Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480018904.01.T01 | XP_013454931.1 | 96.818 | 220 | 7 | 0 | 1 | 220 | 1 | 220 | 7.55E-152 | 430 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480018904.01.T01 | P32110 | 66.071 | 224 | 70 | 2 | 3 | 220 | 2 | 225 | 3.68E-102 | 298 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480018904.01.T01 | A0A072UGV0 | 96.818 | 220 | 7 | 0 | 1 | 220 | 1 | 220 | 3.60e-152 | 430 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048177.01 | MsG0480018904.01 | 0.800955 | 1.130237e-48 | 5.332438e-46 |
| MsG0180000019.01 | MsG0480018904.01 | 0.852964 | 3.267566e-61 | 6.947787e-58 |
| MsG0180000222.01 | MsG0480018904.01 | 0.826803 | 2.219323e-54 | 2.103104e-51 |
| MsG0180000673.01 | MsG0480018904.01 | 0.821040 | 4.988591e-53 | 4.014172e-50 |
| MsG0180000887.01 | MsG0480018904.01 | 0.801609 | 8.303958e-49 | 3.982720e-46 |
| MsG0180001043.01 | MsG0480018904.01 | 0.832547 | 8.883569e-56 | 9.961789e-53 |
| MsG0180001050.01 | MsG0480018904.01 | 0.840913 | 6.528211e-58 | 9.437334e-55 |
| MsG0180001053.01 | MsG0480018904.01 | 0.809192 | 2.136912e-50 | 1.246463e-47 |
| MsG0180001921.01 | MsG0480018904.01 | 0.803117 | 4.062524e-49 | 2.024689e-46 |
| MsG0180002912.01 | MsG0480018904.01 | 0.821655 | 3.598134e-53 | 2.945109e-50 |
| MsG0180003088.01 | MsG0480018904.01 | 0.803892 | 2.806795e-49 | 1.427107e-46 |
| MsG0180003241.01 | MsG0480018904.01 | 0.841065 | 5.955707e-58 | 8.648993e-55 |
| MsG0180004110.01 | MsG0480018904.01 | 0.804017 | 2.643120e-49 | 1.348177e-46 |
| MsG0180004258.01 | MsG0480018904.01 | 0.802719 | 4.908719e-49 | 2.421889e-46 |
| MsG0180004762.01 | MsG0480018904.01 | 0.821738 | 3.441201e-53 | 2.823307e-50 |
| MsG0180005125.01 | MsG0480018904.01 | 0.836152 | 1.106416e-56 | 1.382420e-53 |
| MsG0180005996.01 | MsG0480018904.01 | 0.857230 | 1.880737e-62 | 4.609659e-59 |
| MsG0180005997.01 | MsG0480018904.01 | 0.802384 | 5.756444e-49 | 2.816075e-46 |
| MsG0180006047.01 | MsG0480018904.01 | 0.813076 | 3.074153e-51 | 1.987765e-48 |
| MsG0180006187.01 | MsG0480018904.01 | 0.824650 | 7.194182e-54 | 6.412116e-51 |
| MsG0280011053.01 | MsG0480018904.01 | 0.867924 | 9.561632e-66 | 3.395810e-62 |
| MsG0280011152.01 | MsG0480018904.01 | 0.847952 | 8.349686e-60 | 1.508575e-56 |
| MsG0280011288.01 | MsG0480018904.01 | 0.819026 | 1.441461e-52 | 1.096746e-49 |
| MsG0280011473.01 | MsG0480018904.01 | 0.828815 | 7.287536e-55 | 7.323089e-52 |
| MsG0380011754.01 | MsG0480018904.01 | 0.803976 | 2.695707e-49 | 1.373574e-46 |
| MsG0380013047.01 | MsG0480018904.01 | 0.809553 | 1.787369e-50 | 1.052651e-47 |
| MsG0380014680.01 | MsG0480018904.01 | 0.829186 | 5.927314e-55 | 6.022157e-52 |
| MsG0380014920.01 | MsG0480018904.01 | 0.845495 | 3.920134e-59 | 6.544555e-56 |
| MsG0480018500.01 | MsG0480018904.01 | 0.812670 | 3.772211e-51 | 2.413153e-48 |
| MsG0480018904.01 | MsG0480020219.01 | 0.832948 | 7.064093e-56 | 8.016621e-53 |
| MsG0480018904.01 | MsG0480020444.01 | 0.828605 | 8.194509e-55 | 8.184787e-52 |
| MsG0480018904.01 | MsG0480020445.01 | 0.825585 | 4.325790e-54 | 3.959413e-51 |
| MsG0480018904.01 | MsG0480021135.01 | 0.807503 | 4.897477e-50 | 2.732484e-47 |
| MsG0480018904.01 | MsG0480022125.01 | 0.823304 | 1.488615e-53 | 1.276867e-50 |
| MsG0480018904.01 | MsG0480022274.01 | 0.867241 | 1.582076e-65 | 5.485035e-62 |
| MsG0480018904.01 | MsG0480022480.01 | 0.800137 | 1.659529e-48 | 7.668461e-46 |
| MsG0480018904.01 | MsG0480022507.01 | 0.847730 | 9.612631e-60 | 1.724602e-56 |
| MsG0480018904.01 | MsG0480022508.01 | 0.831506 | 1.605799e-55 | 1.746147e-52 |
| MsG0480018904.01 | MsG0480022760.01 | 0.809447 | 1.883342e-50 | 1.106031e-47 |
| MsG0480018904.01 | MsG0480023280.01 | 0.847354 | 1.219629e-59 | 2.161850e-56 |
| MsG0480018904.01 | MsG0480023318.01 | 0.825088 | 5.671671e-54 | 5.118761e-51 |
| MsG0480018904.01 | MsG0480023417.01 | 0.858932 | 5.863977e-63 | 1.522021e-59 |
| MsG0480018904.01 | MsG0480023517.01 | 0.844387 | 7.800679e-59 | 1.257255e-55 |
| MsG0480018904.01 | MsG0480023947.01 | 0.913406 | 6.387445e-84 | 1.508183e-79 |
| MsG0480018904.01 | MsG0580024204.01 | 0.855004 | 8.438535e-62 | 1.920257e-58 |
| MsG0480018904.01 | MsG0580024407.01 | 0.809728 | 1.639352e-50 | 9.699971e-48 |
| MsG0480018904.01 | MsG0580024476.01 | 0.811189 | 7.929252e-51 | 4.876052e-48 |
| MsG0480018904.01 | MsG0580024575.01 | 0.825170 | 5.422951e-54 | 4.905737e-51 |
| MsG0480018904.01 | MsG0580024910.01 | 0.801888 | 7.278369e-49 | 3.515925e-46 |
| MsG0480018904.01 | MsG0580025278.01 | 0.814666 | 1.371604e-51 | 9.259905e-49 |
| MsG0480018904.01 | MsG0580027034.01 | 0.803135 | 4.028546e-49 | 2.008672e-46 |
| MsG0480018904.01 | MsG0580027073.01 | 0.848900 | 4.563520e-60 | 8.501863e-57 |
| MsG0480018904.01 | MsG0580027129.01 | 0.812418 | 4.282612e-51 | 2.721651e-48 |
| MsG0480018904.01 | MsG0580027227.01 | 0.833012 | 6.810269e-56 | 7.743824e-53 |
| MsG0480018904.01 | MsG0580027345.01 | 0.820474 | 6.730366e-53 | 5.330680e-50 |
| MsG0480018904.01 | MsG0580028051.01 | 0.802760 | 4.813681e-49 | 2.377501e-46 |
| MsG0480018904.01 | MsG0580028185.01 | 0.810610 | 1.058354e-50 | 6.408873e-48 |
