AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180000494.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180000494.01.T01 MTR_1g014680 95.553 832 35 2 1 831 1 831 0.0 1649
MsG0180000494.01.T01 MTR_2g071620 52.011 373 176 2 121 491 403 774 9.84e-125 398
MsG0180000494.01.T01 MTR_5g032380 53.371 356 160 3 162 515 405 756 2.67e-124 397
MsG0180000494.01.T01 MTR_5g066000 51.852 378 177 3 136 510 497 872 2.04e-123 397
MsG0180000494.01.T01 MTR_3g100480 52.925 359 168 1 136 494 539 896 2.68e-123 398
MsG0180000494.01.T01 MTR_3g100480 46.065 432 197 4 97 494 497 926 6.44e-117 382
MsG0180000494.01.T01 MTR_4g130940 40.836 311 170 7 182 486 93 395 4.75e-65 233
MsG0180000494.01.T01 MTR_4g130940 40.836 311 170 7 182 486 93 395 1.46e-64 232
MsG0180000494.01.T01 MTR_2g070390 36.524 397 236 10 179 566 20 409 3.39e-61 219
MsG0180000494.01.T01 MTR_6g022310 37.855 317 176 11 177 486 123 425 6.55e-55 201
MsG0180000494.01.T01 MTR_6g022290 36.741 313 185 8 177 486 25 327 2.06e-53 195
MsG0180000494.01.T01 MTR_6g022300 36.278 317 181 10 177 486 63 365 3.57e-50 187
MsG0180000494.01.T01 MTR_5g030360 31.707 369 215 9 139 486 97 449 1.01e-49 187
MsG0180000494.01.T01 MTR_8g067060 31.833 311 189 8 182 486 204 497 4.87e-44 168
MsG0180000494.01.T01 MTR_8g471100 31.833 311 189 8 182 486 213 506 5.15e-44 168
MsG0180000494.01.T01 MTR_5g430360 34.343 297 173 8 196 486 1 281 5.38e-44 167
MsG0180000494.01.T01 MTR_8g064910 31.546 317 188 11 182 486 55 354 3.06e-35 139
MsG0180000494.01.T01 MTR_3g087140 30.408 319 184 8 182 470 24 334 1.13e-32 130
MsG0180000494.01.T01 MTR_8g090190 29.467 319 187 9 182 470 24 334 1.76e-31 127
MsG0180000494.01.T01 MTR_0279s0020 30.449 312 185 9 182 486 6 292 2.60e-30 123
MsG0180000494.01.T01 MTR_1g014260 28.161 348 198 11 182 484 182 522 9.56e-30 126
MsG0180000494.01.T01 MTR_0279s0020 30.476 315 186 10 188 494 3 292 4.78e-29 118
MsG0180000494.01.T01 MTR_4g115880 25.879 398 197 14 176 484 190 578 7.90e-26 113
MsG0180000494.01.T01 MTR_1g010040 27.647 340 209 11 142 467 67 383 4.75e-24 109
MsG0180000494.01.T01 MTR_1g010040 27.647 340 209 11 142 467 67 383 6.00e-24 108
MsG0180000494.01.T01 MTR_2g087710 37.419 155 91 3 339 490 714 865 1.40e-22 104
MsG0180000494.01.T01 MTR_4g111860 29.448 326 191 13 180 486 85 390 4.67e-22 100
MsG0180000494.01.T01 MTR_3g108660 27.090 299 186 10 180 467 106 383 5.50e-20 96.3
MsG0180000494.01.T01 MTR_3g108660 27.090 299 186 10 180 467 106 383 5.83e-20 96.3
MsG0180000494.01.T01 MTR_1g077980 37.500 152 88 4 339 486 762 910 2.71e-18 90.5
