0.432085 4:-41602283 MsG0480020444.01.T01:CDS
ATCCCGATGGGTTTAAATTG+AGG 0.439683 4:-41603609 MsG0480020444.01.T01:CDS
GGTGGAGGGGTATGAAATGT+TGG 0.452321 4:+41605622 None:intergenic
ATTGTTGGTGGAGGTCCAAC+TGG 0.452939 4:-41602668 MsG0480020444.01.T01:CDS
TGCGATAACAAGATAATCAT+AGG 0.469385 4:+41603141 None:intergenic
CATAGAGAATATTTCACAAA+AGG 0.477184 4:-41603235 MsG0480020444.01.T01:CDS
GATGAATACTTGAGAGTGAA+GGG 0.482045 4:-41602317 MsG0480020444.01.T01:CDS
CATTAAAATGGCTTCAATCA+AGG 0.485208 4:-41602535 MsG0480020444.01.T01:CDS
TCGATTTCATATGAGTGATA+AGG 0.486534 4:-41602747 MsG0480020444.01.T01:CDS
AGGACTTATCAAACTTCGGT+TGG 0.486951 4:-41602455 MsG0480020444.01.T01:CDS
AAAGTGACTATAGTGCATAA+AGG 0.487929 4:-41602602 MsG0480020444.01.T01:CDS
CCTAGCCATGCTGTGGAAAG+TGG 0.493960 4:+41602389 None:intergenic
AAAGATGATTTGGATGGTCA+TGG 0.509883 4:-41602353 MsG0480020444.01.T01:CDS
CAAGCACAATAGTGGTCGTT+GGG 0.510324 4:+41602859 None:intergenic
TACCTTAGATAGGTTTCCAT+CGG 0.510876 4:+41607504 None:intergenic
AACCTCAATTTAAACCCATC+GGG 0.512740 4:+41603607 None:intergenic
TGATGAATACTTGAGAGTGA+AGG 0.525012 4:-41602318 MsG0480020444.01.T01:CDS
GATCACTGTCCTTTCTGCGA+AGG 0.531450 4:+41603261 None:intergenic
CAGTTTCATTATGATCCCGA+TGG 0.533597 4:-41603622 MsG0480020444.01.T01:CDS
CCACCTGCTCTTTCGACAAG+TGG 0.538114 4:-41605604 MsG0480020444.01.T01:intron
TCTGAAGTCTTCACTGCTGA+TGG 0.538947 4:-41603175 MsG0480020444.01.T01:CDS
GTGGAGGGGTATGAAATGTT+GGG 0.540477 4:+41605623 None:intergenic
GCAAGCACAATAGTGGTCGT+TGG 0.545891 4:+41602858 None:intergenic
CAACCTCAATTTAAACCCAT+CGG 0.547301 4:+41603606 None:intergenic
GTTGTTTGGTTGCGATTGAA+CGG 0.551194 4:-41602960 MsG0480020444.01.T01:CDS
ACTGTCCTTTCTGCGAAGGA+TGG 0.552774 4:+41603265 None:intergenic
AAATAGGACTTATCAAACTT+CGG 0.554684 4:-41602459 MsG0480020444.01.T01:CDS
TGGAGCCATCCTTCGCAGAA+AGG 0.564663 4:-41603270 MsG0480020444.01.T01:CDS
AGTTTCATTATGATCCCGAT+GGG 0.564869 4:-41603621 MsG0480020444.01.T01:CDS
GGCAAGTTTGAGAGCAATGG+TGG 0.564940 4:-41603290 MsG0480020444.01.T01:CDS
ATGGGCAAGTTTGAGAGCAA+TGG 0.572076 4:-41603293 MsG0480020444.01.T01:CDS
TCGCACAGCAAGCACAATAG+TGG 0.572088 4:+41602851 None:intergenic
TTGTCGAAAGAGCAGGTGGA+GGG 0.584264 4:+41605608 None:intergenic
ATTGCTCTCAAACTTGCCCA+TGG 0.588281 4:+41603295 None:intergenic
ATACCACTTGTCGAAAGAGC+AGG 0.588347 4:+41605601 None:intergenic
CCACTTTCCACAGCATGGCT+AGG 0.590873 4:-41602389 MsG0480020444.01.T01:CDS
CTTGTCGAAAGAGCAGGTGG+AGG 0.594140 4:+41605607 None:intergenic
GCTGCTAGCTCAACACCAGT+TGG 0.599083 4:+41602653 None:intergenic
CATTGACGCAGTCAGCATGT+TGG 0.618536 4:-41602984 MsG0480020444.01.T01:intron
CCACTTGTCGAAAGAGCAGG+TGG 0.622870 4:+41605604 None:intergenic
GAAAGACTTGACCAATACAA+AGG 0.625608 4:-41603083 MsG0480020444.01.T01:CDS
AAGATGATTTGGATGGTCAT+GGG 0.626015 4:-41602352 MsG0480020444.01.T01:CDS
AGTTTCACCTAGCCATGCTG+TGG 0.627017 4:+41602382 None:intergenic
GATAATCATAGGTGATCTGA+CGG 0.632076 4:+41603152 None:intergenic
GGAAACCACTTTCCACAGCA+TGG 0.632481 4:-41602394 MsG0480020444.01.T01:CDS
TGTCGAAAGAGCAGGTGGAG+GGG 0.634161 4:+41605609 None:intergenic
TGAGCTAGCAGCAGAGATTG+CGG 0.644801 4:-41602642 MsG0480020444.01.T01:CDS
TGATGGCACTTGATATAACA+AGG 0.655923 4:+41603209 None:intergenic
AGACTTGACCAATACAAAGG+AGG 0.681103 4:-41603080 MsG0480020444.01.T01:intron
ATGATTTGGATGGTCATGGG+AGG 0.683773 4:-41602349 MsG0480020444.01.T01:CDS
GAATACTTGAGAGTGAAGGG+AGG 0.716200 4:-41602314 MsG0480020444.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ACATGATTTAATTTTAAAAA+GGG - Chr4:41605529-41605548 MsG0480020444.01.T01:intron 10.0%
!!! TACATGATTTAATTTTAAAA+AGG - Chr4:41605528-41605547 MsG0480020444.01.T01:intron 10.0%
!! ACATTAACAAAAGATAAAAA+TGG + Chr4:41604490-41604509 None:intergenic 15.0%
!! CAAATCATAGAATTTATAAA+CGG + Chr4:41602975-41602994 None:intergenic 15.0%
!! TAAAATATAAAACTAACACA+AGG + Chr4:41605866-41605885 None:intergenic 15.0%
!!! TATATTTTAAAAGACTTTGT+CGG - Chr4:41605877-41605896 MsG0480020444.01.T01:intron 15.0%
!!! TCTTAGAAATTTTTCTTAAT+AGG - Chr4:41604262-41604281 MsG0480020444.01.T01:intron 15.0%
!! AACATATAATCAACTAGAAT+TGG - Chr4:41603348-41603367 MsG0480020444.01.T01:intron 20.0%
!! CAATTTAAAAAAATTCGAGA+AGG - Chr4:41605758-41605777 MsG0480020444.01.T01:intron 20.0%
!! GATATGATAGTCATAAAAAA+TGG + Chr4:41605571-41605590 None:intergenic 20.0%
