AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880046105.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880046105.01.T01 MTR_4g099360 80.663 362 11 3 1 361 1 304 0.0 567
MsG0880046105.01.T01 MTR_1g106550 41.848 184 105 2 133 314 153 336 3.91e-46 161
MsG0880046105.01.T01 MTR_7g112640 45.977 174 91 2 144 314 119 292 3.05e-42 150
MsG0880046105.01.T01 MTR_4g075100 40.331 181 100 1 135 315 45 217 2.55e-39 140
MsG0880046105.01.T01 MTR_4g102000 37.989 179 103 1 135 313 130 300 3.45e-36 134
MsG0880046105.01.T01 MTR_7g109610 36.788 193 107 2 130 315 96 280 5.24e-35 130
MsG0880046105.01.T01 MTR_7g082980 37.569 181 105 1 135 315 79 251 6.90e-35 130
MsG0880046105.01.T01 MTR_1g086940 36.458 192 107 2 130 314 99 282 3.94e-34 128
MsG0880046105.01.T01 MTR_5g026840 35.354 198 118 2 135 332 88 275 1.24e-32 124
MsG0880046105.01.T01 MTR_4g069800 30.350 257 154 4 66 314 31 270 1.00e-29 115
MsG0880046105.01.T01 MTR_4g034690 30.412 194 126 2 121 313 8 193 1.63e-27 107
MsG0880046105.01.T01 MTR_4g069800 32.370 173 109 1 142 314 74 238 1.60e-26 106
MsG0880046105.01.T01 MTR_4g069800 32.020 203 113 4 66 260 31 216 5.16e-22 94.0
MsG0880046105.01.T01 MTR_0002s0730 28.889 180 119 2 135 313 22 193 1.23e-21 92.0
MsG0880046105.01.T01 MTR_6g086515 65.517 58 7 1 121 178 11 55 1.04e-17 76.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880046105.01.T01 AT4G17040 62.500 344 68 4 20 361 21 305 5.15e-137 392
MsG0880046105.01.T01 AT1G09130 48.387 186 93 2 132 314 118 303 7.58e-52 175
MsG0880046105.01.T01 AT1G09130 48.387 186 93 2 132 314 118 303 7.58e-52 175
MsG0880046105.01.T01 AT1G09130 48.387 186 93 2 132 314 118 303 1.90e-51 176
MsG0880046105.01.T01 AT1G49970 48.087 183 93 2 133 313 169 351 1.48e-48 168
MsG0880046105.01.T01 AT5G23140 40.556 180 99 1 135 314 48 219 2.90e-42 147
MsG0880046105.01.T01 AT1G12410 38.547 179 102 1 135 313 89 259 1.49e-37 136
MsG0880046105.01.T01 AT1G02560 38.542 192 103 2 130 314 102 285 2.14e-36 134
MsG0880046105.01.T01 AT5G45390 37.017 181 106 1 135 315 79 251 4.32e-34 127
MsG0880046105.01.T01 AT1G66670 32.692 208 129 2 135 339 85 284 1.73e-31 121
MsG0880046105.01.T01 AT1G11750 31.527 203 124 2 119 314 73 267 2.01e-28 112
MsG0880046105.01.T01 AT1G11750 31.527 203 124 2 119 314 91 285 2.86e-28 112
MsG0880046105.01.T01 ATCG00670 29.016 193 124 3 122 313 13 193 6.61e-26 103

Find 84 sgRNAs with CRISPR-Local

Find 401 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGAGTTTATGTACAGATAAA+TGG 0.194117 8:-69085580 None:intergenic
TGATGGGTCTGATAGGGGTT+AGG 0.281995 8:-69083326 None:intergenic
AGTTGTTTCTGACCTTAAAA+AGG 0.300292 8:+69089336 MsG0880046105.01.T01:CDS
CTCTCTGCGTTGGCAATGCT+TGG 0.303068 8:+69088189 MsG0880046105.01.T01:CDS
GGGAGAGGCAGCCTTACTTT+TGG 0.318790 8:+69088211 MsG0880046105.01.T01:CDS
CACTTGGACTAAAATACTTT+GGG 0.321699 8:-69089171 None:intergenic
CCAAGTGAAGCTGTTGAGTA+TGG 0.336233 8:+69089187 MsG0880046105.01.T01:CDS
TCCATCTGTTACAGAGTTGA+TGG 0.354136 8:+69085515 MsG0880046105.01.T01:CDS
GAGGATTTGATGGGTCTGAT+AGG 0.355717 8:-69083333 None:intergenic
CAGCCTATTGCGCGGTTTCA+AGG 0.358842 8:+69088386 MsG0880046105.01.T01:intron
ACCAAGCAAACTAAAATATA+TGG 0.361518 8:+69089267 MsG0880046105.01.T01:CDS
TCACTTGGACTAAAATACTT+TGG 0.371602 8:-69089172 None:intergenic
ATCACTAACCTTTGTTGTTC+CGG 0.377807 8:-69085604 None:intergenic
AGCGACGAAATCGGTGGAAA+TGG 0.379765 8:-69083367 None:intergenic
GAGTTTATGTACAGATAAAT+GGG 0.390251 8:-69085579 None:intergenic
GTACAATGAGAGGGGCTCTA+AGG 0.390258 8:+69089306 MsG0880046105.01.T01:CDS
TCTCTGCGTTGGCAATGCTT+GGG 0.392552 8:+69088190 MsG0880046105.01.T01:CDS
TGACCTTGAAACCGCGCAAT+AGG 0.407017 8:-69088389 None:intergenic
CATGGGTTTGTTTGATAAGA+AGG 0.425617 8:-69083277 None:intergenic
AGGATTTGATGGGTCTGATA+GGG 0.433341 8:-69083332 None:intergenic
GATGGGTCTGATAGGGGTTA+GGG 0.433564 8:-69083325 None:intergenic
AGCAGATTGAAGCTGATATT+CGG 0.440887 8:+69089146 MsG0880046105.01.T01:CDS
CTTTCAGGGAGGTGAGAAGT+TGG 0.446585 8:+69087319 MsG0880046105.01.T01:intron
GTTTCTGAAAGAGGATTTGA+TGG 0.446685 8:-69083343 None:intergenic
CACTAGAGTGAAGACAGAAT+TGG 0.449509 8:+69088445 MsG0880046105.01.T01:CDS
TTTCAGGGAGGTGAGAAGTT+GGG 0.452298 8:+69087320 MsG0880046105.01.T01:intron
TTGTTTCATCGTCATATTGA+AGG 0.457683 8:-69085554 None:intergenic
TAAAAGAGGAGTCGTTACTA+TGG 0.462951 8:+69083485 MsG0880046105.01.T01:CDS
AGTTCCACTAGTAATTTCTC+TGG 0.465833 8:+69083408 MsG0880046105.01.T01:CDS
CTTATCATTATAGTTGATGA+TGG 0.470041 8:-69088266 None:intergenic
CCCGCGACGTTTCAAAGCTC+CGG 0.479421 8:+69083459 MsG0880046105.01.T01:CDS
GGATTTGATGGGTCTGATAG+GGG 0.482645 8:-69083331 None:intergenic
CGTGGAAGGAGCGACGAAAT+CGG 0.485145 8:-69083376 None:intergenic
CCATACTCAACAGCTTCACT+TGG 0.491392 8:-69089187 None:intergenic
CATGCAGTCCCTCTTGAGAA+AGG 0.492109 8:-69085420 None:intergenic
TACAGGTAAGAAGCTAAGTC+TGG 0.492907 8:-69085456 None:intergenic
CGTTGGCAATGCTTGGGGAG+AGG 0.494410 8:+69088196 MsG0880046105.01.T01:CDS
GGAAATGGAGTTTCTGAAAG+AGG 0.503787 8:-69083352 None:intergenic
GAAGGTGAAAGATGCGTTTG+CGG 0.506086 8:-69083259 None:intergenic
TGCACCAGCAGCCAAAAGTA+AGG 0.509782 8:-69088222 None:intergenic
CGATTTCGTCGCTCCTTCCA+CGG 0.510311 8:+69083377 MsG0880046105.01.T01:CDS
TTTGAAACGTCGCGGGATTG+AGG 0.512001 8:-69083452 None:intergenic
CAAAGCTCCGGCGGTAAAAG+AGG 0.512714 8:+69083471 MsG0880046105.01.T01:CDS
CTTTCTCAAGAGGGACTGCA+TGG 0.514476 8:+69085421 MsG0880046105.01.T01:CDS