| MsG0480018904.01 | MsG0580028355.01 | 0.823306 | 1.486965e-53 | 1.275530e-50 |
| MsG0480018904.01 | MsG0580028416.01 | 0.846047 | 2.775451e-59 | 4.717248e-56 |
| MsG0480018904.01 | MsG0580029583.01 | 0.806438 | 8.224193e-50 | 4.463905e-47 |
| MsG0480018904.01 | MsG0580029758.01 | 0.852468 | 4.527421e-61 | 9.468957e-58 |
| MsG0480018904.01 | MsG0580029906.01 | 0.853170 | 2.852295e-61 | 6.106938e-58 |
| MsG0480018904.01 | MsG0580029930.01 | 0.829602 | 4.696828e-55 | 4.830200e-52 |
| MsG0480018904.01 | MsG0580030160.01 | 0.811931 | 5.469755e-51 | 3.430142e-48 |
| MsG0480018904.01 | MsG0680034450.01 | 0.825652 | 4.170671e-54 | 3.824805e-51 |
| MsG0480018904.01 | MsG0680034672.01 | 0.808802 | 2.590006e-50 | 1.494980e-47 |
| MsG0480018904.01 | MsG0780036210.01 | 0.813056 | 3.105330e-51 | 2.006874e-48 |
| MsG0480018904.01 | MsG0780036550.01 | 0.803046 | 4.202582e-49 | 2.090667e-46 |
| MsG0480018904.01 | MsG0780037258.01 | 0.846477 | 2.119052e-59 | 3.652426e-56 |
| MsG0480018904.01 | MsG0780038444.01 | 0.844107 | 9.279151e-59 | 1.482655e-55 |
| MsG0480018904.01 | MsG0780038515.01 | 0.827091 | 1.894882e-54 | 1.810872e-51 |
| MsG0480018904.01 | MsG0780038930.01 | 0.815129 | 1.083037e-51 | 7.403604e-49 |
| MsG0480018904.01 | MsG0780039472.01 | 0.806429 | 8.260294e-50 | 4.482502e-47 |
| MsG0480018904.01 | MsG0780040679.01 | 0.803180 | 3.942457e-49 | 1.968087e-46 |
| MsG0480018904.01 | MsG0780041196.01 | 0.805055 | 1.605875e-49 | 8.412736e-47 |
| MsG0480018904.01 | MsG0780041357.01 | 0.802978 | 4.341192e-49 | 2.155872e-46 |
| MsG0480018904.01 | MsG0880041985.01 | 0.867828 | 1.026031e-65 | 3.631729e-62 |
| MsG0480018904.01 | MsG0880042319.01 | 0.807339 | 5.305205e-50 | 2.947342e-47 |
| MsG0480018904.01 | MsG0880042320.01 | 0.875830 | 2.261205e-68 | 1.071606e-64 |
| MsG0480018904.01 | MsG0880042368.01 | 0.868927 | 4.535949e-66 | 1.670402e-62 |
| MsG0480018904.01 | MsG0880042843.01 | 0.876186 | 1.705770e-68 | 8.192074e-65 |
| MsG0480018904.01 | MsG0880042957.01 | 0.811710 | 6.109830e-51 | 3.809154e-48 |
| MsG0480018904.01 | MsG0880042976.01 | 0.846604 | 1.956931e-59 | 3.386549e-56 |
| MsG0480018904.01 | MsG0880043246.01 | 0.832720 | 8.044672e-56 | 9.068131e-53 |
| MsG0480018904.01 | MsG0880043262.01 | 0.800085 | 1.700140e-48 | 7.845860e-46 |
| MsG0480018904.01 | MsG0880043285.01 | 0.802680 | 5.000657e-49 | 2.464701e-46 |
| MsG0480018904.01 | MsG0880044669.01 | 0.836616 | 8.428636e-57 | 1.067788e-53 |
| MsG0480018904.01 | MsG0880044837.01 | 0.814771 | 1.299915e-51 | 8.800576e-49 |
| MsG0480018904.01 | MsG0880045106.01 | 0.808905 | 2.461008e-50 | 1.424439e-47 |
| MsG0480018904.01 | MsG0880045277.01 | 0.810743 | 9.902988e-51 | 6.018386e-48 |
| MsG0480018904.01 | MsG0880045441.01 | 0.851123 | 1.089369e-60 | 2.182525e-57 |
| MsG0480018904.01 | MsG0880046586.01 | 0.817078 | 3.973016e-52 | 2.864956e-49 |
| MsG0480018904.01 | MsG0880046642.01 | 0.832072 | 1.164247e-55 | 1.287342e-52 |
| MsG0480018904.01 | MsG0880046731.01 | 0.821968 | 3.045240e-53 | 2.514772e-50 |
| MsG0480018904.01 | MsG0880046888.01 | 0.817480 | 3.225817e-52 | 2.352001e-49 |
| MsG0480018904.01 | MsG0880046975.01 | 0.814069 | 1.858912e-51 | 1.234908e-48 |
| MsG0480018904.01 | MsG0880047081.01 | 0.881455 | 2.365950e-70 | 1.387206e-66 |
| MsG0380015181.01 | MsG0480018904.01 | 0.810115 | 1.353467e-50 | 8.089830e-48 |
| MsG0380016644.01 | MsG0480018904.01 | 0.806550 | 7.790992e-50 | 4.240912e-47 |
| MsG0380017020.01 | MsG0480018904.01 | 0.835956 | 1.240732e-56 | 1.540925e-53 |
| MsG0380017158.01 | MsG0480018904.01 | 0.854066 | 1.576702e-61 | 3.479075e-58 |
| MsG0380017226.01 | MsG0480018904.01 | 0.810685 | 1.019160e-50 | 6.184157e-48 |
| MsG0380017286.01 | MsG0480018904.01 | 0.846934 | 1.589677e-59 | 2.780095e-56 |
| MsG0280006581.01 | MsG0480018904.01 | 0.807356 | 5.261301e-50 | 2.924177e-47 |
| MsG0280006704.01 | MsG0480018904.01 | 0.824861 | 6.416127e-54 | 5.753195e-51 |
| MsG0280007258.01 | MsG0480018904.01 | 0.810392 | 1.179263e-50 | 7.099487e-48 |
| MsG0280007272.01 | MsG0480018904.01 | 0.862200 | 5.996062e-64 | 1.741624e-60 |
| MsG0280007369.01 | MsG0480018904.01 | 0.883080 | 6.068811e-71 | 3.792114e-67 |
| MsG0280007391.01 | MsG0480018904.01 | 0.855370 | 6.602074e-62 | 1.521005e-58 |
| MsG0280007751.01 | MsG0480018904.01 | 0.828631 | 8.076757e-55 | 8.073022e-52 |
| MsG0280008220.01 | MsG0480018904.01 | 0.813978 | 1.947021e-51 | 1.290174e-48 |
| MsG0280009838.01 | MsG0480018904.01 | 0.824516 | 7.739560e-54 | 6.870759e-51 |
| MsG0280009858.01 | MsG0480018904.01 | 0.820746 | 5.828493e-53 | 4.651226e-50 |
| MsG0280010354.01 | MsG0480018904.01 | 0.803152 | 3.995990e-49 | 1.993384e-46 |
PPI
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480018904.01.T01 | MTR_4g019780 | 96.818 | 220 | 7 | 0 | 1 | 220 | 1 | 220 | 9.14e-156 | 430 |
| MsG0480018904.01.T01 | MTR_7g065720 | 62.844 | 218 | 77 | 3 | 1 | 216 | 1 | 216 | 6.95e-97 | 281 |
| MsG0480018904.01.T01 | MTR_7g065660 | 61.751 | 217 | 80 | 3 | 1 | 216 | 1 | 215 | 8.47e-95 | 276 |
| MsG0480018904.01.T01 | MTR_7g065590 | 60.563 | 213 | 82 | 2 | 5 | 216 | 4 | 215 | 3.20e-93 | 272 |
