AlfalfaGEDB | MsG0180000552.01

M. sativa cultivar ZhongmuNo.1 / MsG0180000552.01

KEGG: -
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180000552.01.T01	XP_003588877.1	98.039	102	2	0	1	102	577	678	1.46E-67	224

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180000552.01.T01	Q9M345	42.466	73	40	2	1	71	561	633	1.66E-12	65.1

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180000552.01.T01	Q6UY57	98.039	102	2	0	1	102	577	678	6.95e-68	224

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080048595.01	MsG0180000552.01	0.800202	1.609569e-48	7.449774e-46
MsG0080048889.01	MsG0180000552.01	0.886388	3.571093e-72	2.545909e-68
MsG0080048919.01	MsG0180000552.01	-0.817462	3.257376e-52	2.373846e-49
MsG0080048992.01	MsG0180000552.01	-0.814054	1.872968e-51	1.243706e-48
MsG0080049008.01	MsG0180000552.01	0.809871	1.527158e-50	9.069885e-48
MsG0080049023.01	MsG0180000552.01	-0.848124	7.484868e-60	1.359533e-56
MsG0080049038.01	MsG0180000552.01	-0.833042	6.692396e-56	7.616839e-53
MsG0080049066.01	MsG0180000552.01	-0.804113	2.524039e-49	1.290613e-46
MsG0080049133.01	MsG0180000552.01	-0.815785	7.736239e-52	5.385154e-49
MsG0180000367.01	MsG0180000552.01	0.833467	5.246376e-56	6.046777e-53
MsG0180000551.01	MsG0180000552.01	0.894020	3.651944e-75	3.566112e-71
MsG0180000552.01	MsG0180000583.01	0.807228	5.599772e-50	3.102040e-47
MsG0180000552.01	MsG0180000719.01	-0.839858	1.232069e-57	1.723566e-54
MsG0180000552.01	MsG0180001054.01	-0.813639	2.311503e-51	1.517774e-48
MsG0180000552.01	MsG0180001484.01	-0.802835	4.645721e-49	2.298991e-46
MsG0180000552.01	MsG0180001513.01	0.802252	6.128267e-49	2.987770e-46
MsG0180000552.01	MsG0180002099.01	-0.822573	2.203324e-53	1.851514e-50
MsG0180000552.01	MsG0180003351.01	-0.816908	4.337898e-52	3.113588e-49
MsG0180000552.01	MsG0180003405.01	-0.807652	4.553409e-50	2.550217e-47
MsG0180000552.01	MsG0180003484.01	0.819762	9.795272e-53	7.606523e-50
MsG0180000552.01	MsG0180003617.01	-0.802812	4.696571e-49	2.322810e-46
MsG0180000552.01	MsG0180003758.01	-0.818479	1.918573e-52	1.437791e-49
MsG0180000552.01	MsG0180004124.01	-0.830554	2.750452e-55	2.907521e-52
MsG0180000552.01	MsG0180004125.01	-0.829313	5.520305e-55	5.630361e-52
MsG0180000552.01	MsG0180004322.01	-0.801476	8.843829e-49	4.227592e-46
MsG0180000552.01	MsG0180004502.01	-0.811788	5.876213e-51	3.671121e-48
MsG0180000552.01	MsG0180004553.01	-0.813360	2.662801e-51	1.735323e-48
MsG0180000552.01	MsG0180004581.01	-0.800509	1.394093e-48	6.502887e-46
MsG0180000552.01	MsG0180004731.01	-0.841290	5.198115e-58	7.602003e-55
MsG0180000552.01	MsG0180004737.01	-0.866473	2.778488e-65	9.375786e-62
MsG0180000552.01	MsG0180004773.01	-0.802476	5.508711e-49	2.701050e-46
MsG0180000552.01	MsG0180004787.01	-0.859436	4.141640e-63	1.093739e-59
MsG0180000552.01	MsG0180005272.01	0.801009	1.102252e-48	5.207629e-46