ATATCAGCTTCAATCTGCTC+AGG 0.516570 8:-69089142 None:intergenic
GTTAGGGTTCGTGATGAAGA+GGG 0.526254 8:-69083309 None:intergenic
GGTTAGGGTTCGTGATGAAG+AGG 0.534675 8:-69083310 None:intergenic
GCAGGTGTTGTACAATGAGA+GGG 0.541340 8:+69089297 MsG0880046105.01.T01:CDS
TGCAGGTGTTGTACAATGAG+AGG 0.548770 8:+69089296 MsG0880046105.01.T01:CDS
CTCTGCGTTGGCAATGCTTG+GGG 0.548984 8:+69088191 MsG0880046105.01.T01:CDS
CCGGAGCTTTGAAACGTCGC+GGG 0.552666 8:-69083459 None:intergenic
TTTGACAACCTTGTTCGTGT+TGG 0.557554 8:+69084112 MsG0880046105.01.T01:CDS
TGAAGAGGGTGAAATGAGCA+TGG 0.558343 8:-69083295 None:intergenic
CGGGATTGAGGCACGGAGGA+CGG 0.560093 8:-69083440 None:intergenic
ATCAACTATAATGATAAGAC+AGG 0.560171 8:+69088271 MsG0880046105.01.T01:CDS
TTGCAGTTTATGATTTGATG+AGG 0.568470 8:+69087360 MsG0880046105.01.T01:CDS
TAGGTTATTCCTTTCTCAAG+AGG 0.571434 8:+69085411 MsG0880046105.01.T01:intron
AGGTTATTCCTTTCTCAAGA+GGG 0.573523 8:+69085412 MsG0880046105.01.T01:intron
CACATTGACCAACACGAACA+AGG 0.577058 8:-69084120 None:intergenic
GTTTGCGGTTGCAACCTCCA+TGG 0.577625 8:-69083244 None:intergenic
TTTCTCAAGAGGGACTGCAT+GGG 0.580047 8:+69085422 MsG0880046105.01.T01:CDS
ACCATCAACTCTGTAACAGA+TGG 0.580533 8:-69085516 None:intergenic
TAAGAAGCTAAGTCTGGTGG+AGG 0.595854 8:-69085450 None:intergenic
CTTGTTCGTGTTGGTCAATG+TGG 0.597405 8:+69084121 MsG0880046105.01.T01:CDS
TAAGGTCAGAAACAACTCCA+TGG 0.601923 8:-69089330 None:intergenic
ACTAACCTTTGTTGTTCCGG+TGG 0.613992 8:-69085601 None:intergenic
AGGTAAGAAGCTAAGTCTGG+TGG 0.621610 8:-69085453 None:intergenic
TATCTGTACATAAACTCCAC+CGG 0.621927 8:+69085585 MsG0880046105.01.T01:CDS
GAACTACTGATTGCCGTGGA+AGG 0.625527 8:-69083390 None:intergenic
TTTCTGAAAGAGGATTTGAT+GGG 0.625809 8:-69083342 None:intergenic
GAGAGGGGCTCTAAGGACCA+TGG 0.632618 8:+69089313 MsG0880046105.01.T01:CDS
AAACTCCACCGGAACAACAA+AGG 0.638142 8:+69085596 MsG0880046105.01.T01:CDS
GAAGAGGGTGAAATGAGCAT+GGG 0.645982 8:-69083294 None:intergenic
AACGTCGCGGGATTGAGGCA+CGG 0.648196 8:-69083447 None:intergenic
GTGACCAGAGAAATTACTAG+TGG 0.649718 8:-69083412 None:intergenic
TCAATTTGCAGCCTATTGCG+CGG 0.651428 8:+69088378 MsG0880046105.01.T01:intron
CAGGTGTTGTACAATGAGAG+GGG 0.651553 8:+69089298 MsG0880046105.01.T01:CDS
AGTGGAACTACTGATTGCCG+TGG 0.654345 8:-69083394 None:intergenic
GCCGGAGCTTTGAAACGTCG+CGG 0.654571 8:-69083460 None:intergenic
GGAAGGAGCGACGAAATCGG+TGG 0.660421 8:-69083373 None:intergenic
TTGATGATGGCAAAGCAGAA+CGG 0.665478 8:-69088253 None:intergenic
GCGACGTTTCAAAGCTCCGG+CGG 0.712932 8:+69083462 MsG0880046105.01.T01:CDS
TGAGTATGGAATCATAGACA+AGG 0.714132 8:+69089201 MsG0880046105.01.T01:CDS
GTCGCGGGATTGAGGCACGG+AGG 0.746029 8:-69083444 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAATCATATTAAGTTA+TGG - Chr8:69084586-69084605 None:intergenic 10.0%
!! AAAAAATCATATTAAGTTAT+GGG - Chr8:69084585-69084604 None:intergenic 10.0%
!! AAAAATGTTAAAGTTATTTA+TGG - Chr8:69086932-69086951 None:intergenic 10.0%
!! AAATAATGAGATAAATAATA+AGG - Chr8:69084649-69084668 None:intergenic 10.0%
!! AATAATGAGATAAATAATAA+GGG - Chr8:69084648-69084667 None:intergenic 10.0%
!! AATCTAATTTAACATAATTA+TGG + Chr8:69088496-69088515 MsG0880046105.01.T01:intron 10.0%
!! ATAAAATAAAATAAATGACA+GGG - Chr8:69087410-69087429 None:intergenic 10.0%
!! ATATGAAATATATACAAAAA+GGG - Chr8:69083907-69083926 None:intergenic 10.0%
!! TAATGTCAAATATTAATTAA+TGG + Chr8:69088002-69088021 MsG0880046105.01.T01:intron 10.0%
!! TTAAAAAATGAACTAAAAAA+AGG - Chr8:69086892-69086911 None:intergenic 10.0%
!!! AAAAAAATGTTTTTTTTTTG+TGG - Chr8:69085794-69085813 None:intergenic 10.0%
!!! TTTTGATTTTAAATAAAAAG+AGG - Chr8:69085237-69085256 None:intergenic 10.0%
!!! TTTTTGTATATATTTCATAT+GGG + Chr8:69083907-69083926 MsG0880046105.01.T01:intron 10.0%
!! AATACAAATAAAATAGAGAA+AGG - Chr8:69087903-69087922 None:intergenic 15.0%
!! CATATGAAATATATACAAAA+AGG - Chr8:69083908-69083927 None:intergenic 15.0%
!! GATAAAATAAAATAAATGAC+AGG - Chr8:69087411-69087430 None:intergenic 15.0%
!! TTAAAATCAAAAACTTTAAC+TGG + Chr8:69085245-69085264 MsG0880046105.01.T01:intron 15.0%
!!! AGTATTATTTCTTATGAAAA+AGG - Chr8:69085665-69085684 None:intergenic 15.0%
!!! ATCACACTTAATTTTTTAAA+TGG - Chr8:69088689-69088708 None:intergenic 15.0%
!!! ATCATATTTTTAACATGTAT+GGG - Chr8:69087942-69087961 None:intergenic 15.0%
!!! ATTTTAAAATATATTCGAGA+GGG - Chr8:69088817-69088836 None:intergenic 15.0%
!!! CTAGAATTTTCTTTATTTTT+AGG + Chr8:69087743-69087762 MsG0880046105.01.T01:intron 15.0%
!!! CTTTTTGTATATATTTCATA+TGG + Chr8:69083906-69083925 MsG0880046105.01.T01:intron 15.0%
!!! TAGAAATTTTTGAAAAAAAG+TGG - Chr8:69086747-69086766 None:intergenic 15.0%
!!! TATTTCTTGTTTTTGTTTTT+TGG + Chr8:69083931-69083950 MsG0880046105.01.T01:intron 15.0%
!!! TATTTTAAAATATATTCGAG+AGG - Chr8:69088818-69088837 None:intergenic 15.0%
!!! TATTTTATCATACTTTTGTT+GGG + Chr8:69087422-69087441 MsG0880046105.01.T01:intron 15.0%
!!! TTATTTTATCATACTTTTGT+TGG + Chr8:69087421-69087440 MsG0880046105.01.T01:intron 15.0%
!!! TTTTTCAAAAATTTCTAATG+AGG + Chr8:69086750-69086769 MsG0880046105.01.T01:intron 15.0%
!! AAAAATCGAATTGTTTACTT+GGG + Chr8:69085480-69085499 MsG0880046105.01.T01:CDS 20.0%
!! AAACTGAGTACATTATTAAA+TGG - Chr8:69088308-69088327 None:intergenic 20.0%
!! AAGAAAAAAACATCTAGTTA+TGG - Chr8:69089233-69089252 None:intergenic 20.0%
!! ACAAGATTCTATTAAACAAA+CGG - Chr8:69087293-69087312 None:intergenic 20.0%
!! ATAATTGTGATATAGACATA+GGG + Chr8:69086237-69086256 MsG0880046105.01.T01:intron 20.0%