| MsG0480018904.01.T01 | MTR_4g019790 | 59.624 | 213 | 84 | 2 | 5 | 216 | 4 | 215 | 3.31e-93 | 272 |
| MsG0480018904.01.T01 | MTR_7g065740 | 59.633 | 218 | 84 | 3 | 1 | 216 | 1 | 216 | 1.34e-92 | 271 |
| MsG0480018904.01.T01 | MTR_7g065290 | 59.535 | 215 | 85 | 2 | 3 | 216 | 2 | 215 | 3.83e-92 | 270 |
| MsG0480018904.01.T01 | MTR_7g065600 | 59.813 | 214 | 84 | 2 | 4 | 216 | 3 | 215 | 1.69e-91 | 268 |
| MsG0480018904.01.T01 | MTR_7g065630 | 59.361 | 219 | 83 | 3 | 1 | 218 | 18 | 231 | 2.49e-90 | 265 |
| MsG0480018904.01.T01 | MTR_7g065750 | 58.796 | 216 | 86 | 2 | 3 | 216 | 2 | 216 | 7.06e-90 | 264 |
| MsG0480018904.01.T01 | MTR_7g065270 | 56.744 | 215 | 91 | 2 | 3 | 216 | 2 | 215 | 1.99e-87 | 258 |
| MsG0480018904.01.T01 | MTR_7g065265 | 57.674 | 215 | 89 | 2 | 3 | 216 | 2 | 215 | 4.37e-87 | 257 |
| MsG0480018904.01.T01 | MTR_7g065230 | 58.140 | 215 | 83 | 3 | 3 | 216 | 2 | 210 | 4.11e-85 | 251 |
| MsG0480018904.01.T01 | MTR_7g065260 | 56.881 | 218 | 92 | 2 | 4 | 220 | 10 | 226 | 2.34e-80 | 240 |
| MsG0480018904.01.T01 | MTR_7g065640 | 55.300 | 217 | 76 | 3 | 1 | 216 | 1 | 197 | 2.57e-80 | 239 |
| MsG0480018904.01.T01 | MTR_7g065710 | 53.846 | 208 | 90 | 3 | 9 | 215 | 5 | 207 | 2.54e-76 | 229 |
| MsG0480018904.01.T01 | MTR_7g065680 | 55.963 | 218 | 90 | 3 | 3 | 219 | 2 | 214 | 4.39e-74 | 224 |
| MsG0480018904.01.T01 | MTR_7g065700 | 56.075 | 214 | 88 | 3 | 3 | 215 | 2 | 210 | 3.05e-73 | 222 |
| MsG0480018904.01.T01 | MTR_6g080440 | 49.758 | 207 | 104 | 0 | 8 | 214 | 3 | 209 | 3.26e-72 | 219 |
| MsG0480018904.01.T01 | MTR_1g090150 | 46.226 | 212 | 111 | 2 | 6 | 215 | 1 | 211 | 1.39e-68 | 210 |
| MsG0480018904.01.T01 | MTR_5g040430 | 48.372 | 215 | 105 | 2 | 8 | 216 | 7 | 221 | 1.71e-66 | 204 |
| MsG0480018904.01.T01 | MTR_3g099757 | 48.815 | 211 | 108 | 0 | 6 | 216 | 3 | 213 | 1.28e-65 | 202 |
| MsG0480018904.01.T01 | MTR_8g087425 | 48.113 | 212 | 110 | 0 | 5 | 216 | 2 | 213 | 4.29e-65 | 201 |
| MsG0480018904.01.T01 | MTR_8g087410 | 48.804 | 209 | 107 | 0 | 5 | 213 | 3 | 211 | 1.92e-63 | 197 |
| MsG0480018904.01.T01 | MTR_1g115195 | 46.860 | 207 | 107 | 2 | 8 | 211 | 3 | 209 | 8.93e-61 | 190 |
| MsG0480018904.01.T01 | MTR_4g059730 | 44.700 | 217 | 116 | 3 | 7 | 220 | 3 | 218 | 6.13e-58 | 182 |
| MsG0480018904.01.T01 | MTR_1g090070 | 43.396 | 212 | 115 | 3 | 8 | 215 | 9 | 219 | 3.16e-56 | 178 |
| MsG0480018904.01.T01 | MTR_1g090060 | 43.602 | 211 | 113 | 3 | 8 | 214 | 3 | 211 | 8.57e-56 | 177 |
| MsG0480018904.01.T01 | MTR_1g090100 | 44.444 | 216 | 114 | 3 | 9 | 220 | 3 | 216 | 3.59e-54 | 173 |
| MsG0480018904.01.T01 | MTR_1g090090 | 43.333 | 210 | 113 | 3 | 8 | 213 | 3 | 210 | 1.39e-53 | 172 |
| MsG0480018904.01.T01 | MTR_2g070130 | 40.488 | 205 | 119 | 2 | 7 | 210 | 3 | 205 | 2.38e-49 | 160 |
| MsG0480018904.01.T01 | MTR_5g037380 | 40.088 | 227 | 125 | 4 | 1 | 219 | 1 | 224 | 3.39e-48 | 158 |
| MsG0480018904.01.T01 | MTR_2g070150 | 41.951 | 205 | 114 | 3 | 7 | 209 | 3 | 204 | 5.24e-48 | 157 |
| MsG0480018904.01.T01 | MTR_8g061950 | 39.545 | 220 | 123 | 5 | 6 | 216 | 3 | 221 | 1.29e-46 | 154 |
| MsG0480018904.01.T01 | MTR_2g070120 | 37.321 | 209 | 128 | 2 | 7 | 214 | 3 | 209 | 2.44e-45 | 150 |
| MsG0480018904.01.T01 | MTR_2g070180 | 39.024 | 205 | 122 | 2 | 7 | 210 | 3 | 205 | 2.71e-45 | 150 |
| MsG0480018904.01.T01 | MTR_2g070140 | 40.722 | 194 | 110 | 3 | 22 | 213 | 2 | 192 | 3.25e-44 | 147 |
| MsG0480018904.01.T01 | MTR_2g070200 | 40.367 | 218 | 123 | 6 | 7 | 220 | 3 | 217 | 4.99e-44 | 147 |
| MsG0480018904.01.T01 | MTR_2g070210 | 39.048 | 210 | 123 | 3 | 7 | 213 | 3 | 210 | 1.55e-43 | 145 |
| MsG0480018904.01.T01 | MTR_3g467430 | 40.465 | 215 | 115 | 7 | 5 | 213 | 6 | 213 | 1.86e-43 | 145 |
| MsG0480018904.01.T01 | MTR_2g070070 | 37.981 | 208 | 124 | 4 | 8 | 213 | 4 | 208 | 4.81e-43 | 144 |
| MsG0480018904.01.T01 | MTR_3g467420 | 38.942 | 208 | 120 | 5 | 9 | 213 | 10 | 213 | 9.49e-43 | 144 |
| MsG0480018904.01.T01 | MTR_4g124130 | 38.532 | 218 | 128 | 5 | 6 | 220 | 2 | 216 | 1.20e-42 | 143 |
| MsG0480018904.01.T01 | MTR_8g056940 | 37.321 | 209 | 126 | 4 | 7 | 213 | 3 | 208 | 1.85e-41 | 140 |
| MsG0480018904.01.T01 | MTR_2g070060 | 37.500 | 208 | 125 | 4 | 8 | 213 | 4 | 208 | 2.29e-41 | 140 |
| MsG0480018904.01.T01 | MTR_2g070110 | 37.198 | 207 | 126 | 3 | 8 | 213 | 4 | 207 | 5.42e-40 | 137 |
| MsG0480018904.01.T01 | MTR_5g076900 | 36.538 | 208 | 129 | 2 | 7 | 213 | 5 | 210 | 3.87e-39 | 134 |
| MsG0480018904.01.T01 | MTR_0186s0030 | 44.286 | 140 | 75 | 3 | 7 | 144 | 3 | 141 | 1.55e-33 | 117 |
| MsG0480018904.01.T01 | MTR_2g072120 | 47.297 | 74 | 37 | 2 | 52 | 124 | 2 | 74 | 2.27e-18 | 76.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480018904.01.T01 | AT3G09270 | 58.140 | 215 | 87 | 3 | 5 | 216 | 2 | 216 | 3.22e-90 | 265 |
| MsG0480018904.01.T01 | AT2G29420 | 48.387 | 217 | 112 | 0 | 4 | 220 | 5 | 221 | 4.79e-77 | 231 |
| MsG0480018904.01.T01 | AT2G29490 | 49.029 | 206 | 104 | 1 | 5 | 209 | 4 | 209 | 1.12e-66 | 205 |
| MsG0480018904.01.T01 | AT2G29450 | 49.282 | 209 | 104 | 2 | 3 | 209 | 1 | 209 | 1.21e-66 | 205 |
| MsG0480018904.01.T01 | AT2G29460 | 44.240 | 217 | 120 | 1 | 5 | 220 | 4 | 220 | 4.90e-65 | 201 |
