Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480022274.01.T01 | XP_003612634.1 | 97.482 | 278 | 7 | 0 | 1 | 278 | 1 | 278 | 0 | 559 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480022274.01.T01 | Q6NS09 | 29.126 | 206 | 138 | 4 | 1 | 204 | 1 | 200 | 1.37E-15 | 78.2 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480022274.01.T01 | G7K852 | 97.482 | 278 | 7 | 0 | 1 | 278 | 1 | 278 | 0.0 | 559 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0080048035.01 | MsG0480022274.01 | 0.812686 | 3.742214e-51 | 2.395011e-48 |
MsG0180000222.01 | MsG0480022274.01 | 0.813478 | 2.508392e-51 | 1.639918e-48 |
MsG0180000267.01 | MsG0480022274.01 | 0.801251 | 9.831808e-49 | 4.673349e-46 |
MsG0180000550.01 | MsG0480022274.01 | 0.806601 | 7.598884e-50 | 4.141647e-47 |
MsG0180000567.01 | MsG0480022274.01 | 0.801895 | 7.254604e-49 | 3.505048e-46 |
MsG0180000669.01 | MsG0480022274.01 | 0.804728 | 1.879491e-49 | 9.764110e-47 |
MsG0180000673.01 | MsG0480022274.01 | 0.857884 | 1.203936e-62 | 3.016041e-59 |
MsG0180001043.01 | MsG0480022274.01 | 0.868744 | 5.201045e-66 | 1.902673e-62 |
MsG0180001355.01 | MsG0480022274.01 | 0.812082 | 5.070578e-51 | 3.193119e-48 |
MsG0180001551.01 | MsG0480022274.01 | 0.808713 | 2.705819e-50 | 1.558164e-47 |
MsG0180001795.01 | MsG0480022274.01 | 0.836211 | 1.069090e-56 | 1.338351e-53 |
MsG0180001921.01 | MsG0480022274.01 | 0.866151 | 3.516307e-65 | 1.173220e-61 |
MsG0180002491.01 | MsG0480022274.01 | 0.828481 | 8.777157e-55 | 8.735300e-52 |
MsG0180002912.01 | MsG0480022274.01 | 0.863017 | 3.359935e-64 | 1.003883e-60 |
MsG0180003088.01 | MsG0480022274.01 | 0.878415 | 2.861438e-69 | 1.492927e-65 |
MsG0180003409.01 | MsG0480022274.01 | 0.802361 | 5.819887e-49 | 2.845387e-46 |
MsG0180003590.01 | MsG0480022274.01 | 0.856680 | 2.730552e-62 | 6.568734e-59 |
MsG0180003690.01 | MsG0480022274.01 | 0.809691 | 1.669919e-50 | 9.870855e-48 |
MsG0180004079.01 | MsG0480022274.01 | 0.811293 | 7.525998e-51 | 4.640636e-48 |
MsG0180004110.01 | MsG0480022274.01 | 0.844972 | 5.428823e-59 | 8.913655e-56 |
MsG0180004111.01 | MsG0480022274.01 | 0.803729 | 3.033973e-49 | 1.536093e-46 |
MsG0180004162.01 | MsG0480022274.01 | 0.807373 | 5.216996e-50 | 2.900841e-47 |
MsG0180004201.01 | MsG0480022274.01 | 0.815854 | 7.466556e-52 | 5.206614e-49 |
MsG0180004325.01 | MsG0480022274.01 | 0.816652 | 4.952316e-52 | 3.529838e-49 |
MsG0180004388.01 | MsG0480022274.01 | 0.825587 | 4.320905e-54 | 3.955214e-51 |
MsG0180004867.01 | MsG0480022274.01 | 0.825814 | 3.817303e-54 | 3.517049e-51 |
MsG0180004886.01 | MsG0480022274.01 | -0.805568 | 1.253387e-49 | 6.653169e-47 |
MsG0180005125.01 | MsG0480022274.01 | 0.843850 | 1.087040e-58 | 1.723069e-55 |
MsG0180005172.01 | MsG0480022274.01 | 0.812939 | 3.294083e-51 | 2.122179e-48 |
MsG0180005872.01 | MsG0480022274.01 | 0.833730 | 4.509131e-56 | 5.238218e-53 |
MsG0180005878.01 | MsG0480022274.01 | 0.812503 | 4.102540e-51 | 2.612995e-48 |
MsG0180006012.01 | MsG0480022274.01 | 0.822188 | 2.708026e-53 | 2.250344e-50 |
MsG0180006016.01 | MsG0480022274.01 | 0.865333 | 6.372944e-65 | 2.065575e-61 |
MsG0180006047.01 | MsG0480022274.01 | 0.802263 | 6.095542e-49 | 2.972626e-46 |
MsG0180006069.01 | MsG0480022274.01 | 0.859379 | 4.309047e-63 | 1.135839e-59 |
MsG0180006226.01 | MsG0480022274.01 | -0.804932 | 1.703271e-49 | 8.895431e-47 |
MsG0280006356.01 | MsG0480022274.01 | 0.817382 | 3.394474e-52 | 2.468375e-49 |
MsG0280006411.01 | MsG0480022274.01 | 0.800259 | 1.567228e-48 | 7.264409e-46 |
MsG0280010739.01 | MsG0480022274.01 | 0.854392 | 1.269056e-61 | 2.829812e-58 |
MsG0280011053.01 | MsG0480022274.01 | 0.811204 | 7.870867e-51 | 4.842018e-48 |
MsG0280011120.01 | MsG0480022274.01 | -0.812694 | 3.725984e-51 | 2.385143e-48 |
MsG0280011152.01 | MsG0480022274.01 | 0.806002 | 1.016101e-49 | 5.454490e-47 |
MsG0280011235.01 | MsG0480022274.01 | 0.813511 | 2.467237e-51 | 1.614425e-48 |
MsG0280011446.01 | MsG0480022274.01 | 0.843008 | 1.824862e-58 | 2.816326e-55 |
MsG0380011754.01 | MsG0480022274.01 | 0.850170 | 2.019438e-60 | 3.921174e-57 |
MsG0380013047.01 | MsG0480022274.01 | 0.831635 | 1.492599e-55 | 1.629239e-52 |
MsG0380013184.01 | MsG0480022274.01 | 0.810126 | 1.345573e-50 | 8.044787e-48 |
MsG0380013541.01 | MsG0480022274.01 | 0.809020 | 2.325762e-50 | 1.350309e-47 |
MsG0380014561.01 | MsG0480022274.01 | 0.823166 | 1.603665e-53 | 1.370232e-50 |
MsG0380014680.01 | MsG0480022274.01 | 0.839689 | 1.363475e-57 | 1.897358e-54 |
MsG0380014920.01 | MsG0480022274.01 | 0.804919 | 1.714146e-49 | 8.949456e-47 |
MsG0480018571.01 | MsG0480022274.01 | 0.841426 | 4.786870e-58 | 7.031418e-55 |
MsG0480018635.01 | MsG0480022274.01 | 0.802945 | 4.409382e-49 | 2.187933e-46 |
MsG0480018904.01 | MsG0480022274.01 | 0.867241 | 1.582076e-65 | 5.485035e-62 |
MsG0480018970.01 | MsG0480022274.01 | 0.840406 | 8.864771e-58 | 1.261516e-54 |
MsG0480018998.01 | MsG0480022274.01 | 0.836918 | 7.061904e-57 | 9.028515e-54 |
MsG0480019038.01 | MsG0480022274.01 | 0.828445 | 8.957508e-55 | 8.905418e-52 |
MsG0480019816.01 | MsG0480022274.01 | 0.807868 | 4.096881e-50 | 2.307478e-47 |
MsG0480019880.01 | MsG0480022274.01 | 0.811162 | 8.036406e-51 | 4.938385e-48 |
MsG0480020065.01 | MsG0480022274.01 | 0.809504 | 1.831214e-50 | 1.077042e-47 |
MsG0480020090.01 | MsG0480022274.01 | 0.822917 | 1.832203e-53 | 1.554618e-50 |
MsG0480020372.01 | MsG0480022274.01 | 0.820597 | 6.306454e-53 | 5.011539e-50 |
MsG0480020429.01 | MsG0480022274.01 | 0.800429 | 1.447580e-48 | 6.738918e-46 |
MsG0480020444.01 | MsG0480022274.01 | 0.860668 | 1.759175e-63 | 4.847105e-60 |
MsG0480020445.01 | MsG0480022274.01 | 0.869194 | 3.716536e-66 | 1.382607e-62 |
MsG0480021034.01 | MsG0480022274.01 | 0.803954 | 2.724386e-49 | 1.387410e-46 |