MsG0180000494.01.T01 MTR_7g106570 27.935 247 152 9 262 494 661 895 1.79e-17 87.8
MsG0180000494.01.T01 MTR_7g088760 29.245 212 141 6 282 487 693 901 7.71e-16 82.8
MsG0180000494.01.T01 MTR_7g088760 29.245 212 141 6 282 487 710 918 8.78e-16 82.4
MsG0180000494.01.T01 MTR_3g083600 37.121 132 62 4 373 486 941 1069 2.81e-14 77.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180000494.01.T01 AT2G24640 63.619 514 167 6 6 513 5 504 0.0 677
MsG0180000494.01.T01 AT4G31670 63.860 487 164 3 6 492 5 479 0.0 653
MsG0180000494.01.T01 AT2G24640 74.251 334 84 1 180 513 3 334 0.0 544
MsG0180000494.01.T01 AT1G17110 50.521 384 185 1 160 543 421 799 4.42e-128 407
MsG0180000494.01.T01 AT1G17110 50.521 384 185 1 160 543 417 795 4.51e-128 406
MsG0180000494.01.T01 AT1G17110 50.521 384 185 1 160 543 417 795 4.51e-128 406
MsG0180000494.01.T01 AT4G24560 50.575 348 170 2 161 508 523 868 5.27e-115 374
MsG0180000494.01.T01 AT5G65450 52.870 331 151 3 162 491 311 637 1.27e-108 350
MsG0180000494.01.T01 AT5G65450 52.870 331 151 3 162 491 330 656 3.54e-108 349
MsG0180000494.01.T01 AT5G57990 38.636 308 182 5 181 486 107 409 8.21e-63 228
MsG0180000494.01.T01 AT3G14400 37.791 344 191 8 170 499 13 347 1.52e-60 218
MsG0180000494.01.T01 AT5G46740 34.251 327 197 9 171 486 149 468 2.02e-44 172
MsG0180000494.01.T01 AT4G17895 32.911 316 192 10 182 490 177 479 2.44e-38 153
MsG0180000494.01.T01 AT5G46740 36.681 229 134 6 262 486 38 259 6.88e-34 137
MsG0180000494.01.T01 AT2G22310 29.430 316 190 8 182 470 24 333 4.16e-33 132
MsG0180000494.01.T01 AT4G39910 28.660 321 191 8 182 470 24 338 1.29e-31 127
MsG0180000494.01.T01 AT2G22310 28.383 303 184 8 195 470 5 301 1.91e-28 117
MsG0180000494.01.T01 AT2G22310 28.094 299 182 8 199 470 4 296 4.97e-27 113
MsG0180000494.01.T01 AT5G10790 27.596 366 197 12 182 489 49 404 1.09e-23 105
MsG0180000494.01.T01 AT5G10790 27.596 366 197 12 182 489 178 533 5.29e-23 104
MsG0180000494.01.T01 AT3G49600 26.000 300 187 10 180 467 105 381 3.93e-20 96.7
MsG0180000494.01.T01 AT3G49600 26.000 300 187 10 180 467 105 381 3.94e-20 96.7
MsG0180000494.01.T01 AT3G49600 26.000 300 187 10 180 467 105 381 3.94e-20 96.7
MsG0180000494.01.T01 AT5G22030 37.013 154 90 4 339 488 720 870 5.36e-20 96.3
MsG0180000494.01.T01 AT5G22030 37.013 154 90 4 339 488 762 912 5.38e-20 96.3
MsG0180000494.01.T01 AT4G10590 35.673 171 100 5 339 505 745 909 8.68e-19 92.4
MsG0180000494.01.T01 AT4G10590 35.673 171 100 5 339 505 745 909 8.68e-19 92.4