MsG0180000552.01	MsG0180005353.01	0.800439	1.440850e-48	6.709173e-46
MsG0180000552.01	MsG0180005369.01	-0.823836	1.117505e-53	9.731532e-51
MsG0180000552.01	MsG0180005767.01	-0.828956	6.739387e-55	6.799916e-52
MsG0180000552.01	MsG0180005984.01	0.833787	4.363699e-56	5.078391e-53
MsG0180000552.01	MsG0180006063.01	-0.827928	1.193117e-54	1.168373e-51
MsG0180000552.01	MsG0180006191.01	0.810305	1.231481e-50	7.396881e-48
MsG0180000552.01	MsG0180006212.01	-0.807100	5.961759e-50	3.291358e-47
MsG0180000552.01	MsG0180006227.01	-0.804500	2.096834e-49	1.082810e-46
MsG0180000552.01	MsG0280006381.01	-0.841253	5.314349e-58	7.763138e-55
MsG0180000552.01	MsG0280006534.01	-0.819253	1.279485e-52	9.795639e-50
MsG0180000552.01	MsG0280006883.01	0.817449	3.279536e-52	2.389104e-49
MsG0180000552.01	MsG0280006898.01	0.808668	2.765394e-50	1.590682e-47
MsG0180000552.01	MsG0280007017.01	-0.802385	5.753318e-49	2.814618e-46
MsG0180000552.01	MsG0280007288.01	-0.816804	4.578091e-52	3.276563e-49
MsG0180000552.01	MsG0280007291.01	-0.828002	1.145332e-54	1.124079e-51
MsG0180000552.01	MsG0280007426.01	0.831012	2.124482e-55	2.276516e-52
MsG0180000552.01	MsG0280007427.01	0.802435	5.616826e-49	2.751285e-46
MsG0180000552.01	MsG0280007576.01	-0.806529	7.870653e-50	4.281888e-47
MsG0180000552.01	MsG0280007653.01	-0.830698	2.536314e-55	2.692821e-52
MsG0180000552.01	MsG0280007786.01	0.830425	2.958282e-55	3.115539e-52
MsG0180000552.01	MsG0280008328.01	0.800873	1.175124e-48	5.532525e-46
MsG0180000552.01	MsG0280008659.01	0.807595	4.681621e-50	2.618077e-47
MsG0180000552.01	MsG0280009008.01	-0.816934	4.281229e-52	3.075209e-49
MsG0180000552.01	MsG0280009079.01	-0.830538	2.775728e-55	2.932864e-52
MsG0180000552.01	MsG0280009094.01	-0.812243	4.677029e-51	2.958238e-48
MsG0180000552.01	MsG0280009742.01	-0.831283	1.822331e-55	1.968336e-52
MsG0180000552.01	MsG0280009864.01	-0.819438	1.161306e-52	8.936587e-50
MsG0180000552.01	MsG0280010019.01	0.833164	6.242040e-56	7.129913e-53
MsG0180000552.01	MsG0280010047.01	0.851093	1.111064e-60	2.223624e-57
MsG0180000552.01	MsG0280010053.01	0.820448	6.824684e-53	5.401564e-50
MsG0180000552.01	MsG0280010055.01	0.811829	5.757057e-51	3.600584e-48
MsG0180000552.01	MsG0280010240.01	0.829360	5.376768e-55	5.491088e-52
MsG0180000552.01	MsG0280010455.01	-0.806230	9.099635e-50	4.913166e-47
MsG0180000552.01	MsG0280011066.01	-0.818305	2.101035e-52	1.566927e-49
MsG0180000552.01	MsG0280011236.01	0.800900	1.159806e-48	5.464441e-46
MsG0180000552.01	MsG0280011238.01	0.803631	3.178513e-49	1.605218e-46
MsG0180000552.01	MsG0280011267.01	0.822513	2.275628e-53	1.908871e-50
MsG0180000552.01	MsG0280011269.01	0.815655	8.272692e-52	5.737883e-49
MsG0180000552.01	MsG0280011281.01	-0.823663	1.226783e-53	1.063133e-50
MsG0180000552.01	MsG0380011974.01	0.813432	2.567014e-51	1.676139e-48
MsG0180000552.01	MsG0380012148.01	-0.848316	6.624071e-60	1.210819e-56