MsG0480021731.01 | MsG0480022274.01 | 0.860718 | 1.698694e-63 | 4.688535e-60 |
MsG0480021883.01 | MsG0480022274.01 | 0.829061 | 6.354024e-55 | 6.431079e-52 |
MsG0480022152.01 | MsG0480022274.01 | 0.800768 | 1.234339e-48 | 5.795536e-46 |
MsG0480022183.01 | MsG0480022274.01 | 0.804055 | 2.596089e-49 | 1.325491e-46 |
MsG0480022274.01 | MsG0480022479.01 | 0.822744 | 2.011181e-53 | 1.698168e-50 |
MsG0480022274.01 | MsG0480022480.01 | 0.880911 | 3.714986e-70 | 2.132633e-66 |
MsG0480022274.01 | MsG0480022530.01 | 0.810053 | 1.395681e-50 | 8.328478e-48 |
MsG0480022274.01 | MsG0480023088.01 | 0.838124 | 3.465597e-57 | 4.597125e-54 |
MsG0480022274.01 | MsG0480023224.01 | 0.804739 | 1.869276e-49 | 9.714043e-47 |
MsG0480022274.01 | MsG0480023318.01 | 0.849070 | 4.093884e-60 | 7.669807e-57 |
MsG0480022274.01 | MsG0480023417.01 | 0.824483 | 7.877654e-54 | 6.986646e-51 |
MsG0480022274.01 | MsG0480023517.01 | 0.841210 | 5.454816e-58 | 7.957679e-55 |
MsG0480022274.01 | MsG0480023707.01 | 0.801381 | 9.250426e-49 | 4.411280e-46 |
MsG0480022274.01 | MsG0480023947.01 | 0.892134 | 2.099675e-74 | 1.894206e-70 |
MsG0480022274.01 | MsG0580024073.01 | 0.844584 | 6.904377e-59 | 1.119824e-55 |
MsG0480022274.01 | MsG0580024114.01 | 0.806980 | 6.318919e-50 | 3.477912e-47 |
MsG0480022274.01 | MsG0580024137.01 | 0.839095 | 1.945348e-57 | 2.658358e-54 |
MsG0480022274.01 | MsG0580024204.01 | 0.848876 | 4.634132e-60 | 8.626582e-57 |
MsG0480022274.01 | MsG0580024407.01 | 0.806113 | 9.632732e-50 | 5.185163e-47 |
MsG0480022274.01 | MsG0580024458.01 | -0.818534 | 1.864419e-52 | 1.399317e-49 |
MsG0480022274.01 | MsG0580024476.01 | 0.846553 | 2.020165e-59 | 3.490132e-56 |
MsG0480022274.01 | MsG0580024575.01 | 0.875123 | 3.949476e-68 | 1.823268e-64 |
MsG0480022274.01 | MsG0580025115.01 | 0.812388 | 4.347994e-51 | 2.760882e-48 |
MsG0480022274.01 | MsG0580025134.01 | 0.852514 | 4.391501e-61 | 9.198521e-58 |
MsG0480022274.01 | MsG0580025143.01 | 0.845297 | 4.434863e-59 | 7.357249e-56 |
MsG0480022274.01 | MsG0580026212.01 | 0.808101 | 3.654181e-50 | 2.070924e-47 |
MsG0480022274.01 | MsG0580027034.01 | 0.834728 | 2.534120e-56 | 3.033014e-53 |
MsG0480022274.01 | MsG0580027129.01 | 0.830827 | 2.358876e-55 | 2.513951e-52 |
MsG0480022274.01 | MsG0580027345.01 | 0.878242 | 3.289635e-69 | 1.705302e-65 |
MsG0480022274.01 | MsG0580027847.01 | 0.801546 | 8.554667e-49 | 4.096510e-46 |
MsG0480022274.01 | MsG0580028185.01 | 0.855835 | 4.830754e-62 | 1.130107e-58 |
MsG0480022274.01 | MsG0580028355.01 | 0.821725 | 3.466195e-53 | 2.842770e-50 |
MsG0480022274.01 | MsG0580029583.01 | 0.826648 | 2.417624e-54 | 2.280829e-51 |
MsG0480022274.01 | MsG0580029668.01 | -0.817556 | 3.101854e-52 | 2.266228e-49 |
MsG0480022274.01 | MsG0580029691.01 | 0.807420 | 5.099583e-50 | 2.839091e-47 |
MsG0480022274.01 | MsG0580029758.01 | 0.824119 | 9.590548e-54 | 8.417932e-51 |
MsG0480022274.01 | MsG0580029767.01 | 0.804278 | 2.332358e-49 | 1.197625e-46 |
MsG0480022274.01 | MsG0580029930.01 | 0.802162 | 6.395711e-49 | 3.110958e-46 |
MsG0480022274.01 | MsG0580029960.01 | 0.820650 | 6.131627e-53 | 4.879830e-50 |
MsG0480022274.01 | MsG0580030235.01 | 0.812620 | 3.868103e-51 | 2.471243e-48 |
MsG0480022274.01 | MsG0680031538.01 | 0.810094 | 1.367186e-50 | 8.167262e-48 |
MsG0480022274.01 | MsG0680032430.01 | 0.812875 | 3.401499e-51 | 2.187687e-48 |
MsG0480022274.01 | MsG0680034450.01 | 0.833733 | 4.502263e-56 | 5.230615e-53 |
MsG0480022274.01 | MsG0680035582.01 | 0.846682 | 1.863663e-59 | 3.233433e-56 |
MsG0480022274.01 | MsG0680035777.01 | 0.844214 | 8.682454e-59 | 1.391975e-55 |
MsG0480022274.01 | MsG0780036291.01 | 0.801986 | 6.948810e-49 | 3.364854e-46 |
MsG0480022274.01 | MsG0780036550.01 | 0.804273 | 2.338556e-49 | 1.200618e-46 |
MsG0480022274.01 | MsG0780037109.01 | 0.807510 | 4.880165e-50 | 2.723344e-47 |
MsG0480022274.01 | MsG0780037258.01 | 0.818868 | 1.565492e-52 | 1.185873e-49 |
MsG0480022274.01 | MsG0780037415.01 | 0.800244 | 1.578366e-48 | 7.313179e-46 |
MsG0480022274.01 | MsG0780037599.01 | 0.831529 | 1.585316e-55 | 1.725082e-52 |
MsG0480022274.01 | MsG0780037895.01 | 0.826195 | 3.100087e-54 | 2.887281e-51 |
MsG0480022274.01 | MsG0780038135.01 | 0.816779 | 4.638090e-52 | 3.317319e-49 |
MsG0480022274.01 | MsG0780038444.01 | 0.859876 | 3.054290e-63 | 8.189889e-60 |
MsG0480022274.01 | MsG0780038495.01 | 0.875907 | 2.128242e-68 | 1.011619e-64 |
MsG0480022274.01 | MsG0780038515.01 | 0.810798 | 9.634829e-51 | 5.863925e-48 |
MsG0480022274.01 | MsG0780038749.01 | 0.811939 | 5.446186e-51 | 3.416237e-48 |
MsG0480022274.01 | MsG0780038921.01 | 0.819334 | 1.226857e-52 | 9.412563e-50 |
MsG0480022274.01 | MsG0780039450.01 | 0.809074 | 2.264482e-50 | 1.316699e-47 |
MsG0480022274.01 | MsG0780039452.01 | 0.808388 | 3.173408e-50 | 1.812199e-47 |
MsG0480022274.01 | MsG0780039472.01 | 0.823385 | 1.425390e-53 | 1.225335e-50 |
MsG0480022274.01 | MsG0780039841.01 | 0.862015 | 6.831917e-64 | 1.971185e-60 |
MsG0480022274.01 | MsG0780039985.01 | 0.815285 | 1.000037e-51 | 6.865920e-49 |
MsG0480022274.01 | MsG0780040143.01 | 0.801111 | 1.050296e-48 | 4.974774e-46 |
MsG0480022274.01 | MsG0780040280.01 | 0.834035 | 3.783148e-56 | 4.435521e-53 |
MsG0480022274.01 | MsG0780040360.01 | 0.814161 | 1.773700e-51 | 1.181218e-48 |
MsG0480022274.01 | MsG0780040442.01 | 0.866480 | 2.764569e-65 | 9.331457e-62 |
MsG0480022274.01 | MsG0780040713.01 | 0.840049 | 1.098952e-57 | 1.546834e-54 |
MsG0480022274.01 | MsG0780040749.01 | 0.800947 | 1.134453e-48 | 5.351268e-46 |
MsG0480022274.01 | MsG0780040861.01 | 0.830977 | 2.166384e-55 | 2.319034e-52 |
MsG0480022274.01 | MsG0780041357.01 | 0.839240 | 1.783720e-57 | 2.448351e-54 |
MsG0480022274.01 | MsG0780041399.01 | 0.803356 | 3.625795e-49 | 1.818104e-46 |
MsG0480022274.01 | MsG0880041985.01 | 0.852037 | 6.002272e-61 | 1.238274e-57 |