| MsG0480018904.01.T01 | AT2G29480 | 46.829 | 205 | 108 | 1 | 6 | 209 | 5 | 209 | 2.86e-64 | 199 |
| MsG0480018904.01.T01 | AT2G29440 | 44.495 | 218 | 120 | 1 | 4 | 220 | 2 | 219 | 8.11e-63 | 195 |
| MsG0480018904.01.T01 | AT2G29470 | 45.146 | 206 | 111 | 2 | 6 | 209 | 5 | 210 | 6.17e-60 | 188 |
| MsG0480018904.01.T01 | AT1G78320 | 42.654 | 211 | 110 | 7 | 6 | 211 | 2 | 206 | 4.17e-51 | 165 |
| MsG0480018904.01.T01 | AT1G59670 | 42.202 | 218 | 118 | 4 | 4 | 213 | 2 | 219 | 1.35e-50 | 164 |
| MsG0480018904.01.T01 | AT1G59700 | 43.636 | 220 | 116 | 4 | 4 | 215 | 2 | 221 | 2.05e-50 | 164 |
| MsG0480018904.01.T01 | AT5G62480 | 38.182 | 220 | 127 | 2 | 6 | 216 | 6 | 225 | 3.98e-49 | 160 |
| MsG0480018904.01.T01 | AT1G74590 | 39.091 | 220 | 125 | 4 | 8 | 220 | 7 | 224 | 5.37e-49 | 160 |
| MsG0480018904.01.T01 | AT1G27130 | 38.636 | 220 | 127 | 4 | 4 | 215 | 2 | 221 | 6.58e-49 | 160 |
| MsG0480018904.01.T01 | AT1G17170 | 40.000 | 215 | 125 | 3 | 7 | 220 | 3 | 214 | 1.90e-48 | 158 |
| MsG0480018904.01.T01 | AT1G78340 | 41.509 | 212 | 113 | 6 | 7 | 213 | 3 | 208 | 7.27e-48 | 157 |
| MsG0480018904.01.T01 | AT1G53680 | 41.063 | 207 | 117 | 3 | 8 | 211 | 7 | 211 | 3.62e-46 | 152 |
| MsG0480018904.01.T01 | AT1G10370 | 38.710 | 217 | 126 | 2 | 6 | 215 | 3 | 219 | 4.58e-46 | 152 |
| MsG0480018904.01.T01 | AT1G17180 | 39.810 | 211 | 118 | 4 | 7 | 213 | 3 | 208 | 1.07e-45 | 151 |
| MsG0480018904.01.T01 | AT1G78370 | 36.765 | 204 | 126 | 2 | 11 | 213 | 7 | 208 | 5.26e-45 | 149 |
| MsG0480018904.01.T01 | AT1G69930 | 35.945 | 217 | 133 | 3 | 3 | 213 | 7 | 223 | 7.62e-45 | 149 |
| MsG0480018904.01.T01 | AT1G78380 | 37.681 | 207 | 126 | 2 | 8 | 213 | 4 | 208 | 1.03e-42 | 144 |
| MsG0480018904.01.T01 | AT1G10360 | 37.333 | 225 | 125 | 7 | 1 | 215 | 1 | 219 | 7.94e-42 | 142 |
| MsG0480018904.01.T01 | AT1G69920 | 35.909 | 220 | 133 | 4 | 4 | 215 | 30 | 249 | 4.04e-41 | 140 |
| MsG0480018904.01.T01 | AT1G17190 | 36.967 | 211 | 124 | 6 | 7 | 213 | 4 | 209 | 5.14e-41 | 139 |
| MsG0480018904.01.T01 | AT3G43800 | 36.893 | 206 | 123 | 4 | 5 | 205 | 2 | 205 | 4.82e-40 | 137 |
| MsG0480018904.01.T01 | AT1G78360 | 36.842 | 209 | 126 | 4 | 8 | 213 | 4 | 209 | 1.02e-37 | 131 |
| MsG0480018904.01.T01 | AT1G27140 | 34.685 | 222 | 134 | 5 | 4 | 215 | 2 | 222 | 1.20e-36 | 129 |
| MsG0480018904.01.T01 | AT1G78320 | 36.667 | 210 | 97 | 7 | 6 | 211 | 2 | 179 | 4.30e-36 | 126 |
| MsG0480018904.01.T01 | AT5G62480 | 31.050 | 219 | 118 | 2 | 6 | 216 | 6 | 199 | 7.25e-32 | 115 |
| MsG0480018904.01.T01 | AT5G62480 | 31.050 | 219 | 117 | 2 | 6 | 216 | 6 | 198 | 1.45e-31 | 115 |
Find 55 sgRNAs with CRISPR-Local
Find 183 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGACTCCATTTATATATCTT+TGG | 0.228697 | 4:-11408702 | None:intergenic |
| TTTGAAGGAAAATTAAATTA+TGG | 0.228904 | 4:-11408847 | None:intergenic |
| ATAAATCATCCCTCTAAAAT+TGG | 0.254634 | 4:-11408815 | None:intergenic |
| CTGCCAATTTCATTGGTTAT+TGG | 0.261177 | 4:+11408625 | MsG0480018904.01.T01:CDS |
| TAGTATCTTTAGAGCTTCTA+AGG | 0.264171 | 4:-11408541 | None:intergenic |
| TGAAGCTGAAGCTTTGAAAA+AGG | 0.266929 | 4:-11408784 | None:intergenic |
| TTAGAGGGATGATTTATAAT+TGG | 0.274975 | 4:+11408821 | MsG0480018904.01.T01:three_prime_UTR |
| AAGTGAGGCTATTAGGAAAA+TGG | 0.276631 | 4:+11405702 | MsG0480018904.01.T01:CDS |
| CAAGAAGAAGTGAGGCTATT+AGG | 0.278486 | 4:+11405695 | MsG0480018904.01.T01:CDS |
| AACCCAATAACCAATGAAAT+TGG | 0.291512 | 4:-11408628 | None:intergenic |
| TGCCAATTTCATTGGTTATT+GGG | 0.296047 | 4:+11408626 | MsG0480018904.01.T01:CDS |
| AAAGAGCCTTGGCTCGGTTT+TGG | 0.299606 | 4:+11405960 | MsG0480018904.01.T01:CDS |
| ATAAAGGACAAGAAATTCTT+TGG | 0.317481 | 4:+11408573 | MsG0480018904.01.T01:CDS |
| AGATCAATTCTGTTGCTAAA+TGG | 0.322966 | 4:-11405731 | None:intergenic |
| GGCAATCCTTCCTTGATAAC+AGG | 0.328774 | 4:-11408741 | None:intergenic |
| TGCTTAGATGTGTTTCCTTT+CGG | 0.331326 | 4:+11408960 | MsG0480018904.01.T01:three_prime_UTR |
| GATATTGCTGCCAATTTCAT+TGG | 0.333449 | 4:+11408618 | MsG0480018904.01.T01:CDS |
| CTGCAATATGGAATGCTTGC+TGG | 0.367214 | 4:+11408481 | MsG0480018904.01.T01:CDS |
| GATACTAGAGGATGAAATAA+AGG | 0.371068 | 4:+11408557 | MsG0480018904.01.T01:CDS |
| TAGTACAAGAGGATAAATAT+TGG | 0.374823 | 4:+11408989 | MsG0480018904.01.T01:three_prime_UTR |
| ATAGGCACCTTCTTGTAAAC+AGG | 0.385437 | 4:-11405836 | None:intergenic |
| AATTTCCAAAGATATATAAA+TGG | 0.386278 | 4:+11408697 | MsG0480018904.01.T01:CDS |
| CAGCAAGCATTCCATATTGC+AGG | 0.405973 | 4:-11408480 | None:intergenic |
| AGTACAAGAGGATAAATATT+GGG | 0.415201 | 4:+11408990 | MsG0480018904.01.T01:three_prime_UTR |
| GATATATTACAAGAAATTGC+AGG | 0.426457 | 4:+11408651 | MsG0480018904.01.T01:CDS |
| TTTCCGTTGTGAACAAGAAT+AGG | 0.431370 | 4:-11405854 | None:intergenic |
| ATGATAAGAGACTCAGCAAT+TGG | 0.431930 | 4:-11405878 | None:intergenic |
| AGTGAGGCTATTAGGAAAAT+GGG | 0.434579 | 4:+11405703 | MsG0480018904.01.T01:CDS |
| AAGGCAAATAGTTCATCTCT+TGG | 0.450565 | 4:-11408765 | None:intergenic |
| CGAGCCAAGGCTCTTTCATA+AGG | 0.450913 | 4:-11405953 | None:intergenic |