!! TAAAGATGAAATCAAATTCT+TGG - Chr4:41603767-41603786 MsG0480020444.01.T01:intron 20.0%
!!! AACTTTTTTGAAAGATGATT+TGG - Chr4:41607409-41607428 MsG0480020444.01.T01:intron 20.0%
!!! AGAATGATGGAAATATTTTA+TGG + Chr4:41604000-41604019 None:intergenic 20.0%
!!! ATACACATTTTCTATGTATA+GGG - Chr4:41607357-41607376 MsG0480020444.01.T01:intron 20.0%
!!! CTTCTCGAATTTTTTTAAAT+TGG + Chr4:41605760-41605779 None:intergenic 20.0%
!!! GAATGATGGAAATATTTTAT+GGG + Chr4:41603999-41604018 None:intergenic 20.0%
!!! TACTGTAAATAAAGAGTATA+TGG + Chr4:41605386-41605405 None:intergenic 20.0%
!!! TATTTTGTATGCTTGAAATA+AGG + Chr4:41604451-41604470 None:intergenic 20.0%
!!! TGAGAGATATTATTTGATTT+TGG + Chr4:41603898-41603917 None:intergenic 20.0%
!!! TTTTTCTCTTACAAATGAAT+TGG + Chr4:41605112-41605131 None:intergenic 20.0%
! AAATAGGACTTATCAAACTT+CGG - Chr4:41607313-41607332 MsG0480020444.01.T01:intron 25.0%
! AACAAAAGATAAAAATGGTG+AGG + Chr4:41604485-41604504 None:intergenic 25.0%
! AATCAAATTCTTGGATGATA+AGG - Chr4:41603776-41603795 MsG0480020444.01.T01:intron 25.0%
! AGACTTATAATAAGAGACTA+AGG + Chr4:41605979-41605998 None:intergenic 25.0%
! AGCAAAAGTTGTTAAGTATT+AGG - Chr4:41604817-41604836 MsG0480020444.01.T01:intron 25.0%
! ATGAATATCAGATGAATTTC+TGG + Chr4:41604649-41604668 None:intergenic 25.0%
! ATGAATCAGATAAGAAGAAA+AGG + Chr4:41605081-41605100 None:intergenic 25.0%
! ATGATAGTCATAAAAAATGG+AGG + Chr4:41605568-41605587 None:intergenic 25.0%
! CAACACATAAAGAAATAGAT+GGG - Chr4:41605694-41605713 MsG0480020444.01.T01:CDS 25.0%
! CATAGAGAATATTTCACAAA+AGG - Chr4:41606537-41606556 MsG0480020444.01.T01:intron 25.0%
! CATCATTTAAACATAACTCA+TGG - Chr4:41603317-41603336 MsG0480020444.01.T01:CDS 25.0%
! CTTCAAGAAAGACATTAAAA+TGG - Chr4:41607225-41607244 MsG0480020444.01.T01:intron 25.0%
! GGAATTGTTAATTAATTGCA+TGG + Chr4:41606765-41606784 None:intergenic 25.0%
! TACAGAACAAGTTCAATATA+AGG + Chr4:41606400-41606419 None:intergenic 25.0%
! TATCATATCTACTTAAGTAG+AGG - Chr4:41605582-41605601 MsG0480020444.01.T01:intron 25.0%
! TCAACACATAAAGAAATAGA+TGG - Chr4:41605693-41605712 MsG0480020444.01.T01:CDS 25.0%
! TCAAGATTGCTAGAATATAT+TGG - Chr4:41607194-41607213 MsG0480020444.01.T01:intron 25.0%
! TCACTTATGTTATGAAAAGT+TGG - Chr4:41606011-41606030 MsG0480020444.01.T01:intron 25.0%
! TGAAGATGAATTAAAGCATA+AGG + Chr4:41604599-41604618 None:intergenic 25.0%
! TGAATATCAGATGAATTTCT+GGG + Chr4:41604648-41604667 None:intergenic 25.0%
! TGATAGTCATAAAAAATGGA+GGG + Chr4:41605567-41605586 None:intergenic 25.0%
! TTCATGGAAAATAAGAATGA+TGG + Chr4:41604013-41604032 None:intergenic 25.0%
!! CTTTTGTGAAATATTCTCTA+TGG + Chr4:41606539-41606558 None:intergenic 25.0%
!! GATACACATTTTCTATGTAT+AGG - Chr4:41607356-41607375 MsG0480020444.01.T01:intron 25.0%
!! TATTGAACTTGTTCTGTAAA+TGG - Chr4:41606402-41606421 MsG0480020444.01.T01:intron 25.0%
!!! AAAAATCTCATCTAGCTTTA+AGG - Chr4:41605127-41605146 MsG0480020444.01.T01:intron 25.0%
!!! AAAATCTCATCTAGCTTTAA+GGG - Chr4:41605128-41605147 MsG0480020444.01.T01:intron 25.0%
!!! ACTATAGTCACTTTTTTATC+AGG + Chr4:41607164-41607183 None:intergenic 25.0%
!!! AGATCAAGACTTTTAAGTTA+AGG + Chr4:41602506-41602525 None:intergenic 25.0%
!!! GTTTTCACTTATTTTTCTAC+TGG + Chr4:41603015-41603034 None:intergenic 25.0%
!!! TCTCTAAAACCTTTATATTG+TGG - Chr4:41606295-41606314 MsG0480020444.01.T01:intron 25.0%
!!! TTTTTGAAAGATGATTTGGA+TGG - Chr4:41607413-41607432 MsG0480020444.01.T01:intron 25.0%
AAAAACTATGCACACACTAT+TGG + Chr4:41604532-41604551 None:intergenic 30.0%
AAACCTTTATATTGTGGTTG+TGG - Chr4:41606301-41606320 MsG0480020444.01.T01:intron 30.0%
AAAGATTTAACCCTAAGTCA+AGG + Chr4:41605816-41605835 None:intergenic 30.0%
AAAGTGACTATAGTGCATAA+AGG - Chr4:41607170-41607189 MsG0480020444.01.T01:intron 30.0%
AACCTTTATATTGTGGTTGT+GGG - Chr4:41606302-41606321 MsG0480020444.01.T01:intron 30.0%
ACAGAATCTATCCAAAAACT+AGG - Chr4:41606663-41606682 MsG0480020444.01.T01:intron 30.0%
ACATTCATACATATGAACCT+AGG - Chr4:41604694-41604713 MsG0480020444.01.T01:intron 30.0%
ACTCCTTCACAAATGAAAAT+AGG - Chr4:41607297-41607316 MsG0480020444.01.T01:intron 30.0%
AGGTCAAGAAACTCTATAAA+AGG - Chr4:41604883-41604902 MsG0480020444.01.T01:intron 30.0%
ATAATCAACTAGAATTGGCT+TGG - Chr4:41603353-41603372 MsG0480020444.01.T01:intron 30.0%
ATCAGATAAGAAGAAAAGGA+AGG + Chr4:41605077-41605096 None:intergenic 30.0%
ATGAATGTCAGATGAATTTC+TGG + Chr4:41604682-41604701 None:intergenic 30.0%