!! ATCTATTGTTAGTGTTTAAA+TGG + Chr8:69087968-69087987 MsG0880046105.01.T01:intron 20.0%
!! CACATATGTACAATAATTTA+TGG + Chr8:69085316-69085335 MsG0880046105.01.T01:intron 20.0%
!! CATAATATATAAATCATGCA+TGG - Chr8:69085280-69085299 None:intergenic 20.0%
!! CATGCATGATTTATATATTA+TGG + Chr8:69085278-69085297 MsG0880046105.01.T01:intron 20.0%
!! TAAAACCATTCTAAATACAA+GGG + Chr8:69084984-69085003 MsG0880046105.01.T01:intron 20.0%
!! TATAATTGTGATATAGACAT+AGG + Chr8:69086236-69086255 MsG0880046105.01.T01:intron 20.0%
!! TGATTGAAAAAAAAGTTTCT+TGG + Chr8:69083697-69083716 MsG0880046105.01.T01:intron 20.0%
!!! AAAATGTTTTTTTTTTGTGG+TGG - Chr8:69085791-69085810 None:intergenic 20.0%
!!! AACAATAAACGTTTTTTTAG+TGG + Chr8:69085890-69085909 MsG0880046105.01.T01:intron 20.0%
!!! AATTTTTGAAAAAAAGTGGA+AGG - Chr8:69086743-69086762 None:intergenic 20.0%
!!! ACATATTTTACTTAAAGAAG+TGG - Chr8:69085989-69086008 None:intergenic 20.0%
!!! ACATTTTTTTTTTTATGTCC+TGG + Chr8:69085701-69085720 MsG0880046105.01.T01:intron 20.0%
!!! ATAACTAGATGTTTTTTTCT+TGG + Chr8:69089232-69089251 MsG0880046105.01.T01:CDS 20.0%
!!! ATTTTTGAAAAAAAGTGGAA+GGG - Chr8:69086742-69086761 None:intergenic 20.0%
!!! CATCATATTTTTAACATGTA+TGG - Chr8:69087943-69087962 None:intergenic 20.0%
!!! GTTTGTAATAATTTCAAGTA+TGG + Chr8:69083584-69083603 MsG0880046105.01.T01:intron 20.0%
!!! TATTCATTTTTTCTTGTCTT+TGG + Chr8:69085387-69085406 MsG0880046105.01.T01:intron 20.0%
!!! TCATATTTTTAACATGTATG+GGG - Chr8:69087941-69087960 None:intergenic 20.0%
!!! TCATTTTTTACTTTAAGCTT+AGG + Chr8:69084406-69084425 MsG0880046105.01.T01:intron 20.0%
!!! TCTCTATTTTATTTGTATTC+TGG + Chr8:69087904-69087923 MsG0880046105.01.T01:intron 20.0%
!!! TTTTAAAATATATTCGAGAG+GGG - Chr8:69088816-69088835 None:intergenic 20.0%
! AAAACTTTAACTGGTAATAC+TGG + Chr8:69085254-69085273 MsG0880046105.01.T01:intron 25.0%
! AAATAATACTTCTCATAGCA+TGG + Chr8:69085675-69085694 MsG0880046105.01.T01:intron 25.0%
! AATGTCGAAATCAAAAATCA+AGG + Chr8:69083783-69083802 MsG0880046105.01.T01:intron 25.0%
! ACCAAGCAAACTAAAATATA+TGG + Chr8:69089267-69089286 MsG0880046105.01.T01:CDS 25.0%
! AGATACCATATTGAAGTTAT+AGG - Chr8:69084681-69084700 None:intergenic 25.0%
! AGTGTGAATGCATTTATTTA+AGG + Chr8:69086014-69086033 MsG0880046105.01.T01:intron 25.0%
! ATAACTTAGCTATGTAATTC+TGG + Chr8:69088138-69088157 MsG0880046105.01.T01:intron 25.0%
! ATCAACTATAATGATAAGAC+AGG + Chr8:69088271-69088290 MsG0880046105.01.T01:CDS 25.0%
! ATTTAATACAAACTTTCTGC+AGG - Chr8:69088120-69088139 None:intergenic 25.0%
! CAAAAATCGAATTGTTTACT+TGG + Chr8:69085479-69085498 MsG0880046105.01.T01:CDS 25.0%
! CACTGAAATATCAAAATGTA+AGG + Chr8:69088592-69088611 MsG0880046105.01.T01:intron 25.0%
! CCATAGTAATAAGTTAAAGA+TGG - Chr8:69089055-69089074 None:intergenic 25.0%
! GAATATACTCTAGATATCAT+AGG - Chr8:69084220-69084239 None:intergenic 25.0%
! GAGTTTATGTACAGATAAAT+GGG - Chr8:69085582-69085601 None:intergenic 25.0%
! GTAAAACCATTCTAAATACA+AGG + Chr8:69084983-69085002 MsG0880046105.01.T01:intron 25.0%
! TAAGCAAAACTTATAACTCA+AGG - Chr8:69085128-69085147 None:intergenic 25.0%
! TATTGTACATATGTGTTGTA+TGG - Chr8:69085311-69085330 None:intergenic 25.0%
! TCAAAAATTTCTAATGAGGA+GGG + Chr8:69086754-69086773 MsG0880046105.01.T01:intron 25.0%
! TTCAAAAATTTCTAATGAGG+AGG + Chr8:69086753-69086772 MsG0880046105.01.T01:intron 25.0%
! TTTAATACAAACTTTCTGCA+GGG - Chr8:69088119-69088138 None:intergenic 25.0%
!! AAAATATATGGTCTTTTTGC+AGG + Chr8:69089279-69089298 MsG0880046105.01.T01:CDS 25.0%
!! AAACAATTCGATTTTTGTAC+AGG - Chr8:69085476-69085495 None:intergenic 25.0%
!! AAACAGGTCTAACTTTAAAA+AGG - Chr8:69086109-69086128 None:intergenic 25.0%
!! ACACTGTTTGATTTATTTCA+AGG + Chr8:69089087-69089106 MsG0880046105.01.T01:intron 25.0%
!! ACCAAAAAATTATTTTCCCA+CGG - Chr8:69088908-69088927 None:intergenic 25.0%
!! CCATCTTTAACTTATTACTA+TGG + Chr8:69089052-69089071 MsG0880046105.01.T01:intron 25.0%
!! GAATTTAAAGTTTATGAGTC+AGG - Chr8:69084015-69084034 None:intergenic 25.0%
!! GAGTTATAAGTTTTGCTTAA+CGG + Chr8:69085129-69085148 MsG0880046105.01.T01:intron 25.0%
!! TACATGAAAAGTGTAAAATC+AGG + Chr8:69084065-69084084 MsG0880046105.01.T01:intron 25.0%
!! TTTAAAATATATTCGAGAGG+GGG - Chr8:69088815-69088834 None:intergenic 25.0%
!!! ACCATATATTTTAGTTTGCT+TGG - Chr8:69089271-69089290 None:intergenic 25.0%
!!! ATTTTTTCTTGTCTTTGGAT+AGG + Chr8:69085392-69085411 MsG0880046105.01.T01:intron 25.0%
!!! CTCAGTTTATTTTATGTCTT+CGG + Chr8:69088320-69088339 MsG0880046105.01.T01:intron 25.0%
!!! CTTACATTTTGATATTTCAG+TGG - Chr8:69088594-69088613 None:intergenic 25.0%
!!! CTTATCATTATAGTTGATGA+TGG - Chr8:69088269-69088288 None:intergenic 25.0%
!!! TACTATTCTGTATTTTAGCT+CGG + Chr8:69087062-69087081 MsG0880046105.01.T01:intron 25.0%
!!! TTTCAAGTATGGTTTTGTAA+CGG + Chr8:69083595-69083614 MsG0880046105.01.T01:intron 25.0%
!!! TTTGTTTTGCGAAAGAATAT+TGG + Chr8:69083626-69083645 MsG0880046105.01.T01:intron 25.0%
!!! TTTTAGCTTCTGTTTTTGTT+AGG + Chr8:69084338-69084357 MsG0880046105.01.T01:intron 25.0%
AACATGGAAATGTTGTAAGA+AGG + Chr8:69085867-69085886 MsG0880046105.01.T01:intron 30.0%
AAGAGATCAAGTTTCTACTT+AGG - Chr8:69087153-69087172 None:intergenic 30.0%
AAGATAATATGCCTCTTCTT+TGG - Chr8:69088065-69088084 None:intergenic 30.0%
AATAGGCTGCAAATTGAAAA+GGG - Chr8:69088375-69088394 None:intergenic 30.0%
AATGCAAATGCTTAGATTGT+AGG + Chr8:69083875-69083894 MsG0880046105.01.T01:intron 30.0%
AGTAGTTAAGTCTTGAGTTA+TGG + Chr8:69084475-69084494 MsG0880046105.01.T01:intron 30.0%