MsG0180000494.01.T01 AT4G10590 35.673 171 100 5 339 505 745 909 8.68e-19 92.4
MsG0180000494.01.T01 AT4G10590 35.673 171 100 5 339 505 745 909 8.68e-19 92.4
MsG0180000494.01.T01 AT4G10570 35.088 171 101 5 339 505 746 910 7.36e-18 89.4
MsG0180000494.01.T01 AT1G32850 34.194 155 95 4 339 489 731 882 1.69e-16 84.7
MsG0180000494.01.T01 AT1G04860 36.719 128 64 4 373 486 832 956 3.24e-15 80.9
MsG0180000494.01.T01 AT2G40930 32.704 159 99 5 333 486 760 915 4.90e-14 77.0
MsG0180000494.01.T01 AT2G40930 32.704 159 99 5 333 486 760 915 4.90e-14 77.0
MsG0180000494.01.T01 AT3G11910 24.611 321 192 14 177 477 195 485 1.08e-13 75.9
MsG0180000494.01.T01 AT3G11910 24.611 321 192 14 177 477 195 485 1.08e-13 75.9
MsG0180000494.01.T01 AT3G11910 24.611 321 192 14 177 477 196 486 1.14e-13 75.9
MsG0180000494.01.T01 AT3G11910 24.611 321 192 14 177 477 196 486 1.14e-13 75.9
MsG0180000494.01.T01 AT5G06600 25.077 323 188 15 177 477 197 487 1.23e-13 75.5
MsG0180000494.01.T01 AT5G06600 25.077 323 188 15 177 477 196 486 1.27e-13 75.5
MsG0180000494.01.T01 AT5G06600 25.077 323 188 15 177 477 197 487 1.38e-13 75.5
MsG0180000494.01.T01 AT2G32780 37.121 132 62 5 373 486 954 1082 2.31e-13 74.7

Find 215 sgRNAs with CRISPR-Local

Find 385 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGGCAATTGTAAGAATATT+TGG 0.129076 1:+6912702 None:intergenic
GGCAACTAATGGTGTGTTTA+AGG 0.166498 1:-6914905 MsG0180000494.01.T01:CDS
CCTAATATCGGTGGTACTTT+AGG 0.209819 1:-6913762 MsG0180000494.01.T01:CDS
CTACGTTGAATTGTGATTCT+AGG 0.218939 1:+6915924 None:intergenic
AATTTGTTAAACTATTTAAC+TGG 0.221244 1:-6914210 MsG0180000494.01.T01:CDS
GTGTTTAAGGCTTCTGCTGC+TGG 0.231659 1:-6914892 MsG0180000494.01.T01:CDS
TAAAAGAAAATTACATCTTT+AGG 0.232918 1:+6914802 None:intergenic
TCTGCTACATCAAGGATTTC+AGG 0.234092 1:-6912234 MsG0180000494.01.T01:CDS
AGATTTGATTGATGTGGATA+TGG 0.257969 1:-6910990 MsG0180000494.01.T01:CDS
ACCGCTCTTGTAATCGCTAT+TGG 0.263025 1:-6915844 MsG0180000494.01.T01:CDS
CATATATGCTGTTGTATAAA+AGG 0.272790 1:-6912033 MsG0180000494.01.T01:intron
CAACAGTCGCATTGGAATTC+CGG 0.278181 1:-6914988 MsG0180000494.01.T01:CDS
TCTGTTTGCCTTGATGAATT+TGG 0.280351 1:-6913551 MsG0180000494.01.T01:CDS
CCAGAAGAAACCTTTGATTC+TGG 0.284036 1:+6911472 None:intergenic
TCGAAATGTGGAGGAAGATT+TGG 0.318936 1:-6910834 MsG0180000494.01.T01:CDS
CCTAAAGTACCACCGATATT+AGG 0.326433 1:+6913762 None:intergenic
ATCGGTGGTACTTTAGGTTA+TGG 0.331235 1:-6913756 MsG0180000494.01.T01:CDS
GCTAACGACGATGCATATTA+TGG 0.332647 1:-6910776 MsG0180000494.01.T01:CDS
