AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780036470.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780036470.01.T01 MTR_3g092070 75.460 163 14 3 13 169 24 166 1.81e-75 231
MsG0780036470.01.T01 MTR_3g092070 75.460 163 14 3 13 169 24 166 3.46e-75 229
MsG0780036470.01.T01 MTR_3g092080 65.294 170 32 4 7 169 20 169 1.52e-64 202
MsG0780036470.01.T01 MTR_3g092080 65.294 170 32 4 7 169 20 169 1.85e-64 203
MsG0780036470.01.T01 MTR_4g074920 64.286 98 35 0 76 173 661 758 4.54e-36 133
MsG0780036470.01.T01 MTR_3g089100 55.652 115 42 1 68 173 906 1020 4.91e-35 130
MsG0780036470.01.T01 MTR_3g089100 55.652 115 42 1 68 173 872 986 5.09e-35 130
MsG0780036470.01.T01 MTR_3g089100 55.652 115 42 1 68 173 877 991 5.14e-35 130
MsG0780036470.01.T01 MTR_1g088730 55.652 115 42 1 68 173 907 1021 9.65e-35 129
MsG0780036470.01.T01 MTR_1g088750 54.310 116 44 1 67 173 912 1027 3.81e-34 127
MsG0780036470.01.T01 MTR_1g088750 54.310 116 44 1 67 173 863 978 3.83e-34 127
MsG0780036470.01.T01 MTR_8g099065 62.887 97 35 1 72 168 522 617 3.64e-33 124
MsG0780036470.01.T01 MTR_8g099065 62.887 97 35 1 72 168 522 617 3.79e-33 124
MsG0780036470.01.T01 MTR_6g033740 60.825 97 37 1 72 168 488 583 9.05e-31 117
MsG0780036470.01.T01 MTR_5g009840 59.794 97 38 1 72 168 504 599 2.30e-30 116
MsG0780036470.01.T01 MTR_1g101870 56.863 102 44 0 67 168 540 641 2.54e-29 113
MsG0780036470.01.T01 MTR_1g101870 56.863 102 44 0 67 168 488 589 3.20e-29 113
MsG0780036470.01.T01 MTR_1g099470 55.670 97 43 0 72 168 422 518 9.61e-29 112
MsG0780036470.01.T01 MTR_1g099480 52.941 102 48 0 67 168 451 552 3.87e-28 110
MsG0780036470.01.T01 MTR_1g099480 52.941 102 48 0 67 168 451 552 4.64e-28 110
MsG0780036470.01.T01 MTR_7g075520 51.456 103 44 2 75 173 199 299 8.52e-27 105
MsG0780036470.01.T01 MTR_4g096870 44.144 111 59 2 63 173 99 206 5.93e-24 97.1
MsG0780036470.01.T01 MTR_6g023875 45.918 98 50 2 72 169 371 465 2.42e-21 90.9
MsG0780036470.01.T01 MTR_4g011810 46.667 90 46 1 84 173 242 329 4.53e-21 89.7
MsG0780036470.01.T01 MTR_6g023855 50.575 87 41 1 83 169 245 329 4.84e-21 89.7
MsG0780036470.01.T01 MTR_4g053350 47.126 87 44 1 83 169 126 210 1.06e-20 88.6
MsG0780036470.01.T01 MTR_4g053350 47.126 87 44 1 83 169 126 210 1.09e-20 88.6
MsG0780036470.01.T01 MTR_2g086160 45.977 87 45 1 83 169 131 215 1.15e-20 87.8
MsG0780036470.01.T01 MTR_2g086160 45.977 87 45 1 83 169 131 215 3.16e-20 87.0
MsG0780036470.01.T01 MTR_6g023865 49.425 87 42 1 83 169 157 241 6.56e-20 86.3
MsG0780036470.01.T01 MTR_7g101870 48.780 82 41 1 86 167 481 561 6.13e-19 84.0
MsG0780036470.01.T01 MTR_7g101870 44.828 87 43 2 83 167 205 288 2.32e-16 76.3
MsG0780036470.01.T01 MTR_1g063380 47.059 85 44 1 83 167 477 560 8.02e-19 83.6
MsG0780036470.01.T01 MTR_1g063380 44.086 93 46 3 78 167 198 287 1.48e-16 77.0
MsG0780036470.01.T01 MTR_2g095320 47.059 85 44 1 83 167 420 503 1.68e-18 82.4
MsG0780036470.01.T01 MTR_2g095320 41.379 87 42 3 83 167 152 231 5.17e-12 63.9
MsG0780036470.01.T01 MTR_2g095210 47.059 85 44 1 83 167 405 488 1.95e-18 82.4
MsG0780036470.01.T01 MTR_2g095210 43.333 90 49 2 83 171 206 294 7.40e-15 72.0
MsG0780036470.01.T01 MTR_3g062510 46.237 93 45 2 83 173 158 247 2.51e-18 81.3
MsG0780036470.01.T01 MTR_3g062510 46.237 93 45 2 83 173 158 247 3.04e-18 81.3
MsG0780036470.01.T01 MTR_7g089290 40.367 109 63 1 60 168 643 749 8.41e-18 80.5
MsG0780036470.01.T01 MTR_7g089290 40.367 109 63 1 60 168 615 721 8.54e-18 80.5
MsG0780036470.01.T01 MTR_4g094270 43.678 87 48 1 83 169 155 240 2.77e-17 78.6
MsG0780036470.01.T01 MTR_3g112260 37.190 121 74 2 49 169 102 220 5.52e-17 77.8
MsG0780036470.01.T01 MTR_7g099640 48.235 85 41 2 86 169 189 271 1.79e-16 76.6
MsG0780036470.01.T01 MTR_1g069105 48.235 85 41 2 86 169 190 272 1.81e-16 76.6
MsG0780036470.01.T01 MTR_3g117230 41.000 100 58 1 70 169 125 223 1.84e-16 76.3
MsG0780036470.01.T01 MTR_7g099640 48.235 85 41 2 86 169 189 271 1.87e-16 76.3
MsG0780036470.01.T01 MTR_1g069105 47.619 84 43 1 86 169 190 272 1.91e-16 76.3
MsG0780036470.01.T01 MTR_1g095660 43.182 88 47 2 83 169 117 202 8.69e-16 74.3
MsG0780036470.01.T01 MTR_1g083330 44.186 86 45 2 85 169 168 251 3.25e-15 72.8
MsG0780036470.01.T01 MTR_4g033235 44.186 86 45 2 85 169 169 252 3.32e-15 72.8
MsG0780036470.01.T01 MTR_4g112600 46.341 82 38 3 87 165 3 81 3.33e-15 67.8
MsG0780036470.01.T01 MTR_7g088830 39.080 87 48 2 84 168 658 741 2.30e-14 70.9
MsG0780036470.01.T01 MTR_7g089040 39.080 87 48 2 84 168 685 768 6.71e-14 69.3
MsG0780036470.01.T01 MTR_3g023900 34.884 86 55 1 83 168 530 614 1.14e-13 68.6
MsG0780036470.01.T01 MTR_2g007010 32.941 85 56 1 83 167 527 610 1.74e-13 68.2
MsG0780036470.01.T01 MTR_4g067100 41.414 99 50 3 77 168 371 468 1.81e-13 68.2
MsG0780036470.01.T01 MTR_4g067100 41.414 99 50 3 77 168 371 468 1.81e-13 68.2
MsG0780036470.01.T01 MTR_7g088850 39.286 84 50 1 84 167 282 364 5.97e-12 63.5
MsG0780036470.01.T01 MTR_4g094662 44.444 81 43 2 84 164 229 307 9.09e-12 63.2
