Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036953.01.T01 | XP_003621869.1 | 96.531 | 663 | 8 | 1 | 1 | 663 | 1 | 648 | 0 | 1306 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036953.01.T01 | P22953 | 89.339 | 666 | 53 | 2 | 1 | 663 | 1 | 651 | 0 | 1215 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036953.01.T01 | G7KWU8 | 96.531 | 663 | 8 | 1 | 1 | 663 | 1 | 648 | 0.0 | 1306 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180000494.01 | MsG0780036953.01 | 0.813413 | 2.592538e-51 | 1.691930e-48 |
| MsG0180000555.01 | MsG0780036953.01 | 0.816908 | 4.339434e-52 | 3.114622e-49 |
| MsG0180000741.01 | MsG0780036953.01 | 0.815463 | 9.126390e-52 | 6.296814e-49 |
| MsG0180004598.01 | MsG0780036953.01 | 0.803409 | 3.534812e-49 | 1.774963e-46 |
| MsG0280010816.01 | MsG0780036953.01 | 0.809513 | 1.822912e-50 | 1.072421e-47 |
| MsG0280010976.01 | MsG0780036953.01 | 0.805518 | 1.284028e-49 | 6.806964e-47 |
| MsG0680034757.01 | MsG0780036953.01 | 0.802696 | 4.963299e-49 | 2.447328e-46 |
| MsG0480021900.01 | MsG0780036953.01 | 0.803971 | 2.702632e-49 | 1.376870e-46 |
| MsG0480022026.01 | MsG0780036953.01 | 0.818108 | 2.328078e-52 | 1.726802e-49 |
| MsG0480022318.01 | MsG0780036953.01 | 0.805170 | 1.519412e-49 | 7.983303e-47 |
| MsG0580024205.01 | MsG0780036953.01 | 0.802473 | 5.517508e-49 | 2.705154e-46 |
| MsG0580024374.01 | MsG0780036953.01 | 0.824160 | 9.383897e-54 | 8.246293e-51 |
| MsG0580024996.01 | MsG0780036953.01 | 0.809168 | 2.161663e-50 | 1.260105e-47 |
| MsG0380016753.01 | MsG0780036953.01 | 0.801628 | 8.231723e-49 | 3.949926e-46 |
| MsG0380017229.01 | MsG0780036953.01 | 0.832626 | 8.493260e-56 | 9.546263e-53 |
| MsG0580030003.01 | MsG0780036953.01 | 0.823957 | 1.047067e-53 | 9.149101e-51 |
| MsG0280006906.01 | MsG0780036953.01 | 0.814128 | 1.803704e-51 | 1.200120e-48 |
| MsG0280006935.01 | MsG0780036953.01 | 0.815753 | 7.864282e-52 | 5.469451e-49 |
| MsG0280007984.01 | MsG0780036953.01 | 0.802856 | 4.599898e-49 | 2.277384e-46 |
| MsG0280007987.01 | MsG0780036953.01 | 0.808681 | 2.748409e-50 | 1.581412e-47 |
| MsG0280008295.01 | MsG0780036953.01 | 0.800329 | 1.516653e-48 | 7.042686e-46 |
| MsG0780036633.01 | MsG0780036953.01 | 0.808796 | 2.596461e-50 | 1.498508e-47 |
| MsG0780036773.01 | MsG0780036953.01 | 0.801564 | 8.485204e-49 | 4.065078e-46 |
| MsG0780036951.01 | MsG0780036953.01 | 0.917793 | 3.443001e-86 | 1.013092e-81 |
| MsG0780036953.01 | MsG0780036966.01 | 0.812414 | 4.291087e-51 | 2.726726e-48 |
| MsG0780036953.01 | MsG0780037755.01 | 0.807264 | 5.501898e-50 | 3.050743e-47 |
| MsG0780036953.01 | MsG0780040516.01 | 0.809459 | 1.872372e-50 | 1.099929e-47 |
| MsG0780036953.01 | MsG0780041310.01 | 0.803279 | 3.760414e-49 | 1.881946e-46 |
| MsG0780036953.01 | MsG0780041370.01 | 0.801989 | 6.938702e-49 | 3.360199e-46 |
| MsG0780036953.01 | MsG0880043116.01 | 0.816165 | 6.365988e-52 | 4.477246e-49 |
| MsG0780036953.01 | MsG0880043162.01 | 0.802399 | 5.715498e-49 | 2.797036e-46 |
| MsG0780036953.01 | MsG0880043522.01 | 0.807979 | 3.878498e-50 | 2.190977e-47 |
| MsG0780036953.01 | MsG0880046560.01 | 0.818758 | 1.658578e-52 | 1.252535e-49 |
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0780036953.01 | MsG0780040848.01 | PPI |
| MsG0780040848.01 | MsG0780036953.01 | PPI |
| MsG0780036966.01 | MsG0780036953.01 | PPI |
| MsG0680032925.01 | MsG0780036953.01 | PPI |
| MsG0780036953.01 | MsG0780040847.01 | PPI |
| MsG0680032925.01 | MsG0780036953.01 | PPI |
| MsG0780036953.01 | MsG0280007723.01 | PPI |
| MsG0780036953.01 | MsG0780036966.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036953.01.T01 | MTR_7g024390 | 96.531 | 663 | 8 | 1 | 1 | 663 | 1 | 648 | 0.0 | 1306 |
| MsG0780036953.01.T01 | MTR_7g099680 | 91.717 | 664 | 39 | 2 | 1 | 663 | 1 | 649 | 0.0 | 1245 |
| MsG0780036953.01.T01 | MTR_7g024580 | 90.555 | 667 | 41 | 4 | 1 | 663 | 1 | 649 | 0.0 | 1228 |
| MsG0780036953.01.T01 | MTR_4g063710 | 89.925 | 665 | 49 | 3 | 1 | 663 | 1 | 649 | 0.0 | 1210 |
| MsG0780036953.01.T01 | MTR_4g063720 | 90.240 | 666 | 45 | 3 | 1 | 663 | 1 | 649 | 0.0 | 1209 |
| MsG0780036953.01.T01 | MTR_4g130540 | 84.454 | 669 | 82 | 3 | 1 | 663 | 1 | 653 | 0.0 | 1139 |
| MsG0780036953.01.T01 | MTR_6g033850 | 66.032 | 630 | 198 | 2 | 1 | 630 | 1 | 614 | 0.0 | 843 |
| MsG0780036953.01.T01 | MTR_7g025760 | 64.465 | 636 | 207 | 4 | 1 | 634 | 1 | 619 | 0.0 | 827 |
| MsG0780036953.01.T01 | MTR_6g033760 | 65.135 | 631 | 204 | 2 | 1 | 631 | 1 | 615 | 0.0 | 826 |
| MsG0780036953.01.T01 | MTR_7g026030 | 64.308 | 636 | 207 | 5 | 1 | 634 | 1 | 618 | 0.0 | 821 |
| MsG0780036953.01.T01 | MTR_2g017730 | 65.484 | 620 | 179 | 4 | 9 | 622 | 8 | 598 | 0.0 | 816 |
| MsG0780036953.01.T01 | MTR_5g066800 | 62.986 | 643 | 208 | 5 | 1 | 630 | 1 | 626 | 0.0 | 811 |
| MsG0780036953.01.T01 | MTR_7g021440 | 63.968 | 630 | 208 | 4 | 1 | 628 | 1 | 613 | 0.0 | 811 |
| MsG0780036953.01.T01 | MTR_2g038260 | 64.984 | 634 | 200 | 7 | 1 | 630 | 1 | 616 | 0.0 | 810 |
| MsG0780036953.01.T01 | MTR_2g032550 | 64.490 | 628 | 204 | 4 | 6 | 630 | 7 | 618 | 0.0 | 806 |
| MsG0780036953.01.T01 | MTR_8g032650 | 64.308 | 636 | 207 | 5 | 1 | 634 | 1 | 618 | 0.0 | 804 |
| MsG0780036953.01.T01 | MTR_7g025820 | 65.033 | 612 | 195 | 4 | 1 | 610 | 1 | 595 | 0.0 | 800 |
| MsG0780036953.01.T01 | MTR_7g025720 | 63.208 | 636 | 214 | 5 | 1 | 634 | 1 | 618 | 0.0 | 800 |
| MsG0780036953.01.T01 | MTR_7g451380 | 63.033 | 633 | 215 | 4 | 1 | 630 | 1 | 617 | 0.0 | 797 |
| MsG0780036953.01.T01 | MTR_7g026110 | 62.184 | 632 | 218 | 6 | 1 | 630 | 1 | 613 | 0.0 | 793 |
| MsG0780036953.01.T01 | MTR_8g099945 | 63.752 | 629 | 207 | 5 | 7 | 633 | 36 | 645 | 0.0 | 791 |
| MsG0780036953.01.T01 | MTR_8g099795 | 63.911 | 629 | 206 | 5 | 7 | 633 | 36 | 645 | 0.0 | 791 |
| MsG0780036953.01.T01 | MTR_7g025790 | 63.033 | 633 | 214 | 5 | 1 | 631 | 1 | 615 | 0.0 | 790 |
| MsG0780036953.01.T01 | MTR_7g024030 | 63.259 | 626 | 210 | 5 | 1 | 624 | 1 | 608 | 0.0 | 787 |
| MsG0780036953.01.T01 | MTR_7g025620 | 63.360 | 625 | 209 | 5 | 1 | 623 | 1 | 607 | 0.0 | 787 |
| MsG0780036953.01.T01 | MTR_7g025630 | 62.736 | 636 | 203 | 7 | 1 | 634 | 1 | 604 | 0.0 | 779 |
| MsG0780036953.01.T01 | MTR_7g078190 | 62.500 | 640 | 216 | 8 | 1 | 634 | 1 | 622 | 0.0 | 778 |
| MsG0780036953.01.T01 | MTR_7g026090 | 62.857 | 630 | 213 | 4 | 1 | 628 | 1 | 611 | 0.0 | 778 |