AGTCCAAAAAAATTCAAGAG+TGG + Chr8:69086142-69086161 MsG0880046105.01.T01:intron 30.0%
ATAAGCTTAACCATTCCATA+AGG - Chr8:69084441-69084460 None:intergenic 30.0%
ATCTCAATCAAATGAAAGCA+TGG - Chr8:69086303-69086322 None:intergenic 30.0%
ATGCAAATGCTTAGATTGTA+GGG + Chr8:69083876-69083895 MsG0880046105.01.T01:intron 30.0%
CAAAAATTTCTAATGAGGAG+GGG + Chr8:69086755-69086774 MsG0880046105.01.T01:intron 30.0%
CACTTGGACTAAAATACTTT+GGG - Chr8:69089174-69089193 None:intergenic 30.0%
CTAAGAGTTATGAAATGGAT+TGG + Chr8:69083733-69083752 MsG0880046105.01.T01:intron 30.0%
CTAGGAAGTTGTACAATTAA+AGG - Chr8:69084888-69084907 None:intergenic 30.0%
GCTAGATTTACAAATAACAG+TGG - Chr8:69088537-69088556 None:intergenic 30.0%
GCTTACTTGCTTATATTAAG+TGG + Chr8:69085097-69085116 MsG0880046105.01.T01:intron 30.0%
GGAGTTTATGTACAGATAAA+TGG - Chr8:69085583-69085602 None:intergenic 30.0%
GTAGTTAAGTCTTGAGTTAT+GGG + Chr8:69084476-69084495 MsG0880046105.01.T01:intron 30.0%
GTTAGAAAAAGAGTTTGAGA+CGG - Chr8:69086799-69086818 None:intergenic 30.0%
TAAACAAACGGATCTATTCA+TGG - Chr8:69087281-69087300 None:intergenic 30.0%
TAACTTTGATTACACAGCAA+CGG - Chr8:69086072-69086091 None:intergenic 30.0%
TCAAAATGTAAGGTTGTGTT+TGG + Chr8:69088602-69088621 MsG0880046105.01.T01:intron 30.0%
TCACTTGGACTAAAATACTT+TGG - Chr8:69089175-69089194 None:intergenic 30.0%
TGATGCCTATAACTTCAATA+TGG + Chr8:69084673-69084692 MsG0880046105.01.T01:intron 30.0%
TGATTTACTTGTGTTGGATA+AGG + Chr8:69083650-69083669 MsG0880046105.01.T01:intron 30.0%
TGCTTCTCAATATACTGTTA+AGG + Chr8:69086671-69086690 MsG0880046105.01.T01:intron 30.0%
TTAGTGTTTAAATGGACAAC+TGG + Chr8:69087976-69087995 MsG0880046105.01.T01:intron 30.0%
TTCTCAAATGACCTCATAAA+AGG + Chr8:69086537-69086556 MsG0880046105.01.T01:intron 30.0%
TTGAACTGTTGTATCTACTT+TGG - Chr8:69085961-69085980 None:intergenic 30.0%
TTGCAGTTTATGATTTGATG+AGG + Chr8:69087360-69087379 MsG0880046105.01.T01:CDS 30.0%
TTGTTTCATCGTCATATTGA+AGG - Chr8:69085557-69085576 None:intergenic 30.0%
! AAATAAGCTGTGCCTTTTTA+AGG - Chr8:69089351-69089370 None:intergenic 30.0%
! AATCTTGTTTCCTTCTTTCA+GGG + Chr8:69087305-69087324 MsG0880046105.01.T01:intron 30.0%
! ATTGGTTGATTTACTTGTGT+TGG + Chr8:69083644-69083663 MsG0880046105.01.T01:intron 30.0%
! TAGTGATTTCTTTTCTTGCA+AGG - Chr8:69088430-69088449 None:intergenic 30.0%
! TCTAGAGTATATTCGATTCT+AGG + Chr8:69084226-69084245 MsG0880046105.01.T01:intron 30.0%
! TCTCAATCAAATGAAAGCAT+GGG - Chr8:69086302-69086321 None:intergenic 30.0%
! TTTCTGAAAGAGGATTTGAT+GGG - Chr8:69083345-69083364 None:intergenic 30.0%
!! AAAGCACACTTTTTGTTTGT+TGG + Chr8:69083817-69083836 MsG0880046105.01.T01:intron 30.0%
!! AAGCTTCTTGCTTTGAAATA+TGG + Chr8:69089003-69089022 MsG0880046105.01.T01:intron 30.0%
!! AGTTGTTTCTGACCTTAAAA+AGG + Chr8:69089336-69089355 MsG0880046105.01.T01:CDS 30.0%
!! AGTTTCTTGGTTTTCTTTCA+TGG + Chr8:69083710-69083729 MsG0880046105.01.T01:intron 30.0%
!!! AAACGTTTTTTTAGTGGAGT+GGG + Chr8:69085896-69085915 MsG0880046105.01.T01:intron 30.0%
!!! AGATGTTTTTTTCTTGGAGT+CGG + Chr8:69089238-69089257 MsG0880046105.01.T01:CDS 30.0%
!!! ATTTTTGCTTCAGTTTTGAG+TGG + Chr8:69084376-69084395 MsG0880046105.01.T01:intron 30.0%
!!! CTTGAATTTTTTTGGACTGA+GGG - Chr8:69086140-69086159 None:intergenic 30.0%
!!! TAAACGTTTTTTTAGTGGAG+TGG + Chr8:69085895-69085914 MsG0880046105.01.T01:intron 30.0%
!!! TCCGTGGGAAAATAATTTTT+TGG + Chr8:69088904-69088923 MsG0880046105.01.T01:intron 30.0%
!!! TCTTGAATTTTTTTGGACTG+AGG - Chr8:69086141-69086160 None:intergenic 30.0%
!!! TGATTTTTTGTTTTCGCAAG+AGG - Chr8:69086859-69086878 None:intergenic 30.0%
!!! TGTTTTTTGGAACAGAAACA+AGG + Chr8:69083944-69083963 MsG0880046105.01.T01:intron 30.0%
AACAGTATATTGAGAAGCAG+AGG - Chr8:69086670-69086689 None:intergenic 35.0%
AATGTAAGGTTGTGTTTGGA+TGG + Chr8:69088606-69088625 MsG0880046105.01.T01:intron 35.0%
AGAGGTTTAGTAGAATTGTG+GGG + Chr8:69083840-69083859 MsG0880046105.01.T01:intron 35.0%
AGCAAAGAAACCCTAAAAAG+TGG - Chr8:69084274-69084293 None:intergenic 35.0%
AGCAGATTGAAGCTGATATT+CGG + Chr8:69089146-69089165 MsG0880046105.01.T01:CDS 35.0%
AGGTTATTCCTTTCTCAAGA+GGG + Chr8:69085412-69085431 MsG0880046105.01.T01:intron 35.0%
AGTTCCACTAGTAATTTCTC+TGG + Chr8:69083408-69083427 MsG0880046105.01.T01:CDS 35.0%
ATAATATGCCTCTTCTTTGG+AGG - Chr8:69088062-69088081 None:intergenic 35.0%
ATAGGCTGCAAATTGAAAAG+GGG - Chr8:69088374-69088393 None:intergenic 35.0%
CAAGAGGATAACAAAGACTA+AGG - Chr8:69086843-69086862 None:intergenic 35.0%
CAATAGGCTGCAAATTGAAA+AGG - Chr8:69088376-69088395 None:intergenic 35.0%
CATGGCTAAGAGTTATGAAA+TGG + Chr8:69083728-69083747 MsG0880046105.01.T01:intron 35.0%
GACAATGCATAGTATATGCA+AGG + Chr8:69085746-69085765 MsG0880046105.01.T01:intron 35.0%
GAGAGGTTTAGTAGAATTGT+GGG + Chr8:69083839-69083858 MsG0880046105.01.T01:intron 35.0%
GAGTTATGGGTTCTACTTAA+TGG + Chr8:69084489-69084508 MsG0880046105.01.T01:intron 35.0%
GCAAAGAAACCCTAAAAAGT+GGG - Chr8:69084273-69084292 None:intergenic 35.0%
GGAGTAATAACGATCAATCT+AGG - Chr8:69084906-69084925 None:intergenic 35.0%
GTCGAAATCAAAAATCAAGG+TGG + Chr8:69083786-69083805 MsG0880046105.01.T01:intron 35.0%
GTGCATAGAAAATGAAACTC+TGG + Chr8:69086326-69086345 MsG0880046105.01.T01:intron 35.0%
GTTAAACTACTTACACTGAC+TGG + Chr8:69087482-69087501 MsG0880046105.01.T01:intron 35.0%
TAAAAGAGGAGTCGTTACTA+TGG + Chr8:69083485-69083504 MsG0880046105.01.T01:CDS 35.0%
TAAACAACGCGTAATCAAGT+AGG - Chr8:69084719-69084738 None:intergenic 35.0%