MsG0780036470.01.T01 MTR_2g438140 43.373 83 41 3 84 164 286 364 1.83e-11 62.0
MsG0780036470.01.T01 MTR_2g438140 44.444 81 43 2 84 164 226 304 2.02e-11 62.0
MsG0780036470.01.T01 MTR_3g023890 39.535 86 49 3 83 167 384 467 3.78e-11 61.2
MsG0780036470.01.T01 MTR_3g096000 41.237 97 55 2 84 180 296 390 6.50e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780036470.01.T01 AT4G27680 66.857 175 31 4 6 173 16 170 3.78e-69 215
MsG0780036470.01.T01 AT5G53540 61.714 175 40 4 6 173 19 173 2.10e-61 196
MsG0780036470.01.T01 AT4G02480 56.034 116 42 1 67 173 934 1049 1.43e-36 134
MsG0780036470.01.T01 AT1G02890 55.172 116 43 1 67 173 915 1030 2.69e-35 130
MsG0780036470.01.T01 AT3G19740 62.245 98 37 0 76 173 693 790 5.16e-35 130
MsG0780036470.01.T01 AT4G24860 62.626 99 37 0 75 173 808 906 1.30e-34 129
MsG0780036470.01.T01 AT4G24860 62.626 99 37 0 75 173 806 904 1.32e-34 129
MsG0780036470.01.T01 AT4G24860 62.626 99 37 0 75 173 781 879 1.39e-34 129
MsG0780036470.01.T01 AT4G24860 62.626 99 37 0 75 173 804 902 1.39e-34 129
MsG0780036470.01.T01 AT1G50140 60.204 98 39 0 76 173 681 778 1.27e-33 126
MsG0780036470.01.T01 AT1G50140 60.204 98 39 0 76 173 681 778 1.27e-33 126
MsG0780036470.01.T01 AT1G50140 60.204 98 39 0 76 173 703 800 1.31e-33 125
MsG0780036470.01.T01 AT1G50140 60.204 98 39 0 76 173 703 800 1.31e-33 125
MsG0780036470.01.T01 AT1G50140 60.204 98 39 0 76 173 703 800 1.31e-33 125
MsG0780036470.01.T01 AT1G64110 61.856 97 36 1 72 168 506 601 1.23e-32 123
MsG0780036470.01.T01 AT1G64110 61.856 97 36 1 72 168 506 601 1.23e-32 123
MsG0780036470.01.T01 AT1G64110 61.856 97 36 1 72 168 504 599 1.24e-32 123
MsG0780036470.01.T01 AT1G64110 61.856 97 36 1 72 168 504 599 1.24e-32 123
MsG0780036470.01.T01 AT1G64110 61.856 97 36 1 72 168 501 596 1.25e-32 123
MsG0780036470.01.T01 AT1G02890 55.769 104 37 1 67 161 915 1018 4.53e-30 115
MsG0780036470.01.T01 AT5G52882 59.794 97 38 1 72 168 502 597 5.74e-30 115
MsG0780036470.01.T01 AT4G28000 58.763 97 39 1 72 168 505 600 5.87e-30 115
MsG0780036470.01.T01 AT4G28000 58.763 97 39 1 72 168 503 598 5.97e-30 115
MsG0780036470.01.T01 AT4G28000 58.763 97 39 1 72 168 505 600 6.27e-30 115
MsG0780036470.01.T01 AT1G62130 50.000 112 46 2 68 173 721 828 1.54e-27 108
MsG0780036470.01.T01 AT1G62130 50.000 112 46 2 68 173 728 835 1.73e-27 108
MsG0780036470.01.T01 AT2G45500 51.456 103 44 2 75 173 67 167 5.61e-26 102
MsG0780036470.01.T01 AT2G45500 51.456 103 44 2 75 173 67 167 5.61e-26 102
MsG0780036470.01.T01 AT2G45500 51.456 103 44 2 75 173 200 300 1.74e-25 102
MsG0780036470.01.T01 AT2G45500 51.456 103 44 2 75 173 210 310 1.98e-25 102
MsG0780036470.01.T01 AT2G45500 51.456 103 44 2 75 173 204 304 1.98e-25 102
MsG0780036470.01.T01 AT2G34560 46.667 105 49 3 67 169 93 192 4.94e-23 94.7
MsG0780036470.01.T01 AT2G34560 46.667 105 49 3 67 169 84 183 4.95e-23 94.7
MsG0780036470.01.T01 AT3G27120 46.939 98 49 2 72 169 389 483 8.61e-22 92.0
MsG0780036470.01.T01 AT1G80350 46.667 90 46 1 84 173 236 323 3.22e-21 90.1
MsG0780036470.01.T01 AT2G27600 48.276 87 43 2 83 169 128 212 7.46e-20 86.3
MsG0780036470.01.T01 AT5G03340 48.235 85 43 1 83 167 476 559 4.50e-19 84.3
MsG0780036470.01.T01 AT5G03340 44.828 87 43 2 83 167 203 286 2.29e-16 76.6
MsG0780036470.01.T01 AT3G09840 48.235 85 43 1 83 167 476 559 5.61e-19 84.0
MsG0780036470.01.T01 AT3G09840 45.977 87 42 2 83 167 203 286 5.70e-17 78.2
MsG0780036470.01.T01 AT3G53230 47.059 85 44 1 83 167 477 560 1.07e-18 83.2
MsG0780036470.01.T01 AT3G53230 44.828 87 43 2 83 167 204 287 2.70e-16 76.3
MsG0780036470.01.T01 AT1G03000 47.674 86 43 1 83 168 654 737 2.00e-18 82.4
MsG0780036470.01.T01 AT5G58290 46.237 93 45 2 83 173 151 240 2.33e-18 81.6
MsG0780036470.01.T01 AT5G19990 43.678 87 48 1 83 169 157 242 3.31e-17 78.6
MsG0780036470.01.T01 AT5G19990 43.678 87 48 1 83 169 157 242 3.31e-17 78.6
MsG0780036470.01.T01 AT5G19990 43.678 87 48 1 83 169 99 184 3.44e-17 78.2
MsG0780036470.01.T01 AT5G20000 43.678 87 48 1 83 169 157 242 3.58e-17 78.6
MsG0780036470.01.T01 AT2G20140 49.412 85 40 2 86 169 187 269 5.90e-17 77.8
MsG0780036470.01.T01 AT4G29040 49.412 85 40 2 86 169 187 269 6.26e-17 77.8
MsG0780036470.01.T01 AT1G45000 37.190 121 74 2 49 169 102 220 1.09e-16 76.6
MsG0780036470.01.T01 AT5G43010 37.190 121 74 2 49 169 102 220 1.23e-16 77.0
MsG0780036470.01.T01 AT1G45000 37.190 121 74 2 49 169 102 220 1.38e-16 76.6
MsG0780036470.01.T01 AT1G53750 43.182 88 47 2 83 169 164 249 1.63e-15 73.9
MsG0780036470.01.T01 AT3G05530 44.186 86 45 2 85 169 169 252 3.35e-15 72.8
MsG0780036470.01.T01 AT1G09100 44.186 86 45 2 85 169 168 251 3.54e-15 72.8
MsG0780036470.01.T01 AT1G53780 41.573 89 47 2 83 169 357 442 8.64e-15 72.0
MsG0780036470.01.T01 AT1G53780 41.573 89 47 2 83 169 335 420 8.99e-15 71.6
MsG0780036470.01.T01 AT1G53780 41.573 89 47 2 83 169 336 421 9.35e-15 71.6
MsG0780036470.01.T01 AT1G53780 41.573 89 47 2 83 169 336 421 9.35e-15 71.6
MsG0780036470.01.T01 AT3G56690 37.931 87 49 2 84 168 721 804 4.80e-13 67.0