MsG0180000552.01	MsG0380013063.01	-0.842202	2.985988e-58	4.493769e-55
MsG0180000552.01	MsG0380014129.01	-0.809052	2.289218e-50	1.330276e-47
MsG0180000552.01	MsG0380014231.01	-0.807650	4.556199e-50	2.551704e-47
MsG0180000552.01	MsG0380014410.01	0.830617	2.655172e-55	2.812130e-52
MsG0180000552.01	MsG0380014639.01	-0.826359	2.833203e-54	2.651139e-51
MsG0180000552.01	MsG0380014642.01	-0.831066	2.061100e-55	2.212110e-52
MsG0180000552.01	MsG0380014735.01	-0.858493	7.931577e-63	2.027976e-59
MsG0180000552.01	MsG0380015271.01	-0.814061	1.866567e-51	1.239706e-48
MsG0180000552.01	MsG0380015572.01	0.827499	1.512705e-54	1.462953e-51
MsG0180000552.01	MsG0380015711.01	0.811251	7.686257e-51	4.734413e-48
MsG0180000552.01	MsG0380015802.01	-0.818801	1.621625e-52	1.226030e-49
MsG0180000552.01	MsG0380015828.01	-0.831754	1.394942e-55	1.528217e-52
MsG0180000552.01	MsG0380016065.01	-0.831660	1.472107e-55	1.608077e-52
MsG0180000552.01	MsG0380016089.01	-0.804359	2.243829e-49	1.154587e-46
MsG0180000552.01	MsG0380016476.01	0.856080	4.097856e-62	9.664817e-59
MsG0180000552.01	MsG0380016485.01	0.807217	5.631368e-50	3.118600e-47
MsG0180000552.01	MsG0380016718.01	-0.813767	2.166753e-51	1.427610e-48
MsG0180000552.01	MsG0380016889.01	-0.820669	6.069489e-53	4.832998e-50
MsG0180000552.01	MsG0380016934.01	-0.818456	1.941548e-52	1.454185e-49
MsG0180000552.01	MsG0380016935.01	-0.833424	5.377023e-56	6.189800e-53
MsG0180000552.01	MsG0380017231.01	0.809560	1.781194e-50	1.049214e-47
MsG0180000552.01	MsG0380017405.01	-0.833017	6.790614e-56	7.722690e-53
MsG0180000552.01	MsG0380017406.01	-0.811368	7.249899e-51	4.479349e-48
MsG0180000552.01	MsG0380017812.01	-0.829127	6.123687e-55	6.210552e-52
MsG0180000552.01	MsG0380017928.01	-0.849763	2.623427e-60	5.026373e-57
MsG0180000552.01	MsG0380018006.01	0.800056	1.723605e-48	7.948123e-46
MsG0180000552.01	MsG0480018201.01	-0.826072	3.314864e-54	3.076428e-51
MsG0180000552.01	MsG0480018202.01	-0.816079	6.652224e-52	4.667843e-49
MsG0180000552.01	MsG0480018203.01	-0.815287	9.988967e-52	6.858447e-49
MsG0180000552.01	MsG0480018840.01	-0.808149	3.569127e-50	2.025357e-47
MsG0180000552.01	MsG0480019017.01	0.819569	1.084088e-52	8.373214e-50
MsG0180000552.01	MsG0480019183.01	-0.826554	2.545034e-54	2.394602e-51
MsG0180000552.01	MsG0480019666.01	0.829772	4.268661e-55	4.412342e-52
MsG0180000552.01	MsG0480019861.01	-0.807243	5.558234e-50	3.080305e-47
MsG0180000552.01	MsG0480020269.01	-0.812482	4.146125e-51	2.639373e-48
MsG0180000552.01	MsG0480020838.01	-0.844034	9.707393e-59	1.547585e-55
MsG0180000552.01	MsG0480020958.01	0.820863	5.479073e-53	4.386952e-50
MsG0180000552.01	MsG0480020986.01	0.822084	2.861945e-53	2.371217e-50
MsG0180000552.01	MsG0480021433.01	0.801313	9.551125e-49	4.546963e-46
MsG0180000552.01	MsG0480022142.01	0.804717	1.889019e-49	9.810647e-47
MsG0180000552.01	MsG0480022428.01	0.829372	5.342266e-55	5.457706e-52