MsG0480022274.01 | MsG0880042232.01 | 0.801974 | 6.989753e-49 | 3.383489e-46 |
MsG0480022274.01 | MsG0880042294.01 | 0.826793 | 2.231984e-54 | 2.114484e-51 |
MsG0480022274.01 | MsG0880042314.01 | 0.815708 | 8.050830e-52 | 5.592109e-49 |
MsG0480022274.01 | MsG0880042368.01 | 0.882287 | 1.182204e-70 | 7.159926e-67 |
MsG0480022274.01 | MsG0880042543.01 | 0.803398 | 3.553550e-49 | 1.783922e-46 |
MsG0480022274.01 | MsG0880042811.01 | 0.800077 | 1.707172e-48 | 7.876499e-46 |
MsG0480022274.01 | MsG0880042843.01 | 0.861073 | 1.325073e-63 | 3.702330e-60 |
MsG0480022274.01 | MsG0880042957.01 | 0.841008 | 6.165010e-58 | 8.937655e-55 |
MsG0480022274.01 | MsG0880042976.01 | 0.843381 | 1.451118e-58 | 2.266552e-55 |
MsG0480022274.01 | MsG0880043002.01 | 0.827885 | 1.221944e-54 | 1.195108e-51 |
MsG0480022274.01 | MsG0880043003.01 | 0.839685 | 1.366938e-57 | 1.901952e-54 |
MsG0480022274.01 | MsG0880043082.01 | 0.834260 | 3.321633e-56 | 3.920990e-53 |
MsG0480022274.01 | MsG0880043246.01 | 0.833103 | 6.463448e-56 | 7.369744e-53 |
MsG0480022274.01 | MsG0880043262.01 | 0.835839 | 1.328392e-56 | 1.644067e-53 |
MsG0480022274.01 | MsG0880043285.01 | 0.839597 | 1.440846e-57 | 1.999455e-54 |
MsG0480022274.01 | MsG0880043291.01 | 0.810655 | 1.034509e-50 | 6.272211e-48 |
MsG0480022274.01 | MsG0880043303.01 | 0.829902 | 3.970173e-55 | 4.119026e-52 |
MsG0480022274.01 | MsG0880043745.01 | 0.871919 | 4.733386e-67 | 1.942593e-63 |
MsG0480022274.01 | MsG0880045106.01 | 0.822405 | 2.410635e-53 | 2.015969e-50 |
MsG0480022274.01 | MsG0880045290.01 | 0.836791 | 7.607177e-57 | 9.689447e-54 |
MsG0480022274.01 | MsG0880046058.01 | 0.859878 | 3.048383e-63 | 8.174757e-60 |
MsG0480022274.01 | MsG0880046088.01 | 0.838958 | 2.110520e-57 | 2.871877e-54 |
MsG0480022274.01 | MsG0880046209.01 | 0.827852 | 1.244334e-54 | 1.215883e-51 |
MsG0480022274.01 | MsG0880046285.01 | 0.822688 | 2.072391e-53 | 1.746992e-50 |
MsG0480022274.01 | MsG0880046328.01 | 0.808082 | 3.688173e-50 | 2.089140e-47 |
MsG0480022274.01 | MsG0880046329.01 | 0.814247 | 1.698119e-51 | 1.133543e-48 |
MsG0480022274.01 | MsG0880046417.01 | 0.815330 | 9.770943e-52 | 6.716681e-49 |
MsG0480022274.01 | MsG0880046467.01 | 0.818252 | 2.160146e-52 | 1.608584e-49 |
MsG0480022274.01 | MsG0880046731.01 | 0.804375 | 2.226484e-49 | 1.146147e-46 |
MsG0480022274.01 | MsG0880046733.01 | 0.843666 | 1.217472e-58 | 1.918690e-55 |
MsG0480022274.01 | MsG0880046753.01 | 0.868188 | 7.858126e-66 | 2.817273e-62 |
MsG0480022274.01 | MsG0880047116.01 | 0.820279 | 7.460134e-53 | 5.876843e-50 |
MsG0480022274.01 | MsG0880047143.01 | 0.850380 | 1.763401e-60 | 3.447536e-57 |
MsG0480022274.01 | MsG0880047375.01 | 0.819315 | 1.238979e-52 | 9.500770e-50 |
MsG0480022274.01 | MsG0880047497.01 | 0.819464 | 1.145854e-52 | 8.824325e-50 |
MsG0480022274.01 | MsG0880047590.01 | 0.809412 | 1.916347e-50 | 1.124423e-47 |
MsG0380015149.01 | MsG0480022274.01 | 0.803436 | 3.489514e-49 | 1.753467e-46 |
MsG0380015181.01 | MsG0480022274.01 | 0.861959 | 7.110645e-64 | 2.047659e-60 |
MsG0380015245.01 | MsG0480022274.01 | 0.871041 | 9.244765e-67 | 3.675563e-63 |
MsG0380015324.01 | MsG0480022274.01 | 0.805459 | 1.321500e-49 | 6.995353e-47 |
MsG0380015404.01 | MsG0480022274.01 | 0.813799 | 2.131982e-51 | 1.405953e-48 |
MsG0380015770.01 | MsG0480022274.01 | 0.813290 | 2.758333e-51 | 1.794044e-48 |
MsG0380015779.01 | MsG0480022274.01 | 0.845100 | 5.013852e-59 | 8.265326e-56 |
MsG0380015931.01 | MsG0480022274.01 | 0.817189 | 3.750857e-52 | 2.712940e-49 |
MsG0380016427.01 | MsG0480022274.01 | 0.808791 | 2.603775e-50 | 1.502513e-47 |
MsG0380017101.01 | MsG0480022274.01 | 0.853323 | 2.578796e-61 | 5.550658e-58 |
MsG0380017135.01 | MsG0480022274.01 | -0.837946 | 3.850005e-57 | 5.080032e-54 |
MsG0380017226.01 | MsG0480022274.01 | 0.813336 | 2.695202e-51 | 1.755210e-48 |
MsG0380017286.01 | MsG0480022274.01 | 0.893186 | 7.948177e-75 | 7.496378e-71 |
MsG0380017403.01 | MsG0480022274.01 | 0.821348 | 4.234945e-53 | 3.436801e-50 |
MsG0380017680.01 | MsG0480022274.01 | 0.811719 | 6.082385e-51 | 3.793069e-48 |
MsG0380017998.01 | MsG0480022274.01 | 0.800345 | 1.505119e-48 | 6.991997e-46 |
MsG0380018009.01 | MsG0480022274.01 | 0.832394 | 9.695259e-56 | 1.082256e-52 |
MsG0480018126.01 | MsG0480022274.01 | 0.803684 | 3.099185e-49 | 1.567264e-46 |
MsG0480018160.01 | MsG0480022274.01 | 0.813514 | 2.462521e-51 | 1.611494e-48 |
MsG0480018333.01 | MsG0480022274.01 | 0.843787 | 1.130512e-58 | 1.788149e-55 |
MsG0280006475.01 | MsG0480022274.01 | -0.825568 | 4.366655e-54 | 3.994849e-51 |
MsG0280006581.01 | MsG0480022274.01 | 0.826938 | 2.060593e-54 | 1.960511e-51 |
MsG0280006595.01 | MsG0480022274.01 | 0.839619 | 1.421769e-57 | 1.974304e-54 |
MsG0280006708.01 | MsG0480022274.01 | 0.815603 | 8.493048e-52 | 5.882480e-49 |
MsG0280007133.01 | MsG0480022274.01 | -0.801036 | 1.088031e-48 | 5.143981e-46 |
MsG0280007253.01 | MsG0480022274.01 | 0.831663 | 1.469673e-55 | 1.605571e-52 |
MsG0280007258.01 | MsG0480022274.01 | 0.800196 | 1.614690e-48 | 7.472120e-46 |
MsG0280007272.01 | MsG0480022274.01 | 0.831724 | 1.419629e-55 | 1.553886e-52 |
MsG0280007369.01 | MsG0480022274.01 | 0.836241 | 1.050249e-56 | 1.315950e-53 |
MsG0280007549.01 | MsG0480022274.01 | 0.807276 | 5.469872e-50 | 3.033910e-47 |
MsG0280007607.01 | MsG0480022274.01 | 0.842848 | 2.011976e-58 | 3.089823e-55 |
MsG0280007609.01 | MsG0480022274.01 | 0.831727 | 1.417045e-55 | 1.551204e-52 |
MsG0280007610.01 | MsG0480022274.01 | 0.821489 | 3.929691e-53 | 3.201540e-50 |
MsG0280007715.01 | MsG0480022274.01 | 0.802797 | 4.730645e-49 | 2.338689e-46 |
MsG0280008286.01 | MsG0480022274.01 | 0.808373 | 3.198143e-50 | 1.825548e-47 |
MsG0280009235.01 | MsG0480022274.01 | 0.835835 | 1.331325e-56 | 1.647501e-53 |