| MsG0780036953.01.T01 | MTR_7g029415 | 62.798 | 629 | 211 | 8 | 6 | 630 | 13 | 622 | 0.0 | 775 |
| MsG0780036953.01.T01 | MTR_6g033870 | 61.755 | 638 | 222 | 4 | 5 | 636 | 6 | 627 | 0.0 | 773 |
| MsG0780036953.01.T01 | MTR_2g022050 | 63.507 | 633 | 212 | 4 | 1 | 630 | 1 | 617 | 0.0 | 773 |
| MsG0780036953.01.T01 | MTR_4g079590 | 61.981 | 626 | 218 | 5 | 1 | 623 | 1 | 609 | 0.0 | 772 |
| MsG0780036953.01.T01 | MTR_7g025740 | 61.830 | 634 | 213 | 7 | 1 | 623 | 1 | 616 | 0.0 | 770 |
| MsG0780036953.01.T01 | MTR_7g025770 | 61.295 | 633 | 225 | 5 | 1 | 630 | 1 | 616 | 0.0 | 768 |
| MsG0780036953.01.T01 | MTR_8g103930 | 60.686 | 641 | 206 | 7 | 4 | 631 | 6 | 613 | 0.0 | 767 |
| MsG0780036953.01.T01 | MTR_7g011590 | 62.500 | 632 | 205 | 6 | 1 | 630 | 1 | 602 | 0.0 | 766 |
| MsG0780036953.01.T01 | MTR_7g078210 | 62.285 | 639 | 218 | 7 | 1 | 634 | 1 | 621 | 0.0 | 765 |
| MsG0780036953.01.T01 | MTR_6g033955 | 60.842 | 641 | 230 | 3 | 1 | 636 | 1 | 625 | 0.0 | 765 |
| MsG0780036953.01.T01 | MTR_2g437440 | 61.611 | 633 | 206 | 5 | 1 | 630 | 1 | 599 | 0.0 | 765 |
| MsG0780036953.01.T01 | MTR_7g026170 | 61.830 | 634 | 220 | 7 | 1 | 630 | 1 | 616 | 0.0 | 764 |
| MsG0780036953.01.T01 | MTR_2g038270 | 60.754 | 637 | 231 | 9 | 1 | 630 | 1 | 625 | 0.0 | 761 |
| MsG0780036953.01.T01 | MTR_6g033820 | 59.784 | 649 | 240 | 3 | 1 | 644 | 1 | 633 | 0.0 | 761 |
| MsG0780036953.01.T01 | MTR_7g026130 | 61.635 | 636 | 217 | 8 | 1 | 628 | 1 | 617 | 0.0 | 739 |
| MsG0780036953.01.T01 | MTR_7g074460 | 61.295 | 633 | 208 | 5 | 1 | 631 | 1 | 598 | 0.0 | 738 |
| MsG0780036953.01.T01 | MTR_4g027145 | 59.624 | 639 | 238 | 8 | 1 | 630 | 1 | 628 | 0.0 | 738 |
| MsG0780036953.01.T01 | MTR_2g032580 | 60.726 | 634 | 197 | 7 | 1 | 630 | 1 | 586 | 0.0 | 731 |
| MsG0780036953.01.T01 | MTR_7g026140 | 58.991 | 634 | 220 | 9 | 1 | 629 | 1 | 599 | 0.0 | 723 |
| MsG0780036953.01.T01 | MTR_7g025260 | 61.092 | 586 | 213 | 3 | 49 | 634 | 21 | 591 | 0.0 | 719 |
| MsG0780036953.01.T01 | MTR_1g017130 | 57.987 | 626 | 203 | 8 | 1 | 623 | 1 | 569 | 0.0 | 706 |
| MsG0780036953.01.T01 | MTR_6g033800 | 65.209 | 526 | 180 | 2 | 105 | 630 | 1 | 523 | 0.0 | 696 |
| MsG0780036953.01.T01 | MTR_7g451360 | 57.547 | 636 | 190 | 8 | 1 | 632 | 1 | 560 | 0.0 | 689 |
| MsG0780036953.01.T01 | MTR_2g040370 | 83.791 | 401 | 48 | 2 | 4 | 404 | 1024 | 1407 | 0.0 | 679 |
| MsG0780036953.01.T01 | MTR_2g040370 | 82.045 | 401 | 54 | 3 | 4 | 403 | 1408 | 1791 | 0.0 | 644 |
| MsG0780036953.01.T01 | MTR_2g040260 | 80.000 | 415 | 66 | 2 | 1 | 415 | 1030 | 1427 | 0.0 | 679 |
| MsG0780036953.01.T01 | MTR_2g040370 | 83.791 | 401 | 48 | 2 | 4 | 404 | 1024 | 1407 | 0.0 | 679 |
| MsG0780036953.01.T01 | MTR_2g040370 | 82.000 | 400 | 54 | 3 | 4 | 402 | 1408 | 1790 | 0.0 | 642 |
| MsG0780036953.01.T01 | MTR_2g040160 | 80.244 | 410 | 64 | 2 | 6 | 415 | 1106 | 1498 | 0.0 | 666 |
| MsG0780036953.01.T01 | MTR_7g007000 | 55.363 | 634 | 217 | 8 | 1 | 629 | 1 | 573 | 0.0 | 665 |
| MsG0780036953.01.T01 | MTR_4g063720 | 90.411 | 365 | 29 | 3 | 302 | 663 | 217 | 578 | 0.0 | 653 |
| MsG0780036953.01.T01 | MTR_4g063720 | 85.774 | 239 | 19 | 1 | 1 | 239 | 1 | 224 | 7.00e-139 | 418 |
| MsG0780036953.01.T01 | MTR_7g035155 | 54.818 | 633 | 212 | 8 | 1 | 630 | 1 | 562 | 0.0 | 651 |
| MsG0780036953.01.T01 | MTR_2g040220 | 70.789 | 469 | 104 | 5 | 1 | 451 | 1010 | 1463 | 0.0 | 640 |
| MsG0780036953.01.T01 | MTR_2g040220 | 56.872 | 211 | 34 | 4 | 461 | 663 | 1397 | 1558 | 2.10e-55 | 205 |
| MsG0780036953.01.T01 | MTR_1g041565 | 54.372 | 629 | 195 | 10 | 6 | 630 | 2 | 542 | 0.0 | 638 |
| MsG0780036953.01.T01 | MTR_2g040350 | 76.570 | 414 | 76 | 4 | 6 | 415 | 1035 | 1431 | 0.0 | 633 |
| MsG0780036953.01.T01 | MTR_2g040350 | 76.570 | 414 | 76 | 4 | 6 | 415 | 817 | 1213 | 0.0 | 633 |
| MsG0780036953.01.T01 | MTR_2g032160 | 70.513 | 390 | 98 | 2 | 1 | 388 | 1 | 375 | 0.0 | 571 |
| MsG0780036953.01.T01 | MTR_2g032160 | 42.424 | 99 | 56 | 1 | 534 | 631 | 365 | 463 | 2.99e-12 | 69.7 |
| MsG0780036953.01.T01 | MTR_2g010020 | 50.927 | 593 | 249 | 11 | 10 | 595 | 58 | 615 | 0.0 | 557 |
| MsG0780036953.01.T01 | MTR_2g010020 | 50.927 | 593 | 249 | 11 | 10 | 595 | 57 | 614 | 0.0 | 556 |
| MsG0780036953.01.T01 | MTR_4g092920 | 50.422 | 593 | 253 | 10 | 10 | 593 | 54 | 614 | 0.0 | 548 |
| MsG0780036953.01.T01 | MTR_2g005690 | 46.708 | 653 | 295 | 13 | 10 | 652 | 72 | 681 | 1.54e-178 | 525 |
| MsG0780036953.01.T01 | MTR_6g034005 | 49.360 | 547 | 254 | 8 | 95 | 630 | 2 | 536 | 4.07e-166 | 493 |
| MsG0780036953.01.T01 | MTR_4g092920 | 51.710 | 497 | 215 | 8 | 105 | 593 | 1 | 480 | 2.10e-163 | 480 |
| MsG0780036953.01.T01 | MTR_1g077230 | 71.044 | 297 | 69 | 2 | 1 | 295 | 1 | 282 | 3.98e-148 | 431 |
| MsG0780036953.01.T01 | MTR_4g088515 | 54.176 | 443 | 100 | 8 | 9 | 449 | 276 | 617 | 1.19e-141 | 427 |
| MsG0780036953.01.T01 | MTR_6g033810 | 59.337 | 332 | 85 | 3 | 101 | 430 | 8 | 291 | 9.73e-126 | 374 |
| MsG0780036953.01.T01 | MTR_7g026050 | 51.872 | 374 | 151 | 3 | 258 | 630 | 1 | 346 | 3.88e-125 | 375 |
| MsG0780036953.01.T01 | MTR_6g033855 | 52.493 | 381 | 93 | 5 | 101 | 479 | 8 | 302 | 1.30e-119 | 359 |
| MsG0780036953.01.T01 | MTR_7g026080 | 67.308 | 260 | 68 | 2 | 1 | 258 | 1 | 245 | 2.39e-118 | 354 |
| MsG0780036953.01.T01 | MTR_2g040355 | 47.289 | 461 | 82 | 10 | 202 | 661 | 2 | 302 | 3.32e-109 | 332 |
| MsG0780036953.01.T01 | MTR_2g031670 | 65.417 | 240 | 66 | 2 | 21 | 258 | 43 | 267 | 3.62e-104 | 320 |
| MsG0780036953.01.T01 | MTR_2g031670 | 74.627 | 67 | 16 | 1 | 357 | 423 | 275 | 340 | 2.85e-21 | 96.3 |
| MsG0780036953.01.T01 | MTR_1g077240 | 54.209 | 297 | 126 | 4 | 335 | 630 | 1 | 288 | 3.89e-87 | 274 |
| MsG0780036953.01.T01 | MTR_5g006180 | 34.363 | 518 | 284 | 12 | 9 | 509 | 29 | 507 | 1.12e-84 | 277 |
| MsG0780036953.01.T01 | MTR_1207s0010 | 71.591 | 176 | 49 | 1 | 121 | 296 | 1 | 175 | 2.42e-81 | 255 |
| MsG0780036953.01.T01 | MTR_2g102180 | 33.775 | 453 | 269 | 5 | 10 | 449 | 4 | 438 | 3.11e-81 | 275 |
| MsG0780036953.01.T01 | MTR_4g012050 | 33.775 | 453 | 269 | 5 | 10 | 449 | 4 | 438 | 6.98e-80 | 271 |
| MsG0780036953.01.T01 | MTR_5g097190 | 51.493 | 268 | 66 | 4 | 4 | 269 | 153 | 358 | 4.15e-77 | 251 |
| MsG0780036953.01.T01 | MTR_6g478100 | 56.828 | 227 | 69 | 3 | 36 | 262 | 10 | 207 | 8.86e-75 | 243 |
| MsG0780036953.01.T01 | MTR_6g478100 | 40.000 | 95 | 56 | 1 | 530 | 623 | 208 | 302 | 4.60e-12 | 68.2 |