TAGCTATGTAATTCTGGTAC+AGG + Chr8:69088144-69088163 MsG0880046105.01.T01:intron 35.0%
TAGGTTATTCCTTTCTCAAG+AGG + Chr8:69085411-69085430 MsG0880046105.01.T01:intron 35.0%
TATCTGTACATAAACTCCAC+CGG + Chr8:69085585-69085604 MsG0880046105.01.T01:CDS 35.0%
TATTTGTGGATCTTTCTGCT+TGG - Chr8:69087221-69087240 None:intergenic 35.0%
TCACACCCTTGTATTTAGAA+TGG - Chr8:69084992-69085011 None:intergenic 35.0%
TCTACCTAGACAAAACAAGT+TGG - Chr8:69083992-69084011 None:intergenic 35.0%
TCTTAGCTTCTGCTTTAGTT+AGG + Chr8:69084755-69084774 MsG0880046105.01.T01:intron 35.0%
TGAGTATGGAATCATAGACA+AGG + Chr8:69089201-69089220 MsG0880046105.01.T01:CDS 35.0%
TGCAAATGCTTAGATTGTAG+GGG + Chr8:69083877-69083896 MsG0880046105.01.T01:intron 35.0%
TTGGGTCTTAAACTGTATAC+TGG + Chr8:69087440-69087459 MsG0880046105.01.T01:intron 35.0%
TTTGAAAAAAAGTGGAAGGG+TGG - Chr8:69086739-69086758 None:intergenic 35.0%
! CATGGGTTTGTTTGATAAGA+AGG - Chr8:69083280-69083299 None:intergenic 35.0%
! CTTAAACTGTATACTGGCTA+GGG + Chr8:69087446-69087465 MsG0880046105.01.T01:intron 35.0%
! GAATCTTGTTTCCTTCTTTC+AGG + Chr8:69087304-69087323 MsG0880046105.01.T01:intron 35.0%
! GACAGATCAGCATTTTGTAA+CGG - Chr8:69087793-69087812 None:intergenic 35.0%
! GAGTAGCGTATATTTTACCT+CGG - Chr8:69085346-69085365 None:intergenic 35.0%
! GTTTCTGAAAGAGGATTTGA+TGG - Chr8:69083346-69083365 None:intergenic 35.0%
! TCAATATGGTATCTAAAGCG+TGG + Chr8:69084687-69084706 MsG0880046105.01.T01:intron 35.0%
! TCTTAAACTGTATACTGGCT+AGG + Chr8:69087445-69087464 MsG0880046105.01.T01:intron 35.0%
! TTAAACTGTATACTGGCTAG+GGG + Chr8:69087447-69087466 MsG0880046105.01.T01:intron 35.0%
!! ACACTTTTTGTTTGTTGGAG+AGG + Chr8:69083822-69083841 MsG0880046105.01.T01:intron 35.0%
!! AGCTTTACGTAGTTTTACAG+TGG + Chr8:69085051-69085070 MsG0880046105.01.T01:intron 35.0%
!! ATCACTAACCTTTGTTGTTC+CGG - Chr8:69085607-69085626 None:intergenic 35.0%
!! GACTTTTAGTGCTATTGACT+AGG + Chr8:69086512-69086531 MsG0880046105.01.T01:intron 35.0%
!!! AACGTTTTTTTAGTGGAGTG+GGG + Chr8:69085897-69085916 MsG0880046105.01.T01:intron 35.0%
!!! ATCTCGACTTTTGTTGTTGA+AGG - Chr8:69088933-69088952 None:intergenic 35.0%
!!! GAGCCACTCTTGAATTTTTT+TGG - Chr8:69086148-69086167 None:intergenic 35.0%
!!! GTATTTTAGCTCGGATTGTT+AGG + Chr8:69087071-69087090 MsG0880046105.01.T01:intron 35.0%
!!! TAGCTTCTGTTTTTGTTAGG+TGG + Chr8:69084341-69084360 MsG0880046105.01.T01:intron 35.0%
!!! TATGCCAACTTGTTTTGTCT+AGG + Chr8:69083985-69084004 MsG0880046105.01.T01:intron 35.0%
!!! TCTGTTTTTGTTAGGTGGTT+AGG + Chr8:69084346-69084365 MsG0880046105.01.T01:intron 35.0%
!!! TGTTTTTTTTTTGTGGTGGC+CGG - Chr8:69085787-69085806 None:intergenic 35.0%
ACAGTGGCTTCTGACTTATA+TGG + Chr8:69085067-69085086 MsG0880046105.01.T01:intron 40.0%
ACATTTCCATGTTCTGCATC+AGG - Chr8:69085860-69085879 None:intergenic 40.0%
ACCATCAACTCTGTAACAGA+TGG - Chr8:69085519-69085538 None:intergenic 40.0%
ACCCAAAGTTTATAGATCCG+TGG + Chr8:69088888-69088907 MsG0880046105.01.T01:intron 40.0%
ACGCAGAGAGTAAAAATAGG+AGG - Chr8:69088179-69088198 None:intergenic 40.0%
AGCTAAGTCAATCTATCCTG+AGG + Chr8:69086349-69086368 MsG0880046105.01.T01:intron 40.0%
AGCTACCAAAGCTTGATCAT+CGG - Chr8:69084839-69084858 None:intergenic 40.0%
AGTTTCTACTTAGGACCATC+AGG - Chr8:69087144-69087163 None:intergenic 40.0%
ATATCAGCTTCAATCTGCTC+AGG - Chr8:69089145-69089164 None:intergenic 40.0%
ATTAACATGCAAGTACCCAG+AGG - Chr8:69087180-69087199 None:intergenic 40.0%
ATTGAAAAGGGGAACATGGT+TGG - Chr8:69088363-69088382 None:intergenic 40.0%
CAATAATTTATGGCACACCG+AGG + Chr8:69085326-69085345 MsG0880046105.01.T01:intron 40.0%
CACTAGAGTGAAGACAGAAT+TGG + Chr8:69088445-69088464 MsG0880046105.01.T01:CDS 40.0%
CATAGTATATGCAAGGTCTG+GGG + Chr8:69085753-69085772 MsG0880046105.01.T01:intron 40.0%
CCAACGCAGAGAGTAAAAAT+AGG - Chr8:69088182-69088201 None:intergenic 40.0%
CCCAAAGTTTATAGATCCGT+GGG + Chr8:69088889-69088908 MsG0880046105.01.T01:intron 40.0%
CCCACGGATCTATAAACTTT+GGG - Chr8:69088892-69088911 None:intergenic 40.0%
CCTAGGAAGTTGTATACTCT+TGG - Chr8:69084927-69084946 None:intergenic 40.0%
CTTAGGTAGCTTCTACCTTA+TGG + Chr8:69084423-69084442 MsG0880046105.01.T01:intron 40.0%
CTTTCTGCTTGGCAAAGAAA+TGG - Chr8:69087210-69087229 None:intergenic 40.0%
GATGAATAGATCGTAACTCG+AGG - Chr8:69087118-69087137 None:intergenic 40.0%
GCAAATTGAAAAGGGGAACA+TGG - Chr8:69088367-69088386 None:intergenic 40.0%
GCATAGTATATGCAAGGTCT+GGG + Chr8:69085752-69085771 MsG0880046105.01.T01:intron 40.0%
GGAAGGGTGGATAACAAATT+GGG - Chr8:69086726-69086745 None:intergenic 40.0%
GGAGAGGTTTAGTAGAATTG+TGG + Chr8:69083838-69083857 MsG0880046105.01.T01:intron 40.0%
GTAACTCGAGGAATGAAACA+CGG - Chr8:69087106-69087125 None:intergenic 40.0%
GTAGCTTCTACCTTATGGAA+TGG + Chr8:69084428-69084447 MsG0880046105.01.T01:intron 40.0%
GTGACCAGAGAAATTACTAG+TGG - Chr8:69083415-69083434 None:intergenic 40.0%
TAAGGTCAGAAACAACTCCA+TGG - Chr8:69089333-69089352 None:intergenic 40.0%
TAAGGTTGTGTTTGGATGGA+GGG + Chr8:69088610-69088629 MsG0880046105.01.T01:intron 40.0%
TACAGGTAAGAAGCTAAGTC+TGG - Chr8:69085459-69085478 None:intergenic 40.0%
TAGCTTCTGCTTTAGTTAGG+TGG + Chr8:69084758-69084777 MsG0880046105.01.T01:intron 40.0%
TCCATCTGTTACAGAGTTGA+TGG + Chr8:69085515-69085534 MsG0880046105.01.T01:CDS 40.0%
TCCCACGGATCTATAAACTT+TGG - Chr8:69088893-69088912 None:intergenic 40.0%
TGCATAGTATATGCAAGGTC+TGG + Chr8:69085751-69085770 MsG0880046105.01.T01:intron 40.0%
TGGAACAGAAACAAGGTTGT+TGG + Chr8:69083951-69083970 MsG0880046105.01.T01:intron 40.0%