MsG0280009858.01 | MsG0480022274.01 | 0.830466 | 2.890742e-55 | 3.047865e-52 |
MsG0280010354.01 | MsG0480022274.01 | 0.821602 | 3.701187e-53 | 3.024797e-50 |
MsG0280010389.01 | MsG0480022274.01 | 0.817278 | 3.582269e-52 | 2.597267e-49 |
MsG0280010391.01 | MsG0480022274.01 | 0.830723 | 2.501315e-55 | 2.657588e-52 |
MsG0280010416.01 | MsG0480022274.01 | 0.835430 | 1.685659e-56 | 2.060818e-53 |
MsG0280010493.01 | MsG0480022274.01 | -0.807410 | 5.124782e-50 | 2.852410e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480022274.01.T01 | MTR_5g027180 | 97.482 | 278 | 7 | 0 | 1 | 278 | 1 | 278 | 0.0 | 559 |
MsG0480022274.01.T01 | MTR_8g071150 | 72.348 | 264 | 73 | 0 | 1 | 264 | 1 | 264 | 2.78e-146 | 411 |
MsG0480022274.01.T01 | MTR_8g071140 | 63.745 | 251 | 91 | 0 | 14 | 264 | 111 | 361 | 4.71e-118 | 343 |
MsG0480022274.01.T01 | MTR_4g068340 | 31.008 | 258 | 159 | 5 | 1 | 247 | 1 | 250 | 3.18e-32 | 120 |
MsG0480022274.01.T01 | MTR_2g021690 | 26.740 | 273 | 188 | 5 | 1 | 266 | 1 | 268 | 1.53e-31 | 119 |
MsG0480022274.01.T01 | MTR_1g112160 | 29.612 | 206 | 133 | 5 | 83 | 276 | 27 | 232 | 2.40e-23 | 95.9 |
MsG0480022274.01.T01 | MTR_1g112150 | 26.460 | 291 | 192 | 7 | 1 | 278 | 1 | 282 | 1.80e-22 | 94.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480022274.01.T01 | AT1G32127 | 74.242 | 264 | 68 | 0 | 1 | 264 | 1 | 264 | 1.87e-146 | 411 |
MsG0480022274.01.T01 | AT1G32127 | 74.242 | 264 | 68 | 0 | 1 | 264 | 1 | 264 | 1.87e-146 | 411 |
MsG0480022274.01.T01 | AT1G55240 | 32.302 | 291 | 180 | 7 | 1 | 278 | 1 | 287 | 2.14e-45 | 155 |
MsG0480022274.01.T01 | AT1G55230 | 28.322 | 286 | 192 | 6 | 1 | 277 | 1 | 282 | 6.60e-40 | 140 |
MsG0480022274.01.T01 | AT5G19870 | 29.643 | 280 | 181 | 9 | 1 | 270 | 1 | 274 | 2.85e-34 | 125 |
MsG0480022274.01.T01 | AT1G49470 | 32.210 | 267 | 155 | 7 | 1 | 251 | 1 | 257 | 5.68e-32 | 120 |
Find 84 sgRNAs with CRISPR-Local
Find 206 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGAAGTAGGGTATGCTATTT+TGG | 0.185525 | 4:+70512927 | MsG0480022274.01.T01:exon |
TAGTTGGGGTGTGGCATATT+TGG | 0.191911 | 4:+70510475 | MsG0480022274.01.T01:CDS |
CTTCTTATGTTCTTTATCTA+TGG | 0.197883 | 4:+70510723 | MsG0480022274.01.T01:CDS |
TAATGATTTGCATACAATTC+AGG | 0.249628 | 4:+70512887 | MsG0480022274.01.T01:CDS |
ATAAAATGCATAGTCCTATT+TGG | 0.267816 | 4:-70512572 | None:intergenic |
TATACTAATATATACCCTTT+TGG | 0.272821 | 4:+70509381 | MsG0480022274.01.T01:five_prime_UTR |
TATAGAACATGTCTGTATAT+TGG | 0.287889 | 4:+70513010 | MsG0480022274.01.T01:three_prime_UTR |
ACCAGATGGTTGCAAGATTA+AGG | 0.289473 | 4:+70512716 | MsG0480022274.01.T01:CDS |
GCTCGAACACGAAACGTCTT+AGG | 0.306136 | 4:-70510525 | None:intergenic |
TTCATATAGAGGGTATCTTT+TGG | 0.307108 | 4:+70510317 | MsG0480022274.01.T01:five_prime_UTR |
AGTTGGGGTGTGGCATATTT+GGG | 0.310805 | 4:+70510476 | MsG0480022274.01.T01:CDS |
TTGCAACCATCTGGTATCAT+AGG | 0.312702 | 4:-70512708 | None:intergenic |
TTTCAAGGGTCATGCTTTGC+CGG | 0.328389 | 4:+70510437 | MsG0480022274.01.T01:CDS |
ACCCTCCTCGTCTTCCAAAT+AGG | 0.366655 | 4:+70512558 | MsG0480022274.01.T01:CDS |
GTCTGTATATTGGAGTTAAA+AGG | 0.367686 | 4:+70513020 | MsG0480022274.01.T01:three_prime_UTR |
AAATCGGCTGGAAAGTTGTT+TGG | 0.368226 | 4:-70512618 | None:intergenic |
GCTCTTTGTTGCCATCCTTT+CGG | 0.373014 | 4:+70512803 | MsG0480022274.01.T01:CDS |
GAGCTCTATGTTGTTGCAAT+TGG | 0.374652 | 4:+70510591 | MsG0480022274.01.T01:CDS |
CTTTAGCGCTGCAAGGCATA+TGG | 0.378119 | 4:+70512655 | MsG0480022274.01.T01:CDS |
TCCTTAATCTTGCAACCATC+TGG | 0.387259 | 4:-70512717 | None:intergenic |
AGCGATGCCGTTGCATAAAT+CGG | 0.390715 | 4:-70512634 | None:intergenic |
GCAAGTGGTGTAGAAGGAAT+AGG | 0.399248 | 4:+70513084 | MsG0480022274.01.T01:three_prime_UTR |
TGATGGGAGGCTAAAATACT+TGG | 0.399410 | 4:+70510569 | MsG0480022274.01.T01:CDS |
GCCATCCTTTCGGTTCTTGT+TGG | 0.409177 | 4:+70512813 | MsG0480022274.01.T01:CDS |
TTTCATTCAACATCACATAA+AGG | 0.423117 | 4:+70512516 | MsG0480022274.01.T01:CDS |
AAAATATAGTATATTGAGAT+TGG | 0.435738 | 4:+70509298 | None:intergenic |
TTCAAGGGTCATGCTTTGCC+GGG | 0.438314 | 4:+70510438 | MsG0480022274.01.T01:CDS |
TTACTTACAATAGTAGTGAT+TGG | 0.439089 | 4:-70509576 | None:intergenic |
TAATGGTATGTGAAATGAAA+AGG | 0.439141 | 4:-70509438 | None:intergenic |
CTGGAAAGTTGTTTGGAAGA+AGG | 0.447000 | 4:-70512611 | None:intergenic |
TAGTGATTGAATTGCCCAAA+AGG | 0.450565 | 4:-70509396 | None:intergenic |
GATTAGATCAAAACTGAAGT+AGG | 0.452967 | 4:+70512913 | MsG0480022274.01.T01:exon |
TACAGCTAAGAAATCATTCA+AGG | 0.464409 | 4:+70510359 | MsG0480022274.01.T01:five_prime_UTR |
ATTGGTATAGGTTCATATAG+AGG | 0.464798 | 4:+70510306 | MsG0480022274.01.T01:intron |
AAAAGGGTATATATTAGTAT+AGG | 0.467520 | 4:-70509379 | None:intergenic |
ACTCACCTCAAGATAATTGT+TGG | 0.467738 | 4:+70510651 | MsG0480022274.01.T01:CDS |
TGGAAAGTTGTTTGGAAGAA+GGG | 0.490039 | 4:-70512610 | None:intergenic |
CGGAAAATGCCATGGCAGCT+AGG | 0.498795 | 4:-70512473 | None:intergenic |
AATGGTATGTGAAATGAAAA+GGG | 0.505652 | 4:-70509437 | None:intergenic |
TTGATTTAATTACAAGAGAG+TGG | 0.505741 | 4:+70510388 | MsG0480022274.01.T01:five_prime_UTR |
ATGAATGACTTTGAGCACTC+GGG | 0.516066 | 4:+70510696 | MsG0480022274.01.T01:CDS |
ATGCCGTTGCATAAATCGGC+TGG | 0.516097 | 4:-70512630 | None:intergenic |
AGGAAACTTATTCTTTAATG+TGG | 0.516649 | 4:+70513104 | MsG0480022274.01.T01:three_prime_UTR |
CTCCCATCAAAACCCGGTAC+AGG | 0.520728 | 4:-70510555 | None:intergenic |
TTAGTTACACTTGAGTATGT+TGG | 0.525182 | 4:+70512975 | MsG0480022274.01.T01:three_prime_UTR |
CATAAAATACCTTGTTGCAA+TGG | 0.527231 | 4:-70512447 | None:intergenic |
TTTATGTTTCCTAGCTGCCA+TGG | 0.533188 | 4:+70512464 | MsG0480022274.01.T01:CDS |
AGACGTTTCGTGTTCGAGCG+TGG | 0.536426 | 4:+70510529 | MsG0480022274.01.T01:CDS |
AGTGATTGAATTGCCCAAAA+GGG | 0.544057 | 4:-70509395 | None:intergenic |
