Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007369.01.T01 | XP_013462871.1 | 74.623 | 398 | 34 | 7 | 6 | 342 | 143 | 534 | 3.52E-166 | 487 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007369.01.T01 | Q9C519 | 44.965 | 427 | 119 | 15 | 6 | 346 | 156 | 552 | 2.79E-82 | 265 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007369.01.T01 | B3U397 | 74.623 | 398 | 34 | 7 | 6 | 342 | 143 | 534 | 1.68e-166 | 487 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048410.01 | MsG0280007369.01 | 0.800102 | 1.687158e-48 | 7.789061e-46 |
| MsG0180000019.01 | MsG0280007369.01 | 0.878247 | 3.278054e-69 | 1.699558e-65 |
| MsG0180000222.01 | MsG0280007369.01 | 0.829625 | 4.636350e-55 | 4.771122e-52 |
| MsG0180000337.01 | MsG0280007369.01 | 0.820023 | 8.538826e-53 | 6.679664e-50 |
| MsG0180001050.01 | MsG0280007369.01 | 0.854349 | 1.306207e-61 | 2.908446e-58 |
| MsG0180001053.01 | MsG0280007369.01 | 0.851586 | 8.060252e-61 | 1.639150e-57 |
| MsG0180003241.01 | MsG0280007369.01 | 0.832707 | 8.106148e-56 | 9.133611e-53 |
| MsG0180004110.01 | MsG0280007369.01 | 0.841231 | 5.387046e-58 | 7.863893e-55 |
| MsG0180004562.01 | MsG0280007369.01 | 0.845922 | 3.002232e-59 | 5.082133e-56 |
| MsG0180004752.01 | MsG0280007369.01 | 0.802364 | 5.811090e-49 | 2.841340e-46 |
| MsG0180004947.01 | MsG0280007369.01 | 0.806788 | 6.938064e-50 | 3.799698e-47 |
| MsG0180005331.01 | MsG0280007369.01 | 0.811691 | 6.166764e-51 | 3.842700e-48 |
| MsG0180005996.01 | MsG0280007369.01 | 0.847036 | 1.490447e-59 | 2.615201e-56 |
| MsG0180006012.01 | MsG0280007369.01 | 0.822951 | 1.799298e-53 | 1.528121e-50 |
| MsG0180006047.01 | MsG0280007369.01 | 0.829312 | 5.524550e-55 | 5.634429e-52 |
| MsG0280006704.01 | MsG0280007369.01 | 0.807984 | 3.869707e-50 | 2.186273e-47 |
| MsG0280007272.01 | MsG0280007369.01 | 0.905114 | 6.043520e-80 | 9.634083e-76 |
| MsG0280007369.01 | MsG0280007391.01 | 0.915672 | 4.458208e-85 | 1.178938e-80 |
| MsG0280007369.01 | MsG0280007751.01 | 0.823540 | 1.311135e-53 | 1.132136e-50 |
| MsG0280007369.01 | MsG0280008747.01 | 0.811694 | 6.160077e-51 | 3.838730e-48 |
| MsG0280007369.01 | MsG0280009394.01 | 0.859535 | 3.868842e-63 | 1.025166e-59 |
| MsG0280007369.01 | MsG0280009838.01 | 0.848797 | 4.874473e-60 | 9.050292e-57 |
| MsG0280007369.01 | MsG0280009859.01 | 0.828920 | 6.874795e-55 | 6.929394e-52 |
| MsG0280007369.01 | MsG0280009899.01 | 0.804743 | 1.866171e-49 | 9.698717e-47 |
| MsG0280007369.01 | MsG0280011041.01 | 0.834031 | 3.791437e-56 | 4.444725e-53 |
| MsG0280007369.01 | MsG0280011042.01 | 0.800060 | 1.720735e-48 | 7.935652e-46 |
| MsG0280007369.01 | MsG0280011053.01 | 0.871296 | 7.616471e-67 | 3.056748e-63 |
| MsG0280007369.01 | MsG0280011152.01 | 0.831798 | 1.360975e-55 | 1.492951e-52 |
| MsG0280007369.01 | MsG0280011350.01 | 0.807426 | 5.085213e-50 | 2.831511e-47 |
| MsG0280007369.01 | MsG0280011473.01 | 0.846639 | 1.914285e-59 | 3.316456e-56 |
| MsG0280007369.01 | MsG0380011613.01 | 0.809551 | 1.789263e-50 | 1.053709e-47 |
| MsG0280007369.01 | MsG0380014920.01 | 0.896836 | 2.515722e-76 | 2.768750e-72 |
| MsG0280007369.01 | MsG0380016644.01 | 0.807571 | 4.737495e-50 | 2.647703e-47 |
| MsG0280007369.01 | MsG0380017020.01 | 0.844004 | 9.887602e-59 | 1.574801e-55 |
| MsG0280007369.01 | MsG0380017101.01 | 0.811150 | 8.084806e-51 | 4.966655e-48 |
| MsG0280007369.01 | MsG0380017158.01 | 0.835588 | 1.537552e-56 | 1.888610e-53 |
| MsG0280007369.01 | MsG0480018500.01 | 0.851118 | 1.092806e-60 | 2.189036e-57 |
| MsG0280007369.01 | MsG0480018904.01 | 0.883080 | 6.068811e-71 | 3.792114e-67 |
| MsG0280007369.01 | MsG0480019295.01 | 0.838005 | 3.718727e-57 | 4.915819e-54 |
| MsG0280007369.01 | MsG0480019880.01 | 0.866735 | 2.293459e-65 | 7.812149e-62 |
| MsG0280007369.01 | MsG0480020219.01 | 0.830052 | 3.648299e-55 | 3.801007e-52 |
| MsG0280007369.01 | MsG0480020428.01 | 0.814179 | 1.757654e-51 | 1.171116e-48 |
| MsG0280007369.01 | MsG0480020444.01 | 0.834142 | 3.556081e-56 | 4.182231e-53 |
| MsG0280007369.01 | MsG0480021642.01 | 0.801011 | 1.100997e-48 | 5.202018e-46 |
| MsG0280007369.01 | MsG0480022125.01 | 0.839049 | 1.998784e-57 | 2.727415e-54 |
| MsG0280007369.01 | MsG0480022152.01 | 0.839589 | 1.447686e-57 | 2.008425e-54 |
| MsG0280007369.01 | MsG0480022274.01 | 0.836241 | 1.050249e-56 | 1.315950e-53 |
| MsG0280007369.01 | MsG0480022507.01 | 0.817613 | 3.012078e-52 | 2.204035e-49 |
| MsG0280007369.01 | MsG0480022508.01 | 0.810228 | 1.279706e-50 | 7.670943e-48 |
| MsG0280007369.01 | MsG0480022607.01 | 0.820682 | 6.028916e-53 | 4.802456e-50 |
| MsG0280007369.01 | MsG0480022760.01 | 0.841222 | 5.417666e-58 | 7.906349e-55 |
| MsG0280007369.01 | MsG0480023280.01 | 0.803920 | 2.768442e-49 | 1.408651e-46 |
| MsG0280007369.01 | MsG0480023318.01 | 0.829076 | 6.303129e-55 | 6.382323e-52 |
| MsG0280007369.01 | MsG0480023417.01 | 0.805582 | 1.245420e-49 | 6.613311e-47 |