TGGAAGGGTGGATAACAAAT+TGG - Chr8:69086727-69086746 None:intergenic 40.0%
TTGTTTAGTCTCACTTGGCT+TGG + Chr8:69084732-69084751 MsG0880046105.01.T01:intron 40.0%
TTTCTAATGAGGAGGGGATT+AGG + Chr8:69086761-69086780 MsG0880046105.01.T01:intron 40.0%
TTTGACAACCTTGTTCGTGT+TGG + Chr8:69084112-69084131 MsG0880046105.01.T01:CDS 40.0%
! AGAAAAAGAGTTTGAGACGG+TGG - Chr8:69086796-69086815 None:intergenic 40.0%
! AGGATTTGATGGGTCTGATA+GGG - Chr8:69083335-69083354 None:intergenic 40.0%
! CCAAGAGTATACAACTTCCT+AGG + Chr8:69084924-69084943 MsG0880046105.01.T01:intron 40.0%
! GAAAAAGAGTTTGAGACGGT+GGG - Chr8:69086795-69086814 None:intergenic 40.0%
! GGAAATGGAGTTTCTGAAAG+AGG - Chr8:69083355-69083374 None:intergenic 40.0%
! TATATTCGAGAGGGGGTTTT+TGG - Chr8:69088808-69088827 None:intergenic 40.0%
! TATTTAGTGAGCACTAGCCT+AGG - Chr8:69084944-69084963 None:intergenic 40.0%
!! ATATTCGATTCTAGGACCTG+TGG + Chr8:69084234-69084253 MsG0880046105.01.T01:intron 40.0%
!! TATTCGATTCTAGGACCTGT+GGG + Chr8:69084235-69084254 MsG0880046105.01.T01:intron 40.0%
!! TTGATGATGGCAAAGCAGAA+CGG - Chr8:69088256-69088275 None:intergenic 40.0%
!!! AATTTTTTTGGACTGAGGGC+AGG - Chr8:69086136-69086155 None:intergenic 40.0%
!!! CCTATTTTTACTCTCTGCGT+TGG + Chr8:69088179-69088198 MsG0880046105.01.T01:CDS 40.0%
!!! GTTTTTTTTTTGTGGTGGCC+GGG - Chr8:69085786-69085805 None:intergenic 40.0%
!!! TATGGGCTCGTGATTTTTTG+AGG + Chr8:69086449-69086468 MsG0880046105.01.T01:intron 40.0%
!!! TTTTTTTTTTGTGGTGGCCG+GGG - Chr8:69085785-69085804 None:intergenic 40.0%
AAACTCCACCGGAACAACAA+AGG + Chr8:69085596-69085615 MsG0880046105.01.T01:CDS 45.0%
AAACTTTGGGTCTGTTCGAG+AGG - Chr8:69088879-69088898 None:intergenic 45.0%
AACTTTGGGTCTGTTCGAGA+GGG - Chr8:69088878-69088897 None:intergenic 45.0%
ACGCGTTGTTTAGTCTCACT+TGG + Chr8:69084727-69084746 MsG0880046105.01.T01:intron 45.0%
ACTGAGGGCAGGATATAAAC+AGG - Chr8:69086125-69086144 None:intergenic 45.0%
ACTTGATCTCTTGTTGCCTC+TGG + Chr8:69087161-69087180 MsG0880046105.01.T01:intron 45.0%
AGGTAAGAAGCTAAGTCTGG+TGG - Chr8:69085456-69085475 None:intergenic 45.0%
CACATTGACCAACACGAACA+AGG - Chr8:69084123-69084142 None:intergenic 45.0%
CCAAGTGAAGCTGTTGAGTA+TGG + Chr8:69089187-69089206 MsG0880046105.01.T01:CDS 45.0%
CCAATGATGTCTTCCTCATG+CGG + Chr8:69086381-69086400 MsG0880046105.01.T01:intron 45.0%
CCATACTCAACAGCTTCACT+TGG - Chr8:69089190-69089209 None:intergenic 45.0%
CTTGATCTCTTGTTGCCTCT+GGG + Chr8:69087162-69087181 MsG0880046105.01.T01:intron 45.0%
CTTGTTTCCTTCTTTCAGGG+AGG + Chr8:69087308-69087327 MsG0880046105.01.T01:intron 45.0%
GAAGAGGGTGAAATGAGCAT+GGG - Chr8:69083297-69083316 None:intergenic 45.0%
GAAGGTGAAAGATGCGTTTG+CGG - Chr8:69083262-69083281 None:intergenic 45.0%
GATAACAAATTGGGCCTGCT+TGG - Chr8:69086717-69086736 None:intergenic 45.0%
GATCTATTCATCCCTCCTGA+TGG + Chr8:69087126-69087145 MsG0880046105.01.T01:intron 45.0%
GCTACCAAAGCTTGATCATC+GGG - Chr8:69084838-69084857 None:intergenic 45.0%
GTAAGGTTGTGTTTGGATGG+AGG + Chr8:69088609-69088628 MsG0880046105.01.T01:intron 45.0%
GTGGCTTCTGACTTATATGG+TGG + Chr8:69085070-69085089 MsG0880046105.01.T01:intron 45.0%
GTTAGGGTTCGTGATGAAGA+GGG - Chr8:69083312-69083331 None:intergenic 45.0%
TAAGAAGCTAAGTCTGGTGG+AGG - Chr8:69085453-69085472 None:intergenic 45.0%
TCAATTTGCAGCCTATTGCG+CGG + Chr8:69088378-69088397 MsG0880046105.01.T01:intron 45.0%
TCCACCAAGTAACATGTCTG+CGG - Chr8:69087856-69087875 None:intergenic 45.0%
TCTACTTAGGACCATCAGGA+GGG - Chr8:69087140-69087159 None:intergenic 45.0%
TGAAGAGGGTGAAATGAGCA+TGG - Chr8:69083298-69083317 None:intergenic 45.0%
TGTGTTTGGATGGAGGGTTT+AGG + Chr8:69088616-69088635 MsG0880046105.01.T01:intron 45.0%
TTCTACTTAGGACCATCAGG+AGG - Chr8:69087141-69087160 None:intergenic 45.0%
TTCTCCCGATGATCAAGCTT+TGG + Chr8:69084831-69084850 MsG0880046105.01.T01:intron 45.0%
TTGTTCAGCGTCACTTGACT+TGG + Chr8:69084315-69084334 MsG0880046105.01.T01:intron 45.0%
TTTCAGGGAGGTGAGAAGTT+GGG + Chr8:69087320-69087339 MsG0880046105.01.T01:intron 45.0%
TTTCTCAAGAGGGACTGCAT+GGG + Chr8:69085422-69085441 MsG0880046105.01.T01:CDS 45.0%
TTTGGATGGAGGGTTTAGGA+GGG + Chr8:69088620-69088639 MsG0880046105.01.T01:intron 45.0%
! ATATGCCTCTTCTTTGGAGG+TGG - Chr8:69088059-69088078 None:intergenic 45.0%
! CAGGTGTTGTACAATGAGAG+GGG + Chr8:69089298-69089317 MsG0880046105.01.T01:CDS 45.0%
! CTTGTTCGTGTTGGTCAATG+TGG + Chr8:69084121-69084140 MsG0880046105.01.T01:CDS 45.0%
! GAGGATTTGATGGGTCTGAT+AGG - Chr8:69083336-69083355 None:intergenic 45.0%
! GATGACATCGGCCTTTTATG+AGG - Chr8:69086551-69086570 None:intergenic 45.0%
! GCAGGTGTTGTACAATGAGA+GGG + Chr8:69089297-69089316 MsG0880046105.01.T01:CDS 45.0%
! GGATTTGATGGGTCTGATAG+GGG - Chr8:69083334-69083353 None:intergenic 45.0%
! TATGCCTCTTCTTTGGAGGT+GGG - Chr8:69088058-69088077 None:intergenic 45.0%
! TGAGCTTAGCTCAGTTGGTA+TGG + Chr8:69085724-69085743 MsG0880046105.01.T01:intron 45.0%
! TGCAGGTGTTGTACAATGAG+AGG + Chr8:69089296-69089315 MsG0880046105.01.T01:CDS 45.0%
!! ACTAACCTTTGTTGTTCCGG+TGG - Chr8:69085604-69085623 None:intergenic 45.0%
!! TTTTTAGTGGAGTGGGGCAT+AGG + Chr8:69085903-69085922 MsG0880046105.01.T01:intron 45.0%
!!! AAAAAAAAACATTTTTTTTA+TGG + Chr8:69085796-69085815 MsG0880046105.01.T01:intron 5.0%
AAACGACGACGCATCACAGT+AGG - Chr8:69086588-69086607 None:intergenic 50.0%
AAATGTCCACACGCCACTGT+CGG - Chr8:69086642-69086661 None:intergenic 50.0%
ACATTGTGCTGCGCTGCATA+TGG + Chr8:69086431-69086450 MsG0880046105.01.T01:intron 50.0%