TTGGTATAGGTTCATATAGA+GGG | 0.545912 | 4:+70510307 | MsG0480022274.01.T01:intron |
TCGAGCGTGGAATCCTGTAC+CGG | 0.548667 | 4:+70510542 | MsG0480022274.01.T01:CDS |
GTTGTTTGGAAGAAGGGCTC+CGG | 0.548724 | 4:-70512604 | None:intergenic |
TATGAATGACTTTGAGCACT+CGG | 0.553153 | 4:+70510695 | MsG0480022274.01.T01:CDS |
TTTGGAAGACGAGGAGGGTG+TGG | 0.553435 | 4:-70512554 | None:intergenic |
TGCAACCATCTGGTATCATA+GGG | 0.554097 | 4:-70512707 | None:intergenic |
TCAGTTGACAGTGAGATTCG+CGG | 0.561893 | 4:+70512759 | MsG0480022274.01.T01:CDS |
ATTTCAATGAATGATTGTGA+AGG | 0.564296 | 4:-70509514 | None:intergenic |
TTTCCAGCCGATTTATGCAA+CGG | 0.568372 | 4:+70512627 | MsG0480022274.01.T01:CDS |
GATTTGCATACAATTCAGGA+TGG | 0.570638 | 4:+70512891 | MsG0480022274.01.T01:CDS |
CGAGCGTGGAATCCTGTACC+GGG | 0.573272 | 4:+70510543 | MsG0480022274.01.T01:CDS |
TTTATGTGATGTTGAATGAA+AGG | 0.575760 | 4:-70512514 | None:intergenic |
ATTAGATCAAAACTGAAGTA+GGG | 0.575919 | 4:+70512914 | MsG0480022274.01.T01:exon |
TCAAAGTCATTCATATGAGA+AGG | 0.583114 | 4:-70510687 | None:intergenic |
AAGAACATATTGATTGACAT+AGG | 0.584614 | 4:+70509350 | MsG0480022274.01.T01:five_prime_UTR |
ACCAACAAGAACCGAAAGGA+TGG | 0.586194 | 4:-70512814 | None:intergenic |
CACCTCAAGATAATTGTTGG+TGG | 0.591598 | 4:+70510654 | MsG0480022274.01.T01:CDS |
TATGGCCCTATGATACCAGA+TGG | 0.593823 | 4:+70512702 | MsG0480022274.01.T01:CDS |
AACATCACATAAAGGTCTCG+AGG | 0.601372 | 4:+70512524 | MsG0480022274.01.T01:CDS |
GGCATCGCTTTAGCGCTGCA+AGG | 0.601674 | 4:+70512648 | MsG0480022274.01.T01:CDS |
AAAGGAGAATAGAAGATACT+CGG | 0.605972 | 4:-70512496 | None:intergenic |
TCAAGGGTCATGCTTTGCCG+GGG | 0.619566 | 4:+70510439 | MsG0480022274.01.T01:CDS |
GTCCTATTTGGAAGACGAGG+AGG | 0.619764 | 4:-70512560 | None:intergenic |
TTTAGCCTCCCATCAAAACC+CGG | 0.622539 | 4:-70510561 | None:intergenic |
CACCACCAACAATTATCTTG+AGG | 0.625766 | 4:-70510656 | None:intergenic |
TCCTATTTGGAAGACGAGGA+GGG | 0.627926 | 4:-70512559 | None:intergenic |
AGATTTCTTCCATTGCAACA+AGG | 0.635937 | 4:+70512438 | MsG0480022274.01.T01:intron |
ACAGCTAAGAAATCATTCAA+GGG | 0.636237 | 4:+70510360 | MsG0480022274.01.T01:five_prime_UTR |
ACATCACATAAAGGTCTCGA+GGG | 0.649189 | 4:+70512525 | MsG0480022274.01.T01:CDS |
TGAATGACTTTGAGCACTCG+GGG | 0.653649 | 4:+70510697 | MsG0480022274.01.T01:CDS |
ATACTCGGCGGAAAATGCCA+TGG | 0.666532 | 4:-70512481 | None:intergenic |
GGTATGTGAAATGAAAAGGG+AGG | 0.693658 | 4:-70509434 | None:intergenic |
CAGTACCAACAAGAACCGAA+AGG | 0.694080 | 4:-70512818 | None:intergenic |
ATAGTCCTATTTGGAAGACG+AGG | 0.716043 | 4:-70512563 | None:intergenic |
GGAGAATAGAAGATACTCGG+CGG | 0.725727 | 4:-70512493 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | GTAAATATTATTAAGAAAAA+TGG | + | Chr4:70510410-70510429 | MsG0480022274.01.T01:exon | 10.0% |
!!! | AAAAAGTTAAGATTTTTATA+AGG | - | Chr4:70509708-70509727 | None:intergenic | 10.0% |
!! | CTAATTTATTCTATTTAAAC+AGG | - | Chr4:70510850-70510869 | None:intergenic | 15.0% |
!! | CTGTTTAAATAGAATAAATT+AGG | + | Chr4:70510848-70510867 | MsG0480022274.01.T01:intron | 15.0% |
!! | TTTGATGTTTGAAAATTAAT+TGG | + | Chr4:70510288-70510307 | MsG0480022274.01.T01:intron | 15.0% |
!!! | AACTTTTAGATATGAATAAT+GGG | - | Chr4:70509664-70509683 | None:intergenic | 15.0% |
!! | AAAACAAAAAAGTCAAAACT+TGG | - | Chr4:70509901-70509920 | None:intergenic | 20.0% |
!! | AAACAAAAAAGTCAAAACTT+GGG | - | Chr4:70509900-70509919 | None:intergenic | 20.0% |
!! | AAGTGATTAATTAGTTGATT+AGG | + | Chr4:70510029-70510048 | MsG0480022274.01.T01:intron | 20.0% |
!! | AATCTATGCAAGAAAAAAAA+CGG | - | Chr4:70512423-70512442 | None:intergenic | 20.0% |
!! | ATGAAAATGAAAATGAAAAG+AGG | - | Chr4:70509603-70509622 | None:intergenic | 20.0% |
!! | GTTTGAAAATTAATTGGTAT+AGG | + | Chr4:70510294-70510313 | MsG0480022274.01.T01:intron | 20.0% |
!! | TAGAAATATTCTGTCAAAAA+AGG | + | Chr4:70510259-70510278 | MsG0480022274.01.T01:intron | 20.0% |
!! | TGAAAATGAAAATGAAAAGA+GGG | - | Chr4:70509602-70509621 | None:intergenic | 20.0% |
!! | TTGTCTTATGATTATAGAAA+GGG | - | Chr4:70511330-70511349 | None:intergenic | 20.0% |
!! | TTTGTCTTATGATTATAGAA+AGG | - | Chr4:70511331-70511350 | None:intergenic | 20.0% |
!!! | AAAAGGGTATATATTAGTAT+AGG | - | Chr4:70509382-70509401 | None:intergenic | 20.0% |
!!! | AAAATTTTCATACTTCTCAA+TGG | + | Chr4:70509819-70509838 | MsG0480022274.01.T01:intron | 20.0% |
!!! | ATACTAATATATACCCTTTT+GGG | + | Chr4:70509382-70509401 | MsG0480022274.01.T01:five_prime_UTR | 20.0% |
!!! | CTAATTTTTTCATTTTCCAA+AGG | - | Chr4:70509980-70509999 | None:intergenic | 20.0% |
!!! | GAACTTTTAGATATGAATAA+TGG | - | Chr4:70509665-70509684 | None:intergenic | 20.0% |
!!! | GTTTTGACTTTTTTGTTTTT+TGG | + | Chr4:70509902-70509921 | MsG0480022274.01.T01:intron | 20.0% |
!!! | TAAAAAAACATTTTTTGCAG+CGG | - | Chr4:70511789-70511808 | None:intergenic | 20.0% |
!!! | TATACTAATATATACCCTTT+TGG | + | Chr4:70509381-70509400 | MsG0480022274.01.T01:five_prime_UTR | 20.0% |
!!! | TTCTTTAAAAGTTAATGCAA+GGG | - | Chr4:70512332-70512351 | None:intergenic | 20.0% |
!!! | TTGTTTCTTGAAAAAATTCA+AGG | + | Chr4:70510081-70510100 | MsG0480022274.01.T01:intron | 20.0% |
!!! | TTTTCTCTTATTTGGTTTAA+TGG | - | Chr4:70509458-70509477 | None:intergenic | 20.0% |
!!! | TTTTTATATTTCTTCTCCTT+TGG | + | Chr4:70509961-70509980 | MsG0480022274.01.T01:intron | 20.0% |
! | AACAAAAAAGTCAAAACTTG+GGG | - | Chr4:70509899-70509918 | None:intergenic | 25.0% |
! | AATGGTATGTGAAATGAAAA+GGG | - | Chr4:70509440-70509459 | None:intergenic | 25.0% |
! | ACAAAAAAATCAATGTGAAG+AGG | - | Chr4:70509867-70509886 | None:intergenic | 25.0% |
! | ACCATAAACTTCAAATTTCA+AGG | - | Chr4:70510234-70510253 | None:intergenic | 25.0% |
! | ACTTTCTGATAAAACTCAAA+TGG | - | Chr4:70510148-70510167 | None:intergenic | 25.0% |