ATTGCATCATTCTCTTGTAA+GGG - Chr4:41604368-41604387 MsG0480020444.01.T01:intron 30.0%
CAATCTTAGCATGTATTACA+AGG + Chr4:41602861-41602880 None:intergenic 30.0%
CATTAAAATGGCTTCAATCA+AGG - Chr4:41607237-41607256 MsG0480020444.01.T01:intron 30.0%
CTTGCTCAAAGTTGTATTTA+CGG - Chr4:41605937-41605956 MsG0480020444.01.T01:intron 30.0%
GAGTATATGGATAGAAGATT+AGG + Chr4:41605373-41605392 None:intergenic 30.0%
GATGAATTAAAGCATAAGGT+TGG + Chr4:41604595-41604614 None:intergenic 30.0%
GGTCAAGAAACTCTATAAAA+GGG - Chr4:41604884-41604903 MsG0480020444.01.T01:intron 30.0%
GTCAAGAAACTCTATAAAAG+GGG - Chr4:41604885-41604904 MsG0480020444.01.T01:intron 30.0%
TAATTAGAGTTGTTGAACAC+AGG - Chr4:41606436-41606455 MsG0480020444.01.T01:intron 30.0%
TAGATATCTCTTCACATAGA+AGG + Chr4:41602622-41602641 None:intergenic 30.0%
TATTTACCAACCAAGACAAA+AGG + Chr4:41604427-41604446 None:intergenic 30.0%
TCGATTTCATATGAGTGATA+AGG - Chr4:41607025-41607044 MsG0480020444.01.T01:intron 30.0%
TGAATGTCAGATGAATTTCT+GGG + Chr4:41604681-41604700 None:intergenic 30.0%
TGCGATAACAAGATAATCAT+AGG + Chr4:41606634-41606653 None:intergenic 30.0%
TGGTAAAATGTTGACAAATG+CGG - Chr4:41606222-41606241 MsG0480020444.01.T01:intron 30.0%
TTAGGGTTAAATCTTTGACT+CGG - Chr4:41605820-41605839 MsG0480020444.01.T01:intron 30.0%
TTATAAACGGCTTGAAACTT+GGG + Chr4:41602962-41602981 None:intergenic 30.0%
TTATGTGTTGAGTTCCTTTA+TGG + Chr4:41605684-41605703 None:intergenic 30.0%
TTCAAGATCATAGTGAAGAA+TGG + Chr4:41603726-41603745 None:intergenic 30.0%
TTCAGATTCAGTTATGTTGA+TGG + Chr4:41606583-41606602 None:intergenic 30.0%
TTGCTCAAAGTTGTATTTAC+GGG - Chr4:41605938-41605957 MsG0480020444.01.T01:intron 30.0%
TTTATAAACGGCTTGAAACT+TGG + Chr4:41602963-41602982 None:intergenic 30.0%
! AAGTGGTATGTTTTCAACAT+TGG - Chr4:41604185-41604204 MsG0480020444.01.T01:intron 30.0%
! AATGTCTTTCTTGAAGCTTT+TGG + Chr4:41607221-41607240 None:intergenic 30.0%
! AGTCCTATTTTCATTTGTGA+AGG + Chr4:41607303-41607322 None:intergenic 30.0%
! GTTTTCAAACTGATAGAAGA+AGG + Chr4:41604339-41604358 None:intergenic 30.0%
! TAATCAACTAGAATTGGCTT+GGG - Chr4:41603354-41603373 MsG0480020444.01.T01:intron 30.0%
! TTAAATCTCTCGAGTACTTT+TGG - Chr4:41604111-41604130 MsG0480020444.01.T01:intron 30.0%
! TTGAACTTCAGAGTGTTTAT+GGG + Chr4:41604777-41604796 None:intergenic 30.0%
! TTTGAACTTCAGAGTGTTTA+TGG + Chr4:41604778-41604797 None:intergenic 30.0%
! TTTTTCTACTGGAACAAGTT+TGG + Chr4:41603004-41603023 None:intergenic 30.0%
!! AGAGTTTTAGCCGAATTATT+CGG + Chr4:41602828-41602847 None:intergenic 30.0%
!! CTTTAAGGGTATTAAAGTGT+AGG - Chr4:41605142-41605161 MsG0480020444.01.T01:intron 30.0%
!!! GTTTCACTCTTTGAGATTTT+AGG + Chr4:41605020-41605039 None:intergenic 30.0%
AAAATTCGAGAAGGTCCTAT+TGG - Chr4:41605767-41605786 MsG0480020444.01.T01:intron 35.0%
AACCTCAATTTAAACCCATC+GGG + Chr4:41606168-41606187 None:intergenic 35.0%
AAGACAAAAGGTGGATCAAA+GGG + Chr4:41604415-41604434 None:intergenic 35.0%
AATATTCTGATACTGACAGG+CGG - Chr4:41604061-41604080 MsG0480020444.01.T01:intron 35.0%
ACAAGAAGTTCACACAATGT+GGG + Chr4:41605346-41605365 None:intergenic 35.0%
ACAAGATTAAACATCCCCAA+TGG - Chr4:41603424-41603443 MsG0480020444.01.T01:intron 35.0%
ACAGGTTGTAATTGTTCCAA+GGG - Chr4:41605236-41605255 MsG0480020444.01.T01:intron 35.0%
AGCACATAGTTTACTCTAGT+CGG + Chr4:41602592-41602611 None:intergenic 35.0%
AGTTTCATTATGATCCCGAT+GGG - Chr4:41606151-41606170 MsG0480020444.01.T01:intron 35.0%
ATAAGAGCTAAGTGTCATAC+GGG + Chr4:41602666-41602685 None:intergenic 35.0%
ATTGCTTACCTCCTTTGTAT+TGG + Chr4:41606703-41606722 None:intergenic 35.0%
CAACCTCAATTTAAACCCAT+CGG + Chr4:41606169-41606188 None:intergenic 35.0%
CAAGATTAAACATCCCCAAT+GGG - Chr4:41603425-41603444 MsG0480020444.01.T01:intron 35.0%
CATAAGAGCTAAGTGTCATA+CGG + Chr4:41602667-41602686 None:intergenic 35.0%
CATTGCATCATTCTCTTGTA+AGG - Chr4:41604367-41604386 MsG0480020444.01.T01:intron 35.0%
CGTAAATACAACTTTGAGCA+AGG + Chr4:41605939-41605958 None:intergenic 35.0%
CTCTCAAGTATTCATCAACT+TGG + Chr4:41607451-41607470 None:intergenic 35.0%
CTTAGCATGTATTACAAGGA+TGG + Chr4:41602857-41602876 None:intergenic 35.0%
GAAAGACTTGACCAATACAA+AGG - Chr4:41606689-41606708 MsG0480020444.01.T01:intron 35.0%
GAATCAAGTGCAAACATTAG+AGG + Chr4:41603468-41603487 None:intergenic 35.0%
GAGCATATTATGTCAGTTGT+TGG + Chr4:41605633-41605652 None:intergenic 35.0%