AGCGACGAAATCGGTGGAAA+TGG - Chr8:69083370-69083389 None:intergenic 50.0%
ATATGCAGCGCAGCACAATG+TGG - Chr8:69086432-69086451 None:intergenic 50.0%
CATGCAGTCCCTCTTGAGAA+AGG - Chr8:69085423-69085442 None:intergenic 50.0%
CATGCGGACGCACAATCTTA+CGG + Chr8:69086397-69086416 MsG0880046105.01.T01:intron 50.0%
CATTGTGCTGCGCTGCATAT+GGG + Chr8:69086432-69086451 MsG0880046105.01.T01:intron 50.0%
CCGCATGAGGAAGACATCAT+TGG - Chr8:69086384-69086403 None:intergenic 50.0%
CCTGCTTGGTTCAGTTGGAA+GGG - Chr8:69086703-69086722 None:intergenic 50.0%
CTGCTTGGTTCAGTTGGAAG+GGG - Chr8:69086702-69086721 None:intergenic 50.0%
CTTCTCACCTCCCTGAAAGA+AGG - Chr8:69087318-69087337 None:intergenic 50.0%
CTTTCAGGGAGGTGAGAAGT+TGG + Chr8:69087319-69087338 MsG0880046105.01.T01:intron 50.0%
CTTTCTCAAGAGGGACTGCA+TGG + Chr8:69085421-69085440 MsG0880046105.01.T01:CDS 50.0%
GAACTGCCTGATGCAGAACA+TGG + Chr8:69085851-69085870 MsG0880046105.01.T01:intron 50.0%
GACGCTGAACAACGCAAAGT+CGG - Chr8:69084307-69084326 None:intergenic 50.0%
GATGGGTCTGATAGGGGTTA+GGG - Chr8:69083328-69083347 None:intergenic 50.0%
GGTTAGGGTTCGTGATGAAG+AGG - Chr8:69083313-69083332 None:intergenic 50.0%
GTACAATGAGAGGGGCTCTA+AGG + Chr8:69089306-69089325 MsG0880046105.01.T01:CDS 50.0%
GTTTGGATGGAGGGTTTAGG+AGG + Chr8:69088619-69088638 MsG0880046105.01.T01:intron 50.0%
TAAGATTGTGCGTCCGCATG+AGG - Chr8:69086397-69086416 None:intergenic 50.0%
TATGCAGCGCAGCACAATGT+GGG - Chr8:69086431-69086450 None:intergenic 50.0%
TCTGTTCGAGAGGGAGTTTC+TGG - Chr8:69088869-69088888 None:intergenic 50.0%
TGACCTTGAAACCGCGCAAT+AGG - Chr8:69088392-69088411 None:intergenic 50.0%
TGCACCAGCAGCCAAAAGTA+AGG - Chr8:69088225-69088244 None:intergenic 50.0%
TGTGCCGCAGACATGTTACT+TGG + Chr8:69087849-69087868 MsG0880046105.01.T01:intron 50.0%
! AACGACTCCTCTTTTACCGC+CGG - Chr8:69083481-69083500 None:intergenic 50.0%
! AGGGGAACATGGTTGGTGTT+TGG - Chr8:69088356-69088375 None:intergenic 50.0%
! AGTGGAACTACTGATTGCCG+TGG - Chr8:69083397-69083416 None:intergenic 50.0%
! ATGCCTCTTCTTTGGAGGTG+GGG - Chr8:69088057-69088076 None:intergenic 50.0%
! GAACTACTGATTGCCGTGGA+AGG - Chr8:69083393-69083412 None:intergenic 50.0%
! GTTTGAGACGGTGGGTCAAA+AGG - Chr8:69086787-69086806 None:intergenic 50.0%
! TCTCTGCGTTGGCAATGCTT+GGG + Chr8:69088190-69088209 MsG0880046105.01.T01:CDS 50.0%
! TGATGGGTCTGATAGGGGTT+AGG - Chr8:69083329-69083348 None:intergenic 50.0%
! TTCGAGAGGGAGTTTCTGGA+GGG - Chr8:69088865-69088884 None:intergenic 50.0%
! TTGGAGGGTAGGGTTTTGCA+GGG - Chr8:69088789-69088808 None:intergenic 50.0%
! TTTGAAACGTCGCGGGATTG+AGG - Chr8:69083455-69083474 None:intergenic 50.0%
! TTTGGAGGGTAGGGTTTTGC+AGG - Chr8:69088790-69088809 None:intergenic 50.0%
!! ACTTTTGGCTGCTGGTGCAA+AGG + Chr8:69088226-69088245 MsG0880046105.01.T01:CDS 50.0%
!! ATTCGAGAGGGGGTTTTTGG+AGG - Chr8:69088805-69088824 None:intergenic 50.0%
!! ATTCTAGGACCTGTGGGTTG+TGG + Chr8:69084241-69084260 MsG0880046105.01.T01:intron 50.0%
!! CTTTTGGCTGCTGGTGCAAA+GGG + Chr8:69088227-69088246 MsG0880046105.01.T01:CDS 50.0%
!! TCATTGGCTCGTAGTACCTC+AGG - Chr8:69086368-69086387 None:intergenic 50.0%
!! TTCGAGAGGGGGTTTTTGGA+GGG - Chr8:69088804-69088823 None:intergenic 50.0%
!! TTCTAGGACCTGTGGGTTGT+GGG + Chr8:69084242-69084261 MsG0880046105.01.T01:intron 50.0%
AGGTGGGGTTGTGCAGTGAT+GGG - Chr8:69088042-69088061 None:intergenic 55.0%
ATGGAGGGTTTAGGAGGGCA+GGG + Chr8:69088625-69088644 MsG0880046105.01.T01:intron 55.0%
CAAAGCTCCGGCGGTAAAAG+AGG + Chr8:69083471-69083490 MsG0880046105.01.T01:CDS 55.0%
CAACCCCACCTCCAAAGAAG+AGG + Chr8:69088051-69088070 MsG0880046105.01.T01:intron 55.0%
CAGCCTATTGCGCGGTTTCA+AGG + Chr8:69088386-69088405 MsG0880046105.01.T01:intron 55.0%
CCAACTGAGCTAAGCTCACC+AGG - Chr8:69085722-69085741 None:intergenic 55.0%
CCCTTCCAACTGAACCAAGC+AGG + Chr8:69086700-69086719 MsG0880046105.01.T01:intron 55.0%
CCTGGTGAGCTTAGCTCAGT+TGG + Chr8:69085719-69085738 MsG0880046105.01.T01:intron 55.0%
CGATTTCGTCGCTCCTTCCA+CGG + Chr8:69083377-69083396 MsG0880046105.01.T01:CDS 55.0%
CGCAGCACAATGTGGGATCA+TGG - Chr8:69086424-69086443 None:intergenic 55.0%
CGTGGAAGGAGCGACGAAAT+CGG - Chr8:69083379-69083398 None:intergenic 55.0%
GCCTGCTTGGTTCAGTTGGA+AGG - Chr8:69086704-69086723 None:intergenic 55.0%
GCGCAAGGAGGAGATGACAT+CGG - Chr8:69086563-69086582 None:intergenic 55.0%
TAACATGTCTGCGGCACAGC+AGG - Chr8:69087847-69087866 None:intergenic 55.0%
TCTCTCTGTGCATCCGACAG+TGG + Chr8:69086626-69086645 MsG0880046105.01.T01:intron 55.0%
TGCAGGGACTTCTGCACGTT+GGG - Chr8:69088103-69088122 None:intergenic 55.0%
TTGGGCCTGCTTGGTTCAGT+TGG - Chr8:69086708-69086727 None:intergenic 55.0%
! AAGGTCTGGGGTTCAAACCC+CGG + Chr8:69085765-69085784 MsG0880046105.01.T01:intron 55.0%
! CTCTCTGCGTTGGCAATGCT+TGG + Chr8:69088189-69088208 MsG0880046105.01.T01:CDS 55.0%
! CTCTGCGTTGGCAATGCTTG+GGG + Chr8:69088191-69088210 MsG0880046105.01.T01:CDS 55.0%
! GCCGCAGACATGTTACTTGG+TGG + Chr8:69087852-69087871 MsG0880046105.01.T01:intron 55.0%
! GGGAGAGGCAGCCTTACTTT+TGG + Chr8:69088211-69088230 MsG0880046105.01.T01:CDS 55.0%
! GTTCGAGAGGGAGTTTCTGG+AGG - Chr8:69088866-69088885 None:intergenic 55.0%
! TCGAGAGGGAGTTTCTGGAG+GGG - Chr8:69088864-69088883 None:intergenic 55.0%
! TCTAGGACCTGTGGGTTGTG+GGG + Chr8:69084243-69084262 MsG0880046105.01.T01:intron 55.0%
!! AGAGGGGGTTTTTGGAGGGT+AGG - Chr8:69088800-69088819 None:intergenic 55.0%
!! GAGGGGGTTTTTGGAGGGTA+GGG - Chr8:69088799-69088818 None:intergenic 55.0%