! | AGGAAACTTATTCTTTAATG+TGG | + | Chr4:70513104-70513123 | MsG0480022274.01.T01:three_prime_UTR | 25.0% |
! | ATAAAATGCATAGTCCTATT+TGG | - | Chr4:70512575-70512594 | None:intergenic | 25.0% |
! | ATTAGATCAAAACTGAAGTA+GGG | + | Chr4:70512914-70512933 | MsG0480022274.01.T01:exon | 25.0% |
! | ATTCACTTATTACTACTAGA+TGG | + | Chr4:70509769-70509788 | MsG0480022274.01.T01:intron | 25.0% |
! | ATTTCAATGAATGATTGTGA+AGG | - | Chr4:70509517-70509536 | None:intergenic | 25.0% |
! | CAAAAAAATCAATGTGAAGA+GGG | - | Chr4:70509866-70509885 | None:intergenic | 25.0% |
! | CAAATAAGAGAAAAACTTTC+AGG | + | Chr4:70509464-70509483 | MsG0480022274.01.T01:five_prime_UTR | 25.0% |
! | CTTCTTATGTTCTTTATCTA+TGG | + | Chr4:70510723-70510742 | MsG0480022274.01.T01:CDS | 25.0% |
! | GAGAAATAAACTGAATAAGA+AGG | + | Chr4:70512079-70512098 | MsG0480022274.01.T01:intron | 25.0% |
! | TAATGGTATGTGAAATGAAA+AGG | - | Chr4:70509441-70509460 | None:intergenic | 25.0% |
! | TATAGAACATGTCTGTATAT+TGG | + | Chr4:70513010-70513029 | MsG0480022274.01.T01:three_prime_UTR | 25.0% |
! | TCTATGATTAATCATGAGAA+AGG | - | Chr4:70510910-70510929 | None:intergenic | 25.0% |
! | TCTCATGATTAATCATAGAT+AGG | + | Chr4:70510911-70510930 | MsG0480022274.01.T01:intron | 25.0% |
! | TTACTTACAATAGTAGTGAT+TGG | - | Chr4:70509579-70509598 | None:intergenic | 25.0% |
! | TTGATTTAATTACAAGAGAG+TGG | + | Chr4:70510388-70510407 | MsG0480022274.01.T01:five_prime_UTR | 25.0% |
! | TTTATGTGATGTTGAATGAA+AGG | - | Chr4:70512517-70512536 | None:intergenic | 25.0% |
! | TTTCATTCAACATCACATAA+AGG | + | Chr4:70512516-70512535 | MsG0480022274.01.T01:CDS | 25.0% |
!! | AAGAACATATTGATTGACAT+AGG | + | Chr4:70509350-70509369 | MsG0480022274.01.T01:five_prime_UTR | 25.0% |
!! | ATATTAAAACGAAGCTTTAG+TGG | + | Chr4:70511463-70511482 | MsG0480022274.01.T01:intron | 25.0% |
!! | CTGAAAGTTTTTCTCTTATT+TGG | - | Chr4:70509466-70509485 | None:intergenic | 25.0% |
!! | GTTCTTTAAAAGTTAATGCA+AGG | - | Chr4:70512333-70512352 | None:intergenic | 25.0% |
!! | TAATGATTTGCATACAATTC+AGG | + | Chr4:70512887-70512906 | MsG0480022274.01.T01:CDS | 25.0% |
!! | TAATGTATTGATGTTCTAGA+TGG | - | Chr4:70511286-70511305 | None:intergenic | 25.0% |
!! | TAGTTACTTTCAAGTGAAAT+TGG | + | Chr4:70511525-70511544 | MsG0480022274.01.T01:intron | 25.0% |
!! | TCCTTGAAATTTGAAGTTTA+TGG | + | Chr4:70510230-70510249 | MsG0480022274.01.T01:intron | 25.0% |
!!! | AAGGTTTTTTTTGTGTTTGT+GGG | - | Chr4:70509498-70509517 | None:intergenic | 25.0% |
!!! | AATAATGACTTGTTCTAGAT+AGG | + | Chr4:70511078-70511097 | MsG0480022274.01.T01:intron | 25.0% |
!!! | ATAATGACTTGTTCTAGATA+GGG | + | Chr4:70511079-70511098 | MsG0480022274.01.T01:intron | 25.0% |
!!! | TAGATCCTTTTTTTTCTTTC+CGG | + | Chr4:70511169-70511188 | MsG0480022274.01.T01:intron | 25.0% |
!!! | TTGCATAGTTTTGAATTTCA+GGG | + | Chr4:70511140-70511159 | MsG0480022274.01.T01:intron | 25.0% |
AAAGGAGAATAGAAGATACT+CGG | - | Chr4:70512499-70512518 | None:intergenic | 30.0% | |
AAATTCAAGGACACTATTAC+TGG | + | Chr4:70510094-70510113 | MsG0480022274.01.T01:intron | 30.0% | |
AACACATCTTACTTGAGTAT+TGG | - | Chr4:70510941-70510960 | None:intergenic | 30.0% | |
AAGAAAAATGGGATCTTTCA+AGG | + | Chr4:70510422-70510441 | MsG0480022274.01.T01:exon | 30.0% | |
ACAAAAAAGTCAAAACTTGG+GGG | - | Chr4:70509898-70509917 | None:intergenic | 30.0% | |
ACAGCTAAGAAATCATTCAA+GGG | + | Chr4:70510360-70510379 | MsG0480022274.01.T01:five_prime_UTR | 30.0% | |
AGAAAAATGGGATCTTTCAA+GGG | + | Chr4:70510423-70510442 | MsG0480022274.01.T01:exon | 30.0% | |
AGTTTCCGGAAAGAAAAAAA+AGG | - | Chr4:70511177-70511196 | None:intergenic | 30.0% | |
ATAAACTGAATAAGAAGGCA+AGG | + | Chr4:70512084-70512103 | MsG0480022274.01.T01:intron | 30.0% | |
ATAATACAGTAGACGATACA+AGG | - | Chr4:70511891-70511910 | None:intergenic | 30.0% | |
ATTGGTATAGGTTCATATAG+AGG | + | Chr4:70510306-70510325 | MsG0480022274.01.T01:intron | 30.0% | |
CATAAAATACCTTGTTGCAA+TGG | - | Chr4:70512450-70512469 | None:intergenic | 30.0% | |
CTTCAAATTTATGCATTGCA+AGG | + | Chr4:70512209-70512228 | MsG0480022274.01.T01:intron | 30.0% | |
GAAAGGGAGTGAATAAAATT+AGG | - | Chr4:70511314-70511333 | None:intergenic | 30.0% | |
GATTAGATCAAAACTGAAGT+AGG | + | Chr4:70512913-70512932 | MsG0480022274.01.T01:exon | 30.0% | |
GTCTGTATATTGGAGTTAAA+AGG | + | Chr4:70513020-70513039 | MsG0480022274.01.T01:three_prime_UTR | 30.0% | |
TACAGCTAAGAAATCATTCA+AGG | + | Chr4:70510359-70510378 | MsG0480022274.01.T01:five_prime_UTR | 30.0% | |
TCAAAGTCATTCATATGAGA+AGG | - | Chr4:70510690-70510709 | None:intergenic | 30.0% | |
TCAAGAACTAACATATCTAG+TGG | - | Chr4:70511864-70511883 | None:intergenic | 30.0% | |
TGTAAATGGTGTATTCTTTG+CGG | + | Chr4:70511953-70511972 | MsG0480022274.01.T01:intron | 30.0% | |
TGTACTAAATAGTGTATCGT+AGG | + | Chr4:70511053-70511072 | MsG0480022274.01.T01:intron | 30.0% | |
TTAGTTACACTTGAGTATGT+TGG | + | Chr4:70512975-70512994 | MsG0480022274.01.T01:three_prime_UTR | 30.0% | |
TTGGTATAGGTTCATATAGA+GGG | + | Chr4:70510307-70510326 | MsG0480022274.01.T01:intron | 30.0% | |
! | AAAATTAGTTGACTGACTCT+AGG | + | Chr4:70509992-70510011 | MsG0480022274.01.T01:intron | 30.0% |
! | GTACTAGCAAAATAACTTGT+AGG | - | Chr4:70511368-70511387 | None:intergenic | 30.0% |
! | GTTTAATTTCCACAGTACAT+CGG | - | Chr4:70511422-70511441 | None:intergenic | 30.0% |
! | TGCATTTTATCTTCAATTGC+CGG | + | Chr4:70512585-70512604 | MsG0480022274.01.T01:CDS | 30.0% |
!! | ACTAGATGGATTAAACTTGT+TGG | + | Chr4:70509783-70509802 | MsG0480022274.01.T01:intron | 30.0% |
!! | AGTTTTGCTACATGATTTGT+GGG | - | Chr4:70511662-70511681 | None:intergenic | 30.0% |
!! | CAAACTGCTTTTGTTCTTTA+TGG | + | Chr4:70512684-70512703 | MsG0480022274.01.T01:CDS | 30.0% |
!! | CTAGATGGATTAAACTTGTT+GGG | + | Chr4:70509784-70509803 | MsG0480022274.01.T01:intron | 30.0% |