MsG0180000552.01	MsG0480022687.01	-0.806714	7.192240e-50	3.931425e-47
MsG0180000552.01	MsG0480022721.01	0.806237	9.070239e-50	4.898111e-47
MsG0180000552.01	MsG0480023067.01	0.832826	7.574097e-56	8.564028e-53
MsG0180000552.01	MsG0480023103.01	-0.801421	9.077403e-49	4.333131e-46
MsG0180000552.01	MsG0480023107.01	0.804162	2.465877e-49	1.262417e-46
MsG0180000552.01	MsG0480023152.01	-0.848918	4.512765e-60	8.412033e-57
MsG0180000552.01	MsG0480023242.01	-0.862724	4.138232e-64	1.224168e-60
MsG0180000552.01	MsG0480023244.01	-0.850307	1.848587e-60	3.605588e-57
MsG0180000552.01	MsG0480023322.01	0.806179	9.327926e-50	5.029836e-47
MsG0180000552.01	MsG0480023546.01	0.816310	5.905856e-52	4.170490e-49
MsG0180000552.01	MsG0480023663.01	0.828607	8.183429e-55	8.174189e-52
MsG0180000552.01	MsG0480023695.01	-0.838553	2.685516e-57	3.609577e-54
MsG0180000552.01	MsG0580024278.01	-0.817374	3.409026e-52	2.478352e-49
MsG0180000552.01	MsG0580024398.01	0.844759	6.194795e-59	1.010299e-55
MsG0180000552.01	MsG0580024442.01	-0.830471	2.881955e-55	3.039125e-52
MsG0180000552.01	MsG0580024488.01	0.801854	7.399107e-49	3.571014e-46
MsG0180000552.01	MsG0580024493.01	-0.829481	5.025198e-55	5.149542e-52
MsG0180000552.01	MsG0580024688.01	-0.808960	2.395019e-50	1.388326e-47
MsG0180000552.01	MsG0580024804.01	-0.853785	1.899146e-61	4.151140e-58
MsG0180000552.01	MsG0580025105.01	-0.828354	9.419664e-55	9.339754e-52
MsG0180000552.01	MsG0580025117.01	0.813556	2.411117e-51	1.579619e-48
MsG0180000552.01	MsG0580025153.01	-0.808798	2.594984e-50	1.497693e-47
MsG0180000552.01	MsG0580025486.01	-0.819242	1.287003e-52	9.850187e-50
MsG0180000552.01	MsG0580025552.01	0.805211	1.489501e-49	7.834351e-47
MsG0180000552.01	MsG0580025620.01	0.817225	3.682274e-52	2.665953e-49
MsG0180000552.01	MsG0580026362.01	-0.812727	3.665050e-51	2.348145e-48
MsG0180000552.01	MsG0580027276.01	-0.828602	8.206443e-55	8.196057e-52
MsG0180000552.01	MsG0580027797.01	0.802494	5.461942e-49	2.679295e-46
MsG0180000552.01	MsG0580028159.01	-0.813902	2.023505e-51	1.338176e-48
MsG0180000552.01	MsG0580028565.01	0.813835	2.092645e-51	1.381365e-48
MsG0180000552.01	MsG0580029296.01	0.835600	1.526872e-56	1.876183e-53
MsG0180000552.01	MsG0580029696.01	0.824129	9.540771e-54	8.376721e-51
MsG0180000552.01	MsG0580029792.01	-0.872232	3.723889e-67	1.546395e-63
MsG0180000552.01	MsG0580030067.01	-0.817543	3.122684e-52	2.280722e-49
MsG0180000552.01	MsG0580030179.01	0.820709	5.942759e-53	4.737614e-50
MsG0180000552.01	MsG0580030237.01	-0.810828	9.490784e-51	5.781018e-48
MsG0180000552.01	MsG0680030296.01	0.812746	3.630952e-51	2.327435e-48
MsG0180000552.01	MsG0680030732.01	0.839220	1.804856e-57	2.475923e-54
MsG0180000552.01	MsG0680031178.01	0.807617	4.630469e-50	2.591075e-47
MsG0180000552.01	MsG0680031686.01	0.803811	2.916609e-49	1.479800e-46
MsG0180000552.01	MsG0680034139.01	0.802718	4.911461e-49	2.423172e-46