!! GCAGCCTTACTTTTGGCTGC+TGG + Chr8:69088218-69088237 MsG0880046105.01.T01:CDS 55.0%
!!! TGGGGACGGCCCACTTTTTA+GGG + Chr8:69084261-69084280 MsG0880046105.01.T01:intron 55.0%
AACGTCGCGGGATTGAGGCA+CGG - Chr8:69083450-69083469 None:intergenic 60.0%
CCCGCGACGTTTCAAAGCTC+CGG + Chr8:69083459-69083478 MsG0880046105.01.T01:CDS 60.0%
CGACGACGCATCACAGTAGG+AGG - Chr8:69086585-69086604 None:intergenic 60.0%
CGTTGGCAATGCTTGGGGAG+AGG + Chr8:69088196-69088215 MsG0880046105.01.T01:CDS 60.0%
CTGCAGGGACTTCTGCACGT+TGG - Chr8:69088104-69088123 None:intergenic 60.0%
CTGGAGGGGAGGGTTTCGAA+GGG - Chr8:69088850-69088869 None:intergenic 60.0%
GAGGTGGGGTTGTGCAGTGA+TGG - Chr8:69088043-69088062 None:intergenic 60.0%
GATGGAGGGTTTAGGAGGGC+AGG + Chr8:69088624-69088643 MsG0880046105.01.T01:intron 60.0%
GCGACGTTTCAAAGCTCCGG+CGG + Chr8:69083462-69083481 MsG0880046105.01.T01:CDS 60.0%
GGAAGGAGCGACGAAATCGG+TGG - Chr8:69083376-69083395 None:intergenic 60.0%
TCTGGAGGGGAGGGTTTCGA+AGG - Chr8:69088851-69088870 None:intergenic 60.0%
! AGAGGGAGTTTCTGGAGGGG+AGG - Chr8:69088861-69088880 None:intergenic 60.0%
! GAGGGAGTTTCTGGAGGGGA+GGG - Chr8:69088860-69088879 None:intergenic 60.0%
! GCATCACAGTAGGAGGCGCA+AGG - Chr8:69086578-69086597 None:intergenic 60.0%
! GGGTAGGGTTTTGCAGGGCT+AGG - Chr8:69088784-69088803 None:intergenic 60.0%
! TCACAGTAGGAGGCGCAAGG+AGG - Chr8:69086575-69086594 None:intergenic 60.0%
!! CCGGAGCTTTGAAACGTCGC+GGG - Chr8:69083462-69083481 None:intergenic 60.0%
!! GAGAGGGGCTCTAAGGACCA+TGG + Chr8:69089313-69089332 MsG0880046105.01.T01:CDS 60.0%
!! GCCGGAGCTTTGAAACGTCG+CGG - Chr8:69083463-69083482 None:intergenic 60.0%
!!! GTGGGGACGGCCCACTTTTT+AGG + Chr8:69084260-69084279 MsG0880046105.01.T01:intron 60.0%
CGATCGCGCATGCGCGAAGA+AGG + Chr8:69086482-69086501 MsG0880046105.01.T01:intron 65.0%
CGGCACAGCAGGACTGTGAC+AGG - Chr8:69087836-69087855 None:intergenic 65.0%
CGGGATTGAGGCACGGAGGA+CGG - Chr8:69083443-69083462 None:intergenic 65.0%
GTGCATCCGACAGTGGCGTG+TGG + Chr8:69086633-69086652 MsG0880046105.01.T01:intron 65.0%
! GGACCTGTGGGTTGTGGGGA+CGG + Chr8:69084247-69084266 MsG0880046105.01.T01:intron 65.0%
GTCGCGGGATTGAGGCACGG+AGG - Chr8:69083447-69083466 None:intergenic 70.0%
GGGCCGTCCCCACAACCCAC+AGG - Chr8:69084253-69084272 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr8 gene 69083246 69089372 69083246 ID=MsG0880046105.01;Name=MsG0880046105.01
Chr8 mRNA 69083246 69089372 69083246 ID=MsG0880046105.01.T01;Parent=MsG0880046105.01;Name=MsG0880046105.01.T01;_AED=0.45;_eAED=0.53;_QI=0|0.66|0.57|1|0.66|0.71|7|0|361
Chr8 exon 69083246 69083544 69083246 ID=MsG0880046105.01.T01:exon:15751;Parent=MsG0880046105.01.T01
Chr8 exon 69084087 69084144 69084087 ID=MsG0880046105.01.T01:exon:15752;Parent=MsG0880046105.01.T01
Chr8 exon 69085414 69085617 69085414 ID=MsG0880046105.01.T01:exon:15753;Parent=MsG0880046105.01.T01
Chr8 exon 69087326 69087381 69087326 ID=MsG0880046105.01.T01:exon:15754;Parent=MsG0880046105.01.T01
Chr8 exon 69088166 69088292 69088166 ID=MsG0880046105.01.T01:exon:15755;Parent=MsG0880046105.01.T01
Chr8 exon 69088389 69088466 69088389 ID=MsG0880046105.01.T01:exon:15756;Parent=MsG0880046105.01.T01
Chr8 exon 69089109 69089372 69089109 ID=MsG0880046105.01.T01:exon:15757;Parent=MsG0880046105.01.T01
Chr8 CDS 69083246 69083544 69083246 ID=MsG0880046105.01.T01:cds;Parent=MsG0880046105.01.T01
Chr8 CDS 69084087 69084144 69084087 ID=MsG0880046105.01.T01:cds;Parent=MsG0880046105.01.T01
Chr8 CDS 69085414 69085617 69085414 ID=MsG0880046105.01.T01:cds;Parent=MsG0880046105.01.T01
Chr8 CDS 69087326 69087381 69087326 ID=MsG0880046105.01.T01:cds;Parent=MsG0880046105.01.T01
Chr8 CDS 69088166 69088292 69088166 ID=MsG0880046105.01.T01:cds;Parent=MsG0880046105.01.T01
Chr8 CDS 69088389 69088466 69088389 ID=MsG0880046105.01.T01:cds;Parent=MsG0880046105.01.T01
Chr8 CDS 69089109 69089372 69089109 ID=MsG0880046105.01.T01:cds;Parent=MsG0880046105.01.T01
Gene Sequence

>MsG0880046105.01.T01

ATGGAGGTTGCAACCGCAAACGCATCTTTCACCTTCTTATCAAACAAACCCATGCTCATTTCACCCTCTTCATCACGAACCCTAACCCCTATCAGACCCATCAAATCCTCTTTCAGAAACTCCATTTCCACCGATTTCGTCGCTCCTTCCACGGCAATCAGTAGTTCCACTAGTAATTTCTCTGGTCACAAGCTCCGTCCTCCGTGCCTCAATCCCGCGACGTTTCAAAGCTCCGGCGGTAAAAGAGGAGTCGTTACTATGGTATTTTTTCAATCAACTTTCACATTTTCATTTCTAATGCGATTTTATGAGTTTAAACTCGATTTTGACAACCTTGTTCGTGTTGGTCAATGTGGCGTTATTCCTTTCTCAAGAGGGACTGCATGGGAGCAACCTCCACCAGACTTAGCTTCTTACCTGTACAAAAATCGAATTGTTTACTTGGGCATGTCTCTCGTTCCATCTGTTACAGAGTTGATGGTTGCTGAATTTCTTTACCTTCAATATGACGATGAAACAAAACCCATTTATCTGTACATAAACTCCACCGGAACAACAAAGGGAGGTGAGAAGTTGGGTTATGAGACTGAAGCACTTGCAGTTTATGATTTGATGAGGTACATCAAGCCTCCTATTTTTACTCTCTGCGTTGGCAATGCTTGGGGAGAGGCAGCCTTACTTTTGGCTGCTGGTGCAAAGGGTAACCGTTCTGCTTTGCCATCATCAACTATAATGATAAGACAGCCTATTGCGCGGTTTCAAGGTCAAGCAACAGACGTCAACCTTGCAAGAAAAGAAATCACTAGAGTGAAGACAGAATTGGTTAATTTGTTAGCAAAGCACACTGAAAAAACACCTGAGCAGATTGAAGCTGATATTCGGCGCCCAAAGTATTTTAGTCCAAGTGAAGCTGTTGAGTATGGAATCATAGACAAGGTATTTTCCATAACTAGATGTTTTTTTCTTGGAGTCGGTTATTTACCAAGCAAACTAAAATATATGGTCTTTTTGCAGGTGTTGTACAATGAGAGGGGCTCTAAGGACCATGGAGTTGTTTCTGACCTTAAAAAGGCACAGCTTATTTGA

Protein sequence

>MsG0880046105.01.T01

MEVATANASFTFLSNKPMLISPSSSRTLTPIRPIKSSFRNSISTDFVAPSTAISSSTSNFSGHKLRPPCLNPATFQSSGGKRGVVTMVFFQSTFTFSFLMRFYEFKLDFDNLVRVGQCGVIPFSRGTAWEQPPPDLASYLYKNRIVYLGMSLVPSVTELMVAEFLYLQYDDETKPIYLYINSTGTTKGGEKLGYETEALAVYDLMRYIKPPIFTLCVGNAWGEAALLLAAGAKGNRSALPSSTIMIRQPIARFQGQATDVNLARKEITRVKTELVNLLAKHTEKTPEQIEADIRRPKYFSPSEAVEYGIIDKVFSITRCFFLGVGYLPSKLKYMVFLQVLYNERGSKDHGVVSDLKKAQLI*