| MsG0780036953.01.T01 | MTR_5g092570 | 33.710 | 442 | 269 | 5 | 10 | 445 | 4 | 427 | 2.46e-73 | 252 |
| MsG0780036953.01.T01 | MTR_3g051300 | 32.414 | 435 | 274 | 5 | 10 | 443 | 4 | 419 | 1.63e-72 | 249 |
| MsG0780036953.01.T01 | MTR_5g090110 | 33.071 | 508 | 272 | 14 | 9 | 497 | 28 | 486 | 2.84e-70 | 238 |
| MsG0780036953.01.T01 | MTR_5g005870 | 41.975 | 324 | 176 | 5 | 280 | 600 | 35 | 349 | 2.47e-68 | 229 |
| MsG0780036953.01.T01 | MTR_4g115780 | 34.556 | 518 | 310 | 12 | 9 | 511 | 140 | 643 | 1.90e-67 | 234 |
| MsG0780036953.01.T01 | MTR_4g107920 | 31.589 | 516 | 309 | 14 | 10 | 511 | 21 | 506 | 1.49e-65 | 226 |
| MsG0780036953.01.T01 | MTR_6g033910 | 46.983 | 232 | 60 | 4 | 86 | 315 | 18 | 188 | 2.98e-55 | 187 |
| MsG0780036953.01.T01 | MTR_3g081170 | 27.542 | 541 | 332 | 15 | 10 | 513 | 27 | 544 | 5.36e-55 | 202 |
| MsG0780036953.01.T01 | MTR_7g074540 | 48.756 | 201 | 102 | 1 | 431 | 631 | 1 | 200 | 6.84e-54 | 183 |
| MsG0780036953.01.T01 | MTR_1g116250 | 44.000 | 275 | 111 | 5 | 357 | 630 | 56 | 288 | 7.27e-54 | 186 |
| MsG0780036953.01.T01 | MTR_7g026180 | 70.769 | 130 | 37 | 1 | 79 | 207 | 10 | 139 | 3.54e-53 | 186 |
| MsG0780036953.01.T01 | MTR_7g026180 | 35.023 | 217 | 108 | 4 | 416 | 630 | 144 | 329 | 1.89e-27 | 114 |
| MsG0780036953.01.T01 | MTR_2g017710 | 43.077 | 260 | 63 | 6 | 238 | 495 | 17 | 193 | 8.18e-48 | 169 |
| MsG0780036953.01.T01 | MTR_7g451390 | 48.634 | 183 | 92 | 2 | 451 | 632 | 10 | 191 | 2.19e-47 | 166 |
| MsG0780036953.01.T01 | MTR_5g005890 | 38.326 | 227 | 89 | 4 | 87 | 312 | 5 | 181 | 1.89e-42 | 152 |
| MsG0780036953.01.T01 | MTR_1g068900 | 51.316 | 152 | 66 | 4 | 441 | 588 | 23 | 170 | 4.93e-38 | 139 |
| MsG0780036953.01.T01 | MTR_6g033805 | 77.465 | 71 | 16 | 0 | 1 | 71 | 1 | 71 | 9.13e-33 | 121 |
| MsG0780036953.01.T01 | MTR_4g027235 | 72.973 | 74 | 18 | 1 | 1 | 72 | 1 | 74 | 2.07e-29 | 111 |
| MsG0780036953.01.T01 | MTR_4g027085 | 72.973 | 74 | 18 | 1 | 1 | 72 | 1 | 74 | 2.07e-29 | 111 |
| MsG0780036953.01.T01 | MTR_7g026190 | 57.447 | 94 | 31 | 2 | 301 | 394 | 9 | 93 | 9.56e-28 | 111 |
| MsG0780036953.01.T01 | MTR_7g026190 | 39.496 | 119 | 69 | 2 | 513 | 631 | 94 | 209 | 2.02e-15 | 75.9 |
| MsG0780036953.01.T01 | MTR_2g040375 | 76.667 | 60 | 14 | 0 | 413 | 472 | 51 | 110 | 4.73e-23 | 95.1 |
| MsG0780036953.01.T01 | MTR_4g115860 | 46.739 | 92 | 49 | 0 | 411 | 502 | 29 | 120 | 2.17e-22 | 93.6 |
| MsG0780036953.01.T01 | MTR_6g033815 | 54.930 | 71 | 32 | 0 | 539 | 609 | 1 | 71 | 4.28e-20 | 86.3 |
| MsG0780036953.01.T01 | MTR_7g021430 | 52.000 | 75 | 36 | 0 | 228 | 302 | 1 | 75 | 2.01e-18 | 84.3 |
| MsG0780036953.01.T01 | MTR_7g026095 | 45.652 | 92 | 50 | 0 | 497 | 588 | 256 | 347 | 5.95e-18 | 86.3 |
| MsG0780036953.01.T01 | MTR_7g026095 | 50.000 | 88 | 28 | 2 | 101 | 188 | 189 | 260 | 9.82e-17 | 82.8 |
| MsG0780036953.01.T01 | MTR_7g026160 | 37.500 | 120 | 49 | 4 | 311 | 404 | 72 | 191 | 3.23e-12 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036953.01.T01 | AT5G02500 | 89.339 | 666 | 53 | 2 | 1 | 663 | 1 | 651 | 0.0 | 1215 |
| MsG0780036953.01.T01 | AT3G12580 | 90.991 | 666 | 41 | 4 | 1 | 663 | 1 | 650 | 0.0 | 1214 |
| MsG0780036953.01.T01 | AT3G09440 | 89.608 | 664 | 53 | 2 | 1 | 663 | 1 | 649 | 0.0 | 1212 |
| MsG0780036953.01.T01 | AT3G09440 | 89.608 | 664 | 53 | 2 | 1 | 663 | 1 | 649 | 0.0 | 1212 |
| MsG0780036953.01.T01 | AT3G09440 | 89.608 | 664 | 53 | 2 | 1 | 663 | 1 | 649 | 0.0 | 1212 |
| MsG0780036953.01.T01 | AT3G09440 | 89.608 | 664 | 53 | 2 | 1 | 663 | 1 | 649 | 0.0 | 1212 |
| MsG0780036953.01.T01 | AT5G02490 | 87.725 | 668 | 62 | 3 | 1 | 663 | 1 | 653 | 0.0 | 1189 |
| MsG0780036953.01.T01 | AT1G56410 | 85.647 | 634 | 74 | 2 | 1 | 634 | 1 | 617 | 0.0 | 1112 |
| MsG0780036953.01.T01 | AT1G16030 | 81.353 | 665 | 103 | 4 | 1 | 663 | 1 | 646 | 0.0 | 1108 |
| MsG0780036953.01.T01 | AT5G42020 | 63.537 | 639 | 211 | 6 | 7 | 642 | 35 | 654 | 0.0 | 819 |
| MsG0780036953.01.T01 | AT5G42020 | 63.537 | 639 | 211 | 6 | 7 | 642 | 40 | 659 | 0.0 | 819 |
| MsG0780036953.01.T01 | AT5G28540 | 64.070 | 629 | 205 | 5 | 7 | 633 | 35 | 644 | 0.0 | 816 |
| MsG0780036953.01.T01 | AT1G09080 | 60.972 | 638 | 225 | 5 | 1 | 633 | 30 | 648 | 0.0 | 777 |
| MsG0780036953.01.T01 | AT1G09080 | 60.972 | 638 | 225 | 5 | 1 | 633 | 40 | 658 | 0.0 | 776 |
| MsG0780036953.01.T01 | AT5G02500 | 89.976 | 409 | 26 | 1 | 1 | 409 | 1 | 394 | 0.0 | 763 |
| MsG0780036953.01.T01 | AT5G02500 | 77.206 | 136 | 28 | 1 | 531 | 663 | 386 | 521 | 6.85e-57 | 201 |
| MsG0780036953.01.T01 | AT5G42020 | 57.590 | 639 | 194 | 11 | 7 | 642 | 35 | 599 | 0.0 | 691 |
| MsG0780036953.01.T01 | AT5G09590 | 51.597 | 595 | 243 | 11 | 10 | 595 | 60 | 618 | 0.0 | 551 |
| MsG0780036953.01.T01 | AT5G49910 | 47.664 | 642 | 294 | 12 | 10 | 643 | 81 | 688 | 1.23e-180 | 530 |
| MsG0780036953.01.T01 | AT4G24280 | 48.172 | 629 | 285 | 12 | 10 | 632 | 81 | 674 | 1.48e-180 | 530 |
| MsG0780036953.01.T01 | AT4G37910 | 50.422 | 593 | 253 | 10 | 10 | 593 | 55 | 615 | 1.99e-177 | 521 |
| MsG0780036953.01.T01 | AT4G37910 | 50.422 | 593 | 253 | 10 | 10 | 593 | 55 | 615 | 1.99e-177 | 521 |
| MsG0780036953.01.T01 | AT1G79930 | 28.877 | 748 | 416 | 15 | 10 | 663 | 4 | 729 | 9.68e-88 | 292 |
| MsG0780036953.01.T01 | AT2G32120 | 34.417 | 523 | 308 | 10 | 9 | 523 | 30 | 525 | 6.65e-87 | 283 |
| MsG0780036953.01.T01 | AT2G32120 | 34.417 | 523 | 308 | 10 | 9 | 523 | 30 | 525 | 6.65e-87 | 283 |
| MsG0780036953.01.T01 | AT1G79930 | 28.476 | 748 | 419 | 16 | 10 | 663 | 4 | 729 | 1.10e-85 | 285 |
| MsG0780036953.01.T01 | AT1G79920 | 34.658 | 453 | 265 | 5 | 10 | 449 | 4 | 438 | 1.18e-83 | 279 |
| MsG0780036953.01.T01 | AT1G79920 | 34.658 | 453 | 265 | 5 | 10 | 449 | 4 | 438 | 2.21e-83 | 278 |
| MsG0780036953.01.T01 | AT1G79920 | 34.658 | 453 | 265 | 5 | 10 | 449 | 4 | 438 | 2.21e-83 | 278 |
| MsG0780036953.01.T01 | AT1G79920 | 34.658 | 453 | 265 | 5 | 10 | 449 | 4 | 438 | 2.21e-83 | 278 |
| MsG0780036953.01.T01 | AT1G11660 | 26.522 | 690 | 405 | 12 | 10 | 634 | 4 | 656 | 6.18e-80 | 270 |
| MsG0780036953.01.T01 | AT1G11660 | 26.522 | 690 | 405 | 12 | 10 | 634 | 4 | 656 | 6.18e-80 | 270 |
| MsG0780036953.01.T01 | AT1G11660 | 26.522 | 690 | 405 | 12 | 10 | 634 | 4 | 656 | 6.18e-80 | 270 |
| MsG0780036953.01.T01 | AT1G11660 | 26.565 | 655 | 379 | 12 | 45 | 634 | 2 | 619 | 9.29e-72 | 246 |
| MsG0780036953.01.T01 | AT4G16660 | 25.034 | 731 | 423 | 17 | 3 | 627 | 44 | 755 | 5.40e-60 | 216 |