MsG0780036470.01.T01 AT1G05910 39.560 91 49 2 83 168 377 466 7.39e-13 66.2
MsG0780036470.01.T01 AT1G06430 44.444 81 43 2 84 164 217 295 1.47e-11 62.4
MsG0780036470.01.T01 AT1G06430 44.444 81 43 2 84 164 217 295 1.47e-11 62.4
MsG0780036470.01.T01 AT1G06430 44.444 81 43 2 84 164 217 295 1.47e-11 62.4
MsG0780036470.01.T01 AT2G30950 44.444 81 43 2 84 164 228 306 1.74e-11 62.4
MsG0780036470.01.T01 AT2G30950 44.444 81 43 2 84 164 224 302 1.75e-11 62.4
MsG0780036470.01.T01 AT2G30950 44.444 81 43 2 84 164 224 302 1.75e-11 62.4
MsG0780036470.01.T01 AT2G30950 44.444 81 43 2 84 164 224 302 1.75e-11 62.4

Find 54 sgRNAs with CRISPR-Local

Find 297 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGCGCCCTTTATTGTTTAC+AGG 0.266729 7:-8605719 MsG0780036470.01.T01:CDS
CTACACACTTACCAAGCTTT+TGG 0.273433 7:+8605407 None:intergenic
CCCCGAACCATTTGCTCATC+AGG 0.276183 7:+8605434 None:intergenic
TTACATCCTGTAAACAATAA+AGG 0.282430 7:+8605713 None:intergenic
ACCTGATGAGCAAATGGTTC+GGG 0.335944 7:-8605435 MsG0780036470.01.T01:CDS
AATGGTTACCTCATAGGAAT+TGG 0.349196 7:+8609691 None:intergenic
AAAACAAGTCTGGTCGTTGC+AGG 0.370845 7:+8605587 None:intergenic
TCTCCGATGATTCACGGTTC+AGG 0.373936 7:+8609758 None:intergenic
TTGTATGGACCTCCTGGCAC+TGG 0.386661 7:-8605526 MsG0780036470.01.T01:CDS
GGCGGCGCTGTACTGCGCTT+TGG 0.390801 7:-8609797 MsG0780036470.01.T01:CDS
CTGTACTGCGCTTTGGTCAC+GGG 0.392532 7:-8609790 MsG0780036470.01.T01:CDS
CAAACTTCTTGGACCACAAA+AGG 0.392804 7:-8605557 MsG0780036470.01.T01:CDS
GATGTAGAATTTGACTCTAT+TGG 0.395873 7:-8605658 MsG0780036470.01.T01:CDS
GCTGTACTGCGCTTTGGTCA+CGG 0.403471 7:-8609791 MsG0780036470.01.T01:CDS
TACATCCTGTAAACAATAAA+GGG 0.403514 7:+8605714 None:intergenic
TGAAATTTGAAGTTAAAAGT+TGG 0.410149 7:+8609872 None:intergenic
TAGCCTTCTCCGATGATTCA+CGG 0.417840 7:+8609752 None:intergenic
GTCCTGTTGTATGGACCTCC+TGG 0.427197 7:-8605532 MsG0780036470.01.T01:CDS
CTTCTTTCGTTCAAAGGACA+TGG 0.428545 7:-8609842 MsG0780036470.01.T01:exon
GTATCCAACCACCGAATTTG+TGG 0.435521 7:+8609908 None:intergenic
AAACTTCTTGGACCACAAAA+GGG 0.435723 7:-8605556 MsG0780036470.01.T01:CDS
AACCTGATGAGCAAATGGTT+CGG 0.439930 7:-8605436 MsG0780036470.01.T01:CDS
TCTTACGCAGACCACAAATT+CGG 0.451295 7:-8609919 MsG0780036470.01.T01:five_prime_UTR
AGTGTTGTCGTACGCGGCTA+AGG 0.453175 7:-8609818 MsG0780036470.01.T01:CDS
TGCCAGGAGGTCCATACAAC+AGG 0.457002 7:+8605530 None:intergenic
TTGTTCCTTCTTTCGTTCAA+AGG 0.464322 7:-8609848 MsG0780036470.01.T01:five_prime_UTR
GAAAACTGCTCCGGACTCCT+TGG 0.468141 7:+8605477 None:intergenic
AAAGCTATTGCCAAGGAGTC+CGG 0.471305 7:-8605487 MsG0780036470.01.T01:CDS
AATTCTACATCGATGTGGTC+AGG 0.489405 7:+8605670 None:intergenic
TATCAAACCTGATGAGCAAA+TGG 0.495736 7:-8605441 MsG0780036470.01.T01:CDS
ATGATTCACGGTTCAGGTAA+CGG 0.497305 7:+8609764 None:intergenic
TTGCCATGCGAAAACAAGTC+TGG 0.509217 7:+8605577 None:intergenic
GTAGAATTTGACTCTATTGG+TGG 0.512184 7:-8605655 MsG0780036470.01.T01:CDS
CATGTCCTTTGAACGAAAGA+AGG 0.515103 7:+8609843 None:intergenic
TTCGGGGATGCCCAAAAGCT+TGG 0.516170 7:-8605418 MsG0780036470.01.T01:CDS
CACATTAATGAAAACTGCTC+CGG 0.520311 7:+8605468 None:intergenic
TTACCTGAACCGTGAATCAT+CGG 0.528824 7:-8609761 MsG0780036470.01.T01:CDS
AAAGAGATTGCTAAACGTCT+TGG 0.531003 7:-8609730 MsG0780036470.01.T01:CDS
CAGACCACAAATTCGGTGGT+TGG 0.558752 7:-8609912 MsG0780036470.01.T01:five_prime_UTR
TTCTTTCGTTCAAAGGACAT+GGG 0.566698 7:-8609841 MsG0780036470.01.T01:exon
GTTGTCGTACGCGGCTAAGG+CGG 0.569856 7:-8609815 MsG0780036470.01.T01:CDS
AAACAAGTCTGGTCGTTGCA+GGG 0.572120 7:+8605588 None:intergenic
TACGCAGACCACAAATTCGG+TGG 0.589103 7:-8609916 MsG0780036470.01.T01:five_prime_UTR
ACCTCAGAAACTTACGCGAA+AGG 0.600996 7:-8609969 None:intergenic
AACAAGTCTGGTCGTTGCAG+GGG 0.601495 7:+8605589 None:intergenic
AACTTCTTGGACCACAAAAG+GGG 0.602558 7:-8605555 MsG0780036470.01.T01:CDS
TGTATGGACCTCCTGGCACT+GGG 0.603811 7:-8605525 MsG0780036470.01.T01:CDS
GAACCGTGAATCATCGGAGA+AGG 0.605431 7:-8609755 MsG0780036470.01.T01:CDS
TTGTTTACAGGATGTAATAG+CGG 0.608443 7:-8605707 MsG0780036470.01.T01:CDS
CATGGGAGTGTTGTCGTACG+CGG 0.640732 7:-8609824 MsG0780036470.01.T01:CDS
GCTCGCAAAAGCTATTGCCA+AGG 0.654543 7:-8605494 MsG0780036470.01.T01:CDS
ACTTCTTGGACCACAAAAGG+GGG 0.656597 7:-8605554 MsG0780036470.01.T01:CDS
CCTGATGAGCAAATGGTTCG+GGG 0.682531 7:-8605434 MsG0780036470.01.T01:CDS
AGTCAAATTCTACATCGATG+TGG 0.703743 7:+8605665 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAGCTATTAAAATTAATTA+AGG - Chr7:8606317-8606336 MsG0780036470.01.T01:intron 10.0%
!! AATAAAAAGAAAAGTAATAT+TGG + Chr7:8609518-8609537 None:intergenic 10.0%
!! AATAAATGACTAATAAAATA+TGG + Chr7:8607445-8607464 None:intergenic 10.0%
!! ATTAAAATATTGTTTATTGA+TGG + Chr7:8608803-8608822 None:intergenic 10.0%
!! TATTTCCTATATATAATATA+GGG + Chr7:8607751-8607770 None:intergenic 10.0%
!! TTAAAAAAAAAACTTTATGT+TGG - Chr7:8607695-8607714 MsG0780036470.01.T01:intron 10.0%