| MsG0280007369.01 | MsG0480023819.01 | 0.804455 | 2.143096e-49 | 1.105438e-46 |
| MsG0280007369.01 | MsG0480023947.01 | 0.879304 | 1.389878e-69 | 7.498192e-66 |
| MsG0280007369.01 | MsG0580024476.01 | 0.840264 | 9.657922e-58 | 1.368275e-54 |
| MsG0280007369.01 | MsG0580024575.01 | 0.807471 | 4.973832e-50 | 2.772842e-47 |
| MsG0280007369.01 | MsG0580025338.01 | 0.852614 | 4.111508e-61 | 8.639915e-58 |
| MsG0280007369.01 | MsG0580025860.01 | 0.806774 | 6.987110e-50 | 3.825107e-47 |
| MsG0280007369.01 | MsG0580025876.01 | 0.818821 | 1.604748e-52 | 1.213956e-49 |
| MsG0280007369.01 | MsG0580027073.01 | 0.869081 | 4.045631e-66 | 1.498369e-62 |
| MsG0280007369.01 | MsG0580027227.01 | 0.853041 | 3.105003e-61 | 6.619854e-58 |
| MsG0280007369.01 | MsG0580027733.01 | 0.809847 | 1.545221e-50 | 9.171527e-48 |
| MsG0280007369.01 | MsG0580027765.01 | 0.801024 | 1.094333e-48 | 5.172213e-46 |
| MsG0280007369.01 | MsG0580028355.01 | 0.839712 | 1.345228e-57 | 1.873313e-54 |
| MsG0280007369.01 | MsG0580028416.01 | 0.848460 | 6.045327e-60 | 1.110274e-56 |
| MsG0280007369.01 | MsG0580028560.01 | 0.843943 | 1.026624e-58 | 1.632036e-55 |
| MsG0280007369.01 | MsG0580028999.01 | 0.807736 | 4.368365e-50 | 2.452135e-47 |
| MsG0280007369.01 | MsG0580029583.01 | 0.818625 | 1.777387e-52 | 1.337274e-49 |
| MsG0280007369.01 | MsG0580029758.01 | 0.801242 | 9.875640e-49 | 4.693122e-46 |
| MsG0280007369.01 | MsG0580029906.01 | 0.831445 | 1.662490e-55 | 1.804534e-52 |
| MsG0280007369.01 | MsG0580029930.01 | 0.834696 | 2.582112e-56 | 3.087465e-53 |
| MsG0280007369.01 | MsG0680030996.01 | 0.806988 | 6.294937e-50 | 3.465366e-47 |
| MsG0280007369.01 | MsG0680031429.01 | 0.826994 | 1.998240e-54 | 1.904241e-51 |
| MsG0280007369.01 | MsG0680031814.01 | 0.810059 | 1.391193e-50 | 8.303269e-48 |
| MsG0280007369.01 | MsG0680034852.01 | 0.801073 | 1.069258e-48 | 5.059822e-46 |
| MsG0280007369.01 | MsG0680034919.01 | 0.810620 | 1.052870e-50 | 6.377523e-48 |
| MsG0280007369.01 | MsG0680035496.01 | 0.826103 | 3.260108e-54 | 3.028298e-51 |
| MsG0280007369.01 | MsG0780036514.01 | 0.839115 | 1.922018e-57 | 2.627956e-54 |
| MsG0280007369.01 | MsG0780037258.01 | 0.846473 | 2.124152e-59 | 3.660725e-56 |
| MsG0280007369.01 | MsG0780038123.01 | 0.843797 | 1.123016e-58 | 1.776945e-55 |
| MsG0280007369.01 | MsG0780038135.01 | 0.829028 | 6.473561e-55 | 6.545547e-52 |
| MsG0280007369.01 | MsG0780038444.01 | 0.803738 | 3.020812e-49 | 1.529792e-46 |
| MsG0280007369.01 | MsG0780038515.01 | 0.861874 | 7.549520e-64 | 2.167597e-60 |
| MsG0280007369.01 | MsG0780038925.01 | 0.836113 | 1.132104e-56 | 1.412816e-53 |
| MsG0280007369.01 | MsG0780038930.01 | 0.802142 | 6.456378e-49 | 3.138810e-46 |
| MsG0280007369.01 | MsG0780039334.01 | 0.803832 | 2.887410e-49 | 1.465813e-46 |
| MsG0280007369.01 | MsG0780039472.01 | 0.863839 | 1.869024e-64 | 5.746004e-61 |
| MsG0280007369.01 | MsG0780039769.01 | 0.800015 | 1.756894e-48 | 8.093135e-46 |
| MsG0280007369.01 | MsG0780039877.01 | 0.837980 | 3.772938e-57 | 4.983857e-54 |
| MsG0280007369.01 | MsG0780040144.01 | 0.812421 | 4.276009e-51 | 2.717679e-48 |
| MsG0280007369.01 | MsG0780041357.01 | 0.803643 | 3.161486e-49 | 1.597084e-46 |
| MsG0280007369.01 | MsG0780041380.01 | 0.852633 | 4.060582e-61 | 8.538098e-58 |
| MsG0280007369.01 | MsG0880041985.01 | 0.847637 | 1.019829e-59 | 1.824235e-56 |
| MsG0280007369.01 | MsG0880042320.01 | 0.849684 | 2.760291e-60 | 5.275158e-57 |
| MsG0280007369.01 | MsG0880042368.01 | 0.874843 | 4.918695e-68 | 2.248414e-64 |
| MsG0280007369.01 | MsG0880042843.01 | 0.850821 | 1.325512e-60 | 2.629470e-57 |
| MsG0280007369.01 | MsG0880042976.01 | 0.839597 | 1.440423e-57 | 1.998900e-54 |
| MsG0280007369.01 | MsG0880043094.01 | 0.828809 | 7.311219e-55 | 7.345508e-52 |
| MsG0280007369.01 | MsG0880043246.01 | 0.808924 | 2.438632e-50 | 1.412191e-47 |
| MsG0280007369.01 | MsG0880043285.01 | 0.831247 | 1.860393e-55 | 2.007177e-52 |
| MsG0280007369.01 | MsG0880043286.01 | 0.829748 | 4.327802e-55 | 4.470259e-52 |
| MsG0280007369.01 | MsG0880043715.01 | 0.831756 | 1.393488e-55 | 1.526713e-52 |
| MsG0280007369.01 | MsG0880043744.01 | 0.804004 | 2.660092e-49 | 1.356377e-46 |
| MsG0280007369.01 | MsG0880043824.01 | 0.822195 | 2.696678e-53 | 2.241448e-50 |
| MsG0280007369.01 | MsG0880044669.01 | 0.850194 | 1.987310e-60 | 3.861813e-57 |
| MsG0280007369.01 | MsG0880044837.01 | 0.801271 | 9.740991e-49 | 4.632453e-46 |
| MsG0280007369.01 | MsG0880045275.01 | 0.817370 | 3.415061e-52 | 2.482477e-49 |
| MsG0280007369.01 | MsG0880045277.01 | 0.840758 | 7.170761e-58 | 1.031618e-54 |
| MsG0280007369.01 | MsG0880045441.01 | 0.840021 | 1.117170e-57 | 1.571134e-54 |
| MsG0280007369.01 | MsG0880046586.01 | 0.817038 | 4.056731e-52 | 2.922205e-49 |
| MsG0280007369.01 | MsG0880046642.01 | 0.821814 | 3.305423e-53 | 2.717970e-50 |