MsG0180000552.01	MsG0680035584.01	-0.839410	1.610913e-57	2.222895e-54
MsG0180000552.01	MsG0680035870.01	-0.816818	4.545122e-52	3.254245e-49
MsG0180000552.01	MsG0780035994.01	-0.811825	5.768582e-51	3.607416e-48
MsG0180000552.01	MsG0780036470.01	-0.800179	1.626969e-48	7.525854e-46
MsG0180000552.01	MsG0780036839.01	0.801680	8.031742e-49	3.859060e-46
MsG0180000552.01	MsG0780036984.01	0.816364	5.744468e-52	4.062308e-49
MsG0180000552.01	MsG0780037458.01	-0.825387	4.820394e-54	4.387159e-51
MsG0180000552.01	MsG0780038047.01	-0.808040	3.764585e-50	2.130036e-47
MsG0180000552.01	MsG0780038305.01	0.883427	4.528820e-71	2.869541e-67
MsG0180000552.01	MsG0780038307.01	0.816023	6.845636e-52	4.796109e-49
MsG0180000552.01	MsG0780038573.01	-0.808987	2.364410e-50	1.371527e-47
MsG0180000552.01	MsG0780038860.01	0.806666	7.363438e-50	4.019799e-47
MsG0180000552.01	MsG0780038914.01	0.825633	4.213951e-54	3.862398e-51
MsG0180000552.01	MsG0780039287.01	-0.822003	2.988812e-53	2.470706e-50
MsG0180000552.01	MsG0780039431.01	0.862544	4.702311e-64	1.382142e-60
MsG0180000552.01	MsG0780039576.01	0.802430	5.631769e-49	2.758239e-46
MsG0180000552.01	MsG0780039642.01	0.801235	9.909516e-49	4.708321e-46
MsG0180000552.01	MsG0780039836.01	-0.803260	3.795701e-49	1.898673e-46
MsG0180000552.01	MsG0780039838.01	-0.822363	2.465139e-53	2.059108e-50
MsG0180000552.01	MsG0780039839.01	-0.836162	1.099844e-56	1.374655e-53
MsG0180000552.01	MsG0780039879.01	-0.810400	1.174509e-50	7.072400e-48
MsG0180000552.01	MsG0780039916.01	0.811869	5.641195e-51	3.531920e-48
MsG0180000552.01	MsG0780039979.01	0.825112	5.596665e-54	5.054389e-51
MsG0180000552.01	MsG0780040154.01	-0.806722	7.166926e-50	3.918392e-47
MsG0180000552.01	MsG0780040167.01	-0.809720	1.646027e-50	9.737257e-48
MsG0180000552.01	MsG0780040553.01	0.810853	9.377700e-51	5.715906e-48
MsG0180000552.01	MsG0780040640.01	-0.800122	1.671099e-48	7.718985e-46
MsG0180000552.01	MsG0780040805.01	0.807360	5.252005e-50	2.919283e-47
MsG0180000552.01	MsG0780040892.01	-0.806855	6.714796e-50	3.683991e-47
MsG0180000552.01	MsG0780040977.01	0.825011	5.913414e-54	5.325371e-51
MsG0180000552.01	MsG0780041036.01	0.804827	1.791999e-49	9.333348e-47
MsG0180000552.01	MsG0780041121.01	-0.815308	9.879337e-52	6.787061e-49
MsG0180000552.01	MsG0780041180.01	0.821104	4.820315e-53	3.885540e-50
MsG0180000552.01	MsG0780041436.01	0.831372	1.733341e-55	1.877280e-52
MsG0180000552.01	MsG0780041531.01	-0.863110	3.146128e-64	9.429652e-61
MsG0180000552.01	MsG0780041591.01	0.800564	1.358238e-48	6.344544e-46
MsG0180000552.01	MsG0780041691.01	-0.808214	3.457347e-50	1.965289e-47
MsG0180000552.01	MsG0780041783.01	-0.823133	1.631763e-53	1.393043e-50
MsG0180000552.01	MsG0880041908.01	-0.807516	4.864774e-50	2.715205e-47
MsG0180000552.01	MsG0880042122.01	0.834614	2.707127e-56	3.229586e-53
MsG0180000552.01	MsG0880042588.01	-0.809094	2.242415e-50	1.304561e-47