!! TTAAAGTTTATTTACAATTT+GGG - Chr7:8608159-8608178 MsG0780036470.01.T01:intron 10.0%
!! TTATTTCCTATATATAATAT+AGG + Chr7:8607752-8607771 None:intergenic 10.0%
!! TTGTTTAAGTATATTATTTA+AGG - Chr7:8607292-8607311 MsG0780036470.01.T01:intron 10.0%
!! TTTAAATAAGTAAATAACAA+TGG - Chr7:8607078-8607097 MsG0780036470.01.T01:intron 10.0%
!!! ACAATTTCTTTATTTATTTT+AGG - Chr7:8605803-8605822 MsG0780036470.01.T01:intron 10.0%
!!! ATTAATAGATTTGTTATTTA+AGG - Chr7:8608836-8608855 MsG0780036470.01.T01:intron 10.0%
!!! GTAAATATATATTTTTTGTA+GGG - Chr7:8606288-8606307 MsG0780036470.01.T01:intron 10.0%
!!! TGTAAATATATATTTTTTGT+AGG - Chr7:8606287-8606306 MsG0780036470.01.T01:intron 10.0%
!!! TTTAAAGTTTATTTACAATT+TGG - Chr7:8608158-8608177 MsG0780036470.01.T01:intron 10.0%
!!! TTTAGTAATTTTTTTTAGTA+TGG - Chr7:8607257-8607276 MsG0780036470.01.T01:intron 10.0%
!! ACTAAACTTGAAAATAATAA+GGG - Chr7:8608859-8608878 MsG0780036470.01.T01:intron 15.0%
!! AGAAATCTACAAAAATAAAT+CGG + Chr7:8609544-8609563 None:intergenic 15.0%
!! ATCTCTACTAAATTTAAATT+TGG - Chr7:8605966-8605985 MsG0780036470.01.T01:intron 15.0%
!! GTGTCAAAAAAAATAAATTA+AGG + Chr7:8605757-8605776 None:intergenic 15.0%
!! TCCAAAAATTAAAATGAAAA+AGG + Chr7:8605684-8605703 None:intergenic 15.0%
!! TTTCTTAAATACATTGTTTA+AGG - Chr7:8607231-8607250 MsG0780036470.01.T01:intron 15.0%
!! TTTCTTTATATAAAAGAAGT+TGG + Chr7:8608444-8608463 None:intergenic 15.0%
!!! AACTTTAAAAGAATATAACA+TGG + Chr7:8608529-8608548 None:intergenic 15.0%
!!! ACCTTTTTCATTTTAATTTT+TGG - Chr7:8605680-8605699 MsG0780036470.01.T01:CDS 15.0%
!!! ATGAAAAAGGTATTAAAAAA+TGG + Chr7:8605671-8605690 None:intergenic 15.0%
!!! ATTTTGAGATAATTTTTGTA+CGG + Chr7:8606065-8606084 None:intergenic 15.0%
!!! GAATAGAAAAGTTAAATTTT+AGG + Chr7:8607599-8607618 None:intergenic 15.0%
!!! TAAGTTTTTGAACAATTTTT+TGG - Chr7:8606008-8606027 MsG0780036470.01.T01:intron 15.0%
!!! TTCTTTATTTATTTTAGGAA+GGG - Chr7:8605808-8605827 MsG0780036470.01.T01:intron 15.0%
!!! TTGATGGAATTTTTTTTTTT+AGG + Chr7:8608787-8608806 None:intergenic 15.0%
!!! TTTCTTTATTTATTTTAGGA+AGG - Chr7:8605807-8605826 MsG0780036470.01.T01:intron 15.0%
!! AAATAGTTCAAGATTTGATT+TGG + Chr7:8609215-8609234 None:intergenic 20.0%
!! ACAAAATTATCAACAACAAA+TGG + Chr7:8605714-8605733 None:intergenic 20.0%
!! AGATAAAAGCAACAAAAAAT+TGG + Chr7:8606101-8606120 None:intergenic 20.0%
!! CCTATATATAAGCTAAAAAA+AGG + Chr7:8609395-8609414 None:intergenic 20.0%
!! GACTAAACTTGAAAATAATA+AGG - Chr7:8608858-8608877 MsG0780036470.01.T01:intron 20.0%
!! TATAAGTTTCCAATTCTATA+GGG - Chr7:8606348-8606367 MsG0780036470.01.T01:intron 20.0%
!! TTATAAGTTTCCAATTCTAT+AGG - Chr7:8606347-8606366 MsG0780036470.01.T01:intron 20.0%
!!! AAAACATATTTAACCCTTTT+AGG - Chr7:8606375-8606394 MsG0780036470.01.T01:intron 20.0%
!!! AAAAGGGTTAAATATGTTTT+TGG + Chr7:8606375-8606394 None:intergenic 20.0%
!!! AAACAAACTTTATTTTAGCA+TGG - Chr7:8606252-8606271 MsG0780036470.01.T01:intron 20.0%
!!! AACAAACAAAAAAAGTACAT+TGG - Chr7:8609156-8609175 MsG0780036470.01.T01:intron 20.0%
!!! ACAAACAAAAAAAGTACATT+GGG - Chr7:8609157-8609176 MsG0780036470.01.T01:intron 20.0%
!!! CCTTTTTTTAGCTTATATAT+AGG - Chr7:8609392-8609411 MsG0780036470.01.T01:intron 20.0%
!!! CTATTTTATCTCAACAAAAA+CGG + Chr7:8607780-8607799 None:intergenic 20.0%
!!! GTTTTTGTTGAGATAAAATA+GGG - Chr7:8607779-8607798 MsG0780036470.01.T01:intron 20.0%
!!! TAAGTTTAGAACATTTCAAA+AGG + Chr7:8606198-8606217 None:intergenic 20.0%
!!! TGAAATTTGAAGTTAAAAGT+TGG + Chr7:8605472-8605491 None:intergenic 20.0%
! AAAGATAATAACACTTGACT+AGG + Chr7:8609581-8609600 None:intergenic 25.0%
! AAATAGTTCAAGATTCGATT+TGG + Chr7:8609081-8609100 None:intergenic 25.0%
! AGTTTATTTACAATTTGGGT+TGG - Chr7:8608163-8608182 MsG0780036470.01.T01:intron 25.0%
! ATCGTACAAAAATATGAAGA+AGG - Chr7:8606911-8606930 MsG0780036470.01.T01:intron 25.0%
! CAGAACCCTATATTATATAT+AGG - Chr7:8607743-8607762 MsG0780036470.01.T01:intron 25.0%
! GCTTGTTTGACATAAATAAA+AGG + Chr7:8606889-8606908 None:intergenic 25.0%
! GTAGATTTCTGTGAAAATAT+TGG - Chr7:8609554-8609573 MsG0780036470.01.T01:intron 25.0%
! TACATCCTGTAAACAATAAA+GGG + Chr7:8609630-8609649 None:intergenic 25.0%
! TTAAAAAATGGTTACCTCAT+AGG + Chr7:8605659-8605678 None:intergenic 25.0%
! TTACATCCTGTAAACAATAA+AGG + Chr7:8609631-8609650 None:intergenic 25.0%
!! ATAATGGAATAAAATGGTGT+TGG + Chr7:8608707-8608726 None:intergenic 25.0%
!! ATAGGAATTGGTTTCAAAAA+AGG + Chr7:8605641-8605660 None:intergenic 25.0%
!! ATTTAAAGCAAAGCTTTGTA+TGG + Chr7:8607968-8607987 None:intergenic 25.0%
!! CGTTTTTGTTGAGATAAAAT+AGG - Chr7:8607778-8607797 MsG0780036470.01.T01:intron 25.0%
!! GAAATGTTCTAAACTTATCT+CGG - Chr7:8606201-8606220 MsG0780036470.01.T01:intron 25.0%
!! GCAGTGAAATAATAACATTT+TGG - Chr7:8609343-8609362 MsG0780036470.01.T01:intron 25.0%
!!! ATCTTGAACTATTTTTGAGT+TGG - Chr7:8609087-8609106 MsG0780036470.01.T01:intron 25.0%
!!! CTGAGTGCATAATTTTTTTA+AGG + Chr7:8605941-8605960 None:intergenic 25.0%