| MsG0280007369.01 | MsG0880046888.01 | 0.809796 | 1.584786e-50 | 9.394002e-48 |
| MsG0280007369.01 | MsG0880046975.01 | 0.850372 | 1.772378e-60 | 3.464120e-57 |
| MsG0280007369.01 | MsG0880047081.01 | 0.877193 | 7.644816e-69 | 3.810008e-65 |
| MsG0280007369.01 | MsG0880047491.01 | 0.801294 | 9.636662e-49 | 4.585513e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007369.01.T01 | MTR_2g023930 | 74.623 | 398 | 34 | 7 | 6 | 342 | 143 | 534 | 4.27e-170 | 487 |
| MsG0280007369.01.T01 | MTR_4g132430 | 48.285 | 379 | 105 | 15 | 6 | 326 | 114 | 459 | 3.34e-82 | 260 |
| MsG0280007369.01.T01 | MTR_4g132430 | 47.486 | 358 | 97 | 15 | 27 | 326 | 1 | 325 | 5.44e-74 | 234 |
| MsG0280007369.01.T01 | MTR_3g053330 | 37.913 | 393 | 142 | 10 | 6 | 337 | 93 | 444 | 6.89e-68 | 222 |
| MsG0280007369.01.T01 | MTR_2g088000 | 54.380 | 274 | 80 | 10 | 92 | 348 | 325 | 570 | 3.97e-63 | 213 |
| MsG0280007369.01.T01 | MTR_7g110720 | 39.385 | 358 | 132 | 13 | 6 | 347 | 96 | 384 | 3.46e-54 | 184 |
| MsG0280007369.01.T01 | MTR_7g110720 | 38.525 | 366 | 151 | 11 | 6 | 347 | 96 | 411 | 7.94e-54 | 184 |
| MsG0280007369.01.T01 | MTR_4g047580 | 43.042 | 309 | 122 | 10 | 55 | 344 | 225 | 498 | 1.43e-53 | 186 |
| MsG0280007369.01.T01 | MTR_4g049790 | 33.643 | 431 | 154 | 14 | 6 | 345 | 131 | 520 | 9.34e-53 | 184 |
| MsG0280007369.01.T01 | MTR_4g049760 | 44.604 | 278 | 111 | 7 | 101 | 359 | 275 | 528 | 2.63e-49 | 175 |
| MsG0280007369.01.T01 | MTR_2g045360 | 29.949 | 394 | 176 | 15 | 5 | 343 | 67 | 415 | 2.24e-32 | 127 |
| MsG0280007369.01.T01 | MTR_7g009730 | 29.545 | 352 | 165 | 11 | 100 | 384 | 203 | 538 | 2.57e-26 | 111 |
| MsG0280007369.01.T01 | MTR_4g107970 | 39.333 | 300 | 131 | 10 | 87 | 338 | 150 | 446 | 1.36e-20 | 94.0 |
| MsG0280007369.01.T01 | MTR_4g107970 | 39.333 | 300 | 131 | 10 | 87 | 338 | 227 | 523 | 1.65e-20 | 94.0 |
| MsG0280007369.01.T01 | MTR_4g094412 | 53.846 | 78 | 29 | 1 | 99 | 169 | 217 | 294 | 9.05e-19 | 88.2 |
| MsG0280007369.01.T01 | MTR_4g094412 | 53.846 | 78 | 29 | 1 | 99 | 169 | 226 | 303 | 1.01e-18 | 88.2 |
| MsG0280007369.01.T01 | MTR_3g106060 | 32.768 | 177 | 106 | 3 | 13 | 178 | 33 | 207 | 1.56e-17 | 82.8 |
| MsG0280007369.01.T01 | MTR_4g007060 | 30.579 | 242 | 130 | 7 | 7 | 235 | 14 | 230 | 6.41e-17 | 80.9 |
| MsG0280007369.01.T01 | MTR_4g007060 | 30.579 | 242 | 130 | 7 | 7 | 235 | 48 | 264 | 8.43e-17 | 80.9 |
| MsG0280007369.01.T01 | MTR_1g013760 | 31.937 | 191 | 110 | 5 | 13 | 185 | 28 | 216 | 4.16e-16 | 78.6 |
| MsG0280007369.01.T01 | MTR_2g105060 | 32.370 | 173 | 96 | 6 | 13 | 169 | 62 | 229 | 1.02e-14 | 74.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007369.01.T01 | AT1G62300 | 44.965 | 427 | 119 | 15 | 6 | 346 | 156 | 552 | 2.84e-83 | 265 |
| MsG0280007369.01.T01 | AT4G04450 | 53.261 | 276 | 82 | 12 | 80 | 337 | 163 | 409 | 4.30e-66 | 216 |
| MsG0280007369.01.T01 | AT4G04450 | 35.156 | 128 | 60 | 6 | 8 | 129 | 20 | 130 | 2.58e-11 | 65.5 |
| MsG0280007369.01.T01 | AT4G04450 | 56.078 | 255 | 66 | 11 | 101 | 337 | 277 | 503 | 2.72e-65 | 217 |
| MsG0280007369.01.T01 | AT4G04450 | 35.156 | 128 | 60 | 6 | 8 | 129 | 114 | 224 | 3.66e-11 | 65.1 |
| MsG0280007369.01.T01 | AT4G22070 | 60.697 | 201 | 49 | 6 | 101 | 281 | 282 | 472 | 4.05e-46 | 166 |
| MsG0280007369.01.T01 | AT4G22070 | 35.606 | 132 | 70 | 4 | 5 | 129 | 109 | 232 | 1.91e-13 | 72.4 |
| MsG0280007369.01.T01 | AT4G22070 | 60.697 | 201 | 49 | 6 | 101 | 281 | 282 | 472 | 4.05e-46 | 166 |
| MsG0280007369.01.T01 | AT4G22070 | 35.606 | 132 | 70 | 4 | 5 | 129 | 109 | 232 | 1.91e-13 | 72.4 |
| MsG0280007369.01.T01 | AT4G22070 | 60.697 | 201 | 49 | 6 | 101 | 281 | 282 | 472 | 4.05e-46 | 166 |
| MsG0280007369.01.T01 | AT4G22070 | 35.606 | 132 | 70 | 4 | 5 | 129 | 109 | 232 | 1.91e-13 | 72.4 |
| MsG0280007369.01.T01 | AT4G22070 | 60.697 | 201 | 49 | 6 | 101 | 281 | 282 | 472 | 4.05e-46 | 166 |
| MsG0280007369.01.T01 | AT4G22070 | 35.606 | 132 | 70 | 4 | 5 | 129 | 109 | 232 | 1.91e-13 | 72.4 |
| MsG0280007369.01.T01 | AT4G01720 | 37.968 | 374 | 159 | 12 | 6 | 334 | 98 | 443 | 3.39e-36 | 138 |
| MsG0280007369.01.T01 | AT1G68150 | 32.444 | 225 | 105 | 6 | 9 | 190 | 96 | 316 | 3.58e-26 | 108 |
| MsG0280007369.01.T01 | AT5G15130 | 34.722 | 288 | 113 | 8 | 96 | 338 | 207 | 464 | 5.51e-24 | 104 |
| MsG0280007369.01.T01 | AT5G15130 | 34.722 | 288 | 113 | 8 | 96 | 338 | 165 | 422 | 5.73e-24 | 103 |
| MsG0280007369.01.T01 | AT1G18860 | 50.000 | 152 | 63 | 4 | 96 | 234 | 219 | 370 | 5.50e-20 | 92.0 |
| MsG0280007369.01.T01 | AT1G80840 | 33.721 | 172 | 98 | 5 | 13 | 169 | 36 | 206 | 2.56e-19 | 88.2 |
| MsG0280007369.01.T01 | AT1G69810 | 41.830 | 153 | 76 | 4 | 100 | 244 | 129 | 276 | 1.21e-17 | 83.6 |
| MsG0280007369.01.T01 | AT1G69810 | 41.830 | 153 | 76 | 4 | 100 | 244 | 187 | 334 | 1.73e-17 | 84.0 |
| MsG0280007369.01.T01 | AT4G31800 | 32.093 | 215 | 104 | 9 | 8 | 187 | 47 | 254 | 4.28e-16 | 79.0 |