| TATCAGTCACCCTGTTATCA+AGG | 0.455116 | 4:+11408731 | MsG0480018904.01.T01:CDS |
| TTCTTTGGTGGTGAAACCTT+AGG | 0.460299 | 4:+11408588 | MsG0480018904.01.T01:CDS |
| ATTACAAGAAATTGCAGGGT+TGG | 0.478448 | 4:+11408656 | MsG0480018904.01.T01:CDS |
| GATCTTGCTTTAAAACTCAA+AGG | 0.505899 | 4:+11405749 | MsG0480018904.01.T01:CDS |
| TTCGGATAAATTAGTACAAG+AGG | 0.531004 | 4:+11408978 | MsG0480018904.01.T01:three_prime_UTR |
| TAAGGATCTTGAGACAAAAG+TGG | 0.532667 | 4:-11405935 | None:intergenic |
| ATACAATCCTGTTTACAAGA+AGG | 0.533721 | 4:+11405829 | MsG0480018904.01.T01:CDS |
| AGCAATATCTACAAGTCCTA+AGG | 0.546214 | 4:-11408604 | None:intergenic |
| GTCTAAGACTCTTGATGACA+AGG | 0.547006 | 4:+11405982 | MsG0480018904.01.T01:CDS |
| AAGGACAAGAAATTCTTTGG+TGG | 0.552873 | 4:+11408576 | MsG0480018904.01.T01:CDS |
| CTTGTACTAATTTATCCGAA+AGG | 0.557708 | 4:-11408975 | None:intergenic |
| GCAAATAGTTCATCTCTTGG+AGG | 0.560186 | 4:-11408762 | None:intergenic |
| CTTATGAAAGAGCCTTGGCT+CGG | 0.573191 | 4:+11405954 | MsG0480018904.01.T01:CDS |
| AGTCACCCTGTTATCAAGGA+AGG | 0.579962 | 4:+11408735 | MsG0480018904.01.T01:CDS |
| AGATCCTTATGAAAGAGCCT+TGG | 0.584406 | 4:+11405949 | MsG0480018904.01.T01:CDS |
| ATATATTACAAGAAATTGCA+GGG | 0.587089 | 4:+11408652 | MsG0480018904.01.T01:CDS |
| TTGAATACATAGATGATACA+TGG | 0.594386 | 4:+11405903 | MsG0480018904.01.T01:CDS |
| AGGACGTGAGAAAGCTGTGG+AGG | 0.607732 | 4:+11408515 | MsG0480018904.01.T01:CDS |
| GCTTGCTGGAGTGATGAGAA+AGG | 0.621777 | 4:+11408495 | MsG0480018904.01.T01:CDS |
| GCAATCCTTCCTTGATAACA+GGG | 0.634358 | 4:-11408740 | None:intergenic |
| CTTAGACCAAAACCGAGCCA+AGG | 0.650325 | 4:-11405966 | None:intergenic |
| CTGCAAATCAAGAAGAAGTG+AGG | 0.653676 | 4:+11405687 | MsG0480018904.01.T01:CDS |
| GAAAGGACGTGAGAAAGCTG+TGG | 0.660199 | 4:+11408512 | MsG0480018904.01.T01:CDS |
| AGAAGCTCTAAAGATACTAG+AGG | 0.667533 | 4:+11408545 | MsG0480018904.01.T01:CDS |
| GTGCCTATTCTTGTTCACAA+CGG | 0.690008 | 4:+11405851 | MsG0480018904.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CGAAAAATTTAAAAAAAAAT+TGG | - | Chr4:11407436-11407455 | None:intergenic | 10.0% |
| !!! | ACTGTATAATTTTTTTTATA+GGG | - | Chr4:11407583-11407602 | None:intergenic | 10.0% |
| !!! | ATGAATTTTTTTTATTTTTC+CGG | + | Chr4:11407270-11407289 | MsG0480018904.01.T01:intron | 10.0% |
| !!! | CAATTTCTTTTAAATTTTTT+CGG | - | Chr4:11406516-11406535 | None:intergenic | 10.0% |
| !!! | TGATTTTTTTTTTATTTTTC+CGG | - | Chr4:11406652-11406671 | None:intergenic | 10.0% |
| !!! | TTTAAGTTTAATATACTATT+TGG | - | Chr4:11408386-11408405 | None:intergenic | 10.0% |
| !! | AAACAAATATGAATTATGTT+TGG | + | Chr4:11406932-11406951 | MsG0480018904.01.T01:intron | 15.0% |
| !! | AACCAATTCTAATAAAATAA+AGG | - | Chr4:11407791-11407810 | None:intergenic | 15.0% |
| !! | AATTTCCAAAGATATATAAA+TGG | + | Chr4:11408697-11408716 | MsG0480018904.01.T01:CDS | 15.0% |
| !! | CGAAAAAATTTAAAAGAAAT+TGG | + | Chr4:11406514-11406533 | MsG0480018904.01.T01:intron | 15.0% |
| !! | TAAAAATAAAAAGTAAAACC+TGG | + | Chr4:11406576-11406595 | MsG0480018904.01.T01:intron | 15.0% |
| !! | TAAAAATGAAAACAAAAATC+TGG | + | Chr4:11406546-11406565 | MsG0480018904.01.T01:intron | 15.0% |
| !! | TAAAAATGAAAACAAAAATC+TGG | - | Chr4:11406565-11406546 | None:intergenic | 15.0% |
| !! | TTAAAAAAATGAAAACATTC+TGG | - | Chr4:11407346-11407365 | None:intergenic | 15.0% |
| !! | TTTGAAGGAAAATTAAATTA+TGG | - | Chr4:11408850-11408869 | None:intergenic | 15.0% |
| !!! | ATATTTGTGTAGTTTATTTT+AGG | + | Chr4:11406199-11406218 | MsG0480018904.01.T01:intron | 15.0% |
| !!! | GAAATTTATTAATTTTTTCC+AGG | - | Chr4:11407344-11407325 | None:intergenic | 15.0% |
| !!! | GACTGTATAATTTTTTTTAT+AGG | - | Chr4:11407584-11407603 | None:intergenic | 15.0% |
| !!! | TACATAAGATTTTTCATTTT+TGG | + | Chr4:11408445-11408464 | MsG0480018904.01.T01:intron | 15.0% |
| !!! | TATTTGTGTAGTTTATTTTA+GGG | + | Chr4:11406200-11406219 | MsG0480018904.01.T01:intron | 15.0% |
| !!! | TTTTCAAAAATTTCAAGATT+TGG | + | Chr4:11407113-11407132 | MsG0480018904.01.T01:intron | 15.0% |
| !! | AAGAAAAATAAGTGTATGTT+TGG | + | Chr4:11406128-11406147 | MsG0480018904.01.T01:intron | 20.0% |
| !! | ATATATTACAAGAAATTGCA+GGG | + | Chr4:11408652-11408671 | MsG0480018904.01.T01:CDS | 20.0% |
| !! | CTTTAATGCTATCATAATTA+TGG | - | Chr4:11406072-11406091 | None:intergenic | 20.0% |
| !! | GGTATATAAATCATGTTATA+CGG | + | Chr4:11407218-11407237 | MsG0480018904.01.T01:intron | 20.0% |
| !! | GGTATATAAATCATGTTATA+CGG | - | Chr4:11407237-11407218 | None:intergenic | 20.0% |
| !! | GTATAACATGATTTATATAC+CGG | + | Chr4:11406704-11406723 | MsG0480018904.01.T01:intron | 20.0% |
| !! | GTATAACATGATTTATATAC+CGG | - | Chr4:11406723-11406704 | None:intergenic | 20.0% |
| !! | TAATATTTGCCTTAATAACT+TGG | + | Chr4:11408201-11408220 | MsG0480018904.01.T01:intron | 20.0% |
| !! | TCCTAAAAATCAAATTTCTT+AGG | + | Chr4:11405626-11405645 | MsG0480018904.01.T01:five_prime_UTR | 20.0% |
| !!! | ACCTAAGAAATTTGATTTTT+AGG | - | Chr4:11405630-11405649 | None:intergenic | 20.0% |
| !!! | AGCCTTTATTTTATTAGAAT+TGG | + | Chr4:11407786-11407805 | MsG0480018904.01.T01:intron | 20.0% |