| MsG0780036953.01.T01 | AT4G16660 | 25.308 | 731 | 421 | 18 | 3 | 627 | 20 | 731 | 1.66e-58 | 212 |
Find 158 sgRNAs with CRISPR-Local
Find 197 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGGGAAAATTCGAGCTTTC+CGG | 0.198288 | 7:+17068502 | MsG0780036953.01.T01:CDS |
| GGTTCAAGATTTGTTGCTTT+TGG | 0.218491 | 7:+17068297 | MsG0780036953.01.T01:CDS |
| TAATCGACTTCTTCAATCTT+AGG | 0.232445 | 7:-17069042 | None:intergenic |
| TTGTTTGCTCATTGGTTATT+TGG | 0.247151 | 7:+17067292 | MsG0780036953.01.T01:CDS |
| GAGAGAAAAGTGTTTGTGTT+AGG | 0.262410 | 7:-17066353 | None:intergenic |
| TCTTAAACTCTTGAACAAAA+TGG | 0.275265 | 7:-17067853 | None:intergenic |
| AGAGAAAACTTGCTCCTTCT+TGG | 0.282443 | 7:-17068401 | None:intergenic |
| GTTCATGATGTTGTTCTTGT+TGG | 0.297305 | 7:+17068127 | MsG0780036953.01.T01:CDS |
| TTACCGAAAACGGTGTTAAC+AGG | 0.308664 | 7:-17066623 | None:intergenic |
| CGTTCGGTTTCCTTGATCAT+TGG | 0.309046 | 7:-17066525 | None:intergenic |
| CGTATTCGTGTGTTGGAGTA+TGG | 0.309119 | 7:+17066477 | MsG0780036953.01.T01:CDS |
| CAAAGTTCAGCAACTGTTGC+AGG | 0.317428 | 7:+17068168 | MsG0780036953.01.T01:CDS |
| TGCTGAAGAAATTTCATCTA+TGG | 0.318039 | 7:+17067475 | MsG0780036953.01.T01:CDS |
| GGACCAGCAGTAACCTTAAA+AGG | 0.319176 | 7:-17067398 | None:intergenic |
| CGATCAACAATGGCCGTAAA+AGG | 0.321693 | 7:+17066419 | MsG0780036953.01.T01:exon |
| TGCAACAGTTGCTGAACTTT+GGG | 0.329904 | 7:-17068166 | None:intergenic |
| TGATACATCTTAGCAATGAT+TGG | 0.339938 | 7:-17068949 | None:intergenic |
| TCCCAACAAGTTGTTGTCTC+TGG | 0.342182 | 7:-17068485 | None:intergenic |
| CTCTCTCACCTTCATAAACT+TGG | 0.342869 | 7:-17068456 | None:intergenic |
| CTGCAACAGTTGCTGAACTT+TGG | 0.347466 | 7:-17068167 | None:intergenic |
| GATGTCACTCCATTGTCTCT+TGG | 0.351591 | 7:+17068319 | MsG0780036953.01.T01:CDS |
| CTCCTTCTTGGTTGGAATTG+TGG | 0.361148 | 7:-17068389 | None:intergenic |
| CCATATGCAACAGCCTCGTC+TGG | 0.361349 | 7:-17068229 | None:intergenic |
| AAGGATGCCGGTGTTATTGC+TGG | 0.363539 | 7:+17067605 | MsG0780036953.01.T01:CDS |
| AGAGAAAAGTGTTTGTGTTA+GGG | 0.377274 | 7:-17066352 | None:intergenic |
| AACTTAACATGGATCTGTTC+AGG | 0.378060 | 7:+17068047 | MsG0780036953.01.T01:CDS |
| ACAGATGCTAAACGTTTGAT+TGG | 0.381796 | 7:+17067329 | MsG0780036953.01.T01:CDS |
| TTAGAAGTTTGTTTGCTCAT+TGG | 0.391682 | 7:+17067284 | MsG0780036953.01.T01:intron |
| CCTCCAGCAGCAGGTGGTGC+TGG | 0.395029 | 7:+17069018 | MsG0780036953.01.T01:CDS |
| TGCGTATGGTCTTGACAAAA+AGG | 0.402154 | 7:+17067673 | MsG0780036953.01.T01:CDS |
| TCCATACCACCAGCCATATC+AGG | 0.402194 | 7:-17068985 | None:intergenic |
| GAATCGTGAGAATTGTTGTT+AGG | 0.402754 | 7:-17066293 | None:intergenic |
| GTTGGAATTGTGGTGTTCCT+TGG | 0.407304 | 7:-17068379 | None:intergenic |
| GGTTGATGCAAAGAATGCTT+TGG | 0.410300 | 7:+17068741 | MsG0780036953.01.T01:CDS |
| TGAGATTGATTCTTTGTTTG+AGG | 0.412145 | 7:+17067982 | MsG0780036953.01.T01:CDS |
| TCCTGCGATTGGAATAGATC+TGG | 0.413134 | 7:+17066448 | MsG0780036953.01.T01:CDS |
| AGGTGGAGGTGCTCCTGATA+TGG | 0.414427 | 7:+17068972 | MsG0780036953.01.T01:CDS |
| CGACAAAGGAAGGTTGTCTA+AGG | 0.418046 | 7:+17068651 | MsG0780036953.01.T01:CDS |
| TCTGCTGAGGACAAAACAAC+TGG | 0.419349 | 7:+17068601 | MsG0780036953.01.T01:CDS |
| GATTCAAGAACGCTAGGGTT+TGG | 0.421047 | 7:-17066397 | None:intergenic |
| TCCTGATATGGCTGGTGGTA+TGG | 0.425793 | 7:+17068984 | MsG0780036953.01.T01:CDS |
| CTTGTAGTTAACACCAATCA+TGG | 0.433031 | 7:-17067432 | None:intergenic |
| CATGATGTTGTTCTTGTTGG+TGG | 0.435475 | 7:+17068130 | MsG0780036953.01.T01:CDS |
| GAGATTGCCGAAGCTTATCT+TGG | 0.435979 | 7:+17067515 | MsG0780036953.01.T01:CDS |
| TCTCTCAAACACTTCTCAAC+AGG | 0.442304 | 7:-17068082 | None:intergenic |
| TTTAAGGTTACTGCTGGTCC+TGG | 0.442913 | 7:+17067401 | MsG0780036953.01.T01:CDS |
| AATAACACCGGCATCCTTTG+TGG | 0.457869 | 7:-17067600 | None:intergenic |
| AAAACTTGCTCCTTCTTGGT+TGG | 0.457926 | 7:-17068397 | None:intergenic |
| CTCAATCTCCGAAGTGCTCT+AGG | 0.460918 | 7:-17067905 | None:intergenic |
| ACGATTAAAGACGAGAAGAT+TGG | 0.464209 | 7:+17068790 | MsG0780036953.01.T01:CDS |
| TAAGGAAGAAATTGAGAAGA+TGG | 0.466344 | 7:+17068669 | MsG0780036953.01.T01:CDS |
| CCAGACGAGGCTGTTGCATA+TGG | 0.468251 | 7:+17068229 | MsG0780036953.01.T01:CDS |
| AACCAGAGACAACAACTTGT+TGG | 0.470053 | 7:+17068483 | MsG0780036953.01.T01:CDS |
| ACTCATCAGCCTCTGCCAAC+TGG | 0.471841 | 7:-17068888 | None:intergenic |
| CGGTGATGCTGCTAAGAATC+AGG | 0.474840 | 7:+17066589 | MsG0780036953.01.T01:CDS |
| GGACCAGCACCACCTGCTGC+TGG | 0.476038 | 7:-17069021 | None:intergenic |
| CAAAATCTTCGCCACCAAGA+TGG | 0.476601 | 7:-17067814 | None:intergenic |
| GTGTTTGAGAGATGCTAAGA+TGG | 0.478571 | 7:+17068093 | MsG0780036953.01.T01:CDS |
| ACTGCTGGTGATACCCATCT+TGG | 0.479477 | 7:+17067800 | MsG0780036953.01.T01:CDS |
| GAGATTGATTCTTTGTTTGA+GGG | 0.481259 | 7:+17067983 | MsG0780036953.01.T01:CDS |
| AGCTGAACCAAGATAAGCTT+CGG | 0.483247 | 7:-17067522 | None:intergenic |
| AAGAACAAGAAGGATATTAG+TGG | 0.486274 | 7:+17067878 | MsG0780036953.01.T01:CDS |
| TTGCTGGTTTGAATGTTATG+AGG | 0.486524 | 7:+17067621 | MsG0780036953.01.T01:CDS |
| ACCAGAGACAACAACTTGTT+GGG | 0.487350 | 7:+17068484 | MsG0780036953.01.T01:CDS |
| CTGTTGCAGGACTTCTTCAA+TGG | 0.487768 | 7:+17068181 | MsG0780036953.01.T01:CDS |
| GAGATCATCGCCAATGATCA+AGG | 0.487997 | 7:+17066515 | MsG0780036953.01.T01:CDS |
| CAACGTAAGACGGCGTCGTT+CGG | 0.492610 | 7:-17066541 | None:intergenic |
| CCTTCCTTTGTCGTTGGTGA+TGG | 0.494022 | 7:-17068641 | None:intergenic |
| AAAATCTTCGCCACCAAGAT+GGG | 0.495980 | 7:-17067813 | None:intergenic |
| GGATCTGTTCAGGAAGTGTA+TGG | 0.496195 | 7:+17068057 | MsG0780036953.01.T01:CDS |
| TTTGAAGTTAAGGCCACTGC+TGG | 0.497920 | 7:+17067785 | MsG0780036953.01.T01:CDS |
| GGAGGTGCTCCTGATATGGC+TGG | 0.498862 | 7:+17068976 | MsG0780036953.01.T01:CDS |
| ACGGGGAGCTGGAGGAATGC+CGG | 0.501984 | 7:-17068521 | None:intergenic |
| TGAGGAACACCACGGGGAGC+TGG | 0.503287 | 7:-17068532 | None:intergenic |
| AGAAATTGAGAAGATGGTTG+AGG | 0.504892 | 7:+17068675 | MsG0780036953.01.T01:CDS |
| AATCACCCGTGCTAGGTTTG+AGG | 0.506158 | 7:+17068024 | MsG0780036953.01.T01:CDS |
| AAAGGAGAAGGTCCTGCGAT+TGG | 0.507290 | 7:+17066437 | MsG0780036953.01.T01:CDS |
| TGACGCTGCAATTCAGTGGT+TGG | 0.507402 | 7:+17068858 | MsG0780036953.01.T01:CDS |
| ATCATTGCTAAGATGTATCA+AGG | 0.508198 | 7:+17068952 | MsG0780036953.01.T01:CDS |