MsG0180000552.01	MsG0880043261.01	0.806128	9.560551e-50	5.148425e-47
MsG0180000552.01	MsG0880043906.01	0.805335	1.402657e-49	7.401162e-47
MsG0180000552.01	MsG0880044317.01	-0.819235	1.292163e-52	9.887276e-50
MsG0180000552.01	MsG0880045369.01	-0.825237	5.231045e-54	4.740865e-51
MsG0180000552.01	MsG0880045385.01	-0.834206	3.427326e-56	4.038734e-53
MsG0180000552.01	MsG0880045703.01	-0.826168	3.146166e-54	2.927886e-51
MsG0180000552.01	MsG0880045968.01	-0.848261	6.858704e-60	1.251442e-56
MsG0180000552.01	MsG0880046010.01	-0.839705	1.350112e-57	1.879759e-54
MsG0180000552.01	MsG0880046092.01	0.813420	2.582420e-51	1.685655e-48
MsG0180000552.01	MsG0880046105.01	-0.820428	6.896571e-53	5.455563e-50
MsG0180000552.01	MsG0880046174.01	-0.852174	5.489578e-61	1.137455e-57
MsG0180000552.01	MsG0880046341.01	-0.814330	1.627750e-51	1.089034e-48
MsG0180000552.01	MsG0880046463.01	0.801010	1.101499e-48	5.204260e-46
MsG0180000552.01	MsG0880046469.01	-0.822721	2.035908e-53	1.717873e-50
MsG0180000552.01	MsG0880046630.01	-0.847947	8.374556e-60	1.512815e-56
MsG0180000552.01	MsG0880046838.01	-0.800034	1.741179e-48	8.024681e-46
MsG0180000552.01	MsG0880047406.01	-0.800825	1.201486e-48	5.649576e-46
MsG0180000552.01	MsG0880047493.01	0.845345	4.304008e-59	7.151301e-56
MsG0180000552.01	MsG0880047697.01	0.810237	1.273538e-50	7.636140e-48
MsG0180000552.01	MsG0880047714.01	0.822455	2.347255e-53	1.965672e-50

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180000552.01.T01	MTR_1g014240	98.039	102	2	0	1	102	577	678	1.76e-71	224
MsG0180000552.01.T01	MTR_4g093110	45.833	72	39	0	1	72	555	626	1.80e-17	76.3
MsG0180000552.01.T01	MTR_4g093140	45.833	72	39	0	1	72	555	626	1.82e-17	76.3
MsG0180000552.01.T01	MTR_4g093050	50.704	71	35	0	1	71	560	630	7.63e-17	74.7
MsG0180000552.01.T01	MTR_8g068050	47.059	68	36	0	1	68	458	525	8.98e-17	74.3
MsG0180000552.01.T01	MTR_8g068050	47.059	68	36	0	1	68	568	635	9.12e-17	74.3
MsG0180000552.01.T01	MTR_8g067735	45.588	68	37	0	1	68	573	640	1.44e-16	73.9
MsG0180000552.01.T01	MTR_4g093070	42.254	71	41	0	1	71	562	632	1.68e-16	73.6
MsG0180000552.01.T01	MTR_4g093080	40.845	71	42	0	1	71	562	632	1.97e-16	73.6
MsG0180000552.01.T01	MTR_8g067720	44.286	70	39	0	1	70	553	622	3.76e-16	72.8
MsG0180000552.01.T01	MTR_8g067930	36.275	102	52	2	1	97	554	647	4.61e-16	72.4
MsG0180000552.01.T01	MTR_8g067630	45.588	68	37	0	1	68	502	569	7.30e-16	71.6
MsG0180000552.01.T01	MTR_8g067690	35.000	100	54	2	1	100	570	658	1.95e-14	67.8
MsG0180000552.01.T01	MTR_4g093040	37.000	100	50	2	1	100	573	659	2.97e-14	67.4
MsG0180000552.01.T01	MTR_7g115740	37.500	88	55	0	4	91	499	586	3.68e-14	67.0
MsG0180000552.01.T01	MTR_7g115740	37.500	88	55	0	4	91	575	662	3.72e-14	67.0
MsG0180000552.01.T01	MTR_4g093040	37.000	100	50	2	1	100	491	577	3.78e-14	67.0
MsG0180000552.01.T01	MTR_3g460810	47.692	65	33	1	1	65	539	602	4.55e-14	66.6