GATAATCATAGGTGATCTGA+CGG + Chr4:41606623-41606642 None:intergenic 35.0%
GATCCTTGCATCATTAATCA+TGG + Chr4:41602884-41602903 None:intergenic 35.0%
GATGAATACTTGAGAGTGAA+GGG - Chr4:41607455-41607474 MsG0480020444.01.T01:intron 35.0%
GCAATATACTCTTGTGATCA+TGG - Chr4:41604222-41604241 MsG0480020444.01.T01:intron 35.0%
GGTAATATTCTGATACTGAC+AGG - Chr4:41604058-41604077 MsG0480020444.01.T01:intron 35.0%
TACAGGTTGTAATTGTTCCA+AGG - Chr4:41605235-41605254 MsG0480020444.01.T01:intron 35.0%
TCAAGAAACAAAGAGAAGCA+TGG + Chr4:41603584-41603603 None:intergenic 35.0%
TGATGAATACTTGAGAGTGA+AGG - Chr4:41607454-41607473 MsG0480020444.01.T01:intron 35.0%
TGATGGCACTTGATATAACA+AGG + Chr4:41606566-41606585 None:intergenic 35.0%
TTCCATGAACTTAAATCCTC+TGG - Chr4:41604024-41604043 MsG0480020444.01.T01:intron 35.0%
TTGCCATGATTAATGATGCA+AGG - Chr4:41602878-41602897 MsG0480020444.01.T01:CDS 35.0%
TTGTTAAGTATTAGGACACG+TGG - Chr4:41604825-41604844 MsG0480020444.01.T01:intron 35.0%
TTTCGCTATTGGAGACATTA+CGG - Chr4:41607489-41607508 MsG0480020444.01.T01:intron 35.0%
! AAAGATGATTTGGATGGTCA+TGG - Chr4:41607419-41607438 MsG0480020444.01.T01:intron 35.0%
! AAGATGATTTGGATGGTCAT+GGG - Chr4:41607420-41607439 MsG0480020444.01.T01:intron 35.0%
! ACTTGGGTTTATGGCATTTT+CGG + Chr4:41602946-41602965 None:intergenic 35.0%
! ATCTGTCACTTGACACAAAT+AGG + Chr4:41606995-41607014 None:intergenic 35.0%
! CCTATCTAAGGTATAACCAA+CGG - Chr4:41602278-41602297 MsG0480020444.01.T01:CDS 35.0%
! GACCTCTAAAGATATTTCTC+TGG - Chr4:41605913-41605932 MsG0480020444.01.T01:intron 35.0%
! GATTATCTTGTTATCGCAAC+TGG - Chr4:41606636-41606655 MsG0480020444.01.T01:intron 35.0%
! TCTGTCACTTGACACAAATA+GGG + Chr4:41606994-41607013 None:intergenic 35.0%
! TGCTACGAACTTTTATACTG+TGG - Chr4:41606202-41606221 MsG0480020444.01.T01:intron 35.0%
! TTCTTTCTCTCTCTAGGTTT+TGG + Chr4:41603851-41603870 None:intergenic 35.0%
!! AAAGCTTCTCAAGTTGAAAC+TGG + Chr4:41605502-41605521 None:intergenic 35.0%
!! AAGCTTCTCAAGTTGAAACT+GGG + Chr4:41605501-41605520 None:intergenic 35.0%
!! AATCAACTAGAATTGGCTTG+GGG - Chr4:41603355-41603374 MsG0480020444.01.T01:intron 35.0%
!! AGTCTTTCAGTCCTAGTTTT+TGG + Chr4:41606677-41606696 None:intergenic 35.0%
!! GAGTTTTAGCCGAATTATTC+GGG + Chr4:41602827-41602846 None:intergenic 35.0%
!! GTATGAGTTGATGCATTACA+GGG + Chr4:41603283-41603302 None:intergenic 35.0%
!! TGTATGAGTTGATGCATTAC+AGG + Chr4:41603284-41603303 None:intergenic 35.0%
!!! AGGAGTATTTTGAGATTCCA+TGG - Chr4:41606460-41606479 MsG0480020444.01.T01:intron 35.0%
!!! GGAGTATTTTGAGATTCCAT+GGG - Chr4:41606461-41606480 MsG0480020444.01.T01:intron 35.0%
AAGAGAACCTCAAGAGGTTA+GGG + Chr4:41603663-41603682 None:intergenic 40.0%
AGACTTGACCAATACAAAGG+AGG - Chr4:41606692-41606711 MsG0480020444.01.T01:intron 40.0%
AGCCCACAACCACAATATAA+AGG + Chr4:41606307-41606326 None:intergenic 40.0%
AGGACCTTATCATAGCCAAT+AGG + Chr4:41605785-41605804 None:intergenic 40.0%
AGGACTTATCAAACTTCGGT+TGG - Chr4:41607317-41607336 MsG0480020444.01.T01:intron 40.0%
AGGTTTCCATTAGGTGAAAC+GGG + Chr4:41602341-41602360 None:intergenic 40.0%
AGTGTCGTATTAAACACGCT+TGG + Chr4:41603949-41603968 None:intergenic 40.0%
AGTTCCATAGATAGACCCAT+TGG + Chr4:41603443-41603462 None:intergenic 40.0%
ATATTCTGATACTGACAGGC+GGG - Chr4:41604062-41604081 MsG0480020444.01.T01:intron 40.0%
ATGAGCTTCAAAATGCTCCT+AGG + Chr4:41604714-41604733 None:intergenic 40.0%
ATGATAAGGAGAAGAGAGGA+AGG - Chr4:41603790-41603809 MsG0480020444.01.T01:intron 40.0%
ATTAAACACGCTTGGAGCAA+GGG + Chr4:41603941-41603960 None:intergenic 40.0%
CAAGACAAAAGGTGGATCAA+AGG + Chr4:41604416-41604435 None:intergenic 40.0%
CACAAGAAGTTCACACAATG+TGG + Chr4:41605347-41605366 None:intergenic 40.0%
CACATCCTAACAACTACAAG+AGG - Chr4:41604863-41604882 MsG0480020444.01.T01:intron 40.0%
CAGTTTCATTATGATCCCGA+TGG - Chr4:41606150-41606169 MsG0480020444.01.T01:intron 40.0%
CATAGTGAAGAATGGAAGCT+TGG + Chr4:41603718-41603737 None:intergenic 40.0%
CTGCATCAATTGCTAGAACT+TGG - Chr4:41606736-41606755 MsG0480020444.01.T01:intron 40.0%
CTTGACCTCTTGTAGTTGTT+AGG + Chr4:41604871-41604890 None:intergenic 40.0%
CTTGCTTACTAAGTGACATG+CGG - Chr4:41602404-41602423 MsG0480020444.01.T01:CDS 40.0%
CTTGGTGAAAGAAAGAGTAG+TGG - Chr4:41603680-41603699 MsG0480020444.01.T01:intron 40.0%
CTTGGTTCAACTCAAATCCA+TGG - Chr4:41603533-41603552 MsG0480020444.01.T01:intron 40.0%
CTTGTGTGACTTAGCAAAAG+AGG - Chr4:41605186-41605205 MsG0480020444.01.T01:intron 40.0%