| MsG0280007369.01.T01 | AT2G25000 | 35.165 | 182 | 86 | 8 | 10 | 174 | 24 | 190 | 1.09e-15 | 76.6 |
| MsG0280007369.01.T01 | AT2G25000 | 35.165 | 182 | 86 | 8 | 10 | 174 | 2 | 168 | 1.23e-15 | 76.3 |
| MsG0280007369.01.T01 | AT2G25000 | 35.165 | 182 | 86 | 8 | 10 | 174 | 2 | 168 | 1.23e-15 | 76.3 |
| MsG0280007369.01.T01 | AT2G25000 | 35.165 | 182 | 86 | 8 | 10 | 174 | 45 | 211 | 2.97e-15 | 75.9 |
| MsG0280007369.01.T01 | AT1G64000 | 43.056 | 72 | 33 | 2 | 103 | 167 | 101 | 171 | 1.63e-11 | 63.5 |
| MsG0280007369.01.T01 | AT5G41570 | 43.056 | 72 | 33 | 2 | 103 | 167 | 85 | 155 | 2.18e-11 | 62.8 |
| MsG0280007369.01.T01 | AT4G18170 | 41.096 | 73 | 37 | 1 | 103 | 169 | 159 | 231 | 8.91e-11 | 63.2 |
Find 73 sgRNAs with CRISPR-Local
Find 171 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTAAATATTCCTTTGTTCTT+AGG | 0.146906 | 2:+14630982 | MsG0280007369.01.T01:CDS |
| ATAGCTCTTGCTAATAAATT+TGG | 0.198143 | 2:-14630486 | None:intergenic |
| CTTTGAAATTGCAATGGATT+TGG | 0.199677 | 2:-14630594 | None:intergenic |
| GCGAGAACAGCGGTGAAATT+AGG | 0.306985 | 2:-14630855 | None:intergenic |
| TTTGAAATTGCAATGGATTT+GGG | 0.309204 | 2:-14630593 | None:intergenic |
| GCTGCTATCTCCTCCATTAT+TGG | 0.315481 | 2:+14630879 | MsG0280007369.01.T01:CDS |
| GGATGCCAATGGAGGAAATA+TGG | 0.352069 | 2:+14630007 | MsG0280007369.01.T01:CDS |
| CATAAGGACATGTCACCTTA+TGG | 0.361128 | 2:+14632014 | MsG0280007369.01.T01:CDS |
| TGCATGGCCACCACCAATAA+TGG | 0.361861 | 2:-14630892 | None:intergenic |
| CTTGAGATAGGTACTACTAA+TGG | 0.365396 | 2:+14629630 | MsG0280007369.01.T01:CDS |
| CAAGTACCTAGTTTCTTTCA+AGG | 0.368680 | 2:+14630639 | MsG0280007369.01.T01:CDS |
| CTGCAAAGCCGTGTAATTAC+CGG | 0.385725 | 2:-14629142 | None:intergenic |
| TTTGTCCATATTTCCTCCAT+TGG | 0.390389 | 2:-14630012 | None:intergenic |
| AAACTAGGTACTTGATGAAA+TGG | 0.398773 | 2:-14630630 | None:intergenic |
| CTTCAATTGTCTCAAGAAGT+TGG | 0.400880 | 2:+14630723 | MsG0280007369.01.T01:CDS |
| CCAAGACAATTTCTTGAGAT+AGG | 0.405230 | 2:+14629618 | MsG0280007369.01.T01:CDS |
| GCAGCAAGCATGTTACTATC+AGG | 0.425873 | 2:+14630432 | MsG0280007369.01.T01:CDS |
| GGCGGTGATAGCAGCGGTGG+CGG | 0.446253 | 2:-14630829 | None:intergenic |
| GCCATAGCTGCTGGTGGTAA+TGG | 0.452891 | 2:-14630387 | None:intergenic |
| ATCTCCTCCATTATTGGTGG+TGG | 0.457394 | 2:+14630885 | MsG0280007369.01.T01:CDS |
| CTATAGTATGCTCGAGGACA+TGG | 0.465899 | 2:-14630051 | None:intergenic |
| GAGATGCTAAGTCATGTTAC+CGG | 0.472299 | 2:+14629123 | MsG0280007369.01.T01:CDS |
| TACCATTGCTCCACCAACCT+TGG | 0.479625 | 2:-14629595 | None:intergenic |
| AGCATACTATAGATGCACTA+TGG | 0.487105 | 2:+14630062 | MsG0280007369.01.T01:CDS |
| TGCTAGATCAGAAGCTTCAA+TGG | 0.495447 | 2:+14629876 | MsG0280007369.01.T01:CDS |
| TGTTGTTGCTATTGTTTGCA+TGG | 0.495497 | 2:-14630908 | None:intergenic |
| TGCCGAGGACAAAACAATCT+TGG | 0.496599 | 2:+14630335 | MsG0280007369.01.T01:CDS |
| GTGAGATCTAATGTAACAGT+AGG | 0.521520 | 2:-14630558 | None:intergenic |
| AATTGCAAGTGGAGCTTCAA+CGG | 0.528483 | 2:+14629073 | MsG0280007369.01.T01:CDS |
| GGATCAATGTCAAGTGCAGA+TGG | 0.534800 | 2:+14630453 | MsG0280007369.01.T01:CDS |
| ACTGCGTAAACAACACCATA+AGG | 0.538425 | 2:-14632029 | None:intergenic |
| ATCTTGGTAACAACATATGA+AGG | 0.541003 | 2:+14630351 | MsG0280007369.01.T01:CDS |
| TCCATTACCACCAGCAGCTA+TGG | 0.541740 | 2:+14630386 | MsG0280007369.01.T01:CDS |
| GCTATCTCCTCCATTATTGG+TGG | 0.542504 | 2:+14630882 | MsG0280007369.01.T01:CDS |
| GATGCCATTGCCATAGCTGC+TGG | 0.545474 | 2:-14630396 | None:intergenic |
| AACCAAGGTTGGTGGAGCAA+TGG | 0.548285 | 2:+14629593 | MsG0280007369.01.T01:CDS |
| GAATCACCACACTGAAAATG+AGG | 0.553361 | 2:+14629191 | MsG0280007369.01.T01:CDS |
| ATGTAACAAGACATTGCATA+AGG | 0.558212 | 2:+14631998 | MsG0280007369.01.T01:CDS |
| TCTACCTTGTTCAACAAGCA+TGG | 0.561460 | 2:+14630509 | MsG0280007369.01.T01:CDS |
| CCTATCTCAAGAAATTGTCT+TGG | 0.566117 | 2:-14629618 | None:intergenic |
| TCAGCTTGCACAATTGCAAG+TGG | 0.569056 | 2:+14629062 | MsG0280007369.01.T01:CDS |
| TCATGTTACCGGTAATTACA+CGG | 0.577854 | 2:+14629134 | MsG0280007369.01.T01:CDS |
| TTGTTGGCTTGGAGCTTGTG+TGG | 0.580944 | 2:-14630760 | None:intergenic |
| CTGACCGAGTCAGCTAAAGA+AGG | 0.586174 | 2:-14630804 | None:intergenic |
| TTCTGTCCTTGAAAGAAACT+AGG | 0.586929 | 2:-14630645 | None:intergenic |
| CAATGAGAAAGCTCGTGTCT+CGG | 0.587383 | 2:+14629849 | MsG0280007369.01.T01:CDS |
| TGAGGTCTTTGAAATTGCAA+TGG | 0.588002 | 2:-14630600 | None:intergenic |
| TAACATGCTTGCTGCTGCTG+AGG | 0.595156 | 2:-14630424 | None:intergenic |
| ACAGCCTTCTTTAGCTGACT+CGG | 0.597997 | 2:+14630800 | MsG0280007369.01.T01:CDS |
| TGTACGGTGTAAATCTAGTA+CGG | 0.599870 | 2:-14632056 | None:intergenic |
| TCTAATGTAACAGTAGGGAA+TGG | 0.608110 | 2:-14630552 | None:intergenic |
| GGCTTTGCAGATGCAACTTG+TGG | 0.608912 | 2:+14629155 | MsG0280007369.01.T01:CDS |