!!! TATTTAACGAGCTTAGTTTT+CGG - Chr7:8609019-8609038 MsG0780036470.01.T01:intron 25.0%
!!! TCTTTTAAAGTTTTCGATGT+GGG - Chr7:8608537-8608556 MsG0780036470.01.T01:intron 25.0%
!!! TTCTTTTAAAGTTTTCGATG+TGG - Chr7:8608536-8608555 MsG0780036470.01.T01:intron 25.0%
AATCAGATCTGAAAAAAGTG+TGG - Chr7:8606935-8606954 MsG0780036470.01.T01:intron 30.0%
ACAAAAAACACCAATACACT+AGG - Chr7:8608410-8608429 MsG0780036470.01.T01:intron 30.0%
ACATATGCTCATTCCTAAAA+GGG + Chr7:8606391-8606410 None:intergenic 30.0%
AGTGTATTCTTGATTGGATT+GGG - Chr7:8607016-8607035 MsG0780036470.01.T01:intron 30.0%
ATAGCCTTTAAATACCAGTA+CGG + Chr7:8609426-8609445 None:intergenic 30.0%
ATATAATATAGGGTTCTGCA+TGG + Chr7:8607741-8607760 None:intergenic 30.0%
ATATGCTATATGTTGCATGA+TGG - Chr7:8608900-8608919 MsG0780036470.01.T01:intron 30.0%
ATGAAATTGCTCTATTTGGT+AGG + Chr7:8608680-8608699 None:intergenic 30.0%
GAAAGATTGATTAGAGATCT+GGG - Chr7:8606828-8606847 MsG0780036470.01.T01:intron 30.0%
GATGTAGAATTTGACTCTAT+TGG - Chr7:8609683-8609702 MsG0780036470.01.T01:intron 30.0%
GGTAATTAATTCGTTGAACT+TGG + Chr7:8609060-8609079 None:intergenic 30.0%
TAGTGTATTCTTGATTGGAT+TGG - Chr7:8607015-8607034 MsG0780036470.01.T01:intron 30.0%
TATGTGTAGTTTGACTCATT+TGG + Chr7:8608981-8609000 None:intergenic 30.0%
TGAAAGATTGATTAGAGATC+TGG - Chr7:8606827-8606846 MsG0780036470.01.T01:intron 30.0%
TGAGATGAAATTGCTCTATT+TGG + Chr7:8608684-8608703 None:intergenic 30.0%
TGTAAGCTAATGTCATTGTT+GGG + Chr7:8607055-8607074 None:intergenic 30.0%
TTGTATGATAGATTAGCAAG+CGG + Chr7:8608624-8608643 None:intergenic 30.0%
TTGTTTACAGGATGTAATAG+CGG - Chr7:8609634-8609653 MsG0780036470.01.T01:intron 30.0%
TTTGCTCTGTTGTAAAATCT+TGG - Chr7:8606734-8606753 MsG0780036470.01.T01:intron 30.0%
! AGAAATTAATGAGAGAGCAT+TGG - Chr7:8608459-8608478 MsG0780036470.01.T01:intron 30.0%
! GGAGGAATAATGGAATAAAA+TGG + Chr7:8608713-8608732 None:intergenic 30.0%
! TTGAGATAATTTTTGTACGG+AGG + Chr7:8606062-8606081 None:intergenic 30.0%
!! TTCATTTTGACCGTGAAAAA+AGG + Chr7:8606791-8606810 None:intergenic 30.0%
!! TTTTAGGAATGAGCATATGT+CGG - Chr7:8606391-8606410 MsG0780036470.01.T01:intron 30.0%
!!! GAACTATTTTTGAGTTGGAT+TGG - Chr7:8609092-8609111 MsG0780036470.01.T01:intron 30.0%
!!! TGTGTTGATTTTGTAGTTTC+AGG + Chr7:8608743-8608762 None:intergenic 30.0%
!!! TTCAGTTTTCATTGGTTTGA+CGG + Chr7:8606431-8606450 None:intergenic 30.0%
!!! TTTTGAAACCAATTCCTATG+AGG - Chr7:8605642-8605661 MsG0780036470.01.T01:CDS 30.0%
AAACTTCTTGGACCACAAAA+GGG - Chr7:8609785-8609804 MsG0780036470.01.T01:CDS 35.0%
AAAGAGATTGCTAAACGTCT+TGG - Chr7:8605611-8605630 MsG0780036470.01.T01:CDS 35.0%
AAGCATAAAACCATCCTATG+CGG - Chr7:8609449-8609468 MsG0780036470.01.T01:intron 35.0%
AAGTTGCATAGAGCAACAAA+AGG - Chr7:8607642-8607661 MsG0780036470.01.T01:intron 35.0%
AATGGTTACCTCATAGGAAT+TGG + Chr7:8605653-8605672 None:intergenic 35.0%
ACGGTCAAAATGAAGAAGAA+GGG - Chr7:8606797-8606816 MsG0780036470.01.T01:intron 35.0%
AGCATTAAAGCAGCCATTTA+AGG - Chr7:8607810-8607829 MsG0780036470.01.T01:intron 35.0%
AGTACATTGGGTAGTTAAGA+AGG - Chr7:8609303-8609322 MsG0780036470.01.T01:intron 35.0%
AGTCAAATTCTACATCGATG+TGG + Chr7:8609679-8609698 None:intergenic 35.0%
ATCTCATAACTAGAGCAACT+CGG - Chr7:8608213-8608232 MsG0780036470.01.T01:intron 35.0%
ATTAGTCGTTCCTTATGCAT+AGG - Chr7:8608025-8608044 MsG0780036470.01.T01:intron 35.0%
CACATTAATGAAAACTGCTC+CGG + Chr7:8609876-8609895 None:intergenic 35.0%
CTGTAAGCTAATGTCATTGT+TGG + Chr7:8607056-8607075 None:intergenic 35.0%
GACATATGCTCATTCCTAAA+AGG + Chr7:8606392-8606411 None:intergenic 35.0%
GCAGATTTCATAACACACTT+TGG + Chr7:8608572-8608591 None:intergenic 35.0%
GGAGATAAGTTAGCATAGAA+TGG + Chr7:8609497-8609516 None:intergenic 35.0%
GTAATTAGGCCTAGAATTAG+TGG + Chr7:8606462-8606481 None:intergenic 35.0%
GTAGAATTTGACTCTATTGG+TGG - Chr7:8609686-8609705 MsG0780036470.01.T01:intron 35.0%
TATCAAACCTGATGAGCAAA+TGG - Chr7:8609900-8609919 MsG0780036470.01.T01:five_prime_UTR 35.0%
TGAATTTGAGTCAAGCTTCT+AGG + Chr7:8608258-8608277 None:intergenic 35.0%
TGGACTAACCCCATAAAAAT+TGG + Chr7:8607948-8607967 None:intergenic 35.0%
TTAAATACCAGTACGGAACA+TGG + Chr7:8609419-8609438 None:intergenic 35.0%
TTAGTCGTTCCTTATGCATA+GGG - Chr7:8608026-8608045 MsG0780036470.01.T01:intron 35.0%
TTCTTTCGTTCAAAGGACAT+GGG - Chr7:8605500-8605519 MsG0780036470.01.T01:CDS 35.0%
TTGTTCCTTCTTTCGTTCAA+AGG - Chr7:8605493-8605512 MsG0780036470.01.T01:CDS 35.0%
! AGATCTGAAATGAGACAGTA+GGG - Chr7:8606985-8607004 MsG0780036470.01.T01:intron 35.0%
! AGCGGATACAATTTTCTTGA+AGG + Chr7:8608606-8608625 None:intergenic 35.0%
! AGGGTTAGTGTATTCTTGAT+TGG - Chr7:8607010-8607029 MsG0780036470.01.T01:intron 35.0%
! ATTATTAACGAGCTGACTCA+TGG - Chr7:8608954-8608973 MsG0780036470.01.T01:intron 35.0%
! GCGGATACAATTTTCTTGAA+GGG + Chr7:8608605-8608624 None:intergenic 35.0%
! TACACACTTACCAAGCTTTT+GGG + Chr7:8609936-8609955 None:intergenic 35.0%
! TGTTCCGTACTGGTATTTAA+AGG - Chr7:8609419-8609438 MsG0780036470.01.T01:intron 35.0%