GAGGTTTCCATTAGGTGAAA+CGG + Chr4:41602342-41602361 None:intergenic 40.0%
GATTTAACCCTAAGTCAAGG+AGG + Chr4:41605813-41605832 None:intergenic 40.0%
GGCCAGAGAAATATCTTTAG+AGG + Chr4:41605918-41605937 None:intergenic 40.0%
GGGGATGTTTAATCTTGTGA+AGG + Chr4:41603422-41603441 None:intergenic 40.0%
GTTCCATAGATAGACCCATT+GGG + Chr4:41603442-41603461 None:intergenic 40.0%
GTTCTTGACAAGCTATGTCA+AGG - Chr4:41602768-41602787 MsG0480020444.01.T01:intron 40.0%
GTTGTTTGGTTGCGATTGAA+CGG - Chr4:41606812-41606831 MsG0480020444.01.T01:intron 40.0%
TAGAGTTGTTGAACACAGGA+AGG - Chr4:41606440-41606459 MsG0480020444.01.T01:intron 40.0%
TATTAAACACGCTTGGAGCA+AGG + Chr4:41603942-41603961 None:intergenic 40.0%
TCCAAGGGAACAAAGTTGTA+CGG - Chr4:41605251-41605270 MsG0480020444.01.T01:intron 40.0%
TCCTTGCTACCCGAATAATT+CGG - Chr4:41602815-41602834 MsG0480020444.01.T01:intron 40.0%
TGAAGAATGGAAGCTTGGTT+TGG + Chr4:41603713-41603732 None:intergenic 40.0%
TGGTTCAAGAGGTTTCCATT+AGG + Chr4:41602350-41602369 None:intergenic 40.0%
TGTAAGGGTCCTTATTCTGA+CGG - Chr4:41604383-41604402 MsG0480020444.01.T01:intron 40.0%
TGTTGAGTTCCTTTATGGTC+AGG + Chr4:41605679-41605698 None:intergenic 40.0%
TTACCAACCAAGACAAAAGG+TGG + Chr4:41604424-41604443 None:intergenic 40.0%
TTCCATAGATAGACCCATTG+GGG + Chr4:41603441-41603460 None:intergenic 40.0%
TTCTTAATAGGCGAAGCAAG+TGG - Chr4:41604274-41604293 MsG0480020444.01.T01:intron 40.0%
TTGCTTACTAAGTGACATGC+GGG - Chr4:41602405-41602424 MsG0480020444.01.T01:CDS 40.0%
TTGGATGATAAGGAGAAGAG+AGG - Chr4:41603786-41603805 MsG0480020444.01.T01:intron 40.0%
! AAAGAGAAGCATGGAAGAAG+TGG + Chr4:41603575-41603594 None:intergenic 40.0%
! AAGAGAAGCATGGAAGAAGT+GGG + Chr4:41603574-41603593 None:intergenic 40.0%
! ACTAGCTATCTCTTTTACCC+CGG - Chr4:41602553-41602572 MsG0480020444.01.T01:CDS 40.0%
! AGAGTGTTTATGGGTTCATC+AGG + Chr4:41604768-41604787 None:intergenic 40.0%
! AGGAACAACGTTTTCGCTAT+TGG - Chr4:41607478-41607497 MsG0480020444.01.T01:intron 40.0%
! AGGTCCTATTGGCTATGATA+AGG - Chr4:41605778-41605797 MsG0480020444.01.T01:intron 40.0%
! ATAAAAATGGTGAGGAGCGT+TGG + Chr4:41604477-41604496 None:intergenic 40.0%
! ATCCCGATGGGTTTAAATTG+AGG - Chr4:41606163-41606182 MsG0480020444.01.T01:intron 40.0%
! CATGTCACTTAGTAAGCAAG+AGG + Chr4:41602404-41602423 None:intergenic 40.0%
! CCGTTGGTTATACCTTAGAT+AGG + Chr4:41602281-41602300 None:intergenic 40.0%
! CTTTGATCCACCTTTTGTCT+TGG - Chr4:41604414-41604433 MsG0480020444.01.T01:intron 40.0%
! GCATGATTTTGTGCATGATG+TGG + Chr4:41603617-41603636 None:intergenic 40.0%
! TGCCAGAGGATTTAAGTTCA+TGG + Chr4:41604029-41604048 None:intergenic 40.0%
!! GTTTTGGCATTCTTGAGCTT+AGG + Chr4:41603506-41603525 None:intergenic 40.0%
!! TTCTCAAGTTGAAACTGGGA+AGG + Chr4:41605497-41605516 None:intergenic 40.0%
!! TTGAGTTGAACCAAGAGCAA+GGG + Chr4:41603528-41603547 None:intergenic 40.0%
!! TTTGAGTTGAACCAAGAGCA+AGG + Chr4:41603529-41603548 None:intergenic 40.0%
!!! CGTTCAGTTTTGATTGTTGG+TGG - Chr4:41607092-41607111 MsG0480020444.01.T01:intron 40.0%
!!! GCACGTTCAGTTTTGATTGT+TGG - Chr4:41607089-41607108 MsG0480020444.01.T01:intron 40.0%
!!! TCAGTTTTGATTGTTGGTGG+AGG - Chr4:41607095-41607114 MsG0480020444.01.T01:intron 40.0%
!!! TGTTGCGTTTTCGGTGTTTT+CGG - Chr4:41603214-41603233 MsG0480020444.01.T01:CDS 40.0%
AATCCTCTGGCATTATCGTC+TGG - Chr4:41604037-41604056 MsG0480020444.01.T01:intron 45.0%
AATGCCAAAACCCTTGCTCT+TGG - Chr4:41603515-41603534 MsG0480020444.01.T01:intron 45.0%
ACACTTCGAAACGATCGCTA+CGG - Chr4:41603044-41603063 MsG0480020444.01.T01:intron 45.0%
ACCGTACAACTTTGTTCCCT+TGG + Chr4:41605255-41605274 None:intergenic 45.0%
ACTTAAGTAGAGGCCCCAAA+GGG - Chr4:41605592-41605611 MsG0480020444.01.T01:intron 45.0%
AGCTAAGTGTCATACGGGTA+TGG + Chr4:41602661-41602680 None:intergenic 45.0%
AGTCGGATCGTATAGACATC+CGG + Chr4:41602575-41602594 None:intergenic 45.0%
ATACCACTTGTCGAAAGAGC+AGG + Chr4:41604174-41604193 None:intergenic 45.0%
ATCCCCAATGGGTCTATCTA+TGG - Chr4:41603436-41603455 MsG0480020444.01.T01:intron 45.0%
ATGATGTCTGATCACACTCG+TGG - Chr4:41606360-41606379 MsG0480020444.01.T01:intron 45.0%
ATGGGCAAGTTTGAGAGCAA+TGG - Chr4:41606479-41606498 MsG0480020444.01.T01:intron 45.0%
ATGTCTCTTGTGTCCACACT+AGG + Chr4:41602479-41602498 None:intergenic 45.0%
ATTGCTCTCAAACTTGCCCA+TGG + Chr4:41606480-41606499 None:intergenic 45.0%
CAAGAGAACCTCAAGAGGTT+AGG + Chr4:41603664-41603683 None:intergenic 45.0%