| ATGCTAAACGTTTGATTGGA+AGG | 0.508528 | 7:+17067333 | MsG0780036953.01.T01:CDS |
| TCGAAGCAAACTGTGATTTG+AGG | 0.510318 | 7:-17068550 | None:intergenic |
| AATCGAAATCTTACCGAAAA+CGG | 0.511172 | 7:-17066633 | None:intergenic |
| GCAGGACTTCTTCAATGGTA+AGG | 0.512874 | 7:+17068186 | MsG0780036953.01.T01:CDS |
| GATGAAGTTCCTCCAGCAGC+AGG | 0.518012 | 7:+17069009 | MsG0780036953.01.T01:CDS |
| TTGATCGATTCAAGAACGCT+AGG | 0.523781 | 7:-17066403 | None:intergenic |
| AAACAAAGAATCAATCTCAA+TGG | 0.529138 | 7:-17067978 | None:intergenic |
| CATGATTGGTGTTAACTACA+AGG | 0.531338 | 7:+17067433 | MsG0780036953.01.T01:CDS |
| TGCTTCGACATTGATGCCAA+TGG | 0.532548 | 7:+17068565 | MsG0780036953.01.T01:CDS |
| CCCAGATCTATTCCAATCGC+AGG | 0.533456 | 7:-17066449 | None:intergenic |
| GAGTGGTGAAGGAAATGAGA+AGG | 0.541225 | 7:+17068276 | MsG0780036953.01.T01:CDS |
| TGAGTTTGAAGATAAGATGA+AGG | 0.542099 | 7:+17068906 | MsG0780036953.01.T01:CDS |
| CGTCAAGCCACAAAGGATGC+CGG | 0.544853 | 7:+17067593 | MsG0780036953.01.T01:CDS |
| ACACCACAATCACCCGTGCT+AGG | 0.544924 | 7:+17068017 | MsG0780036953.01.T01:CDS |
| AGACAACCTTCCTTTGTCGT+TGG | 0.545078 | 7:-17068647 | None:intergenic |
| CCTGGTGAAAAGCCCATGAT+TGG | 0.545365 | 7:+17067419 | MsG0780036953.01.T01:CDS |
| ACTGATAGTGAACGATTGAT+CGG | 0.545823 | 7:+17066569 | MsG0780036953.01.T01:CDS |
| TCTCTTGGTCTAGAAACTGC+TGG | 0.546967 | 7:+17068334 | MsG0780036953.01.T01:CDS |
| AATCGTGAGAATTGTTGTTA+GGG | 0.549918 | 7:-17066292 | None:intergenic |
| CCTGCGATTGGAATAGATCT+GGG | 0.553696 | 7:+17066449 | MsG0780036953.01.T01:CDS |
| TCATGACTGTATTGATTCCA+AGG | 0.554072 | 7:+17068362 | MsG0780036953.01.T01:CDS |
| AAACCTAGCACGGGTGATTG+TGG | 0.557012 | 7:-17068020 | None:intergenic |
| TGAGAGTCGTTGAAGTAAGC+TGG | 0.557282 | 7:-17067569 | None:intergenic |
| GAAATACAAGGCTGAAGATG+AGG | 0.560874 | 7:+17068705 | MsG0780036953.01.T01:CDS |
| GCTGGTGATACCCATCTTGG+TGG | 0.562989 | 7:+17067803 | MsG0780036953.01.T01:CDS |
| GTCTCTTCTTACTATTGAAG+AGG | 0.563002 | 7:+17067757 | MsG0780036953.01.T01:CDS |
| TCAGTAAAAGCAACGTAAGA+CGG | 0.567446 | 7:-17066551 | None:intergenic |
| GTTTAAGAGGAAGAACAAGA+AGG | 0.567567 | 7:+17067868 | MsG0780036953.01.T01:CDS |
| ACTGCAGCAGCTATTGCGTA+TGG | 0.568324 | 7:+17067659 | MsG0780036953.01.T01:CDS |
| GTTTCTAGACCAAGAGACAA+TGG | 0.570014 | 7:-17068328 | None:intergenic |
| GGAACAACGTATTCGTGTGT+TGG | 0.576773 | 7:+17066470 | MsG0780036953.01.T01:CDS |
| TCAATCTCCGAAGTGCTCTA+GGG | 0.579128 | 7:-17067904 | None:intergenic |
| GGACAGTAACCAGTTGGCAG+AGG | 0.580101 | 7:+17068879 | MsG0780036953.01.T01:CDS |
| TAGCAATGATTGGATTGCAA+AGG | 0.581264 | 7:-17068939 | None:intergenic |
| CACCACAATTCCAACCAAGA+AGG | 0.583129 | 7:+17068387 | MsG0780036953.01.T01:CDS |
| TAAGTTCCTCAAACCTAGCA+CGG | 0.587266 | 7:-17068030 | None:intergenic |
| TGATCGATTCAAGAACGCTA+GGG | 0.588402 | 7:-17066402 | None:intergenic |
| TCTCTTCTTACTATTGAAGA+GGG | 0.590747 | 7:+17067758 | MsG0780036953.01.T01:CDS |
| CATATGCAACAGCCTCGTCT+GGG | 0.593425 | 7:-17068228 | None:intergenic |
| CCAGCACCACCTGCTGCTGG+AGG | 0.596593 | 7:-17069018 | None:intergenic |
| GTGTTGATCCAAGTTTATGA+AGG | 0.601048 | 7:+17068448 | MsG0780036953.01.T01:CDS |
| AGAGACATTCAAGATACCAT+TGG | 0.601087 | 7:-17068581 | None:intergenic |
| CCATCACCAACGACAAAGGA+AGG | 0.602128 | 7:+17068641 | MsG0780036953.01.T01:CDS |
| GCTAAGATGTATCAAGGTGG+AGG | 0.602520 | 7:+17068958 | MsG0780036953.01.T01:CDS |
| CTCTCAGCGTCAAGCCACAA+AGG | 0.604101 | 7:+17067586 | MsG0780036953.01.T01:CDS |
| CAAAATCGCTGCTTGTACAG+CGG | 0.607717 | 7:-17068254 | None:intergenic |
| GTGGTTGGACAGTAACCAGT+TGG | 0.608307 | 7:+17068873 | MsG0780036953.01.T01:CDS |
| AAGTTCCTCAAACCTAGCAC+GGG | 0.609404 | 7:-17068029 | None:intergenic |
| TTGTAGTTAACACCAATCAT+GGG | 0.609538 | 7:-17067431 | None:intergenic |
| TGTGATTTGAGGAACACCAC+GGG | 0.611264 | 7:-17068539 | None:intergenic |
| TACCGAAAACGGTGTTAACA+GGG | 0.612530 | 7:-17066622 | None:intergenic |
| ATTACCATCACCAACGACAA+AGG | 0.613058 | 7:+17068637 | MsG0780036953.01.T01:CDS |
| ACAATGGCCGTAAAAGGAGA+AGG | 0.621518 | 7:+17066425 | MsG0780036953.01.T01:exon |
| TTCAGAGTGACATGAAGTTG+TGG | 0.623777 | 7:+17067375 | MsG0780036953.01.T01:CDS |
| AAAACTACGCTTACAACATG+AGG | 0.626171 | 7:+17068764 | MsG0780036953.01.T01:CDS |
| TAGGTTTGAGGAACTTAACA+TGG | 0.627754 | 7:+17068036 | MsG0780036953.01.T01:CDS |
| GGAACACCACGGGGAGCTGG+AGG | 0.631612 | 7:-17068529 | None:intergenic |
| TGGTGTTAACTACAAGGGTG+AGG | 0.634934 | 7:+17067439 | MsG0780036953.01.T01:CDS |
| CTGCTGAGGACAAAACAACT+GGG | 0.640141 | 7:+17068602 | MsG0780036953.01.T01:CDS |
| GTGGTAACCCTAGAGCACTT+CGG | 0.640725 | 7:+17067897 | MsG0780036953.01.T01:CDS |
| GGTGCTCCTGATATGGCTGG+TGG | 0.645251 | 7:+17068979 | MsG0780036953.01.T01:CDS |
| TAAACTTGGATCAACACACC+TGG | 0.648087 | 7:-17068442 | None:intergenic |
| CAAGAGTATCAACCCAGACG+AGG | 0.648278 | 7:+17068216 | MsG0780036953.01.T01:CDS |
| GAAGTTCCTCCAGCAGCAGG+TGG | 0.652201 | 7:+17069012 | MsG0780036953.01.T01:CDS |
| GTTCTTGAATCGATCAACAA+TGG | 0.656822 | 7:+17066409 | MsG0780036953.01.T01:exon |
| CAATTGACGCTGCAATTCAG+TGG | 0.657113 | 7:+17068854 | MsG0780036953.01.T01:CDS |
| ACATACTCAGACAATCAACC+AGG | 0.659466 | 7:+17068424 | MsG0780036953.01.T01:CDS |
| AAGATGGGTATCACCAGCAG+TGG | 0.661313 | 7:-17067798 | None:intergenic |
| ATGATTGGTGTTAACTACAA+GGG | 0.664773 | 7:+17067434 | MsG0780036953.01.T01:CDS |
| TGAGGAAGCAGAGAAATACA+AGG | 0.667993 | 7:+17068693 | MsG0780036953.01.T01:CDS |
| CTGTGATTTGAGGAACACCA+CGG | 0.668774 | 7:-17068540 | None:intergenic |
| CTTGGTCTAGAAACTGCTGG+TGG | 0.672600 | 7:+17068337 | MsG0780036953.01.T01:CDS |
| TACGCAATAGCTGCTGCAGT+AGG | 0.675334 | 7:-17067656 | None:intergenic |
| ATTCAAACCAGCAATAACAC+CGG | 0.680140 | 7:-17067612 | None:intergenic |
| GGCATTCCTCCAGCTCCCCG+TGG | 0.680342 | 7:+17068523 | MsG0780036953.01.T01:CDS |
| TATCTTGAATGTCTCTGCTG+AGG | 0.697510 | 7:+17068588 | MsG0780036953.01.T01:CDS |
| TGAAGTTGTTGTGAATCGTG+AGG | 0.701587 | 7:-17066326 | None:intergenic |
| ATTGCTAAGATGTATCAAGG+TGG | 0.733799 | 7:+17068955 | MsG0780036953.01.T01:CDS |
| GTGATTTGAGGAACACCACG+GGG | 0.760451 | 7:-17068538 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAAAATAAATAATTAATCTA+GGG | + | Chr7:17066773-17066792 | MsG0780036953.01.T01:intron | 10.0% |
| !! | TGAAAATAAATAATTAATCT+AGG | + | Chr7:17066772-17066791 | MsG0780036953.01.T01:intron | 10.0% |