!! | TACAAAGTATTGCTGAATAG+TGG | - | Chr4:70511037-70511056 | None:intergenic | 30.0% |
!!! | GAAGGTTTTTTTTGTGTTTG+TGG | - | Chr4:70509499-70509518 | None:intergenic | 30.0% |
!!! | GTTGCATAGTTTTGAATTTC+AGG | + | Chr4:70511139-70511158 | MsG0480022274.01.T01:intron | 30.0% |
!!! | TTCATATAGAGGGTATCTTT+TGG | + | Chr4:70510317-70510336 | MsG0480022274.01.T01:five_prime_UTR | 30.0% |
AAAAAAAACGGAGAGGAGTA+TGG | - | Chr4:70512411-70512430 | None:intergenic | 35.0% | |
AACTATGCAACTGAATTGTG+TGG | + | Chr4:70511193-70511212 | MsG0480022274.01.T01:intron | 35.0% | |
ACTCACCTCAAGATAATTGT+TGG | + | Chr4:70510651-70510670 | MsG0480022274.01.T01:CDS | 35.0% | |
AGAGGGAAATTATAGAAGCA+TGG | - | Chr4:70509849-70509868 | None:intergenic | 35.0% | |
AGATTTCTTCCATTGCAACA+AGG | + | Chr4:70512438-70512457 | MsG0480022274.01.T01:intron | 35.0% | |
AGTGATTGAATTGCCCAAAA+GGG | - | Chr4:70509398-70509417 | None:intergenic | 35.0% | |
ATGCAAGAAAAAAAACGGAG+AGG | - | Chr4:70512418-70512437 | None:intergenic | 35.0% | |
CAATTCAGTTGCATAGTTTC+CGG | - | Chr4:70511191-70511210 | None:intergenic | 35.0% | |
CTTCAAATTTATGCATTGCG+AGG | + | Chr4:70512249-70512268 | MsG0480022274.01.T01:intron | 35.0% | |
GATTTGCATACAATTCAGGA+TGG | + | Chr4:70512891-70512910 | MsG0480022274.01.T01:CDS | 35.0% | |
GTGTGTTTAGTTAAAGATGC+AGG | - | Chr4:70512296-70512315 | None:intergenic | 35.0% | |
TAGTGATTGAATTGCCCAAA+AGG | - | Chr4:70509399-70509418 | None:intergenic | 35.0% | |
TATGAATGACTTTGAGCACT+CGG | + | Chr4:70510695-70510714 | MsG0480022274.01.T01:CDS | 35.0% | |
TGGAAAGTTGTTTGGAAGAA+GGG | - | Chr4:70512613-70512632 | None:intergenic | 35.0% | |
TTGAGAAAGATTGTGTGTGA+AGG | - | Chr4:70509733-70509752 | None:intergenic | 35.0% | |
! | CAAGTAAGATGTGTTCTAGA+CGG | + | Chr4:70510946-70510965 | MsG0480022274.01.T01:intron | 35.0% |
! | GAGTTTTGCTACATGATTTG+TGG | - | Chr4:70511663-70511682 | None:intergenic | 35.0% |
! | GCTTTTTGTGTGACTGTAAA+TGG | + | Chr4:70511939-70511958 | MsG0480022274.01.T01:intron | 35.0% |
!! | GGCTCTAAAAGTTAACATTG+TGG | + | Chr4:70511709-70511728 | MsG0480022274.01.T01:intron | 35.0% |
!! | TGAAGTAGGGTATGCTATTT+TGG | + | Chr4:70512927-70512946 | MsG0480022274.01.T01:exon | 35.0% |
!!! | GACGTTGTTTTTTGTAGTTG+GGG | + | Chr4:70510461-70510480 | MsG0480022274.01.T01:CDS | 35.0% |
!!! | GGACGTTGTTTTTTGTAGTT+GGG | + | Chr4:70510460-70510479 | MsG0480022274.01.T01:CDS | 35.0% |
AAATCGGCTGGAAAGTTGTT+TGG | - | Chr4:70512621-70512640 | None:intergenic | 40.0% | |
AACATCACATAAAGGTCTCG+AGG | + | Chr4:70512524-70512543 | MsG0480022274.01.T01:CDS | 40.0% | |
ACATCACATAAAGGTCTCGA+GGG | + | Chr4:70512525-70512544 | MsG0480022274.01.T01:CDS | 40.0% | |
ACCAGATGGTTGCAAGATTA+AGG | + | Chr4:70512716-70512735 | MsG0480022274.01.T01:CDS | 40.0% | |
ACTACAAAAAACAACGTCCC+CGG | - | Chr4:70510459-70510478 | None:intergenic | 40.0% | |
AGTATTCATGCCTAAACCTG+AGG | - | Chr4:70511263-70511282 | None:intergenic | 40.0% | |
ATAGTCCTATTTGGAAGACG+AGG | - | Chr4:70512566-70512585 | None:intergenic | 40.0% | |
ATGAATGACTTTGAGCACTC+GGG | + | Chr4:70510696-70510715 | MsG0480022274.01.T01:CDS | 40.0% | |
CACCACCAACAATTATCTTG+AGG | - | Chr4:70510659-70510678 | None:intergenic | 40.0% | |
CACCTCAAGATAATTGTTGG+TGG | + | Chr4:70510654-70510673 | MsG0480022274.01.T01:CDS | 40.0% | |
CTCCAATAAGTCCATGTTGT+AGG | + | Chr4:70511680-70511699 | MsG0480022274.01.T01:intron | 40.0% | |
CTCTACTTAGCGAAAAAACC+AGG | + | Chr4:70510754-70510773 | MsG0480022274.01.T01:CDS | 40.0% | |
CTGGAAAGTTGTTTGGAAGA+AGG | - | Chr4:70512614-70512633 | None:intergenic | 40.0% | |
GAGCAATAGATGAACTAACC+TGG | - | Chr4:70510775-70510794 | None:intergenic | 40.0% | |
GAGCTCTATGTTGTTGCAAT+TGG | + | Chr4:70510591-70510610 | MsG0480022274.01.T01:CDS | 40.0% | |
GGTATGTGAAATGAAAAGGG+AGG | - | Chr4:70509437-70509456 | None:intergenic | 40.0% | |
TCCTTAATCTTGCAACCATC+TGG | - | Chr4:70512720-70512739 | None:intergenic | 40.0% | |
TGATGGGAGGCTAAAATACT+TGG | + | Chr4:70510569-70510588 | MsG0480022274.01.T01:CDS | 40.0% | |
TGCAACCATCTGGTATCATA+GGG | - | Chr4:70512710-70512729 | None:intergenic | 40.0% | |
TGCAACTGAATTGTGTGTCA+AGG | - | Chr4:70511125-70511144 | None:intergenic | 40.0% | |
TGCCTACAACATGGACTTAT+TGG | - | Chr4:70511685-70511704 | None:intergenic | 40.0% | |
TTGCAACCATCTGGTATCAT+AGG | - | Chr4:70512711-70512730 | None:intergenic | 40.0% | |
TTTATGTTTCCTAGCTGCCA+TGG | + | Chr4:70512464-70512483 | MsG0480022274.01.T01:CDS | 40.0% | |
! | CTTTTAGCAAGTGGTGTAGA+AGG | + | Chr4:70513078-70513097 | MsG0480022274.01.T01:three_prime_UTR | 40.0% |
! | TTTCCAGCCGATTTATGCAA+CGG | + | Chr4:70512627-70512646 | MsG0480022274.01.T01:CDS | 40.0% |
!! | TCTAGACGGTGTTGTCAATT+GGG | + | Chr4:70510960-70510979 | MsG0480022274.01.T01:intron | 40.0% |
!! | TTCTAGACGGTGTTGTCAAT+TGG | + | Chr4:70510959-70510978 | MsG0480022274.01.T01:intron | 40.0% |
!!! | GGGACGTTGTTTTTTGTAGT+TGG | + | Chr4:70510459-70510478 | MsG0480022274.01.T01:CDS | 40.0% |
!!! | TCCTCGCTGTTTTTGCATAT+GGG | - | Chr4:70509330-70509349 | None:intergenic | 40.0% |
!!! | TGTTTTTTGTAGTTGGGGTG+TGG | + | Chr4:70510466-70510485 | MsG0480022274.01.T01:CDS | 40.0% |
!!! | TTCCTCGCTGTTTTTGCATA+TGG | - | Chr4:70509331-70509350 | None:intergenic | 40.0% |
ACCAACAAGAACCGAAAGGA+TGG | - | Chr4:70512817-70512836 | None:intergenic | 45.0% | |
ACCCATATGCAAAAACAGCG+AGG | + | Chr4:70509326-70509345 | MsG0480022274.01.T01:five_prime_UTR | 45.0% | |
AGCGATGCCGTTGCATAAAT+CGG | - | Chr4:70512637-70512656 | None:intergenic | 45.0% | |
AGTCCATGTTGTAGGCAGTT+TGG | + | Chr4:70511688-70511707 | MsG0480022274.01.T01:intron | 45.0% | |
AGTTGGGGTGTGGCATATTT+GGG | + | Chr4:70510476-70510495 | MsG0480022274.01.T01:CDS | 45.0% | |
ATCGGATGAAATGGATGCGA+AGG | - | Chr4:70511404-70511423 | None:intergenic | 45.0% | |