MsG0180000552.01.T01	MTR_5g095970	36.047	86	42	2	1	73	572	657	9.02e-14	65.9
MsG0180000552.01.T01	MTR_3g007870	34.884	86	43	2	1	73	559	644	3.55e-13	64.3
MsG0180000552.01.T01	MTR_7g116130	45.000	60	33	0	2	61	570	629	1.14e-12	62.8
MsG0180000552.01.T01	MTR_1g099260	41.791	67	39	0	2	68	558	624	1.57e-12	62.4
MsG0180000552.01.T01	MTR_5g077100	39.706	68	41	0	1	68	586	653	6.48e-12	60.5
MsG0180000552.01.T01	MTR_5g025020	33.824	68	45	0	1	68	579	646	7.60e-11	57.4

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180000552.01.T01	AT5G03140	42.029	69	39	1	1	69	591	658	8.60e-14	65.9
MsG0180000552.01.T01	AT3G53810	42.466	73	40	2	1	71	561	633	1.69e-13	65.1
MsG0180000552.01.T01	AT5G55830	42.647	68	39	0	1	68	582	649	1.96e-13	65.1
MsG0180000552.01.T01	AT5G10530	43.478	69	38	1	4	71	552	620	2.30e-13	64.7
MsG0180000552.01.T01	AT3G53380	42.647	68	39	0	1	68	594	661	4.63e-13	63.9
MsG0180000552.01.T01	AT5G06740	38.095	105	61	3	1	102	549	652	9.27e-13	63.2
MsG0180000552.01.T01	AT5G06740	38.095	105	61	3	1	102	561	664	9.56e-13	63.2
MsG0180000552.01.T01	AT5G65600	41.791	67	38	1	4	69	573	639	2.13e-12	62.0
MsG0180000552.01.T01	AT2G37710	37.500	72	44	1	1	71	561	632	1.19e-11	59.7

Find 25 sgRNAs with CRISPR-Local

Find 23 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GTTTGCTTATTGTAGGTTTA+TGG	0.178488	1:+7712875	MsG0180000552.01.T01:CDS
TTCCTTGATGAATTGGGTTT+GGG	0.254127	1:+7712774	None:intergenic
GGACCATTGATTTGCCTAAA+AGG	0.283416	1:-7713018	None:intergenic
TTTCATGTTCCTTGATGAAT+TGG	0.284388	1:+7712767	None:intergenic
ACTAACAGTCTTGTTACTTC+TGG	0.290183	1:+7713060	MsG0180000552.01.T01:CDS
TAAGGCTTATGAAGTAATTA+AGG	0.292782	1:+7712927	MsG0180000552.01.T01:CDS
GTTCCTTGATGAATTGGGTT+TGG	0.348317	1:+7712773	None:intergenic
TAAGGTTCTTCAACTTGAAA+TGG	0.357917	1:+7712945	MsG0180000552.01.T01:CDS
ATGAAGAGTTTGCTTATTGT+AGG	0.372487	1:+7712868	MsG0180000552.01.T01:CDS
TTCATGTTCCTTGATGAATT+GGG	0.382059	1:+7712768	None:intergenic
ATTTGCCTAAAAGGTACAAT+AGG	0.390367	1:-7713009	None:intergenic
TGCATATCAAGTGGAAGTTC+AGG	0.394428	1:-7712973	None:intergenic
TTGGGTTTGGGGACTTTATG+TGG	0.431991	1:+7712786	MsG0180000552.01.T01:CDS
GTCATAGGTGGTGCCATTGA+GGG	0.477311	1:-7713039	None:intergenic
GTAACAAGACTGTTAGTCAT+AGG	0.484343	1:-7713054	None:intergenic
CTCATTCAAATGATAAAGAA+AGG	0.500852	1:+7712902	MsG0180000552.01.T01:CDS
TTAATTACTTCATAAGCCTT+AGG	0.506325	1:-7712925	None:intergenic
AGTCATAGGTGGTGCCATTG+AGG	0.524601	1:-7713040	None:intergenic
TCCTTGATGAATTGGGTTTG+GGG	0.537881	1:+7712775	None:intergenic
GCAAATCAATGGTCCCTCAA+TGG	0.539122	1:+7713026	MsG0180000552.01.T01:CDS
TGCCTAAAAGGTACAATAGG+AGG	0.560063	1:-7713006	None:intergenic
GTTTGGGGACTTTATGTGGA+AGG	0.573280	1:+7712790	MsG0180000552.01.T01:CDS
AAATGATAAAGAAAGGCCTA+AGG	0.599723	1:+7712909	MsG0180000552.01.T01:CDS
GCACGATCATGCATATCAAG+TGG	0.608568	1:-7712982	None:intergenic