| !! | TTTATAATGATAGAACATTA+TGG | + | Chr7:17067080-17067099 | MsG0780036953.01.T01:intron | 15.0% |
| !!! | AATGTGTTGATTTTTGATTT+GGG | + | Chr7:17067716-17067735 | MsG0780036953.01.T01:CDS | 20.0% |
| !!! | ACTTTTATTCTTATTGAATG+AGG | + | Chr7:17066963-17066982 | MsG0780036953.01.T01:intron | 20.0% |
| !!! | ATTTGTTTGTTTTTTTGAGT+TGG | + | Chr7:17067045-17067064 | MsG0780036953.01.T01:intron | 20.0% |
| ! | AAACAAAGAATCAATCTCAA+TGG | - | Chr7:17067981-17068000 | None:intergenic | 25.0% |
| ! | ATTAGATCCCTTATATTGAA+CGG | + | Chr7:17066995-17067014 | MsG0780036953.01.T01:intron | 25.0% |
| ! | TCTTAAACTCTTGAACAAAA+TGG | - | Chr7:17067856-17067875 | None:intergenic | 25.0% |
| !! | ATTTTGTTCAAGAGTTTAAG+AGG | + | Chr7:17067855-17067874 | MsG0780036953.01.T01:CDS | 25.0% |
| !!! | AATTAATCTAGGGTTTTATC+TGG | + | Chr7:17066783-17066802 | MsG0780036953.01.T01:intron | 25.0% |
| !!! | GAATGTGTTGATTTTTGATT+TGG | + | Chr7:17067715-17067734 | MsG0780036953.01.T01:CDS | 25.0% |
| !!! | TTTGTTTTTTTGAGTTGGAT+TGG | + | Chr7:17067050-17067069 | MsG0780036953.01.T01:intron | 25.0% |
| AAGAACAAGAAGGATATTAG+TGG | + | Chr7:17067878-17067897 | MsG0780036953.01.T01:CDS | 30.0% | |
| AATCGAAATCTTACCGAAAA+CGG | - | Chr7:17066636-17066655 | None:intergenic | 30.0% | |
| ATCATTGCTAAGATGTATCA+AGG | + | Chr7:17068952-17068971 | MsG0780036953.01.T01:CDS | 30.0% | |
| GAATTCACCGTTCAATATAA+GGG | - | Chr7:17067005-17067024 | None:intergenic | 30.0% | |
| TAAGGAAGAAATTGAGAAGA+TGG | + | Chr7:17068669-17068688 | MsG0780036953.01.T01:CDS | 30.0% | |
| TCTCTTCTTACTATTGAAGA+GGG | + | Chr7:17067758-17067777 | MsG0780036953.01.T01:CDS | 30.0% | |
| TGAGTTTGAAGATAAGATGA+AGG | + | Chr7:17068906-17068925 | MsG0780036953.01.T01:CDS | 30.0% | |
| TGATACATCTTAGCAATGAT+TGG | - | Chr7:17068952-17068971 | None:intergenic | 30.0% | |
| TGCTGAAGAAATTTCATCTA+TGG | + | Chr7:17067475-17067494 | MsG0780036953.01.T01:CDS | 30.0% | |
| TTGTAGTTAACACCAATCAT+GGG | - | Chr7:17067434-17067453 | None:intergenic | 30.0% | |
| ! | AATCGTGAGAATTGTTGTTA+GGG | - | Chr7:17066295-17066314 | None:intergenic | 30.0% |
| ! | AATCTTCTTTTTGTCATCAG+GGG | - | Chr7:17068827-17068846 | None:intergenic | 30.0% |
| ! | CAATCTTCTTTTTGTCATCA+GGG | - | Chr7:17068828-17068847 | None:intergenic | 30.0% |
| ! | GAGATTGATTCTTTGTTTGA+GGG | + | Chr7:17067983-17068002 | MsG0780036953.01.T01:CDS | 30.0% |
| ! | TAATCGACTTCTTCAATCTT+AGG | - | Chr7:17069045-17069064 | None:intergenic | 30.0% |
| ! | TCAATCTTCTTTTTGTCATC+AGG | - | Chr7:17068829-17068848 | None:intergenic | 30.0% |
| ! | TGAGATTGATTCTTTGTTTG+AGG | + | Chr7:17067982-17068001 | MsG0780036953.01.T01:CDS | 30.0% |
| ! | TTAGAAGTTTGTTTGCTCAT+TGG | + | Chr7:17067284-17067303 | MsG0780036953.01.T01:intron | 30.0% |
| ! | TTGTTTGCTCATTGGTTATT+TGG | + | Chr7:17067292-17067311 | MsG0780036953.01.T01:CDS | 30.0% |
| !! | AGAGAAAAGTGTTTGTGTTA+GGG | - | Chr7:17066355-17066374 | None:intergenic | 30.0% |
| !! | ATGATTGGTGTTAACTACAA+GGG | + | Chr7:17067434-17067453 | MsG0780036953.01.T01:CDS | 30.0% |
| !! | CGAAGATTTTGATAACAGAA+TGG | + | Chr7:17067826-17067845 | MsG0780036953.01.T01:CDS | 30.0% |
| !!! | AGAGGGTATTTTTGAAGTTA+AGG | + | Chr7:17067775-17067794 | MsG0780036953.01.T01:CDS | 30.0% |
| !!! | TTTTGAGTTGGATTGGAATA+TGG | + | Chr7:17067057-17067076 | MsG0780036953.01.T01:intron | 30.0% |
| AAAACTACGCTTACAACATG+AGG | + | Chr7:17068764-17068783 | MsG0780036953.01.T01:CDS | 35.0% | |
| AACTTAACATGGATCTGTTC+AGG | + | Chr7:17068047-17068066 | MsG0780036953.01.T01:CDS | 35.0% | |
| ACAGATGCTAAACGTTTGAT+TGG | + | Chr7:17067329-17067348 | MsG0780036953.01.T01:CDS | 35.0% | |
| ACGATTAAAGACGAGAAGAT+TGG | + | Chr7:17068790-17068809 | MsG0780036953.01.T01:CDS | 35.0% | |
| AGAAATTGAGAAGATGGTTG+AGG | + | Chr7:17068675-17068694 | MsG0780036953.01.T01:CDS | 35.0% | |
| AGAGACATTCAAGATACCAT+TGG | - | Chr7:17068584-17068603 | None:intergenic | 35.0% | |
| AGATGAGGAACACAAAAAGA+AGG | + | Chr7:17068720-17068739 | MsG0780036953.01.T01:CDS | 35.0% | |
| ATGCTAAACGTTTGATTGGA+AGG | + | Chr7:17067333-17067352 | MsG0780036953.01.T01:CDS | 35.0% | |
| ATTCAAACCAGCAATAACAC+CGG | - | Chr7:17067615-17067634 | None:intergenic | 35.0% | |
| ATTGCTAAGATGTATCAAGG+TGG | + | Chr7:17068955-17068974 | MsG0780036953.01.T01:CDS | 35.0% | |
| CGAATTCACCGTTCAATATA+AGG | - | Chr7:17067006-17067025 | None:intergenic | 35.0% | |
| CTTGTAGTTAACACCAATCA+TGG | - | Chr7:17067435-17067454 | None:intergenic | 35.0% | |
| GTCTCTTCTTACTATTGAAG+AGG | + | Chr7:17067757-17067776 | MsG0780036953.01.T01:CDS | 35.0% | |
| GTTCATGATGTTGTTCTTGT+TGG | + | Chr7:17068127-17068146 | MsG0780036953.01.T01:CDS | 35.0% | |
| GTTCTTGAATCGATCAACAA+TGG | + | Chr7:17066409-17066428 | MsG0780036953.01.T01:exon | 35.0% | |
| GTTTAAGAGGAAGAACAAGA+AGG | + | Chr7:17067868-17067887 | MsG0780036953.01.T01:CDS | 35.0% | |
| TAGCAATGATTGGATTGCAA+AGG | - | Chr7:17068942-17068961 | None:intergenic | 35.0% | |
| TAGGTTTGAGGAACTTAACA+TGG | + | Chr7:17068036-17068055 | MsG0780036953.01.T01:CDS | 35.0% | |
| TCAGTAAAAGCAACGTAAGA+CGG | - | Chr7:17066554-17066573 | None:intergenic | 35.0% | |
| ! | ACTGATAGTGAACGATTGAT+CGG | + | Chr7:17066569-17066588 | MsG0780036953.01.T01:CDS | 35.0% |
| ! | GAATCGTGAGAATTGTTGTT+AGG | - | Chr7:17066296-17066315 | None:intergenic | 35.0% |
| ! | GTGTTGATCCAAGTTTATGA+AGG | + | Chr7:17068448-17068467 | MsG0780036953.01.T01:CDS | 35.0% |
| !! | CATGATTGGTGTTAACTACA+AGG | + | Chr7:17067433-17067452 | MsG0780036953.01.T01:CDS | 35.0% |
| !! | GAGAGAAAAGTGTTTGTGTT+AGG | - | Chr7:17066356-17066375 | None:intergenic | 35.0% |
| !! | TCATGACTGTATTGATTCCA+AGG | + | Chr7:17068362-17068381 | MsG0780036953.01.T01:CDS | 35.0% |
| !! | TTGCTGGTTTGAATGTTATG+AGG | + | Chr7:17067621-17067640 | MsG0780036953.01.T01:CDS | 35.0% |
| !!! | GGTTCAAGATTTGTTGCTTT+TGG | + | Chr7:17068297-17068316 | MsG0780036953.01.T01:CDS | 35.0% |
| !!! | GTGTTGATTTTTGATTTGGG+AGG | + | Chr7:17067719-17067738 | MsG0780036953.01.T01:CDS | 35.0% |
| !!! | TTGATTTTTGATTTGGGAGG+TGG | + | Chr7:17067722-17067741 | MsG0780036953.01.T01:CDS | 35.0% |
| AAAATCTTCGCCACCAAGAT+GGG | - | Chr7:17067816-17067835 | None:intergenic | 40.0% | |
| AAACCTTACCCCACTCAATT+GGG | - | Chr7:17067128-17067147 | None:intergenic | 40.0% | |
| AACCAGAGACAACAACTTGT+TGG | + | Chr7:17068483-17068502 | MsG0780036953.01.T01:CDS | 40.0% | |