CAAGCACAATAGTGGTCGTT+GGG + Chr4:41606916-41606935 None:intergenic 45.0%
CAGGCAGTGAAGCTATACAT+TGG + Chr4:41605660-41605679 None:intergenic 45.0%
CCACTCTTCTTTCTCTCTCT+AGG + Chr4:41603857-41603876 None:intergenic 45.0%
CCTAGAGAGAGAAAGAAGAG+TGG - Chr4:41603854-41603873 MsG0480020444.01.T01:intron 45.0%
CCTCTTGAACCAACCTAATG+TGG - Chr4:41602358-41602377 MsG0480020444.01.T01:CDS 45.0%
CGGCTTGAAACTTGGGTTTA+TGG + Chr4:41602955-41602974 None:intergenic 45.0%
CTAACCTCTTGAGGTTCTCT+TGG - Chr4:41603662-41603681 MsG0480020444.01.T01:intron 45.0%
CTCGTATCCTCCTTGACTTA+GGG - Chr4:41605803-41605822 MsG0480020444.01.T01:intron 45.0%
CTCTTGTGTCCACATTAGGT+TGG + Chr4:41602370-41602389 None:intergenic 45.0%
GAATACTTGAGAGTGAAGGG+AGG - Chr4:41607458-41607477 MsG0480020444.01.T01:intron 45.0%
GATGCATTACAGGGTCGAAT+TGG + Chr4:41603274-41603293 None:intergenic 45.0%
GCATTCTTGAGCTTAGGACT+TGG + Chr4:41603500-41603519 None:intergenic 45.0%
GGATAACTCTCACAGTTGTG+AGG - Chr4:41605310-41605329 MsG0480020444.01.T01:intron 45.0%
GGATTGATGAGCTAAAGCCA+TGG + Chr4:41603553-41603572 None:intergenic 45.0%
GGGAATCAACCGTCAGAATA+AGG + Chr4:41604395-41604414 None:intergenic 45.0%
GGTTAGGGTCTTGGTTATGT+TGG + Chr4:41603648-41603667 None:intergenic 45.0%
GGTTGTCTCAAGCATCATAG+TGG - Chr4:41605289-41605308 MsG0480020444.01.T01:intron 45.0%
GGTTTCCATTAGGTGAAACG+GGG + Chr4:41602340-41602359 None:intergenic 45.0%
GTGTCTCTTGTGTCCACATT+AGG + Chr4:41602374-41602393 None:intergenic 45.0%
TACTTAAGTAGAGGCCCCAA+AGG - Chr4:41605591-41605610 MsG0480020444.01.T01:intron 45.0%
TAGTGTGGACACAAGAGACA+TGG - Chr4:41602478-41602497 MsG0480020444.01.T01:CDS 45.0%
TCAGTTGTTGGAGTGCAGTA+GGG + Chr4:41605621-41605640 None:intergenic 45.0%
TGCTGAGGCTTAGAGAATAC+AGG - Chr4:41605218-41605237 MsG0480020444.01.T01:intron 45.0%
TGTATTCTCTAAGCCTCAGC+AGG + Chr4:41605219-41605238 None:intergenic 45.0%
TTACCAGACGATAATGCCAG+AGG + Chr4:41604043-41604062 None:intergenic 45.0%
TTCACCAAGAGAACCTCAAG+AGG + Chr4:41603669-41603688 None:intergenic 45.0%
TTCTTGAGCTTAGGACTTGG+AGG + Chr4:41603497-41603516 None:intergenic 45.0%
! ATGATTTGGATGGTCATGGG+AGG - Chr4:41607423-41607442 MsG0480020444.01.T01:intron 45.0%
! ATGCTGACTGCGTCAATGAA+TGG + Chr4:41606786-41606805 None:intergenic 45.0%
! GATCCACCTTTTGTCTTGGT+TGG - Chr4:41604418-41604437 MsG0480020444.01.T01:intron 45.0%
! GGTCGAATTGGACGAGTTTT+GGG + Chr4:41603262-41603281 None:intergenic 45.0%
! GTGGAGGGGTATGAAATGTT+GGG + Chr4:41604152-41604171 None:intergenic 45.0%
! TCTGAAGTCTTCACTGCTGA+TGG - Chr4:41606597-41606616 MsG0480020444.01.T01:intron 45.0%
! TGAACCAAGAGCAAGGGTTT+TGG + Chr4:41603522-41603541 None:intergenic 45.0%
!! CCACATTAGGTTGGTTCAAG+AGG + Chr4:41602361-41602380 None:intergenic 45.0%
!! GTCAGCATGTTGGTGTTGTT+TGG - Chr4:41606798-41606817 MsG0480020444.01.T01:intron 45.0%
!!! GACGAGTTTTGGGTCGAAAA+TGG + Chr4:41603252-41603271 None:intergenic 45.0%
!!! GTTTTCGGTGTTTTCGGCTA+CGG - Chr4:41603220-41603239 MsG0480020444.01.T01:CDS 45.0%
AAGGCGTGAAAGAGGAGAGA+AGG - Chr4:41603809-41603828 MsG0480020444.01.T01:intron 50.0%
ACCAAGACCCTAACCTCTTG+AGG - Chr4:41603653-41603672 MsG0480020444.01.T01:CDS 50.0%
ACCTCAAGAGGTTAGGGTCT+TGG + Chr4:41603657-41603676 None:intergenic 50.0%
ACTCTCACAGTTGTGAGGAG+TGG - Chr4:41605315-41605334 MsG0480020444.01.T01:intron 50.0%
ACTGTCCTTTCTGCGAAGGA+TGG + Chr4:41606510-41606529 None:intergenic 50.0%
AGCTTAGGACTTGGAGGCTT+TGG + Chr4:41603491-41603510 None:intergenic 50.0%
AGTGACATGCGGGTTCCTTA+CGG - Chr4:41602415-41602434 MsG0480020444.01.T01:CDS 50.0%
AGTTTCACCTAGCCATGCTG+TGG + Chr4:41607393-41607412 None:intergenic 50.0%
CAAGTCGACACTAGTGCGTT+AGG + Chr4:41605733-41605752 None:intergenic 50.0%
CATTGACGCAGTCAGCATGT+TGG - Chr4:41606788-41606807 MsG0480020444.01.T01:intron 50.0%
CCTAAGTCAAGGAGGATACG+AGG + Chr4:41605805-41605824 None:intergenic 50.0%
CCTCGTATCCTCCTTGACTT+AGG - Chr4:41605802-41605821 MsG0480020444.01.T01:intron 50.0%
CCTCTTGAACCAACCTAGTG+TGG - Chr4:41602463-41602482 MsG0480020444.01.T01:CDS 50.0%
CTCTTGTGTCCACACTAGGT+TGG + Chr4:41602475-41602494 None:intergenic 50.0%
GACACGTGGCACAAGACTAT+TGG - Chr4:41604839-41604858 MsG0480020444.01.T01:intron 50.0%
GATCACTGTCCTTTCTGCGA+AGG + Chr4:41606514-41606533 None:intergenic 50.0%
GCAAGCACAATAGTGGTCGT+TGG + Chr4:41606917-41606936 None:intergenic 50.0%