| GGATAATTGCAGATAAGTGA+TGG | 0.611432 | 2:+14629986 | MsG0280007369.01.T01:intron |
| ATCGGCGGTGATAGCAGCGG+TGG | 0.617279 | 2:-14630832 | None:intergenic |
| TGAGATCTAATGTAACAGTA+GGG | 0.618128 | 2:-14630557 | None:intergenic |
| GAGTCAGCTAAAGAAGGCTG+TGG | 0.624335 | 2:-14630798 | None:intergenic |
| ACCACCAGCAGCTATGGCAA+TGG | 0.626876 | 2:+14630392 | MsG0280007369.01.T01:CDS |
| ATAGGTTCAACGTTGTGCCG+AGG | 0.627663 | 2:+14630320 | MsG0280007369.01.T01:intron |
| TATAGATGCACTATGGCAGT+CGG | 0.632166 | 2:+14630069 | MsG0280007369.01.T01:CDS |
| TGATGAAATGGTGCATGTTG+AGG | 0.633017 | 2:-14630618 | None:intergenic |
| TAGCTGCTGGTGGTAATGGA+TGG | 0.633923 | 2:-14630383 | None:intergenic |
| AACAAGGAACCTAAGAACAA+AGG | 0.634270 | 2:-14630991 | None:intergenic |
| GTTGCCATGCTTGTTGAACA+AGG | 0.639105 | 2:-14630513 | None:intergenic |
| GATAGCAGCTGCGAGAACAG+CGG | 0.642227 | 2:-14630865 | None:intergenic |
| AGCGGTGAAATTAGGATCGG+CGG | 0.644865 | 2:-14630847 | None:intergenic |
| AACAGCGGTGAAATTAGGAT+CGG | 0.645945 | 2:-14630850 | None:intergenic |
| TAAGTGATGGATGCCAATGG+AGG | 0.670782 | 2:+14629999 | MsG0280007369.01.T01:CDS |
| GTGCATCTATAGTATGCTCG+AGG | 0.675667 | 2:-14630057 | None:intergenic |
| AGGATCGGCGGTGATAGCAG+CGG | 0.681008 | 2:-14630835 | None:intergenic |
| GCCATTGCCATAGCTGCTGG+TGG | 0.689582 | 2:-14630393 | None:intergenic |
| ATGGCCACCACCAATAATGG+AGG | 0.694001 | 2:-14630889 | None:intergenic |
| AGGTTGTTAATGCAAAACTG+AGG | 0.707012 | 2:+14629565 | MsG0280007369.01.T01:intron |
| AGATAAGTGATGGATGCCAA+TGG | 0.716557 | 2:+14629996 | MsG0280007369.01.T01:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTAATATTGTTAAAATTC+AGG | + | Chr2:14629545-14629564 | MsG0280007369.01.T01:intron | 10.0% |
| !!! | AAACAAATTTATTTGATTTT+TGG | + | Chr2:14631676-14631695 | MsG0280007369.01.T01:intron | 10.0% |
| !!! | GGAATAATATATTTTTAAAA+AGG | - | Chr2:14631034-14631053 | None:intergenic | 10.0% |
| !! | AATTAAATCACAATTGATTA+AGG | + | Chr2:14629918-14629937 | MsG0280007369.01.T01:intron | 15.0% |
| !! | ATAATATTATCTGAAAAACA+AGG | - | Chr2:14631010-14631029 | None:intergenic | 15.0% |
| !! | TAAAATTCAACTTACAATTA+GGG | - | Chr2:14631520-14631539 | None:intergenic | 15.0% |
| !! | TCTATATGAAATATTAGTAA+TGG | - | Chr2:14631449-14631468 | None:intergenic | 15.0% |
| !!! | TTATTTGATTTTTGGTTTAA+AGG | + | Chr2:14631684-14631703 | MsG0280007369.01.T01:intron | 15.0% |
| !!! | TTTGATGTTTTTTTGTTAAT+AGG | + | Chr2:14630302-14630321 | MsG0280007369.01.T01:intron | 15.0% |
| !! | AGTTTATTTATCAATGTAGA+CGG | - | Chr2:14631553-14631572 | None:intergenic | 20.0% |
| !! | ATAATGATTAGAGATAGATA+AGG | + | Chr2:14631793-14631812 | MsG0280007369.01.T01:intron | 20.0% |
| !! | CTAAAATTCAACTTACAATT+AGG | - | Chr2:14631521-14631540 | None:intergenic | 20.0% |
| !! | TATGGAATTCAAATCTTAAA+TGG | + | Chr2:14629312-14629331 | MsG0280007369.01.T01:intron | 20.0% |
| !!! | ATTATTCCTTTTTTTGTACA+TGG | + | Chr2:14631046-14631065 | MsG0280007369.01.T01:intron | 20.0% |
| !!! | TATAATCAGTCAAAATTTTC+TGG | + | Chr2:14630699-14630718 | MsG0280007369.01.T01:CDS | 20.0% |
| !!! | TGTTTTCAATATTTTCAGAA+AGG | - | Chr2:14631297-14631316 | None:intergenic | 20.0% |
| !!! | TTATTCCTTTTTTTGTACAT+GGG | + | Chr2:14631047-14631066 | MsG0280007369.01.T01:intron | 20.0% |
| !!! | TTTTTCACATTGAATAATCT+AGG | + | Chr2:14631187-14631206 | MsG0280007369.01.T01:intron | 20.0% |
| ! | AAATATTGAAAACACGTACA+TGG | + | Chr2:14631303-14631322 | MsG0280007369.01.T01:intron | 25.0% |
| ! | AATTTAGAAAAAGCGACATT+TGG | - | Chr2:14630172-14630191 | None:intergenic | 25.0% |
| ! | ATAGCTCTTGCTAATAAATT+TGG | - | Chr2:14630489-14630508 | None:intergenic | 25.0% |
| ! | ATGAATATGATTACTCCAAA+CGG | - | Chr2:14631956-14631975 | None:intergenic | 25.0% |
| ! | CAATCTGGCATATAATATAA+GGG | - | Chr2:14629511-14629530 | None:intergenic | 25.0% |
| ! | CTAAATATTCCTTTGTTCTT+AGG | + | Chr2:14630982-14631001 | MsG0280007369.01.T01:CDS | 25.0% |
| ! | CTTAATCAATAAATAGGATG+TGG | + | Chr2:14631820-14631839 | MsG0280007369.01.T01:intron | 25.0% |
| ! | GACTTTGTAAACTCAAAATA+TGG | + | Chr2:14629294-14629313 | MsG0280007369.01.T01:intron | 25.0% |
| ! | GGTCAACTTAATCAATAAAT+AGG | + | Chr2:14631814-14631833 | MsG0280007369.01.T01:intron | 25.0% |
| ! | TCTTGACCAATAGAAAAATT+CGG | - | Chr2:14631419-14631438 | None:intergenic | 25.0% |
| ! | TTATTAACATGTTACCAATC+TGG | - | Chr2:14629526-14629545 | None:intergenic | 25.0% |
| ! | TTCTAAATTAGTGACGAAAT+TGG | + | Chr2:14630183-14630202 | MsG0280007369.01.T01:intron | 25.0% |
| ! | TTTCTATTGGTCAAGAAATA+CGG | + | Chr2:14631423-14631442 | MsG0280007369.01.T01:intron | 25.0% |
| !! | AATACAATTAGCAACTTTTC+AGG | + | Chr2:14630956-14630975 | MsG0280007369.01.T01:CDS | 25.0% |
| !! | CAATATTTTCAGAAAGGATA+TGG | - | Chr2:14631291-14631310 | None:intergenic | 25.0% |