CAAGAATTGAAGGTTTCTTC+TGG 0.335200 1:-6911319 MsG0180000494.01.T01:CDS
TTCTGGGGTTTCTTAATTTG+TGG 0.339395 1:-6910526 MsG0180000494.01.T01:three_prime_UTR
ATTCAAACTACCGAATCTTC+AGG 0.340313 1:-6911616 MsG0180000494.01.T01:CDS
AATTGCCTTGAAAAGATTCC+AGG 0.348423 1:-6912688 MsG0180000494.01.T01:intron
CCGGATGAAACCTTCAATTC+TGG 0.349146 1:+6911169 None:intergenic
ATCTTCAACAACATGAGAAA+TGG 0.349453 1:+6911009 None:intergenic
TTTCAGGCATTTGTAATGAT+TGG 0.354105 1:-6913872 MsG0180000494.01.T01:intron
TTAAGAAATTACATTCATTT+CGG 0.357403 1:+6913964 None:intergenic
TCTGGGGTTTCTTAATTTGT+GGG 0.360237 1:-6910525 MsG0180000494.01.T01:three_prime_UTR
AGCTGTCCCTTCTAACCTTC+AGG 0.361138 1:-6913519 MsG0180000494.01.T01:CDS
TTTACAACGGGAGCACTTCT+TGG 0.364394 1:+6915669 None:intergenic
TAAGGTTGCTTGTGTGGAAT+TGG 0.364996 1:-6912077 MsG0180000494.01.T01:intron
CGTTTAGCTTCGGAATTCAA+TGG 0.369885 1:+6911274 None:intergenic
AGTTAAGAACACCGGGCATT+GGG 0.372286 1:+6915731 None:intergenic
GCCGCTTGTTGCCTACTTGT+TGG 0.374111 1:-6913997 MsG0180000494.01.T01:CDS
GTTGTAAAGGCGTTCGATAT+TGG 0.375635 1:-6915654 MsG0180000494.01.T01:intron
ACTCTCAAATGTGAAGGATT+TGG 0.377040 1:-6911233 MsG0180000494.01.T01:CDS
ATTGGAGGAGGTGCTTTCTC+AGG 0.377052 1:-6912059 MsG0180000494.01.T01:CDS
GGGCTAAGATTTAAAGTCTC+AGG 0.378765 1:+6912355 None:intergenic
AACAGTCGCATTGGAATTCC+GGG 0.387892 1:-6914987 MsG0180000494.01.T01:CDS
ACATCTTTAGGCTTCTTGAT+AGG 0.387941 1:+6914814 None:intergenic
TGTTTAAGGCTTCTGCTGCT+GGG 0.390727 1:-6914891 MsG0180000494.01.T01:CDS
ACACCATTAGTTGCCCCATT+TGG 0.392340 1:+6914913 None:intergenic
AAGCATTTAACATATCAATA+TGG 0.393717 1:+6912275 None:intergenic
CTATCTCGTTTGCCTAATAT+CGG 0.393985 1:-6913774 MsG0180000494.01.T01:CDS
GCTGGGTCTTGTCCTTCTCC+AGG 0.397149 1:-6910911 MsG0180000494.01.T01:CDS
CCAGAATCAAAGGTTTCTTC+TGG 0.404756 1:-6911472 MsG0180000494.01.T01:CDS
TTCTTAATTTGTGGGAACCT+TGG 0.405292 1:-6910517 MsG0180000494.01.T01:three_prime_UTR
ACAGAAAAGGACAGAGGAAA+TGG 0.411132 1:-6910671 MsG0180000494.01.T01:CDS
TCAAGGATTTCAGGGGAAAC+TGG 0.412917 1:-6912225 MsG0180000494.01.T01:CDS
ACTGTTAAAGAGTGGCTTGA+TGG 0.417050 1:-6913013 MsG0180000494.01.T01:CDS
AGCTTCTGAGTTCAATTCAA+TGG 0.418219 1:+6911432 None:intergenic
CAGCCTGAAGTCTCTTCTAT+AGG 0.419780 1:+6910962 None:intergenic
ATTGGGGAGGTGGGAGAAGA+AGG 0.422557 1:+6915748 None:intergenic
GCTGCTGTTTGGCAGGTGTC+AGG 0.425121 1:-6912766 MsG0180000494.01.T01:intron
ATATCGAACGCCTTTACAAC+GGG 0.425342 1:+6915657 None:intergenic