GCCGAATTATTCGGGTAGCA+AGG + Chr4:41602819-41602838 None:intergenic 50.0%
GCTAACCCCGTTTCACCTAA+TGG - Chr4:41602332-41602351 MsG0480020444.01.T01:CDS 50.0%
GCTTAGGACTTGGAGGCTTT+GGG + Chr4:41603490-41603509 None:intergenic 50.0%
GCTTCACTGCCTGACCATAA+AGG - Chr4:41605667-41605686 MsG0480020444.01.T01:CDS 50.0%
GGAAACCACTTTCCACAGCA+TGG - Chr4:41607378-41607397 MsG0480020444.01.T01:intron 50.0%
GGCAAGTTTGAGAGCAATGG+TGG - Chr4:41606482-41606501 MsG0480020444.01.T01:intron 50.0%
GTCAGTTGTTGGAGTGCAGT+AGG + Chr4:41605622-41605641 None:intergenic 50.0%
GTCGGATCGTATAGACATCC+GGG + Chr4:41602574-41602593 None:intergenic 50.0%
TATTCGGGTAGCAAGGAGCT+AGG + Chr4:41602812-41602831 None:intergenic 50.0%
TCGCACAGCAAGCACAATAG+TGG + Chr4:41606924-41606943 None:intergenic 50.0%
TCGGATCGTATAGACATCCG+GGG + Chr4:41602573-41602592 None:intergenic 50.0%
TGAGCTAGCAGCAGAGATTG+CGG - Chr4:41607130-41607149 MsG0480020444.01.T01:intron 50.0%
TTGTCGAAAGAGCAGGTGGA+GGG + Chr4:41604167-41604186 None:intergenic 50.0%
! AAGAGAGGAAGGCGTGAAAG+AGG - Chr4:41603801-41603820 MsG0480020444.01.T01:intron 50.0%
! ATTGTTGGTGGAGGTCCAAC+TGG - Chr4:41607104-41607123 MsG0480020444.01.T01:intron 50.0%
! CGCTGCGATTGTTGCGTTTT+CGG - Chr4:41603205-41603224 MsG0480020444.01.T01:CDS 50.0%
! GGGTCGAATTGGACGAGTTT+TGG + Chr4:41603263-41603282 None:intergenic 50.0%
! GGTGGAGGGGTATGAAATGT+TGG + Chr4:41604153-41604172 None:intergenic 50.0%
! GTACGGTGCATGAGTTGAGA+AGG - Chr4:41605268-41605287 MsG0480020444.01.T01:intron 50.0%
!! CCACACTAGGTTGGTTCAAG+AGG + Chr4:41602466-41602485 None:intergenic 50.0%
AAGAGGTTGTGAGCCTGCTG+AGG - Chr4:41605203-41605222 MsG0480020444.01.T01:intron 55.0%
AGTGACGTGCGGGATCCTTA+CGG - Chr4:41602310-41602329 MsG0480020444.01.T01:CDS 55.0%
AGTGCAGTAGGGAGACCCTT+TGG + Chr4:41605610-41605629 None:intergenic 55.0%
CCACCTGCTCTTTCGACAAG+TGG - Chr4:41604168-41604187 MsG0480020444.01.T01:intron 55.0%
CCACTTGTCGAAAGAGCAGG+TGG + Chr4:41604171-41604190 None:intergenic 55.0%
CCACTTTCCACAGCATGGCT+AGG - Chr4:41607383-41607402 MsG0480020444.01.T01:intron 55.0%
CCTAGCCATGCTGTGGAAAG+TGG + Chr4:41607386-41607405 None:intergenic 55.0%
CTTGTCGAAAGAGCAGGTGG+AGG + Chr4:41604168-41604187 None:intergenic 55.0%
GCGTGAAAGAGGAGAGAAGG+AGG - Chr4:41603812-41603831 MsG0480020444.01.T01:intron 55.0%
GCTGCTAGCTCAACACCAGT+TGG + Chr4:41607122-41607141 None:intergenic 55.0%
GGTAGCAAGGAGCTAGGCAT+GGG + Chr4:41602806-41602825 None:intergenic 55.0%
GTGCAGTAGGGAGACCCTTT+GGG + Chr4:41605609-41605628 None:intergenic 55.0%
TGCAGTAGGGAGACCCTTTG+GGG + Chr4:41605608-41605627 None:intergenic 55.0%
TGGAGCCATCCTTCGCAGAA+AGG - Chr4:41606502-41606521 MsG0480020444.01.T01:intron 55.0%
TGTCGAAAGAGCAGGTGGAG+GGG + Chr4:41604166-41604185 None:intergenic 55.0%
TGTTCTGCGTTCGGGTGCTT+GGG + Chr4:41603087-41603106 None:intergenic 55.0%
TTGTTCTGCGTTCGGGTGCT+TGG + Chr4:41603088-41603107 None:intergenic 55.0%
!! GTGAAACGGGGTTAGCCGTA+AGG + Chr4:41602328-41602347 None:intergenic 55.0%
AACGCGGAGGTTGTCCTGTC+TGG - Chr4:41603106-41603125 MsG0480020444.01.T01:CDS 60.0%
ACGCGGAGGTTGTCCTGTCT+GGG - Chr4:41603107-41603126 MsG0480020444.01.T01:CDS 60.0%
CACCCGAACGCAGAACAACG+CGG - Chr4:41603090-41603109 MsG0480020444.01.T01:CDS 60.0%
CCTCCGCGTTGTTCTGCGTT+CGG + Chr4:41603096-41603115 None:intergenic 60.0%
CTCCGCGTTGTTCTGCGTTC+GGG + Chr4:41603095-41603114 None:intergenic 60.0%
GGGTAGCAAGGAGCTAGGCA+TGG + Chr4:41602807-41602826 None:intergenic 60.0%
GTTCTGCGTTCGGGTGCTTG+GGG + Chr4:41603086-41603105 None:intergenic 60.0%
TTCTGCGTTCGGGTGCTTGG+GGG + Chr4:41603085-41603104 None:intergenic 60.0%
ACACACAGGGAGCCAGCGCT+AGG + Chr4:41603156-41603175 None:intergenic 65.0%
AGGATCCCGCACGTCACTGC+AGG + Chr4:41602308-41602327 None:intergenic 65.0%
CCGAACGCAGAACAACGCGG+AGG - Chr4:41603093-41603112 MsG0480020444.01.T01:CDS 65.0%
CGCGGAGGTTGTCCTGTCTG+GGG - Chr4:41603108-41603127 MsG0480020444.01.T01:CDS 65.0%
GCACTCCTGCAGTGACGTGC+GGG - Chr4:41602300-41602319 MsG0480020444.01.T01:CDS 65.0%
GCAGCGCTGCGCCTGTACAA+GGG + Chr4:41603191-41603210 None:intergenic 65.0%
GGCACTCCTGCAGTGACGTG+CGG - Chr4:41602299-41602318 MsG0480020444.01.T01:CDS 65.0%
GTGCTTGGGGGCAGTCGTGT+GGG + Chr4:41603073-41603092 None:intergenic 65.0%
TGCTTGGGGGCAGTCGTGTG+GGG + Chr4:41603072-41603091 None:intergenic 65.0%
!! AGCGCTGGCTCCCTGTGTGT+GGG - Chr4:41603156-41603175 MsG0480020444.01.T01:CDS 65.0%