CAGTACCAACAAGAACCGAA+AGG | - | Chr4:70512821-70512840 | None:intergenic | 45.0% | |
CCACAGTACATCGGATGAAA+TGG | - | Chr4:70511413-70511432 | None:intergenic | 45.0% | |
CCATTTCATCCGATGTACTG+TGG | + | Chr4:70511410-70511429 | MsG0480022274.01.T01:intron | 45.0% | |
CGCTATAGCACTGTGAACAA+CGG | - | Chr4:70511001-70511020 | None:intergenic | 45.0% | |
GCAAGTGGTGTAGAAGGAAT+AGG | + | Chr4:70513084-70513103 | MsG0480022274.01.T01:three_prime_UTR | 45.0% | |
GCTCTTTGTTGCCATCCTTT+CGG | + | Chr4:70512803-70512822 | MsG0480022274.01.T01:CDS | 45.0% | |
GGAGAATAGAAGATACTCGG+CGG | - | Chr4:70512496-70512515 | None:intergenic | 45.0% | |
GGTTGACAATACTCTGACGT+GGG | + | Chr4:70511214-70511233 | MsG0480022274.01.T01:intron | 45.0% | |
TAGTTGGGGTGTGGCATATT+TGG | + | Chr4:70510475-70510494 | MsG0480022274.01.T01:CDS | 45.0% | |
TATGGATGGACCTCAGGTTT+AGG | + | Chr4:70511250-70511269 | MsG0480022274.01.T01:intron | 45.0% | |
TATGGCCCTATGATACCAGA+TGG | + | Chr4:70512702-70512721 | MsG0480022274.01.T01:CDS | 45.0% | |
TCAGTTGACAGTGAGATTCG+CGG | + | Chr4:70512759-70512778 | MsG0480022274.01.T01:CDS | 45.0% | |
TCCTATTTGGAAGACGAGGA+GGG | - | Chr4:70512562-70512581 | None:intergenic | 45.0% | |
TCGGATGAAATGGATGCGAA+GGG | - | Chr4:70511403-70511422 | None:intergenic | 45.0% | |
TGAATGACTTTGAGCACTCG+GGG | + | Chr4:70510697-70510716 | MsG0480022274.01.T01:CDS | 45.0% | |
TGCAGCGGCAACAACAAATA+CGG | - | Chr4:70511774-70511793 | None:intergenic | 45.0% | |
TGGTTGACAATACTCTGACG+TGG | + | Chr4:70511213-70511232 | MsG0480022274.01.T01:intron | 45.0% | |
TTTAGCCTCCCATCAAAACC+CGG | - | Chr4:70510564-70510583 | None:intergenic | 45.0% | |
TTTCAAGGGTCATGCTTTGC+CGG | + | Chr4:70510437-70510456 | MsG0480022274.01.T01:CDS | 45.0% | |
! | GTGCAGTGACTTTTAGCAAG+TGG | + | Chr4:70513069-70513088 | MsG0480022274.01.T01:three_prime_UTR | 45.0% |
!! | AATCCTGTACCGGGTTTTGA+TGG | + | Chr4:70510552-70510571 | MsG0480022274.01.T01:CDS | 45.0% |
!! | ATCCTGTACCGGGTTTTGAT+GGG | + | Chr4:70510553-70510572 | MsG0480022274.01.T01:CDS | 45.0% |
!! | CTAGACGGTGTTGTCAATTG+GGG | + | Chr4:70510961-70510980 | MsG0480022274.01.T01:intron | 45.0% |
!! | TAAATATTATTAAGAAAAAT+GGG | + | Chr4:70510411-70510430 | MsG0480022274.01.T01:exon | 5.0% |
!!! | TTTTTTCTTTTTTTTTTTTT+TGG | - | Chr4:70512030-70512049 | None:intergenic | 5.0% |
ACCCTCCTCGTCTTCCAAAT+AGG | + | Chr4:70512558-70512577 | MsG0480022274.01.T01:CDS | 50.0% | |
ATACTCGGCGGAAAATGCCA+TGG | - | Chr4:70512484-70512503 | None:intergenic | 50.0% | |
ATGCCGTTGCATAAATCGGC+TGG | - | Chr4:70512633-70512652 | None:intergenic | 50.0% | |
CTGTAGTATGGATGGACCTC+AGG | + | Chr4:70511244-70511263 | MsG0480022274.01.T01:intron | 50.0% | |
CTTTAGCGCTGCAAGGCATA+TGG | + | Chr4:70512655-70512674 | MsG0480022274.01.T01:CDS | 50.0% | |
GACCTCCTCTGTAGTATGGA+TGG | + | Chr4:70511236-70511255 | MsG0480022274.01.T01:intron | 50.0% | |
GAGCCAAACTGCCTACAACA+TGG | - | Chr4:70511694-70511713 | None:intergenic | 50.0% | |
GAGGTCCATCCATACTACAG+AGG | - | Chr4:70511244-70511263 | None:intergenic | 50.0% | |
GCCATCCTTTCGGTTCTTGT+TGG | + | Chr4:70512813-70512832 | MsG0480022274.01.T01:CDS | 50.0% | |
GCTCGAACACGAAACGTCTT+AGG | - | Chr4:70510528-70510547 | None:intergenic | 50.0% | |
GTCCATCCATACTACAGAGG+AGG | - | Chr4:70511241-70511260 | None:intergenic | 50.0% | |
GTCCTATTTGGAAGACGAGG+AGG | - | Chr4:70512563-70512582 | None:intergenic | 50.0% | |
GTTGTTTGGAAGAAGGGCTC+CGG | - | Chr4:70512607-70512626 | None:intergenic | 50.0% | |
TTCAAGGGTCATGCTTTGCC+GGG | + | Chr4:70510438-70510457 | MsG0480022274.01.T01:CDS | 50.0% | |
AGACGTTTCGTGTTCGAGCG+TGG | + | Chr4:70510529-70510548 | MsG0480022274.01.T01:CDS | 55.0% | |
CGGAAAATGCCATGGCAGCT+AGG | - | Chr4:70512476-70512495 | None:intergenic | 55.0% | |
CTCCCATCAAAACCCGGTAC+AGG | - | Chr4:70510558-70510577 | None:intergenic | 55.0% | |
GTGGGACCTCCTCTGTAGTA+TGG | + | Chr4:70511232-70511251 | MsG0480022274.01.T01:intron | 55.0% | |
TCAAGGGTCATGCTTTGCCG+GGG | + | Chr4:70510439-70510458 | MsG0480022274.01.T01:CDS | 55.0% | |
TCGAGCGTGGAATCCTGTAC+CGG | + | Chr4:70510542-70510561 | MsG0480022274.01.T01:CDS | 55.0% | |
TTTGGAAGACGAGGAGGGTG+TGG | - | Chr4:70512557-70512576 | None:intergenic | 55.0% | |
!! | CTGTACCGGGTTTTGATGGG+AGG | + | Chr4:70510556-70510575 | MsG0480022274.01.T01:CDS | 55.0% |
CGAGCGTGGAATCCTGTACC+GGG | + | Chr4:70510543-70510562 | MsG0480022274.01.T01:CDS | 60.0% | |
GGCATCGCTTTAGCGCTGCA+AGG | + | Chr4:70512648-70512667 | MsG0480022274.01.T01:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr4 | gene | 70509303 | 70513154 | 70509303 | ID=MsG0480022274.01;Name=MsG0480022274.01 |
Chr4 | mRNA | 70509303 | 70513154 | 70509303 | ID=MsG0480022274.01.T01;Parent=MsG0480022274.01;Name=MsG0480022274.01.T01;_AED=0.48;_eAED=0.48;_QI=401|1|1|1|0.5|0.33|3|225|278 |
Chr4 | exon | 70512440 | 70513154 | 70512440 | ID=MsG0480022274.01.T01:exon:3777;Parent=MsG0480022274.01.T01 |
Chr4 | exon | 70510316 | 70510775 | 70510316 | ID=MsG0480022274.01.T01:exon:3776;Parent=MsG0480022274.01.T01 |
Chr4 | exon | 70509303 | 70509590 | 70509303 | ID=MsG0480022274.01.T01:exon:3775;Parent=MsG0480022274.01.T01 |
Chr4 | five_prime_UTR | 70509303 | 70509590 | 70509303 | ID=MsG0480022274.01.T01:five_prime_utr;Parent=MsG0480022274.01.T01 |
Chr4 | five_prime_UTR | 70510316 | 70510428 | 70510316 | ID=MsG0480022274.01.T01:five_prime_utr;Parent=MsG0480022274.01.T01 |
Chr4 | CDS | 70510429 | 70510775 | 70510429 | ID=MsG0480022274.01.T01:cds;Parent=MsG0480022274.01.T01 |
Chr4 | CDS | 70512440 | 70512929 | 70512440 | ID=MsG0480022274.01.T01:cds;Parent=MsG0480022274.01.T01 |
Chr4 | three_prime_UTR | 70512930 | 70513154 | 70512930 | ID=MsG0480022274.01.T01:three_prime_utr;Parent=MsG0480022274.01.T01 |
Gene Sequence |
Protein sequence |