! TTTGTAGTTTCAGGTGTGAA+GGG + Chr7:8608734-8608753 None:intergenic 35.0%
!! TTTTGTAGTTTCAGGTGTGA+AGG + Chr7:8608735-8608754 None:intergenic 35.0%
!!! GTTTTTGGTCCCTATAGAAT+TGG + Chr7:8606360-8606379 None:intergenic 35.0%
!!! TGGTTTTATTCAAAAGCTCC+AGG + Chr7:8609477-8609496 None:intergenic 35.0%
!!! TTGGTTTTGAGACAAGTTGT+AGG - Chr7:8607714-8607733 MsG0780036470.01.T01:intron 35.0%
AACCCCATAAAAATTGGCAC+CGG + Chr7:8607942-8607961 None:intergenic 40.0%
AACCTGATGAGCAAATGGTT+CGG - Chr7:8609905-8609924 MsG0780036470.01.T01:five_prime_UTR 40.0%
AACTTCTTGGACCACAAAAG+GGG - Chr7:8609786-8609805 MsG0780036470.01.T01:CDS 40.0%
AATTCTACATCGATGTGGTC+AGG + Chr7:8609674-8609693 None:intergenic 40.0%
ACTCGATGTCTAGTCTAAGT+AGG + Chr7:8609130-8609149 None:intergenic 40.0%
AGCATAAAACCATCCTATGC+GGG - Chr7:8609450-8609469 MsG0780036470.01.T01:intron 40.0%
ATAAGGAACGACTAATCCAG+GGG + Chr7:8608021-8608040 None:intergenic 40.0%
ATGATTCACGGTTCAGGTAA+CGG + Chr7:8605580-8605599 None:intergenic 40.0%
ATTAGGCCTAGAATTAGTGG+CGG + Chr7:8606459-8606478 None:intergenic 40.0%
ATTGCTCTATTTGGTAGGCA+TGG + Chr7:8608675-8608694 None:intergenic 40.0%
CAAACTTCTTGGACCACAAA+AGG - Chr7:8609784-8609803 MsG0780036470.01.T01:CDS 40.0%
CACGGTCAAAATGAAGAAGA+AGG - Chr7:8606796-8606815 MsG0780036470.01.T01:intron 40.0%
CATAAGGAACGACTAATCCA+GGG + Chr7:8608022-8608041 None:intergenic 40.0%
CATATCTCTGTTGTCAAACG+CGG - Chr7:8606554-8606573 MsG0780036470.01.T01:intron 40.0%
CATGTCCTTTGAACGAAAGA+AGG + Chr7:8605501-8605520 None:intergenic 40.0%
CGGTCAAAATGAAGAAGAAG+GGG - Chr7:8606798-8606817 MsG0780036470.01.T01:intron 40.0%
CTCGATGTCTAGTCTAAGTA+GGG + Chr7:8609129-8609148 None:intergenic 40.0%
CTTCTTTCGTTCAAAGGACA+TGG - Chr7:8605499-8605518 MsG0780036470.01.T01:CDS 40.0%
CTTTAAATGACCCTCTGCTA+GGG - Chr7:8607980-8607999 MsG0780036470.01.T01:intron 40.0%
GAAATGAGACAGTAGGGTTA+GGG - Chr7:8606991-8607010 MsG0780036470.01.T01:intron 40.0%
TCATTTCAGCCCTATGCATA+AGG + Chr7:8608038-8608057 None:intergenic 40.0%
TCTTACGCAGACCACAAATT+CGG - Chr7:8605422-8605441 MsG0780036470.01.T01:CDS 40.0%
TGAAATGAGACAGTAGGGTT+AGG - Chr7:8606990-8607009 MsG0780036470.01.T01:intron 40.0%
TTACCTGAACCGTGAATCAT+CGG - Chr7:8605580-8605599 MsG0780036470.01.T01:CDS 40.0%
TTGCGCCCTTTATTGTTTAC+AGG - Chr7:8609622-8609641 MsG0780036470.01.T01:intron 40.0%
TTTAAATGACCCTCTGCTAG+GGG - Chr7:8607981-8608000 MsG0780036470.01.T01:intron 40.0%
! ATGTAGCTCTGTTGTCAAAG+CGG + Chr7:8607564-8607583 None:intergenic 40.0%
! CAGATCTGAAAAAAGTGTGG+CGG - Chr7:8606938-8606957 MsG0780036470.01.T01:intron 40.0%
! CAGATCTGAAATGAGACAGT+AGG - Chr7:8606984-8607003 MsG0780036470.01.T01:intron 40.0%
! CGACTTGATAAGGATTTGCT+TGG - Chr7:8608079-8608098 MsG0780036470.01.T01:intron 40.0%
! CGGCAGTTTTCAGTTTTCAT+TGG + Chr7:8606439-8606458 None:intergenic 40.0%
! CTACACACTTACCAAGCTTT+TGG + Chr7:8609937-8609956 None:intergenic 40.0%
! CTTGATTGGATTGGGTCATT+GGG - Chr7:8607024-8607043 MsG0780036470.01.T01:intron 40.0%
! GATTTGCTTGGCTTGAAACT+CGG - Chr7:8608091-8608110 MsG0780036470.01.T01:intron 40.0%
! TCTTGATTGGATTGGGTCAT+TGG - Chr7:8607023-8607042 MsG0780036470.01.T01:intron 40.0%
! TTTTCGCATGGCAAACTTCT+TGG - Chr7:8609773-8609792 MsG0780036470.01.T01:CDS 40.0%
!! ACAATTTGGGTTGGCTTGTT+AGG - Chr7:8608172-8608191 MsG0780036470.01.T01:intron 40.0%
!! GAATGAGCATATGTCGGTTT+GGG - Chr7:8606397-8606416 MsG0780036470.01.T01:intron 40.0%
!!! GCATAGGATGGTTTTATGCT+TGG + Chr7:8609450-8609469 None:intergenic 40.0%
!!! TCTTCGTCGTCCTTTTTTCA+CGG - Chr7:8606778-8606797 MsG0780036470.01.T01:intron 40.0%
AAAACAAGTCTGGTCGTTGC+AGG + Chr7:8609757-8609776 None:intergenic 45.0%
AAACAAGTCTGGTCGTTGCA+GGG + Chr7:8609756-8609775 None:intergenic 45.0%
AAACTGCCGCCACTAATTCT+AGG - Chr7:8606450-8606469 MsG0780036470.01.T01:intron 45.0%
AAAGCTATTGCCAAGGAGTC+CGG - Chr7:8609854-8609873 MsG0780036470.01.T01:five_prime_UTR 45.0%
AAAGGACGACGAAGAGAGAA+CGG + Chr7:8606773-8606792 None:intergenic 45.0%
ACAAGCACGGGTAAGTACAT+TGG - Chr7:8607833-8607852 MsG0780036470.01.T01:intron 45.0%
ACCTGATGAGCAAATGGTTC+GGG - Chr7:8609906-8609925 MsG0780036470.01.T01:five_prime_UTR 45.0%
ACTTCTTGGACCACAAAAGG+GGG - Chr7:8609787-8609806 MsG0780036470.01.T01:CDS 45.0%
AGCCATTTAAGGACAAGCAC+GGG - Chr7:8607821-8607840 MsG0780036470.01.T01:intron 45.0%
AGGCATGGTGGTATGAGATA+AGG + Chr7:8608660-8608679 None:intergenic 45.0%
AGGTGTGAAGGGAGGAATAA+TGG + Chr7:8608723-8608742 None:intergenic 45.0%
ATGTCTAGTCTAAGTAGGGC+TGG + Chr7:8609125-8609144 None:intergenic 45.0%
CAAGCACGGGTAAGTACATT+GGG - Chr7:8607834-8607853 MsG0780036470.01.T01:intron 45.0%
CAGCCATTTAAGGACAAGCA+CGG - Chr7:8607820-8607839 MsG0780036470.01.T01:intron 45.0%
CTAGGCCTAATTACGACTTG+CGG - Chr7:8606468-8606487 MsG0780036470.01.T01:intron 45.0%
GCATAAGGAACGACTAATCC+AGG + Chr7:8608023-8608042 None:intergenic 45.0%
GGAGCTACAACCTAGTGTAT+TGG + Chr7:8608423-8608442 None:intergenic 45.0%
GTATCCAACCACCGAATTTG+TGG + Chr7:8605436-8605455 None:intergenic 45.0%