| ACATACTCAGACAATCAACC+AGG | + | Chr7:17068424-17068443 | MsG0780036953.01.T01:CDS | 40.0% | |
| AGCTGAACCAAGATAAGCTT+CGG | - | Chr7:17067525-17067544 | None:intergenic | 40.0% | |
| ATTACCATCACCAACGACAA+AGG | + | Chr7:17068637-17068656 | MsG0780036953.01.T01:CDS | 40.0% | |
| CATGATGTTGTTCTTGTTGG+TGG | + | Chr7:17068130-17068149 | MsG0780036953.01.T01:CDS | 40.0% | |
| CTCTCTCACCTTCATAAACT+TGG | - | Chr7:17068459-17068478 | None:intergenic | 40.0% | |
| GAAATACAAGGCTGAAGATG+AGG | + | Chr7:17068705-17068724 | MsG0780036953.01.T01:CDS | 40.0% | |
| GTGTTTGAGAGATGCTAAGA+TGG | + | Chr7:17068093-17068112 | MsG0780036953.01.T01:CDS | 40.0% | |
| TAAACTTGGATCAACACACC+TGG | - | Chr7:17068445-17068464 | None:intergenic | 40.0% | |
| TAAGTTCCTCAAACCTAGCA+CGG | - | Chr7:17068033-17068052 | None:intergenic | 40.0% | |
| TATCTTGAATGTCTCTGCTG+AGG | + | Chr7:17068588-17068607 | MsG0780036953.01.T01:CDS | 40.0% | |
| TCGAAGCAAACTGTGATTTG+AGG | - | Chr7:17068553-17068572 | None:intergenic | 40.0% | |
| TCTCTCAAACACTTCTCAAC+AGG | - | Chr7:17068085-17068104 | None:intergenic | 40.0% | |
| TGAAGTTGTTGTGAATCGTG+AGG | - | Chr7:17066329-17066348 | None:intergenic | 40.0% | |
| TGAGGAAGCAGAGAAATACA+AGG | + | Chr7:17068693-17068712 | MsG0780036953.01.T01:CDS | 40.0% | |
| TGCAACAGTTGCTGAACTTT+GGG | - | Chr7:17068169-17068188 | None:intergenic | 40.0% | |
| TTCAGAGTGACATGAAGTTG+TGG | + | Chr7:17067375-17067394 | MsG0780036953.01.T01:CDS | 40.0% | |
| TTGGGAAAATTCGAGCTTTC+CGG | + | Chr7:17068502-17068521 | MsG0780036953.01.T01:CDS | 40.0% | |
| ! | AAAACTTGCTCCTTCTTGGT+TGG | - | Chr7:17068400-17068419 | None:intergenic | 40.0% |
| ! | AACCCTGTTAACACCGTTTT+CGG | + | Chr7:17066620-17066639 | MsG0780036953.01.T01:CDS | 40.0% |
| ! | ACCAGAGACAACAACTTGTT+GGG | + | Chr7:17068484-17068503 | MsG0780036953.01.T01:CDS | 40.0% |
| ! | AGAGAAAACTTGCTCCTTCT+TGG | - | Chr7:17068404-17068423 | None:intergenic | 40.0% |
| ! | CATGAAGTTGTGGCCTTTTA+AGG | + | Chr7:17067385-17067404 | MsG0780036953.01.T01:CDS | 40.0% |
| ! | GGTTGATGCAAAGAATGCTT+TGG | + | Chr7:17068741-17068760 | MsG0780036953.01.T01:CDS | 40.0% |
| ! | GTTTCTAGACCAAGAGACAA+TGG | - | Chr7:17068331-17068350 | None:intergenic | 40.0% |
| ! | TACCGAAAACGGTGTTAACA+GGG | - | Chr7:17066625-17066644 | None:intergenic | 40.0% |
| ! | TGATCGATTCAAGAACGCTA+GGG | - | Chr7:17066405-17066424 | None:intergenic | 40.0% |
| ! | TGCGTATGGTCTTGACAAAA+AGG | + | Chr7:17067673-17067692 | MsG0780036953.01.T01:CDS | 40.0% |
| ! | TTACCGAAAACGGTGTTAAC+AGG | - | Chr7:17066626-17066645 | None:intergenic | 40.0% |
| ! | TTGATCGATTCAAGAACGCT+AGG | - | Chr7:17066406-17066425 | None:intergenic | 40.0% |
| AAGTTCCTCAAACCTAGCAC+GGG | - | Chr7:17068032-17068051 | None:intergenic | 45.0% | |
| AATAACACCGGCATCCTTTG+TGG | - | Chr7:17067603-17067622 | None:intergenic | 45.0% | |
| ACAATGGCCGTAAAAGGAGA+AGG | + | Chr7:17066425-17066444 | MsG0780036953.01.T01:exon | 45.0% | |
| AGACAACCTTCCTTTGTCGT+TGG | - | Chr7:17068650-17068669 | None:intergenic | 45.0% | |
| CAAAATCGCTGCTTGTACAG+CGG | - | Chr7:17068257-17068276 | None:intergenic | 45.0% | |
| CAAAATCTTCGCCACCAAGA+TGG | - | Chr7:17067817-17067836 | None:intergenic | 45.0% | |
| CAAACCTTACCCCACTCAAT+TGG | - | Chr7:17067129-17067148 | None:intergenic | 45.0% | |
| CAAAGTTCAGCAACTGTTGC+AGG | + | Chr7:17068168-17068187 | MsG0780036953.01.T01:CDS | 45.0% | |
| CAATTGACGCTGCAATTCAG+TGG | + | Chr7:17068854-17068873 | MsG0780036953.01.T01:CDS | 45.0% | |
| CAATTGAGTGGGGTAAGGTT+TGG | + | Chr7:17067127-17067146 | MsG0780036953.01.T01:intron | 45.0% | |
| CACCACAATTCCAACCAAGA+AGG | + | Chr7:17068387-17068406 | MsG0780036953.01.T01:CDS | 45.0% | |
| CCTGCGATTGGAATAGATCT+GGG | + | Chr7:17066449-17066468 | MsG0780036953.01.T01:CDS | 45.0% | |
| CGACAAAGGAAGGTTGTCTA+AGG | + | Chr7:17068651-17068670 | MsG0780036953.01.T01:CDS | 45.0% | |
| CGATCAACAATGGCCGTAAA+AGG | + | Chr7:17066419-17066438 | MsG0780036953.01.T01:exon | 45.0% | |
| CGTATTCGTGTGTTGGAGTA+TGG | + | Chr7:17066477-17066496 | MsG0780036953.01.T01:CDS | 45.0% | |
| CGTTCGGTTTCCTTGATCAT+TGG | - | Chr7:17066528-17066547 | None:intergenic | 45.0% | |
| CTCCTTCTTGGTTGGAATTG+TGG | - | Chr7:17068392-17068411 | None:intergenic | 45.0% | |
| CTGCAACAGTTGCTGAACTT+TGG | - | Chr7:17068170-17068189 | None:intergenic | 45.0% | |
| CTGCTGAGGACAAAACAACT+GGG | + | Chr7:17068602-17068621 | MsG0780036953.01.T01:CDS | 45.0% | |
| CTGTGATTTGAGGAACACCA+CGG | - | Chr7:17068543-17068562 | None:intergenic | 45.0% | |
| CTGTTGCAGGACTTCTTCAA+TGG | + | Chr7:17068181-17068200 | MsG0780036953.01.T01:CDS | 45.0% | |
| GACAAAAAGGCGACAAGTGT+TGG | + | Chr7:17067686-17067705 | MsG0780036953.01.T01:CDS | 45.0% | |
| GAGATCATCGCCAATGATCA+AGG | + | Chr7:17066515-17066534 | MsG0780036953.01.T01:CDS | 45.0% | |
| GAGATTGCCGAAGCTTATCT+TGG | + | Chr7:17067515-17067534 | MsG0780036953.01.T01:CDS | 45.0% | |
| GAGTGGTGAAGGAAATGAGA+AGG | + | Chr7:17068276-17068295 | MsG0780036953.01.T01:CDS | 45.0% | |
| GATGTCACTCCATTGTCTCT+TGG | + | Chr7:17068319-17068338 | MsG0780036953.01.T01:CDS | 45.0% | |
| GATTCAAGAACGCTAGGGTT+TGG | - | Chr7:17066400-17066419 | None:intergenic | 45.0% | |
| GCAGGACTTCTTCAATGGTA+AGG | + | Chr7:17068186-17068205 | MsG0780036953.01.T01:CDS | 45.0% | |
| GCTAAGATGTATCAAGGTGG+AGG | + | Chr7:17068958-17068977 | MsG0780036953.01.T01:CDS | 45.0% | |
| GGAACAACGTATTCGTGTGT+TGG | + | Chr7:17066470-17066489 | MsG0780036953.01.T01:CDS | 45.0% | |
| GGACCAGCAGTAACCTTAAA+AGG | - | Chr7:17067401-17067420 | None:intergenic | 45.0% | |
| GTTGGAATTGTGGTGTTCCT+TGG | - | Chr7:17068382-17068401 | None:intergenic | 45.0% | |
| TCCCAACAAGTTGTTGTCTC+TGG | - | Chr7:17068488-17068507 | None:intergenic | 45.0% | |
| TCCTGCGATTGGAATAGATC+TGG | + | Chr7:17066448-17066467 | MsG0780036953.01.T01:CDS | 45.0% | |
| TCTCTTGGTCTAGAAACTGC+TGG | + | Chr7:17068334-17068353 | MsG0780036953.01.T01:CDS | 45.0% | |
| TCTGCTGAGGACAAAACAAC+TGG | + | Chr7:17068601-17068620 | MsG0780036953.01.T01:CDS | 45.0% | |
| TGAGAGTCGTTGAAGTAAGC+TGG | - | Chr7:17067572-17067591 | None:intergenic | 45.0% | |
| TGCTTCGACATTGATGCCAA+TGG | + | Chr7:17068565-17068584 | MsG0780036953.01.T01:CDS | 45.0% | |
| TGTGATTTGAGGAACACCAC+GGG | - | Chr7:17068542-17068561 | None:intergenic | 45.0% | |
| ! | GGATCTGTTCAGGAAGTGTA+TGG | + | Chr7:17068057-17068076 | MsG0780036953.01.T01:CDS | 45.0% |