| !!! | ATCGAAAAAATCTTTTTTAC+AGG | - | Chr4:11406271-11406290 | None:intergenic | 20.0% |
| !!! | ATCGAAAGAATCATTTTTAT+AGG | + | Chr4:11407715-11407734 | MsG0480018904.01.T01:intron | 20.0% |
| !!! | ATTTTTACTCATTTATGTCT+TGG | + | Chr4:11409018-11409037 | MsG0480018904.01.T01:three_prime_UTR | 20.0% |
| !!! | TCGAAAAAATCTTTTTTACA+GGG | - | Chr4:11406270-11406289 | None:intergenic | 20.0% |
| !!! | TCGAAAGAATCATTTTTATA+GGG | + | Chr4:11407716-11407735 | MsG0480018904.01.T01:intron | 20.0% |
| !!! | TTCCTGATTTTTTTTAATAC+CGG | + | Chr4:11406630-11406649 | MsG0480018904.01.T01:intron | 20.0% |
| ! | AGTACAAGAGGATAAATATT+GGG | + | Chr4:11408990-11409009 | MsG0480018904.01.T01:three_prime_UTR | 25.0% |
| ! | ATAAAGGACAAGAAATTCTT+TGG | + | Chr4:11408573-11408592 | MsG0480018904.01.T01:CDS | 25.0% |
| ! | ATACATTGTATCCTGTTATT+CGG | + | Chr4:11406738-11406757 | MsG0480018904.01.T01:intron | 25.0% |
| ! | ATACATTGTATCCTGTTATT+CGG | - | Chr4:11406757-11406738 | None:intergenic | 25.0% |
| ! | GAAAGAATCTTCATATTTCA+GGG | + | Chr4:11407687-11407706 | MsG0480018904.01.T01:intron | 25.0% |
| ! | GAAAGAATCTTCATATTTCA+GGG | - | Chr4:11407706-11407687 | None:intergenic | 25.0% |
| ! | GATATATTACAAGAAATTGC+AGG | + | Chr4:11408651-11408670 | MsG0480018904.01.T01:CDS | 25.0% |
| ! | TAGTACAAGAGGATAAATAT+TGG | + | Chr4:11408989-11409008 | MsG0480018904.01.T01:three_prime_UTR | 25.0% |
| ! | TATGATAGCATTAAAGTAGA+GGG | + | Chr4:11406076-11406095 | MsG0480018904.01.T01:intron | 25.0% |
| ! | TGACTCCATTTATATATCTT+TGG | - | Chr4:11408705-11408724 | None:intergenic | 25.0% |
| ! | TTAATATACTATTTGGACTG+CGG | - | Chr4:11408379-11408398 | None:intergenic | 25.0% |
| ! | TTAGAGGGATGATTTATAAT+TGG | + | Chr4:11408821-11408840 | MsG0480018904.01.T01:three_prime_UTR | 25.0% |
| ! | TTATGATAGCATTAAAGTAG+AGG | + | Chr4:11406075-11406094 | MsG0480018904.01.T01:intron | 25.0% |
| ! | TTCCGGTATTAAAAAAAATC+AGG | - | Chr4:11406635-11406654 | None:intergenic | 25.0% |
| ! | TTGAATACATAGATGATACA+TGG | + | Chr4:11405903-11405922 | MsG0480018904.01.T01:CDS | 25.0% |
| !! | GCAAAAAAATAACAAGCTTT+TGG | - | Chr4:11408904-11408923 | None:intergenic | 25.0% |
| !! | TGTATGTTTGGATTCATTTT+AGG | + | Chr4:11406140-11406159 | MsG0480018904.01.T01:intron | 25.0% |
| !! | TTAGTTTCTACTAGTTTCAA+TGG | - | Chr4:11406966-11406985 | None:intergenic | 25.0% |
| !! | TTTTCTTCTGAGTATTTGTA+TGG | - | Chr4:11405779-11405798 | None:intergenic | 25.0% |
| !! | TTTTGAGCTCACAAAAAAAA+TGG | + | Chr4:11405661-11405680 | MsG0480018904.01.T01:exon | 25.0% |
| !!! | ATAAATCATCCCTCTAAAAT+TGG | - | Chr4:11408818-11408837 | None:intergenic | 25.0% |
| !!! | ATTAAACTTAAACTTGCTAG+TGG | + | Chr4:11408394-11408413 | MsG0480018904.01.T01:intron | 25.0% |
| !!! | ATTTTTTTTATAGGGACATG+TGG | - | Chr4:11407575-11407594 | None:intergenic | 25.0% |
| !!! | CGAAAGAATCATTTTTATAG+GGG | + | Chr4:11407717-11407736 | MsG0480018904.01.T01:intron | 25.0% |
| !!! | GAAAGAATCATTTTTATAGG+GGG | + | Chr4:11407718-11407737 | MsG0480018904.01.T01:intron | 25.0% |
| !!! | GTACAACATGATTATTTTGA+AGG | - | Chr4:11408865-11408884 | None:intergenic | 25.0% |
| !!! | TTCCAGATTTTTTTCAATAC+CGG | - | Chr4:11407292-11407311 | None:intergenic | 25.0% |
| AAAAATCATGTCCGAATAAC+AGG | - | Chr4:11406752-11406771 | None:intergenic | 30.0% | |
| AACCCAATAACCAATGAAAT+TGG | - | Chr4:11408631-11408650 | None:intergenic | 30.0% | |
| AGATCAATTCTGTTGCTAAA+TGG | - | Chr4:11405734-11405753 | None:intergenic | 30.0% | |
| ATACAATCCTGTTTACAAGA+AGG | + | Chr4:11405829-11405848 | MsG0480018904.01.T01:CDS | 30.0% | |
| ATGATAGCATTAAAGTAGAG+GGG | + | Chr4:11406077-11406096 | MsG0480018904.01.T01:intron | 30.0% | |
| CGAAAGAATCTTCATATTTC+AGG | + | Chr4:11407686-11407705 | MsG0480018904.01.T01:intron | 30.0% | |
| CGAAAGAATCTTCATATTTC+AGG | - | Chr4:11407705-11407686 | None:intergenic | 30.0% | |
| CTTGTACTAATTTATCCGAA+AGG | - | Chr4:11408978-11408997 | None:intergenic | 30.0% | |
| GAGTACATTCCAAGTTATTA+AGG | - | Chr4:11408213-11408232 | None:intergenic | 30.0% | |
| GATACTAGAGGATGAAATAA+AGG | + | Chr4:11408557-11408576 | MsG0480018904.01.T01:CDS | 30.0% | |
| TACCTCAAACTTAGAATTGT+TGG | + | Chr4:11408107-11408126 | MsG0480018904.01.T01:intron | 30.0% | |
| TGTCAATATAACTTGATGCT+AGG | + | Chr4:11407812-11407831 | MsG0480018904.01.T01:intron | 30.0% | |
| TTCGGATAAATTAGTACAAG+AGG | + | Chr4:11408978-11408997 | MsG0480018904.01.T01:three_prime_UTR | 30.0% | |
| ! | AAAGTAGAGCCAATTTTAGA+GGG | + | Chr4:11408806-11408825 | MsG0480018904.01.T01:exon | 30.0% |
| ! | CAATGTATATTGATTGACAC+CGG | + | Chr4:11407197-11407216 | MsG0480018904.01.T01:intron | 30.0% |
| ! | CAATGTATATTGATTGACAC+CGG | - | Chr4:11407216-11407197 | None:intergenic | 30.0% |
| ! | TGCCAATTTCATTGGTTATT+GGG | + | Chr4:11408626-11408645 | MsG0480018904.01.T01:CDS | 30.0% |
| ! | TTCCGGTATTGAAAAAAATC+TGG | + | Chr4:11407287-11407306 | MsG0480018904.01.T01:intron | 30.0% |
| ! | TTTAGATTTTGCCTGCAATA+TGG | + | Chr4:11408469-11408488 | MsG0480018904.01.T01:intron | 30.0% |
| !! | GATCTTGCTTTAAAACTCAA+AGG | + | Chr4:11405749-11405768 | MsG0480018904.01.T01:CDS | 30.0% |