TACCCGTGCTTGTCCTTAAA+TGG + Chr7:8607826-8607845 None:intergenic 45.0%
TAGCCTTCTCCGATGATTCA+CGG + Chr7:8605592-8605611 None:intergenic 45.0%
TAGGCCTAATTACGACTTGC+GGG - Chr7:8606469-8606488 MsG0780036470.01.T01:intron 45.0%
TATAGGACCATGTTCCGTAC+TGG - Chr7:8609409-8609428 MsG0780036470.01.T01:intron 45.0%
TTGCCATGCGAAAACAAGTC+TGG + Chr7:8609767-8609786 None:intergenic 45.0%
TTTGAACACGAGACCTTGAG+AGG + Chr7:8607915-8607934 None:intergenic 45.0%
! GCTTTAAATGACCCTCTGCT+AGG - Chr7:8607979-8607998 MsG0780036470.01.T01:intron 45.0%
! GGAATGAGCATATGTCGGTT+TGG - Chr7:8606396-8606415 MsG0780036470.01.T01:intron 45.0%
! TCGAAGAGCTCGACTTGATA+AGG - Chr7:8608069-8608088 MsG0780036470.01.T01:intron 45.0%
!! CCTCCGGTGCCAATTTTTAT+GGG - Chr7:8607936-8607955 MsG0780036470.01.T01:intron 45.0%
!! CTCCGGTGCCAATTTTTATG+GGG - Chr7:8607937-8607956 MsG0780036470.01.T01:intron 45.0%
!! GTAGAATGGGTGGGTTGTTT+CGG - Chr7:8606507-8606526 MsG0780036470.01.T01:intron 45.0%
!! TAGAATGGGTGGGTTGTTTC+GGG - Chr7:8606508-8606527 MsG0780036470.01.T01:intron 45.0%
!! TCCTCCGGTGCCAATTTTTA+TGG - Chr7:8607935-8607954 MsG0780036470.01.T01:intron 45.0%
AACAAGTCTGGTCGTTGCAG+GGG + Chr7:8609755-8609774 None:intergenic 50.0%
ACATTGGGTAGCAACCCACA+TGG - Chr7:8607849-8607868 MsG0780036470.01.T01:intron 50.0%
AGTCACGCGTTTGTGGAAAG+CGG - Chr7:8606641-8606660 MsG0780036470.01.T01:intron 50.0%
ATTCCAATGTCCCCTAGCAG+AGG + Chr7:8607994-8608013 None:intergenic 50.0%
CAAAAGGGGGTCCTGTTGTA+TGG - Chr7:8609800-8609819 MsG0780036470.01.T01:CDS 50.0%
CATTGGGTAGCAACCCACAT+GGG - Chr7:8607850-8607869 MsG0780036470.01.T01:intron 50.0%
CCTGATGAGCAAATGGTTCG+GGG - Chr7:8609907-8609926 MsG0780036470.01.T01:five_prime_UTR 50.0%
CTGCTAGGGGACATTGGAAT+TGG - Chr7:8607994-8608013 MsG0780036470.01.T01:intron 50.0%
CTGTTGTCAAAGCGGAAACG+CGG + Chr7:8607556-8607575 None:intergenic 50.0%
CTTTCCACAAACGCGTGACT+TGG + Chr7:8606641-8606660 None:intergenic 50.0%
GAACCGTGAATCATCGGAGA+AGG - Chr7:8605586-8605605 MsG0780036470.01.T01:CDS 50.0%
GCTCGCAAAAGCTATTGCCA+AGG - Chr7:8609847-8609866 MsG0780036470.01.T01:five_prime_UTR 50.0%
GCTCTATTTGGTAGGCATGG+TGG + Chr7:8608672-8608691 None:intergenic 50.0%
GGTCTCGTGTTCAAATCCTC+CGG - Chr7:8607920-8607939 MsG0780036470.01.T01:intron 50.0%
GTCGCGAATACGTTTCTGTG+AGG - Chr7:8606677-8606696 MsG0780036470.01.T01:intron 50.0%
TACGCAGACCACAAATTCGG+TGG - Chr7:8605425-8605444 MsG0780036470.01.T01:CDS 50.0%
TACGTTTCTGTGAGGCAGAG+CGG - Chr7:8606685-8606704 MsG0780036470.01.T01:intron 50.0%
TCTCCGATGATTCACGGTTC+AGG + Chr7:8605586-8605605 None:intergenic 50.0%
TTCCAATGTCCCCTAGCAGA+GGG + Chr7:8607993-8608012 None:intergenic 50.0%
! ACCGCACCGCGTCAATTTTT+GGG - Chr7:8607516-8607535 MsG0780036470.01.T01:intron 50.0%
! CAAAACGCGCTGCTTTGAAC+CGG + Chr7:8606718-8606737 None:intergenic 50.0%
! CAGACCACAAATTCGGTGGT+TGG - Chr7:8605429-8605448 MsG0780036470.01.T01:CDS 50.0%
! CCCATAAAAATTGGCACCGG+AGG + Chr7:8607939-8607958 None:intergenic 50.0%
! CTGAAAAAAGTGTGGCGGCT+GGG - Chr7:8606943-8606962 MsG0780036470.01.T01:intron 50.0%
! GGCAATAGCTTTTGCGAGCA+TGG + Chr7:8609846-8609865 None:intergenic 50.0%
! GTAGTTTCAGGTGTGAAGGG+AGG + Chr7:8608731-8608750 None:intergenic 50.0%
! TACAACAGGACCCCCTTTTG+TGG + Chr7:8609800-8609819 None:intergenic 50.0%
! TACCGCACCGCGTCAATTTT+TGG - Chr7:8607515-8607534 MsG0780036470.01.T01:intron 50.0%
! TCTGAAAAAAGTGTGGCGGC+TGG - Chr7:8606942-8606961 MsG0780036470.01.T01:intron 50.0%
! TTGGATTGGGTCATTGGGCT+AGG - Chr7:8607029-8607048 MsG0780036470.01.T01:intron 50.0%
!! CGACCAGACTTGTTTTCGCA+TGG - Chr7:8609761-8609780 MsG0780036470.01.T01:CDS 50.0%
!! CGAGCTTAGTTTTCGGCTCA+TGG - Chr7:8609026-8609045 MsG0780036470.01.T01:intron 50.0%
!! GACTTGGTAGCGTTGTGATG+CGG + Chr7:8606625-8606644 None:intergenic 50.0%
!!! GTGATGCGGCTCCTTGTTTT+TGG + Chr7:8606611-8606630 None:intergenic 50.0%
AAAAGCTCCAGGTCCCGCAT+AGG + Chr7:8609466-8609485 None:intergenic 55.0%
AAACCATCCTATGCGGGACC+TGG - Chr7:8609456-8609475 MsG0780036470.01.T01:intron 55.0%
ACCCACATGGGCAGACATAG+CGG - Chr7:8607862-8607881 MsG0780036470.01.T01:intron 55.0%
ACCGCTATGTCTGCCCATGT+GGG + Chr7:8607866-8607885 None:intergenic 55.0%
ACGTTTCTGTGAGGCAGAGC+GGG - Chr7:8606686-8606705 MsG0780036470.01.T01:intron 55.0%
AGGTGGCAGGTAGAATGGGT+GGG - Chr7:8606498-8606517 MsG0780036470.01.T01:intron 55.0%
AGTGTTGTCGTACGCGGCTA+AGG - Chr7:8605523-8605542 MsG0780036470.01.T01:CDS 55.0%
ATGGGCAGACATAGCGGTGT+AGG - Chr7:8607868-8607887 MsG0780036470.01.T01:intron 55.0%
CATTCTACCTGCCACCTGTG+CGG + Chr7:8606495-8606514 None:intergenic 55.0%
CCCCAAAAATTGACGCGGTG+CGG + Chr7:8607520-8607539 None:intergenic 55.0%
CCCCGAACCATTTGCTCATC+AGG + Chr7:8609910-8609929 None:intergenic 55.0%
CTGTACTGCGCTTTGGTCAC+GGG - Chr7:8605551-8605570 MsG0780036470.01.T01:CDS 55.0%
CTTGGAGTGTGCTCCTCTCA+AGG - Chr7:8607899-8607918 MsG0780036470.01.T01:intron 55.0%
GAAAACTGCTCCGGACTCCT+TGG + Chr7:8609867-8609886 None:intergenic 55.0%