| !! | GAATATCCGAATTTTTCTAT+TGG | + | Chr2:14631410-14631429 | MsG0280007369.01.T01:intron | 25.0% |
| !! | TTTCTAACTGAATTTTGTGA+TGG | + | Chr2:14629965-14629984 | MsG0280007369.01.T01:intron | 25.0% |
| !! | TTTGAAATTGCAATGGATTT+GGG | - | Chr2:14630596-14630615 | None:intergenic | 25.0% |
| !!! | ACATTTGGACTATTTTTTAG+TGG | - | Chr2:14630157-14630176 | None:intergenic | 25.0% |
| !!! | CTTTTTAGTCCATATGTTTT+GGG | + | Chr2:14631097-14631116 | MsG0280007369.01.T01:intron | 25.0% |
| !!! | TCTTTTGTTGTTTAGTAGAT+AGG | - | Chr2:14631332-14631351 | None:intergenic | 25.0% |
| !!! | TCTTTTTAGTCCATATGTTT+TGG | + | Chr2:14631096-14631115 | MsG0280007369.01.T01:intron | 25.0% |
| AAACTAGGTACTTGATGAAA+TGG | - | Chr2:14630633-14630652 | None:intergenic | 30.0% | |
| ACTTTCCCATGTACAAAAAA+AGG | - | Chr2:14631055-14631074 | None:intergenic | 30.0% | |
| AGCAAATAGTAATACACACT+TGG | - | Chr2:14631388-14631407 | None:intergenic | 30.0% | |
| ATATGGACAAAAATGGCTAA+AGG | + | Chr2:14630024-14630043 | MsG0280007369.01.T01:CDS | 30.0% | |
| ATGTAACAAGACATTGCATA+AGG | + | Chr2:14631998-14632017 | MsG0280007369.01.T01:CDS | 30.0% | |
| CCAATCTGGCATATAATATA+AGG | - | Chr2:14629512-14629531 | None:intergenic | 30.0% | |
| CCTTATATTATATGCCAGAT+TGG | + | Chr2:14629509-14629528 | MsG0280007369.01.T01:intron | 30.0% | |
| GAGTAATCATATTCATGTGA+GGG | + | Chr2:14631960-14631979 | MsG0280007369.01.T01:intron | 30.0% | |
| TCGTTATCTTTCCTTATCTT+TGG | + | Chr2:14631264-14631283 | MsG0280007369.01.T01:intron | 30.0% | |
| TGAATATGATTACTCCAAAC+GGG | - | Chr2:14631955-14631974 | None:intergenic | 30.0% | |
| TGAGATCTAATGTAACAGTA+GGG | - | Chr2:14630560-14630579 | None:intergenic | 30.0% | |
| TTCATGACATGTCAATTTAG+TGG | + | Chr2:14629262-14629281 | MsG0280007369.01.T01:intron | 30.0% | |
| TTGACTTTGTGTTGAGTTAA+TGG | + | Chr2:14631898-14631917 | MsG0280007369.01.T01:intron | 30.0% | |
| ! | ATCTTGGTAACAACATATGA+AGG | + | Chr2:14630351-14630370 | MsG0280007369.01.T01:CDS | 30.0% |
| ! | TAATTACCTCATTTTCAGTG+TGG | - | Chr2:14629200-14629219 | None:intergenic | 30.0% |
| !! | CTTTGAAATTGCAATGGATT+TGG | - | Chr2:14630597-14630616 | None:intergenic | 30.0% |
| !!! | TCAATTTTCTGAGACTTGTT+TGG | - | Chr2:14629791-14629810 | None:intergenic | 30.0% |
| AAAACTGAGGAGAAAAACCA+AGG | + | Chr2:14629578-14629597 | MsG0280007369.01.T01:CDS | 35.0% | |
| AACAAGGAACCTAAGAACAA+AGG | - | Chr2:14630994-14631013 | None:intergenic | 35.0% | |
| AAGGATATGGTCCAAAGATA+AGG | - | Chr2:14631278-14631297 | None:intergenic | 35.0% | |
| ACTTTGTGTTGAGTTAATGG+TGG | + | Chr2:14631901-14631920 | MsG0280007369.01.T01:intron | 35.0% | |
| AGCATACTATAGATGCACTA+TGG | + | Chr2:14630062-14630081 | MsG0280007369.01.T01:CDS | 35.0% | |
| AGGAATAGCAATGGTAAAAC+TGG | + | Chr2:14629725-14629744 | MsG0280007369.01.T01:intron | 35.0% | |
| AGGTTGTTAATGCAAAACTG+AGG | + | Chr2:14629565-14629584 | MsG0280007369.01.T01:intron | 35.0% | |
| AGTATACTAACATCTCATGC+AGG | - | Chr2:14629390-14629409 | None:intergenic | 35.0% | |
| ATAGCAATGGTAAAACTGGT+AGG | + | Chr2:14629729-14629748 | MsG0280007369.01.T01:intron | 35.0% | |
| ATTACTCCAAACGGGTATTA+AGG | - | Chr2:14631947-14631966 | None:intergenic | 35.0% | |
| ATTTGCTTGATCTGCAACAT+TGG | - | Chr2:14629820-14629839 | None:intergenic | 35.0% | |
| CAAGTACCTAGTTTCTTTCA+AGG | + | Chr2:14630639-14630658 | MsG0280007369.01.T01:CDS | 35.0% | |
| CATATAGACACGTCATTGTA+TGG | + | Chr2:14631461-14631480 | MsG0280007369.01.T01:intron | 35.0% | |
| CCAAGACAATTTCTTGAGAT+AGG | + | Chr2:14629618-14629637 | MsG0280007369.01.T01:CDS | 35.0% | |
| CCTATCTCAAGAAATTGTCT+TGG | - | Chr2:14629621-14629640 | None:intergenic | 35.0% | |
| CTTCAATTGTCTCAAGAAGT+TGG | + | Chr2:14630723-14630742 | MsG0280007369.01.T01:CDS | 35.0% | |
| CTTGAGATAGGTACTACTAA+TGG | + | Chr2:14629630-14629649 | MsG0280007369.01.T01:CDS | 35.0% | |
| GGAGGAAATATGGACAAAAA+TGG | + | Chr2:14630017-14630036 | MsG0280007369.01.T01:CDS | 35.0% | |
| GGAGTAATCATATTCATGTG+AGG | + | Chr2:14631959-14631978 | MsG0280007369.01.T01:intron | 35.0% | |
| GGATAATTGCAGATAAGTGA+TGG | + | Chr2:14629986-14630005 | MsG0280007369.01.T01:intron | 35.0% | |
| GTGAGATCTAATGTAACAGT+AGG | - | Chr2:14630561-14630580 | None:intergenic | 35.0% | |
| GTGGAAATTGAAAAGTGAGT+TGG | + | Chr2:14631839-14631858 | MsG0280007369.01.T01:intron | 35.0% | |
| TAGCAATGGTAAAACTGGTA+GGG | + | Chr2:14629730-14629749 | MsG0280007369.01.T01:intron | 35.0% | |
| TCATGTTACCGGTAATTACA+CGG | + | Chr2:14629134-14629153 | MsG0280007369.01.T01:CDS | 35.0% | |
| TCTAATGTAACAGTAGGGAA+TGG | - | Chr2:14630555-14630574 | None:intergenic | 35.0% | |
| TTAGTGACGAAATTGGAGAT+AGG | + | Chr2:14630190-14630209 | MsG0280007369.01.T01:intron | 35.0% | |
| TTCTGTCCTTGAAAGAAACT+AGG | - | Chr2:14630648-14630667 | None:intergenic | 35.0% | |
| TTTGTCCATATTTCCTCCAT+TGG | - | Chr2:14630015-14630034 | None:intergenic | 35.0% | |