GTATTTAACTCGGCTCCAAA+TGG 0.425765 1:-6914928 MsG0180000494.01.T01:CDS
CCTCTCAAATGTGAAGGCCT+TGG 0.426701 1:-6911536 MsG0180000494.01.T01:CDS
ATTTCAGGGGAAACTGGTAT+AGG 0.426965 1:-6912219 MsG0180000494.01.T01:CDS
TACATGCAGAGTGGGAGGTT+TGG 0.427282 1:-6912403 MsG0180000494.01.T01:intron
ATTCGGTAGTTTGAATTTGA+AGG 0.428268 1:+6911623 None:intergenic
TCACCACCTCTTTCCGATGA+TGG 0.428776 1:+6910564 None:intergenic
CGAACAGTGGAAGTGGAACC+TGG 0.429811 1:-6911580 MsG0180000494.01.T01:CDS
CTAGTGGTTACGGTACTTCC+AGG 0.430005 1:-6914837 MsG0180000494.01.T01:CDS
AGTTTAACAAATTCATCATA+AGG 0.431172 1:+6914220 None:intergenic
AACACCGGGCATTGGGGAGG+TGG 0.435518 1:+6915738 None:intergenic
TCTCCAGCTTCACTCATGTA+AGG 0.436136 1:+6912334 None:intergenic
GCTCCAAATGGGGCAACTAA+TGG 0.437343 1:-6914916 MsG0180000494.01.T01:CDS
AGGTGTACTGCCCGACCATC+AGG 0.437934 1:-6911646 MsG0180000494.01.T01:CDS
TATTTAACTCGGCTCCAAAT+GGG 0.439240 1:-6914927 MsG0180000494.01.T01:CDS
CATTTCTAAGGTTGCTTGTG+TGG 0.445065 1:-6912083 MsG0180000494.01.T01:intron
GACTCTTGAATTGTGGAAAC+AGG 0.446722 1:-6914162 MsG0180000494.01.T01:intron
CTTCATGTGGAGTAGCAGAT+TGG 0.451994 1:+6910732 None:intergenic
TCGGAAAGAGGTGGTGAGTT+GGG 0.452719 1:-6910558 MsG0180000494.01.T01:three_prime_UTR
TACGTTGAATTGTGATTCTA+GGG 0.454479 1:+6915925 None:intergenic
CTGTTAAAGAGTGGCTTGAT+GGG 0.454725 1:-6913012 MsG0180000494.01.T01:CDS
AATTTGAAGGCCTGATGGTC+GGG 0.458437 1:+6911636 None:intergenic
TCTCCCACCTCCCCAATGCC+CGG 0.458535 1:-6915742 MsG0180000494.01.T01:CDS
TGTTGCCTACTTGTTGGAGA+AGG 0.460863 1:-6913991 MsG0180000494.01.T01:CDS
GTTGTCTCCTGAAGGTTAGA+AGG 0.461570 1:+6913512 None:intergenic
TGATATTAGTCCAGAATTGA+AGG 0.462584 1:-6911179 MsG0180000494.01.T01:CDS
AATGATAGAGCATAATTCCT+TGG 0.466495 1:-6910447 MsG0180000494.01.T01:three_prime_UTR
TCTTCAACAACATGAGAAAT+GGG 0.467804 1:+6911010 None:intergenic
GACTTGACAGTTGAAATTCA+TGG 0.470241 1:-6913073 MsG0180000494.01.T01:CDS
CAAGATGATACTGGTGTGGC+TGG 0.472932 1:-6910929 MsG0180000494.01.T01:CDS
CTGCTACATCAAGGATTTCA+GGG 0.473698 1:-6912233 MsG0180000494.01.T01:CDS
TAATATTAGTCAAGAATTGA+AGG 0.477301 1:-6911329 MsG0180000494.01.T01:CDS
GATGTTGAGTCAACTGATAA+TGG 0.478234 1:-6911076 MsG0180000494.01.T01:CDS
GATGTCTAACCTCAGATTGA+AGG 0.479128 1:+6913462 None:intergenic
TCAACGTAGATGCTTGTAAT+CGG 0.479652 1:-6915910 MsG0180000494.01.T01:exon
GAGCGGTGAATATGAATTGA+AGG 0.486940 1:+6915860 None:intergenic
AGACCTATAGAAGAGACTTC+AGG 0.487841 1:-6910965 MsG0180000494.01.T01:CDS
CAGAATGTCAACAGTCGCAT+TGG 0.488151 1:-6914996 MsG0180000494.01.T01:CDS