| !! | TAGTATCTTTAGAGCTTCTA+AGG | - | Chr4:11408544-11408563 | None:intergenic | 30.0% |
| !!! | ATTTTTTTAATAGGGACACG+TGG | + | Chr4:11406412-11406431 | MsG0480018904.01.T01:intron | 30.0% |
| !!! | GTTTGGATTCATTTTAGGAT+AGG | + | Chr4:11406145-11406164 | MsG0480018904.01.T01:intron | 30.0% |
| AAAAACCATGTCCGAATAAC+AGG | + | Chr4:11407171-11407190 | MsG0480018904.01.T01:intron | 35.0% | |
| AAGGACAAGAAATTCTTTGG+TGG | + | Chr4:11408576-11408595 | MsG0480018904.01.T01:CDS | 35.0% | |
| AAGGCAAATAGTTCATCTCT+TGG | - | Chr4:11408768-11408787 | None:intergenic | 35.0% | |
| AAGTGAGGCTATTAGGAAAA+TGG | + | Chr4:11405702-11405721 | MsG0480018904.01.T01:CDS | 35.0% | |
| AGCAATATCTACAAGTCCTA+AGG | - | Chr4:11408607-11408626 | None:intergenic | 35.0% | |
| AGTGAGGCTATTAGGAAAAT+GGG | + | Chr4:11405703-11405722 | MsG0480018904.01.T01:CDS | 35.0% | |
| ATGATAAGAGACTCAGCAAT+TGG | - | Chr4:11405881-11405900 | None:intergenic | 35.0% | |
| ATTACAAGAAATTGCAGGGT+TGG | + | Chr4:11408656-11408675 | MsG0480018904.01.T01:CDS | 35.0% | |
| GAATCTTCATATTTCAGGGT+TGG | + | Chr4:11407691-11407710 | MsG0480018904.01.T01:intron | 35.0% | |
| GAATCTTCATATTTCAGGGT+TGG | - | Chr4:11407710-11407691 | None:intergenic | 35.0% | |
| GATATTGCTGCCAATTTCAT+TGG | + | Chr4:11408618-11408637 | MsG0480018904.01.T01:CDS | 35.0% | |
| GATTCTCCCTAATGTCAATT+TGG | + | Chr4:11408261-11408280 | MsG0480018904.01.T01:intron | 35.0% | |
| GTCCAACAATTCTAAGTTTG+AGG | - | Chr4:11408112-11408131 | None:intergenic | 35.0% | |
| TAAGGATCTTGAGACAAAAG+TGG | - | Chr4:11405938-11405957 | None:intergenic | 35.0% | |
| TAGAATTGTTGGACAAGCAT+TGG | + | Chr4:11408118-11408137 | MsG0480018904.01.T01:intron | 35.0% | |
| TCCCTAATGTCAATTTGGAT+GGG | + | Chr4:11408266-11408285 | MsG0480018904.01.T01:intron | 35.0% | |
| TGCTTAGATGTGTTTCCTTT+CGG | + | Chr4:11408960-11408979 | MsG0480018904.01.T01:three_prime_UTR | 35.0% | |
| TTTCCGTTGTGAACAAGAAT+AGG | - | Chr4:11405857-11405876 | None:intergenic | 35.0% | |
| ! | ACGTTTTTACCCCTGTAATA+TGG | + | Chr4:11406228-11406247 | MsG0480018904.01.T01:intron | 35.0% |
| ! | CAAAGTAGAGCCAATTTTAG+AGG | + | Chr4:11408805-11408824 | MsG0480018904.01.T01:exon | 35.0% |
| ! | CTGCCAATTTCATTGGTTAT+TGG | + | Chr4:11408625-11408644 | MsG0480018904.01.T01:CDS | 35.0% |
| ! | GTCACCTTTTTATGATGACA+TGG | - | Chr4:11407613-11407632 | None:intergenic | 35.0% |
| ! | TTTTTACCCCCCTGTAATAT+GGG | - | Chr4:11407759-11407778 | None:intergenic | 35.0% |
| !! | AGAAGCTCTAAAGATACTAG+AGG | + | Chr4:11408545-11408564 | MsG0480018904.01.T01:CDS | 35.0% |
| !! | TGAAGCTGAAGCTTTGAAAA+AGG | - | Chr4:11408787-11408806 | None:intergenic | 35.0% |
| AGATCCTTATGAAAGAGCCT+TGG | + | Chr4:11405949-11405968 | MsG0480018904.01.T01:CDS | 40.0% | |
| AGCCCATCCAAATTGACATT+AGG | - | Chr4:11408271-11408290 | None:intergenic | 40.0% | |
| ATAGGCACCTTCTTGTAAAC+AGG | - | Chr4:11405839-11405858 | None:intergenic | 40.0% | |
| ATGTATCTGCTACACCAATG+CGG | - | Chr4:11408342-11408361 | None:intergenic | 40.0% | |
| CAAGAAGAAGTGAGGCTATT+AGG | + | Chr4:11405695-11405714 | MsG0480018904.01.T01:CDS | 40.0% | |
| CGTGCCATGTCATCATAAAA+AGG | + | Chr4:11407606-11407625 | MsG0480018904.01.T01:intron | 40.0% | |
| CTCCCTAATGTCAATTTGGA+TGG | + | Chr4:11408265-11408284 | MsG0480018904.01.T01:intron | 40.0% | |
| CTGCAAATCAAGAAGAAGTG+AGG | + | Chr4:11405687-11405706 | MsG0480018904.01.T01:CDS | 40.0% | |
| GCAAATAGTTCATCTCTTGG+AGG | - | Chr4:11408765-11408784 | None:intergenic | 40.0% | |
| GCCCATCCAAATTGACATTA+GGG | - | Chr4:11408270-11408289 | None:intergenic | 40.0% | |
| GTCATCATAAAAAGGTGACG+TGG | + | Chr4:11407614-11407633 | MsG0480018904.01.T01:intron | 40.0% | |
| GTCATCATAAAAAGGTGACG+TGG | - | Chr4:11407633-11407614 | None:intergenic | 40.0% | |
| GTGCCTATTCTTGTTCACAA+CGG | + | Chr4:11405851-11405870 | MsG0480018904.01.T01:CDS | 40.0% | |
| TAGGGAGAATCGAATCTGAT+AGG | - | Chr4:11408252-11408271 | None:intergenic | 40.0% | |
| TATCAGTCACCCTGTTATCA+AGG | + | Chr4:11408731-11408750 | MsG0480018904.01.T01:CDS | 40.0% | |
| TGATTGCAAGAGCTATGTCA+GGG | - | Chr4:11408079-11408098 | None:intergenic | 40.0% | |
| TGTATCCTGTTATTCGGACA+TGG | - | Chr4:11406763-11406744 | None:intergenic | 40.0% | |
| TTGGAATGTACTCATCGTCA+AGG | + | Chr4:11408220-11408239 | MsG0480018904.01.T01:intron | 40.0% | |
| ! | GCAATCCTTCCTTGATAACA+GGG | - | Chr4:11408743-11408762 | None:intergenic | 40.0% |
| ! | GTCTAAGACTCTTGATGACA+AGG | + | Chr4:11405982-11406001 | MsG0480018904.01.T01:CDS | 40.0% |
| ! | GTTTTTACCCCCCTGTAATA+TGG | - | Chr4:11407760-11407779 | None:intergenic | 40.0% |
| ! | TCATGAATTAGTCTGACTGC+TGG | + | Chr4:11408046-11408065 | MsG0480018904.01.T01:intron | 40.0% |
| !! | GTCACCTTTTTATGATGACG+TGG | + | Chr4:11406371-11406390 | MsG0480018904.01.T01:intron | 40.0% |
| !! | TTCTTTGGTGGTGAAACCTT+AGG | + | Chr4:11408588-11408607 | MsG0480018904.01.T01:CDS | 40.0% |
| ACCAGAACTCGCCATATTAC+AGG | - | Chr4:11406242-11406261 | None:intergenic | 45.0% | |
| AGAACTCGCCCATATTACAG+GGG | + | Chr4:11407748-11407767 | MsG0480018904.01.T01:intron | 45.0% | |
| AGTCACCCTGTTATCAAGGA+AGG | + | Chr4:11408735-11408754 | MsG0480018904.01.T01:CDS | 45.0% | |