| ! | GTTGTTGTTGTTGTTGTTGT+TGG | - | Chr2:14630779-14630798 | None:intergenic | 35.0% |
| ! | TGTTGTTGCTATTGTTTGCA+TGG | - | Chr2:14630911-14630930 | None:intergenic | 35.0% |
| !! | ATGTGAGGGTATTTACGTTA+GGG | + | Chr2:14631974-14631993 | MsG0280007369.01.T01:intron | 35.0% |
| !! | TACCAAGATTGTTTTGTCCT+CGG | - | Chr2:14630340-14630359 | None:intergenic | 35.0% |
| !! | TGAGGTCTTTGAAATTGCAA+TGG | - | Chr2:14630603-14630622 | None:intergenic | 35.0% |
| !!! | TCCATATGTTTTGGGATTGA+GGG | + | Chr2:14631105-14631124 | MsG0280007369.01.T01:intron | 35.0% |
| AAACTCACTTGTTTGCGAAC+TGG | - | Chr2:14630099-14630118 | None:intergenic | 40.0% | |
| AACAGCGGTGAAATTAGGAT+CGG | - | Chr2:14630853-14630872 | None:intergenic | 40.0% | |
| AATTGCAAGTGGAGCTTCAA+CGG | + | Chr2:14629073-14629092 | MsG0280007369.01.T01:CDS | 40.0% | |
| ACTGCGTAAACAACACCATA+AGG | - | Chr2:14632032-14632051 | None:intergenic | 40.0% | |
| AGAATCAGAAACACAAGGCT+GGG | + | Chr2:14629763-14629782 | MsG0280007369.01.T01:intron | 40.0% | |
| AGGAAGTAGTAATCCAAAGG+TGG | + | Chr2:14631485-14631504 | MsG0280007369.01.T01:intron | 40.0% | |
| AGTCCAGAATCAGAAACACA+AGG | + | Chr2:14629758-14629777 | MsG0280007369.01.T01:intron | 40.0% | |
| AGTTTCTTAGTAGGTTCGTG+TGG | + | Chr2:14631744-14631763 | MsG0280007369.01.T01:intron | 40.0% | |
| CATAAGGACATGTCACCTTA+TGG | + | Chr2:14632014-14632033 | MsG0280007369.01.T01:CDS | 40.0% | |
| GAATCACCACACTGAAAATG+AGG | + | Chr2:14629191-14629210 | MsG0280007369.01.T01:CDS | 40.0% | |
| GAGATGCTAAGTCATGTTAC+CGG | + | Chr2:14629123-14629142 | MsG0280007369.01.T01:CDS | 40.0% | |
| GGTAGGAAGTAGTAATCCAA+AGG | + | Chr2:14631482-14631501 | MsG0280007369.01.T01:intron | 40.0% | |
| TAGACACGTCATTGTATGGT+AGG | + | Chr2:14631465-14631484 | MsG0280007369.01.T01:intron | 40.0% | |
| TAGTACAAGCTAGGAGATGT+GGG | + | Chr2:14631713-14631732 | MsG0280007369.01.T01:intron | 40.0% | |
| TATAGATGCACTATGGCAGT+CGG | + | Chr2:14630069-14630088 | MsG0280007369.01.T01:CDS | 40.0% | |
| TCTACCTTGTTCAACAAGCA+TGG | + | Chr2:14630509-14630528 | MsG0280007369.01.T01:CDS | 40.0% | |
| TGATGAAATGGTGCATGTTG+AGG | - | Chr2:14630621-14630640 | None:intergenic | 40.0% | |
| TGCTAGATCAGAAGCTTCAA+TGG | + | Chr2:14629876-14629895 | MsG0280007369.01.T01:CDS | 40.0% | |
| ! | TGTTGTTGTTGTTGTTGGCT+TGG | - | Chr2:14630774-14630793 | None:intergenic | 40.0% |
| !! | AGATAAGTGATGGATGCCAA+TGG | + | Chr2:14629996-14630015 | MsG0280007369.01.T01:intron | 40.0% |
| !! | AGGAAGTACTAGTACAAGCT+AGG | + | Chr2:14631704-14631723 | MsG0280007369.01.T01:intron | 40.0% |
| !! | CATGTGAGGGTATTTACGTT+AGG | + | Chr2:14631973-14631992 | MsG0280007369.01.T01:intron | 40.0% |
| !! | TGTGAGGGTATTTACGTTAG+GGG | + | Chr2:14631975-14631994 | MsG0280007369.01.T01:intron | 40.0% |
| !!! | CCATATGTTTTGGGATTGAG+GGG | + | Chr2:14631106-14631125 | MsG0280007369.01.T01:intron | 40.0% |
| !!! | GTCCATATGTTTTGGGATTG+AGG | + | Chr2:14631104-14631123 | MsG0280007369.01.T01:intron | 40.0% |
| ACAGCCTTCTTTAGCTGACT+CGG | + | Chr2:14630800-14630819 | MsG0280007369.01.T01:CDS | 45.0% | |
| ACTCCAAACGGGTATTAAGG+TGG | - | Chr2:14631944-14631963 | None:intergenic | 45.0% | |
| AGATCAACACACCTCAGATG+AGG | + | Chr2:14629705-14629724 | MsG0280007369.01.T01:intron | 45.0% | |
| AGGAGAAAAACCAAGGTTGG+TGG | + | Chr2:14629585-14629604 | MsG0280007369.01.T01:CDS | 45.0% | |
| AGTACAAGCTAGGAGATGTG+GGG | + | Chr2:14631714-14631733 | MsG0280007369.01.T01:intron | 45.0% | |
| ATCTCCTCCATTATTGGTGG+TGG | + | Chr2:14630885-14630904 | MsG0280007369.01.T01:CDS | 45.0% | |
| CAATGAGAAAGCTCGTGTCT+CGG | + | Chr2:14629849-14629868 | MsG0280007369.01.T01:CDS | 45.0% | |
| CAGAATCAGAAACACAAGGC+TGG | + | Chr2:14629762-14629781 | MsG0280007369.01.T01:intron | 45.0% | |
| CCCCTCAATCCCAAAACATA+TGG | - | Chr2:14631109-14631128 | None:intergenic | 45.0% | |
| CCTCAGATGAGGAATAGCAA+TGG | + | Chr2:14629716-14629735 | MsG0280007369.01.T01:intron | 45.0% | |
| CTAGTACAAGCTAGGAGATG+TGG | + | Chr2:14631712-14631731 | MsG0280007369.01.T01:intron | 45.0% | |
| CTATAGTATGCTCGAGGACA+TGG | - | Chr2:14630054-14630073 | None:intergenic | 45.0% | |
| CTGAGGAGAAAAACCAAGGT+TGG | + | Chr2:14629582-14629601 | MsG0280007369.01.T01:CDS | 45.0% | |
| CTGCAAAGCCGTGTAATTAC+CGG | - | Chr2:14629145-14629164 | None:intergenic | 45.0% | |
| GAATCAGAAACACAAGGCTG+GGG | + | Chr2:14629764-14629783 | MsG0280007369.01.T01:intron | 45.0% | |
| GCAGCAAGCATGTTACTATC+AGG | + | Chr2:14630432-14630451 | MsG0280007369.01.T01:CDS | 45.0% | |
| GCTATCTCCTCCATTATTGG+TGG | + | Chr2:14630882-14630901 | MsG0280007369.01.T01:CDS | 45.0% | |
| GCTGCTATCTCCTCCATTAT+TGG | + | Chr2:14630879-14630898 | MsG0280007369.01.T01:CDS | 45.0% | |
| GGATCAATGTCAAGTGCAGA+TGG | + | Chr2:14630453-14630472 | MsG0280007369.01.T01:CDS | 45.0% | |
| GGATGCCAATGGAGGAAATA+TGG | + | Chr2:14630007-14630026 | MsG0280007369.01.T01:CDS | 45.0% | |