GCACAGGTGGCAGGTAGAAT+GGG - Chr7:8606494-8606513 MsG0780036470.01.T01:intron 55.0%
GCTACCAAGTCACGCGTTTG+TGG - Chr7:8606634-8606653 MsG0780036470.01.T01:intron 55.0%
GCTGTACTGCGCTTTGGTCA+CGG - Chr7:8605550-8605569 MsG0780036470.01.T01:CDS 55.0%
GGACATTGGAATTGGTCCCC+TGG - Chr7:8608002-8608021 MsG0780036470.01.T01:intron 55.0%
GGCCACCCCAAAAATTGACG+CGG + Chr7:8607525-8607544 None:intergenic 55.0%
GTCACGCGTTTGTGGAAAGC+GGG - Chr7:8606642-8606661 MsG0780036470.01.T01:intron 55.0%
GTCCTGTTGTATGGACCTCC+TGG - Chr7:8609809-8609828 MsG0780036470.01.T01:CDS 55.0%
GTGGAAAGCGGGTCAATAGC+AGG - Chr7:8606653-8606672 MsG0780036470.01.T01:intron 55.0%
TGCCAGGAGGTCCATACAAC+AGG + Chr7:8609814-8609833 None:intergenic 55.0%
TGTATGGACCTCCTGGCACT+GGG - Chr7:8609816-8609835 MsG0780036470.01.T01:CDS 55.0%
TTCGGGGATGCCCAAAAGCT+TGG - Chr7:8609923-8609942 MsG0780036470.01.T01:five_prime_UTR 55.0%
TTGTATGGACCTCCTGGCAC+TGG - Chr7:8609815-8609834 MsG0780036470.01.T01:CDS 55.0%
TTGTCAAACGCGGCTGCTCT+CGG - Chr7:8606564-8606583 MsG0780036470.01.T01:intron 55.0%
! AGCATGGTTTTCCCAGTGCC+AGG + Chr7:8609830-8609849 None:intergenic 55.0%
! ATGGTTTTCCCAGTGCCAGG+AGG + Chr7:8609827-8609846 None:intergenic 55.0%
! CCGCACCGCGTCAATTTTTG+GGG - Chr7:8607517-8607536 MsG0780036470.01.T01:intron 55.0%
! CTTGAGAGGAGCACACTCCA+AGG + Chr7:8607901-8607920 None:intergenic 55.0%
!! CACCGCGTCAATTTTTGGGG+TGG - Chr7:8607520-8607539 MsG0780036470.01.T01:intron 55.0%
!! CATGGGAGTGTTGTCGTACG+CGG - Chr7:8605517-8605536 MsG0780036470.01.T01:CDS 55.0%
AATTGACGCGGTGCGGTACG+CGG + Chr7:8607513-8607532 None:intergenic 60.0%
CACCGCTATGTCTGCCCATG+TGG + Chr7:8607867-8607886 None:intergenic 60.0%
CAGGTGGCAGGTAGAATGGG+TGG - Chr7:8606497-8606516 MsG0780036470.01.T01:intron 60.0%
CGCACAGGTGGCAGGTAGAA+TGG - Chr7:8606493-8606512 MsG0780036470.01.T01:intron 60.0%
GACCCTCTGCTAGGGGACAT+TGG - Chr7:8607988-8608007 MsG0780036470.01.T01:intron 60.0%
GCGGCCCGCAAGTCGTAATT+AGG + Chr7:8606476-8606495 None:intergenic 60.0%
GCGGCTGGGAGAGAGAAAGT+AGG - Chr7:8606957-8606976 MsG0780036470.01.T01:intron 60.0%
GCGGGCGCTATTACATGACG+CGG + Chr7:8607494-8607513 None:intergenic 60.0%
GCGGTGTAGGCTTGAGACCT+TGG - Chr7:8607881-8607900 MsG0780036470.01.T01:intron 60.0%
GTTGTCGTACGCGGCTAAGG+CGG - Chr7:8605526-8605545 MsG0780036470.01.T01:CDS 60.0%
ATTGACGCGGTGCGGTACGC+GGG + Chr7:8607512-8607531 None:intergenic 65.0%
GAGGCAGAGCGGGTCGAAAC+CGG - Chr7:8606696-8606715 MsG0780036470.01.T01:intron 65.0%
GCGCGGAGCGGCCAAAAACA+AGG - Chr7:8606597-8606616 MsG0780036470.01.T01:intron 65.0%
GCTCCAGGTCCCGCATAGGA+TGG + Chr7:8609462-8609481 None:intergenic 65.0%
GTCAAAGCGGAAACGCGGCG+TGG + Chr7:8607551-8607570 None:intergenic 65.0%
TTACGACTTGCGGGCCGCAC+AGG - Chr7:8606478-8606497 MsG0780036470.01.T01:intron 65.0%
CTCTCGGCGCTATCGTGGCG+CGG - Chr7:8606580-8606599 MsG0780036470.01.T01:intron 70.0%
GGCGGCGCTGTACTGCGCTT+TGG - Chr7:8605544-8605563 MsG0780036470.01.T01:CDS 70.0%
GGCTGCTCTCGGCGCTATCG+TGG - Chr7:8606575-8606594 MsG0780036470.01.T01:intron 70.0%
AGCGGAAACGCGGCGTGGCG+CGG + Chr7:8607546-8607565 None:intergenic 75.0%
CGACTTGCGGGCCGCACAGG+TGG - Chr7:8606481-8606500 MsG0780036470.01.T01:intron 75.0%
GGCGCTATCGTGGCGCGGAG+CGG - Chr7:8606585-8606604 MsG0780036470.01.T01:intron 75.0%
TTGCGGGCCGCACAGGTGGC+AGG - Chr7:8606485-8606504 MsG0780036470.01.T01:intron 75.0%
Chromosome Type Strat End Strand Name
Chr7 gene 8605384 8609979 8605384 ID=MsG0780036470.01;Name=MsG0780036470.01
Chr7 mRNA 8605384 8609979 8605384 ID=MsG0780036470.01.T01;Parent=MsG0780036470.01;Name=MsG0780036470.01.T01;_AED=0.46;_eAED=0.50;_QI=134|0|0.5|1|0|0.5|2|0|180
Chr7 exon 8605384 8605780 8605384 ID=MsG0780036470.01.T01:exon:10153;Parent=MsG0780036470.01.T01
Chr7 exon 8609700 8609979 8609700 ID=MsG0780036470.01.T01:exon:10152;Parent=MsG0780036470.01.T01
Chr7 five_prime_UTR 8609846 8609979 8609846 ID=MsG0780036470.01.T01:five_prime_utr;Parent=MsG0780036470.01.T01
Chr7 CDS 8609700 8609845 8609700 ID=MsG0780036470.01.T01:cds;Parent=MsG0780036470.01.T01
Chr7 CDS 8605384 8605780 8605384 ID=MsG0780036470.01.T01:cds;Parent=MsG0780036470.01.T01
Gene Sequence

>MsG0780036470.01.T01

ATGGGAGTGTTGTCGTACGCGGCTAAGGCGGCGCTGTACTGCGCTTTGGTCACGGGTTTCCGTTACCTGAACCGTGAATCATCGGAGAAGGCTAAAGAGATTGCTAAACGTCTTGGTCGTCCTTTTTTGAAACCAATTCCTATGAGTCAAGTGTTATTATCTTTCATTTTAACGTTTAATTTAATTTGCGCCCTTTATTGTTTACAGGATGTAATAGCGGATGATGTTATAAATCCTGACCACATCGATGTAGAATTTGACTCTATTGGTGGTCTTGAAACGATCAAACAAACTTTGTTTGAGCTTGTTATTCTACCCCTGCAACGACCAGACTTGTTTTCGCATGGCAAACTTCTTGGACCACAAAAGGGGGTCCTGTTGTATGGACCTCCTGGCACTGGGAAAACCATGCTCGCAAAAGCTATTGCCAAGGAGTCCGGAGCAGTTTTCATTAATGTGATGATATCAAACCTGATGAGCAAATGGTTCGGGGATGCCCAAAAGCTTGGTAAGTGTGTAGCATTCAACTGTAGCATATTTTAA
Protein sequence

>MsG0780036470.01.T01

MGVLSYAAKAALYCALVTGFRYLNRESSEKAKEIAKRLGRPFLKPIPMSQVLLSFILTFNLICALYCLQDVIADDVINPDHIDVEFDSIGGLETIKQTLFELVILPLQRPDLFSHGKLLGPQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVMISNLMSKWFGDAQKLGKCVAFNCSIF*