| AGTGTGTCAGATGGGATCAA+AGG | - | Chr4:11406329-11406348 | None:intergenic | 45.0% | |
| CACCAATGCGGTCGTTATTA+AGG | - | Chr4:11408330-11408349 | None:intergenic | 45.0% | |
| CAGAACTCGCCATATTACAG+GGG | - | Chr4:11406240-11406259 | None:intergenic | 45.0% | |
| CAGAACTCGCCCATATTACA+GGG | + | Chr4:11407747-11407766 | MsG0480018904.01.T01:intron | 45.0% | |
| CAGCAAGCATTCCATATTGC+AGG | - | Chr4:11408483-11408502 | None:intergenic | 45.0% | |
| CCAGAACTCGCCATATTACA+GGG | - | Chr4:11406241-11406260 | None:intergenic | 45.0% | |
| CGTGCCACGTCATCATAAAA+AGG | - | Chr4:11406378-11406397 | None:intergenic | 45.0% | |
| CTGCAATATGGAATGCTTGC+TGG | + | Chr4:11408481-11408500 | MsG0480018904.01.T01:CDS | 45.0% | |
| CTTATGAAAGAGCCTTGGCT+CGG | + | Chr4:11405954-11405973 | MsG0480018904.01.T01:CDS | 45.0% | |
| GTGATTGCAAGAGCTATGTC+AGG | - | Chr4:11408080-11408099 | None:intergenic | 45.0% | |
| TGCCTTAATAACGACCGCAT+TGG | + | Chr4:11408325-11408344 | MsG0480018904.01.T01:intron | 45.0% | |
| ! | GGCAATCCTTCCTTGATAAC+AGG | - | Chr4:11408744-11408763 | None:intergenic | 45.0% |
| !! | TGTTGGACAAGCATTGGTCA+TGG | + | Chr4:11408124-11408143 | MsG0480018904.01.T01:intron | 45.0% |
| !! | AAAAAAAGATAAAAAAAATA+TGG | - | Chr4:11406886-11406867 | None:intergenic | 5.0% |
| !!! | AAAAAAAATCATATTTTTTT+CGG | + | Chr4:11406661-11406680 | MsG0480018904.01.T01:intron | 5.0% |
| !!! | AAAAAAATTCATATTTTTTT+TGG | - | Chr4:11407262-11407281 | None:intergenic | 5.0% |
| !!! | CAATTTTTTTTTAAATTTTT+CGG | + | Chr4:11407434-11407453 | MsG0480018904.01.T01:intron | 5.0% |
| !!! | GTATAATTATTTTTTTAATA+GGG | + | Chr4:11406404-11406423 | MsG0480018904.01.T01:intron | 5.0% |
| !!! | TGTATAATTATTTTTTTAAT+AGG | + | Chr4:11406403-11406422 | MsG0480018904.01.T01:intron | 5.0% |
| AACTCGCCCATATTACAGGG+GGG | + | Chr4:11407750-11407769 | MsG0480018904.01.T01:intron | 50.0% | |
| AGCACCTAGAGTGTGTCAGA+TGG | - | Chr4:11406338-11406357 | None:intergenic | 50.0% | |
| AGTGTGTCAGATGGGATCAG+GGG | + | Chr4:11407657-11407676 | MsG0480018904.01.T01:intron | 50.0% | |
| CCAGAACTCGCCCATATTAC+AGG | + | Chr4:11407746-11407765 | MsG0480018904.01.T01:intron | 50.0% | |
| CCCTGTAATATGGCGAGTTC+TGG | + | Chr4:11406238-11406257 | MsG0480018904.01.T01:intron | 50.0% | |
| CCTGTAATATGGGCGAGTTC+TGG | - | Chr4:11407749-11407768 | None:intergenic | 50.0% | |
| CGAGCCAAGGCTCTTTCATA+AGG | - | Chr4:11405956-11405975 | None:intergenic | 50.0% | |
| CTTAGACCAAAACCGAGCCA+AGG | - | Chr4:11405969-11405988 | None:intergenic | 50.0% | |
| GAAAGGACGTGAGAAAGCTG+TGG | + | Chr4:11408512-11408531 | MsG0480018904.01.T01:CDS | 50.0% | |
| GAACTCGCCCATATTACAGG+GGG | + | Chr4:11407749-11407768 | MsG0480018904.01.T01:intron | 50.0% | |
| GAGTGTGTCAGATGGGATCA+GGG | + | Chr4:11407656-11407675 | MsG0480018904.01.T01:intron | 50.0% | |
| GATCCCATCTGACACACTCT+AGG | + | Chr4:11406331-11406350 | MsG0480018904.01.T01:intron | 50.0% | |
| GCACCTAGAGTGTGTCAGAT+GGG | - | Chr4:11406337-11406356 | None:intergenic | 50.0% | |
| TAGAGGGGAGAGAGTTGTTC+AGG | + | Chr4:11406092-11406111 | MsG0480018904.01.T01:intron | 50.0% | |
| ! | GCTTGCTGGAGTGATGAGAA+AGG | + | Chr4:11408495-11408514 | MsG0480018904.01.T01:CDS | 50.0% |
| !!! | AAAGAGCCTTGGCTCGGTTT+TGG | + | Chr4:11405960-11405979 | MsG0480018904.01.T01:CDS | 50.0% |
| AGCACCTGGAGTGTGTCAGA+TGG | + | Chr4:11407648-11407667 | MsG0480018904.01.T01:intron | 55.0% | |
| AGGACGTGAGAAAGCTGTGG+AGG | + | Chr4:11408515-11408534 | MsG0480018904.01.T01:CDS | 55.0% | |
| GATCCCATCTGACACACTCC+AGG | - | Chr4:11407655-11407674 | None:intergenic | 55.0% | |
| GCACCTGGAGTGTGTCAGAT+GGG | + | Chr4:11407649-11407668 | MsG0480018904.01.T01:intron | 55.0% | |
| GGAGTGTGTCAGATGGGATC+AGG | + | Chr4:11407655-11407674 | MsG0480018904.01.T01:intron | 55.0% | |
| !! | ACACACTCTAGGTGCTGACG+TGG | + | Chr4:11406342-11406361 | MsG0480018904.01.T01:intron | 55.0% |
| !! | ACACACTCCAGGTGCTGACG+TGG | - | Chr4:11407644-11407663 | None:intergenic | 60.0% |
| TGGCGCGCCACGTCAGCACC+TGG | + | Chr4:11407634-11407653 | MsG0480018904.01.T01:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 11405614 | 11409053 | 11405614 | ID=MsG0480018904.01;Name=MsG0480018904.01 |
| Chr4 | mRNA | 11405614 | 11409053 | 11405614 | ID=MsG0480018904.01.T01;Parent=MsG0480018904.01;Name=MsG0480018904.01.T01;_AED=0.41;_eAED=0.41;_QI=66|1|1|1|1|1|2|241|220 |
| Chr4 | exon | 11405614 | 11406003 | 11405614 | ID=MsG0480018904.01.T01:exon:7144;Parent=MsG0480018904.01.T01 |
| Chr4 | exon | 11408474 | 11409053 | 11408474 | ID=MsG0480018904.01.T01:exon:7145;Parent=MsG0480018904.01.T01 |
| Chr4 | five_prime_UTR | 11405614 | 11405679 | 11405614 | ID=MsG0480018904.01.T01:five_prime_utr;Parent=MsG0480018904.01.T01 |
| Chr4 | CDS | 11405680 | 11406003 | 11405680 | ID=MsG0480018904.01.T01:cds;Parent=MsG0480018904.01.T01 |
| Chr4 | CDS | 11408474 | 11408812 | 11408474 | ID=MsG0480018904.01.T01:cds;Parent=MsG0480018904.01.T01 |
| Chr4 | three_prime_UTR | 11408813 | 11409053 | 11408813 | ID=MsG0480018904.01.T01:three_prime_utr;Parent=MsG0480018904.01.T01 |
| Gene Sequence |
| Protein sequence |