| ! | GTACAAGCAGCGATTTTGAG+TGG | + | Chr7:17068259-17068278 | MsG0780036953.01.T01:CDS | 45.0% |
| ! | TCAATCTCCGAAGTGCTCTA+GGG | - | Chr7:17067907-17067926 | None:intergenic | 45.0% |
| ! | TGGTGTTAACTACAAGGGTG+AGG | + | Chr7:17067439-17067458 | MsG0780036953.01.T01:CDS | 45.0% |
| ! | TTTAAGGTTACTGCTGGTCC+TGG | + | Chr7:17067401-17067420 | MsG0780036953.01.T01:CDS | 45.0% |
| ! | TTTGAAGTTAAGGCCACTGC+TGG | + | Chr7:17067785-17067804 | MsG0780036953.01.T01:CDS | 45.0% |
| !!! | TGGCCTTTTAAGGTTACTGC+TGG | + | Chr7:17067395-17067414 | MsG0780036953.01.T01:CDS | 45.0% |
| !!! | TTTTTATATTGAAATTTAAT+TGG | + | Chr7:17067256-17067275 | MsG0780036953.01.T01:intron | 5.0% |
| AAACCTAGCACGGGTGATTG+TGG | - | Chr7:17068023-17068042 | None:intergenic | 50.0% | |
| AAAGGAGAAGGTCCTGCGAT+TGG | + | Chr7:17066437-17066456 | MsG0780036953.01.T01:CDS | 50.0% | |
| AAGATGGGTATCACCAGCAG+TGG | - | Chr7:17067801-17067820 | None:intergenic | 50.0% | |
| AATCACCCGTGCTAGGTTTG+AGG | + | Chr7:17068024-17068043 | MsG0780036953.01.T01:CDS | 50.0% | |
| ACTGCAGCAGCTATTGCGTA+TGG | + | Chr7:17067659-17067678 | MsG0780036953.01.T01:CDS | 50.0% | |
| ACTGCTGGTGATACCCATCT+TGG | + | Chr7:17067800-17067819 | MsG0780036953.01.T01:CDS | 50.0% | |
| ATGTAGCCGACCCAATTGAG+TGG | + | Chr7:17067115-17067134 | MsG0780036953.01.T01:intron | 50.0% | |
| CATATGCAACAGCCTCGTCT+GGG | - | Chr7:17068231-17068250 | None:intergenic | 50.0% | |
| CCATCACCAACGACAAAGGA+AGG | + | Chr7:17068641-17068660 | MsG0780036953.01.T01:CDS | 50.0% | |
| CCCAGATCTATTCCAATCGC+AGG | - | Chr7:17066452-17066471 | None:intergenic | 50.0% | |
| CCTGGTGAAAAGCCCATGAT+TGG | + | Chr7:17067419-17067438 | MsG0780036953.01.T01:CDS | 50.0% | |
| CGGTGATGCTGCTAAGAATC+AGG | + | Chr7:17066589-17066608 | MsG0780036953.01.T01:CDS | 50.0% | |
| CTTACCCCACTCAATTGGGT+CGG | - | Chr7:17067124-17067143 | None:intergenic | 50.0% | |
| CTTGGTCTAGAAACTGCTGG+TGG | + | Chr7:17068337-17068356 | MsG0780036953.01.T01:CDS | 50.0% | |
| GTGATTTGAGGAACACCACG+GGG | - | Chr7:17068541-17068560 | None:intergenic | 50.0% | |
| GTGGTTGGACAGTAACCAGT+TGG | + | Chr7:17068873-17068892 | MsG0780036953.01.T01:CDS | 50.0% | |
| TACGCAATAGCTGCTGCAGT+AGG | - | Chr7:17067659-17067678 | None:intergenic | 50.0% | |
| TCCATACCACCAGCCATATC+AGG | - | Chr7:17068988-17069007 | None:intergenic | 50.0% | |
| TCCTGATATGGCTGGTGGTA+TGG | + | Chr7:17068984-17069003 | MsG0780036953.01.T01:CDS | 50.0% | |
| TGACGCTGCAATTCAGTGGT+TGG | + | Chr7:17068858-17068877 | MsG0780036953.01.T01:CDS | 50.0% | |
| TGTAGCCGACCCAATTGAGT+GGG | + | Chr7:17067116-17067135 | MsG0780036953.01.T01:intron | 50.0% | |
| ! | CCAATCATGGGCTTTTCACC+AGG | - | Chr7:17067422-17067441 | None:intergenic | 50.0% |
| ! | CCTTCCTTTGTCGTTGGTGA+TGG | - | Chr7:17068644-17068663 | None:intergenic | 50.0% |
| ! | CGCAGGACCTTCTCCTTTTA+CGG | - | Chr7:17066435-17066454 | None:intergenic | 50.0% |
| ! | CTCAATCTCCGAAGTGCTCT+AGG | - | Chr7:17067908-17067927 | None:intergenic | 50.0% |
| ! | GTGGTAACCCTAGAGCACTT+CGG | + | Chr7:17067897-17067916 | MsG0780036953.01.T01:CDS | 50.0% |
| !! | AAGGATGCCGGTGTTATTGC+TGG | + | Chr7:17067605-17067624 | MsG0780036953.01.T01:CDS | 50.0% |
| !! | CAAGAGTATCAACCCAGACG+AGG | + | Chr7:17068216-17068235 | MsG0780036953.01.T01:CDS | 50.0% |
| !! | GCAGCGATTTTGAGTGGTGA+AGG | + | Chr7:17068265-17068284 | MsG0780036953.01.T01:CDS | 50.0% |
| ACACCACAATCACCCGTGCT+AGG | + | Chr7:17068017-17068036 | MsG0780036953.01.T01:CDS | 55.0% | |
| ACTCATCAGCCTCTGCCAAC+TGG | - | Chr7:17068891-17068910 | None:intergenic | 55.0% | |
| CAACGTAAGACGGCGTCGTT+CGG | - | Chr7:17066544-17066563 | None:intergenic | 55.0% | |
| CCAGACGAGGCTGTTGCATA+TGG | + | Chr7:17068229-17068248 | MsG0780036953.01.T01:CDS | 55.0% | |
| CCATATGCAACAGCCTCGTC+TGG | - | Chr7:17068232-17068251 | None:intergenic | 55.0% | |
| CGACCCAATTGAGTGGGGTA+AGG | + | Chr7:17067122-17067141 | MsG0780036953.01.T01:intron | 55.0% | |
| CGTCAAGCCACAAAGGATGC+CGG | + | Chr7:17067593-17067612 | MsG0780036953.01.T01:CDS | 55.0% | |
| CTCTCAGCGTCAAGCCACAA+AGG | + | Chr7:17067586-17067605 | MsG0780036953.01.T01:CDS | 55.0% | |
| GATGAAGTTCCTCCAGCAGC+AGG | + | Chr7:17069009-17069028 | MsG0780036953.01.T01:CDS | 55.0% | |
| GCTGGTGATACCCATCTTGG+TGG | + | Chr7:17067803-17067822 | MsG0780036953.01.T01:CDS | 55.0% | |
| GGACAGTAACCAGTTGGCAG+AGG | + | Chr7:17068879-17068898 | MsG0780036953.01.T01:CDS | 55.0% | |
| GTAGCCGACCCAATTGAGTG+GGG | + | Chr7:17067117-17067136 | MsG0780036953.01.T01:intron | 55.0% | |
| !! | AGGTGGAGGTGCTCCTGATA+TGG | + | Chr7:17068972-17068991 | MsG0780036953.01.T01:CDS | 55.0% |
| GAAGTTCCTCCAGCAGCAGG+TGG | + | Chr7:17069012-17069031 | MsG0780036953.01.T01:CDS | 60.0% | |
| GGTGCTCCTGATATGGCTGG+TGG | + | Chr7:17068979-17068998 | MsG0780036953.01.T01:CDS | 60.0% | |
| !! | GGAGGTGCTCCTGATATGGC+TGG | + | Chr7:17068976-17068995 | MsG0780036953.01.T01:CDS | 60.0% |
| ACGGGGAGCTGGAGGAATGC+CGG | - | Chr7:17068524-17068543 | None:intergenic | 65.0% | |
| TGAGGAACACCACGGGGAGC+TGG | - | Chr7:17068535-17068554 | None:intergenic | 65.0% | |
| CCAGCACCACCTGCTGCTGG+AGG | - | Chr7:17069021-17069040 | None:intergenic | 70.0% | |
| CCTCCAGCAGCAGGTGGTGC+TGG | + | Chr7:17069018-17069037 | MsG0780036953.01.T01:CDS | 70.0% | |
| GGAACACCACGGGGAGCTGG+AGG | - | Chr7:17068532-17068551 | None:intergenic | 70.0% | |
| GGACCAGCACCACCTGCTGC+TGG | - | Chr7:17069024-17069043 | None:intergenic | 70.0% | |
| GGCATTCCTCCAGCTCCCCG+TGG | + | Chr7:17068523-17068542 | MsG0780036953.01.T01:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 17066268 | 17069065 | 17066268 | ID=MsG0780036953.01;Name=MsG0780036953.01 |
| Chr7 | mRNA | 17066268 | 17069065 | 17066268 | ID=MsG0780036953.01.T01;Parent=MsG0780036953.01;Name=MsG0780036953.01.T01;_AED=0.47;_eAED=0.47;_QI=160|0|0.5|1|1|1|2|0|663 |
| Chr7 | exon | 17066268 | 17066641 | 17066268 | ID=MsG0780036953.01.T01:exon:3159;Parent=MsG0780036953.01.T01 |
| Chr7 | exon | 17067288 | 17069065 | 17067288 | ID=MsG0780036953.01.T01:exon:3160;Parent=MsG0780036953.01.T01 |
| Chr7 | five_prime_UTR | 17066268 | 17066427 | 17066268 | ID=MsG0780036953.01.T01:five_prime_utr;Parent=MsG0780036953.01.T01 |
| Chr7 | CDS | 17066428 | 17066641 | 17066428 | ID=MsG0780036953.01.T01:cds;Parent=MsG0780036953.01.T01 |
| Chr7 | CDS | 17067288 | 17069065 | 17067288 | ID=MsG0780036953.01.T01:cds;Parent=MsG0780036953.01.T01 |
| Gene Sequence |
| Protein sequence |