| GGGCTATGGAGTTTCTTAGT+AGG | + | Chr2:14631735-14631754 | MsG0280007369.01.T01:intron | 45.0% | |
| GTGCATCTATAGTATGCTCG+AGG | - | Chr2:14630060-14630079 | None:intergenic | 45.0% | |
| TCAGCTTGCACAATTGCAAG+TGG | + | Chr2:14629062-14629081 | MsG0280007369.01.T01:CDS | 45.0% | |
| TGCCGAGGACAAAACAATCT+TGG | + | Chr2:14630335-14630354 | MsG0280007369.01.T01:CDS | 45.0% | |
| TTGCCACCTTAATACCCGTT+TGG | + | Chr2:14631938-14631957 | MsG0280007369.01.T01:intron | 45.0% | |
| ! | CAGCCTTGTGTTTCTGATTC+TGG | - | Chr2:14629764-14629783 | None:intergenic | 45.0% |
| ! | CCATTGCTATTCCTCATCTG+AGG | - | Chr2:14629719-14629738 | None:intergenic | 45.0% |
| ! | GTTGCCATGCTTGTTGAACA+AGG | - | Chr2:14630516-14630535 | None:intergenic | 45.0% |
| !! | TAAGTGATGGATGCCAATGG+AGG | + | Chr2:14629999-14630018 | MsG0280007369.01.T01:CDS | 45.0% |
| AGCGGTGAAATTAGGATCGG+CGG | - | Chr2:14630850-14630869 | None:intergenic | 50.0% | |
| AGGGTAGCTAAGTCCACCTT+TGG | - | Chr2:14631501-14631520 | None:intergenic | 50.0% | |
| ATAGGTTCAACGTTGTGCCG+AGG | + | Chr2:14630320-14630339 | MsG0280007369.01.T01:intron | 50.0% | |
| ATGGCCACCACCAATAATGG+AGG | - | Chr2:14630892-14630911 | None:intergenic | 50.0% | |
| CTGACCGAGTCAGCTAAAGA+AGG | - | Chr2:14630807-14630826 | None:intergenic | 50.0% | |
| GAGTCAGCTAAAGAAGGCTG+TGG | - | Chr2:14630801-14630820 | None:intergenic | 50.0% | |
| GCGAGAACAGCGGTGAAATT+AGG | - | Chr2:14630858-14630877 | None:intergenic | 50.0% | |
| GGCTTTGCAGATGCAACTTG+TGG | + | Chr2:14629155-14629174 | MsG0280007369.01.T01:CDS | 50.0% | |
| GTACAAGCTAGGAGATGTGG+GGG | + | Chr2:14631715-14631734 | MsG0280007369.01.T01:intron | 50.0% | |
| TACCATTGCTCCACCAACCT+TGG | - | Chr2:14629598-14629617 | None:intergenic | 50.0% | |
| TCCATTACCACCAGCAGCTA+TGG | + | Chr2:14630386-14630405 | MsG0280007369.01.T01:CDS | 50.0% | |
| TGCATGGCCACCACCAATAA+TGG | - | Chr2:14630895-14630914 | None:intergenic | 50.0% | |
| ! | TAACATGCTTGCTGCTGCTG+AGG | - | Chr2:14630427-14630446 | None:intergenic | 50.0% |
| !! | AACCAAGGTTGGTGGAGCAA+TGG | + | Chr2:14629593-14629612 | MsG0280007369.01.T01:CDS | 50.0% |
| !! | GTGAGTTGGTGAGCGTTGAT+TGG | + | Chr2:14631853-14631872 | MsG0280007369.01.T01:intron | 50.0% |
| !! | TAGCTGCTGGTGGTAATGGA+TGG | - | Chr2:14630386-14630405 | None:intergenic | 50.0% |
| !! | TTGTTGGCTTGGAGCTTGTG+TGG | - | Chr2:14630763-14630782 | None:intergenic | 50.0% |
| ACCACCAGCAGCTATGGCAA+TGG | + | Chr2:14630392-14630411 | MsG0280007369.01.T01:CDS | 55.0% | |
| GATAGCAGCTGCGAGAACAG+CGG | - | Chr2:14630868-14630887 | None:intergenic | 55.0% | |
| GATGCCATTGCCATAGCTGC+TGG | - | Chr2:14630399-14630418 | None:intergenic | 55.0% | |
| GCCATAGCTGCTGGTGGTAA+TGG | - | Chr2:14630390-14630409 | None:intergenic | 55.0% | |
| AGGATCGGCGGTGATAGCAG+CGG | - | Chr2:14630838-14630857 | None:intergenic | 60.0% | |
| GCCATTGCCATAGCTGCTGG+TGG | - | Chr2:14630396-14630415 | None:intergenic | 60.0% | |
| GCTAGGAGATGTGGGGGCTA+TGG | + | Chr2:14631721-14631740 | MsG0280007369.01.T01:intron | 60.0% | |
| ATCGGCGGTGATAGCAGCGG+TGG | - | Chr2:14630835-14630854 | None:intergenic | 65.0% | |
| GGCGGTGATAGCAGCGGTGG+CGG | - | Chr2:14630832-14630851 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr2 | gene | 14629048 | 14632064 | 14629048 | ID=MsG0280007369.01;Name=MsG0280007369.01 |
| Chr2 | mRNA | 14629048 | 14632064 | 14629048 | ID=MsG0280007369.01.T01;Parent=MsG0280007369.01;Name=MsG0280007369.01.T01;_AED=0.34;_eAED=0.34;_QI=0|0.4|0|0.83|0.6|0.5|6|0|394 |
| Chr2 | exon | 14629048 | 14629212 | 14629048 | ID=MsG0280007369.01.T01:exon:840;Parent=MsG0280007369.01.T01 |
| Chr2 | exon | 14629567 | 14629674 | 14629567 | ID=MsG0280007369.01.T01:exon:841;Parent=MsG0280007369.01.T01 |
| Chr2 | exon | 14629829 | 14629897 | 14629829 | ID=MsG0280007369.01.T01:exon:842;Parent=MsG0280007369.01.T01 |
| Chr2 | exon | 14629998 | 14630090 | 14629998 | ID=MsG0280007369.01.T01:exon:843;Parent=MsG0280007369.01.T01 |
| Chr2 | exon | 14630324 | 14631003 | 14630324 | ID=MsG0280007369.01.T01:exon:844;Parent=MsG0280007369.01.T01 |
| Chr2 | exon | 14631995 | 14632064 | 14631995 | ID=MsG0280007369.01.T01:exon:845;Parent=MsG0280007369.01.T01 |
| Chr2 | CDS | 14629048 | 14629212 | 14629048 | ID=MsG0280007369.01.T01:cds;Parent=MsG0280007369.01.T01 |
| Chr2 | CDS | 14629567 | 14629674 | 14629567 | ID=MsG0280007369.01.T01:cds;Parent=MsG0280007369.01.T01 |
| Chr2 | CDS | 14629829 | 14629897 | 14629829 | ID=MsG0280007369.01.T01:cds;Parent=MsG0280007369.01.T01 |
| Chr2 | CDS | 14629998 | 14630090 | 14629998 | ID=MsG0280007369.01.T01:cds;Parent=MsG0280007369.01.T01 |
| Chr2 | CDS | 14630324 | 14631003 | 14630324 | ID=MsG0280007369.01.T01:cds;Parent=MsG0280007369.01.T01 |
| Chr2 | CDS | 14631995 | 14632064 | 14631995 | ID=MsG0280007369.01.T01:cds;Parent=MsG0280007369.01.T01 |
| Gene Sequence |
| Protein sequence |