!! CGTCACTGCAGGAGTGCCGT+TGG + Chr4:41602297-41602316 None:intergenic 65.0%
!! TAGCGCTGGCTCCCTGTGTG+TGG - Chr4:41603155-41603174 MsG0480020444.01.T01:CDS 65.0%
!! TGCGCCTGTACAAGGGCGCT+AGG + Chr4:41603184-41603203 None:intergenic 65.0%
CGCAGCGCTGCGCCTGTACA+AGG + Chr4:41603192-41603211 None:intergenic 70.0%
GCGCTAGGCGCCCACACACA+GGG + Chr4:41603169-41603188 None:intergenic 70.0%
GCTTGGGGGCAGTCGTGTGG+GGG + Chr4:41603071-41603090 None:intergenic 70.0%
GGCGCCTAGCGCCCTTGTAC+AGG - Chr4:41603177-41603196 MsG0480020444.01.T01:CDS 70.0%
GGTGCTTGGGGGCAGTCGTG+TGG + Chr4:41603074-41603093 None:intergenic 70.0%
! GTTGTCCTGTCTGGGGCGCC+TGG - Chr4:41603115-41603134 MsG0480020444.01.T01:CDS 70.0%
CAGCGCTAGGCGCCCACTCC+TGG + Chr4:41603143-41603162 None:intergenic 75.0%
CAGGAGTGGGCGCCTAGCGC+TGG - Chr4:41603141-41603160 MsG0480020444.01.T01:CDS 75.0%
GGCGCTAGGCGCCCACACAC+AGG + Chr4:41603170-41603189 None:intergenic 75.0%
! AGGCGCCCACTCCTGGCGCC+AGG + Chr4:41603136-41603155 None:intergenic 80.0%
! GGGCGCCTGGCGCCAGGAGT+GGG - Chr4:41603128-41603147 MsG0480020444.01.T01:CDS 80.0%
! TGGCGCCAGGCGCCCCAGAC+AGG + Chr4:41603123-41603142 None:intergenic 80.0%
!! TGTCTGGGGCGCCTGGCGCC+AGG - Chr4:41603122-41603141 MsG0480020444.01.T01:CDS 80.0%
!! GGGGCGCCTGGCGCCAGGAG+TGG - Chr4:41603127-41603146 MsG0480020444.01.T01:CDS 85.0%
Chromosome Type Strat End Strand Name
Chr4 gene 41602271 41607523 41602271 ID=MsG0480020444.01;Name=MsG0480020444.01
Chr4 mRNA 41602271 41607523 41602271 ID=MsG0480020444.01.T01;Parent=MsG0480020444.01;Name=MsG0480020444.01.T01;_AED=0.39;_eAED=0.39;_QI=0|0|0|0.33|1|1|6|0|379
Chr4 exon 41607507 41607523 41607507 ID=MsG0480020444.01.T01:exon:4407;Parent=MsG0480020444.01.T01
Chr4 exon 41605605 41605714 41605605 ID=MsG0480020444.01.T01:exon:4406;Parent=MsG0480020444.01.T01
Chr4 exon 41603571 41603673 41603571 ID=MsG0480020444.01.T01:exon:4405;Parent=MsG0480020444.01.T01
Chr4 exon 41603081 41603336 41603081 ID=MsG0480020444.01.T01:exon:4404;Parent=MsG0480020444.01.T01
Chr4 exon 41602849 41602991 41602849 ID=MsG0480020444.01.T01:exon:4403;Parent=MsG0480020444.01.T01
Chr4 exon 41602271 41602781 41602271 ID=MsG0480020444.01.T01:exon:4402;Parent=MsG0480020444.01.T01
Chr4 CDS 41607507 41607523 41607507 ID=MsG0480020444.01.T01:cds;Parent=MsG0480020444.01.T01
Chr4 CDS 41605605 41605714 41605605 ID=MsG0480020444.01.T01:cds;Parent=MsG0480020444.01.T01
Chr4 CDS 41603571 41603673 41603571 ID=MsG0480020444.01.T01:cds;Parent=MsG0480020444.01.T01
Chr4 CDS 41603081 41603336 41603081 ID=MsG0480020444.01.T01:cds;Parent=MsG0480020444.01.T01
Chr4 CDS 41602849 41602991 41602849 ID=MsG0480020444.01.T01:cds;Parent=MsG0480020444.01.T01
Chr4 CDS 41602271 41602781 41602271 ID=MsG0480020444.01.T01:cds;Parent=MsG0480020444.01.T01
Gene Sequence

>MsG0480020444.01.T01

ATGGAAACCTATCTAAGGCGGGATGTTACAAAATCTTTATTCAAGTTTTTAAATCTCTCGAGTACTTTTGGAGATATCTCTGTGCACCCAACATTTCATACCCCTCCACCTGCTCTTTCGACAAGTGAAAATCGTGTTATCAATTATTGTCGAAGTCAGTTTCATTATGATCCCGATGGGTTTAAATTGAGGTTGTTGTCTGTTACTATGCTACGAACTTTTATACTGTGGAAGGAGTATTTTGAGATTCCATGGGCAAGTTTGAGAGCAATGGTGGAGCCATCCTTCGCAGAAAGGACAGTGATCAACCATAGAGAATATTTCACAAAAGGTGACCTTGTTATATCAAGTGCCATCAACATAACTGAATCTGAAGTCTTCACTGCTGATGGCCGTCAGATCACCTATGATTATCTTGTTATCGCAACTGGTCACACAGAATCTATCCAAAAACTAGGACTGAAAGACTTGACCAATACAAAGGAGCATGTTGGTGTTGTTTGGTTGCGATTGAACGGTTTAGTTTTCAATGCAAGTGTTGAATTTTTATTTAAATCTAAAATACTGAACTTGAAATCTAGATCGTGCAATCTCGACCCAACGACCACTATTGTGCTTGCTGTGCGAATATTTTCAATGTATCGATTTCATATGAGTGATAAGGACTCTTTTCTTGCAATGACAGAAAATACGAAGATAAAATCTGCACGTTCAGTTTTGATTGTTGGTGGAGGTCCAACTGGTGTTGAGCTAGCAGCAGAGATTGCGGTTGATTTTCCTGATAAAAAAGTGACTATAGTGCATAAAGGATCAAGATTGCTAGAATATATTGGACCAAAAGCTTCAAGAAAGACATTAAAATGGCTTCAATCAAGGAAAGTTGATGTGAAATTTGAACAATCAGTTGACTTAGACTCCTTCACAAATGAAAATAGGACTTATCAAACTTCGGTTGGAGAGAGTGTAGAAGCAGATACACATTTTCTATGTATAGGGAAACCACTTTCCACAGCATGGCTAGGTGAAACTTTTTTGAAAGATGATTTGGATGGTCATGGGAGGATCCAAGTTGATGAATACTTGAGAGTGAAGGGAGGAACAACGTTTTCGCTATTGGAGACATTACGGATATTCAAGTAA

Protein sequence

>MsG0480020444.01.T01

METYLRRDVTKSLFKFLNLSSTFGDISVHPTFHTPPPALSTSENRVINYCRSQFHYDPDGFKLRLLSVTMLRTFILWKEYFEIPWASLRAMVEPSFAERTVINHREYFTKGDLVISSAINITESEVFTADGRQITYDYLVIATGHTESIQKLGLKDLTNTKEHVGVVWLRLNGLVFNASVEFLFKSKILNLKSRSCNLDPTTTIVLAVRIFSMYRFHMSDKDSFLAMTENTKIKSARSVLIVGGGPTGVELAAEIAVDFPDKKVTIVHKGSRLLEYIGPKASRKTLKWLQSRKVDVKFEQSVDLDSFTNENRTYQTSVGESVEADTHFLCIGKPLSTAWLGETFLKDDLDGHGRIQVDEYLRVKGGTTFSLLETLRIFK*