ACAAGACTGTTAGTCATAGG+TGG	0.653990	1:-7713051	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	CTCATTCAAATGATAAAGAA+AGG	+	Chr1:7712902-7712921	MsG0180000552.01.T01:CDS	25.0%
!	TAAGGCTTATGAAGTAATTA+AGG	+	Chr1:7712927-7712946	MsG0180000552.01.T01:CDS	25.0%
!	TGCTGATGAAAAATTGAATA+TGG	+	Chr1:7712828-7712847	MsG0180000552.01.T01:CDS	25.0%
!	TTAATTACTTCATAAGCCTT+AGG	-	Chr1:7712928-7712947	None:intergenic	25.0%
	AAATGATAAAGAAAGGCCTA+AGG	+	Chr1:7712909-7712928	MsG0180000552.01.T01:CDS	30.0%
	GTTTGCTTATTGTAGGTTTA+TGG	+	Chr1:7712875-7712894	MsG0180000552.01.T01:CDS	30.0%
	TAAGGTTCTTCAACTTGAAA+TGG	+	Chr1:7712945-7712964	MsG0180000552.01.T01:CDS	30.0%
!	ATGAAGAGTTTGCTTATTGT+AGG	+	Chr1:7712868-7712887	MsG0180000552.01.T01:CDS	30.0%
!	ATTTGCCTAAAAGGTACAAT+AGG	-	Chr1:7713012-7713031	None:intergenic	30.0%
	GTAACAAGACTGTTAGTCAT+AGG	-	Chr1:7713057-7713076	None:intergenic	35.0%
!	GTACCTTTTAGGCAAATCAA+TGG	+	Chr1:7713015-7713034	MsG0180000552.01.T01:CDS	35.0%
!!	ACTAACAGTCTTGTTACTTC+TGG	+	Chr1:7713060-7713079	MsG0180000552.01.T01:CDS	35.0%
	ACAAGACTGTTAGTCATAGG+TGG	-	Chr1:7713054-7713073	None:intergenic	40.0%
	TGCATATCAAGTGGAAGTTC+AGG	-	Chr1:7712976-7712995	None:intergenic	40.0%
!	CTCCTCCTATTGTACCTTTT+AGG	+	Chr1:7713004-7713023	MsG0180000552.01.T01:CDS	40.0%
!	TGCCTAAAAGGTACAATAGG+AGG	-	Chr1:7713009-7713028	None:intergenic	40.0%
!!	GGACCATTGATTTGCCTAAA+AGG	-	Chr1:7713021-7713040	None:intergenic	40.0%
	GCAAATCAATGGTCCCTCAA+TGG	+	Chr1:7713026-7713045	MsG0180000552.01.T01:CDS	45.0%
	GCACGATCATGCATATCAAG+TGG	-	Chr1:7712985-7713004	None:intergenic	45.0%
	GTTTGGGGACTTTATGTGGA+AGG	+	Chr1:7712790-7712809	MsG0180000552.01.T01:CDS	45.0%
	TTGGGTTTGGGGACTTTATG+TGG	+	Chr1:7712786-7712805	MsG0180000552.01.T01:CDS	45.0%
!!	AGTCATAGGTGGTGCCATTG+AGG	-	Chr1:7713043-7713062	None:intergenic	50.0%
!!	GTCATAGGTGGTGCCATTGA+GGG	-	Chr1:7713042-7713061	None:intergenic	50.0%

Chromosome	Type	Strat	End	Strand	Name
Chr1	gene	7712781	7713089	7712781	ID=MsG0180000552.01;Name=MsG0180000552.01
Chr1	mRNA	7712781	7713089	7712781	ID=MsG0180000552.01.T01;Parent=MsG0180000552.01;Name=MsG0180000552.01.T01;_AED=0.49;_eAED=0.49;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|102
Chr1	exon	7712781	7713089	7712781	ID=MsG0180000552.01.T01:exon:2820;Parent=MsG0180000552.01.T01
Chr1	CDS	7712781	7713089	7712781	ID=MsG0180000552.01.T01:cds;Parent=MsG0180000552.01.T01

Gene Sequence	>MsG0180000552.01.T01 ATGAATTGGGTTTGGGGACTTTATGTGGAAGGAAATCTTATGTGTGCTGCTGATGAAAAATTGAATATGGAGTTTGATGTTAGTGAAATGAAGAGTTTGCTTATTGTAGGTTTATGGTGTACTCATTCAAATGATAAAGAAAGGCCTAAGGCTTATGAAGTAATTAAGGTTCTTCAACTTGAAATGGCATTACCTGAACTTCCACTTGATATGCATGATCGTGCTCCTCCTATTGTACCTTTTAGGCAAATCAATGGTCCCTCAATGGCACCACCTATGACTAACAGTCTTGTTACTTCTGGAAGATAG
Protein sequence	>MsG0180000552.01.T01 MNWVWGLYVEGNLMCAADEKLNMEFDVSEMKSLLIVGLWCTHSNDKERPKAYEVIKVLQLEMALPELPLDMHDRAPPIVPFRQINGPSMAPPMTNSLVTSGR*