ACTATTTAACTGGGACAAGC+CGG 0.489316 1:-6914200 MsG0180000494.01.T01:CDS
GAGTTAAGAACACCGGGCAT+TGG 0.490369 1:+6915730 None:intergenic
AGACTGCTCTCGTTTAGCTT+CGG 0.490718 1:+6911264 None:intergenic
TTCAAACTACCGAATCTTCA+GGG 0.492835 1:-6911615 MsG0180000494.01.T01:CDS
AGCTTCGGAATTCAATGGAA+TGG 0.494486 1:+6911279 None:intergenic
GTTGCCTACTTGTTGGAGAA+GGG 0.495969 1:-6913990 MsG0180000494.01.T01:CDS
TGGAGATGCTGCCTCGTTGG+AGG 0.497630 1:-6913053 MsG0180000494.01.T01:CDS
TTTAGGCTTCTTGATAGGCC+TGG 0.501943 1:+6914819 None:intergenic
GAAGCGCAAACAGCACAAAC+AGG 0.506304 1:+6915700 None:intergenic
CACCACCTCTTTCCGATGAT+GGG 0.508484 1:+6910565 None:intergenic
AGCCCTTACATGAGTGAAGC+TGG 0.509985 1:-6912337 MsG0180000494.01.T01:CDS
GCGCAAGATCAAGATGATAC+TGG 0.513020 1:-6910938 MsG0180000494.01.T01:CDS
GGTTGCTTGTGTGGAATTGG+AGG 0.513299 1:-6912074 MsG0180000494.01.T01:CDS
AGGAAATGGAATTAAGAAAG+TGG 0.515604 1:-6910657 MsG0180000494.01.T01:CDS
GTTTAAGGCTTCTGCTGCTG+GGG 0.516084 1:-6914890 MsG0180000494.01.T01:CDS
CCAGAATTGAAGGTTTCATC+CGG 0.517764 1:-6911169 MsG0180000494.01.T01:CDS
AGAAATTACATTCATTTCGG+TGG 0.518618 1:+6913967 None:intergenic
AAACGAGATAGAATATTCAT+TGG 0.521393 1:+6913786 None:intergenic
ATCGGAAAGAGGTGGTGAGT+TGG 0.522639 1:-6910559 MsG0180000494.01.T01:three_prime_UTR
CCTTGTGGACTCTTGAATTG+TGG 0.523172 1:-6914169 MsG0180000494.01.T01:CDS
TCATGGAGATGCTGCCTCGT+TGG 0.523431 1:-6913056 MsG0180000494.01.T01:CDS
GATTTGATTGATGTGGATAT+GGG 0.526237 1:-6910989 MsG0180000494.01.T01:CDS
AAAAGAGCGAACAGTGGAAG+TGG 0.526891 1:-6911587 MsG0180000494.01.T01:CDS
AAGAAGTGCTCCCGTTGTAA+AGG 0.526930 1:-6915667 MsG0180000494.01.T01:CDS
GAAAATATGTATAAATGTGA+GGG 0.527072 1:-6912989 MsG0180000494.01.T01:CDS
GGCTAAGATTTAAAGTCTCA+GGG 0.529508 1:+6912356 None:intergenic
TGCTTCCTATCCCACAGAAA+AGG 0.530729 1:-6910684 MsG0180000494.01.T01:CDS
TGGTGGTCGCCTTCAATCTG+AGG 0.532511 1:-6913471 MsG0180000494.01.T01:intron
CTATTTAACTGGGACAAGCC+GGG 0.536675 1:-6914199 MsG0180000494.01.T01:CDS
TGCTTGTGTGGAATTGGAGG+AGG 0.537419 1:-6912071 MsG0180000494.01.T01:CDS
ACAACGGGAGCACTTCTTGG+TGG 0.537857 1:+6915672 None:intergenic
TTTCTCCACCAAATTCATCA+AGG 0.540291 1:+6913543 None:intergenic
AAGGATTTGGCTTGCAGTAG+AGG 0.541242 1:-6911220 MsG0180000494.01.T01:CDS
GTTTGCCTTGATGAATTTGG+TGG 0.542148 1:-6913548 MsG0180000494.01.T01:CDS
GCACTGGTACCTAGTGGTTA+CGG 0.542766 1:-6914847 MsG0180000494.01.T01:CDS
GACGATGCATATTATGGCAA+TGG 0.543723 1:-6910770 MsG0180000494.01.T01:CDS
TCATTACATCTGCTACATCA+AGG 0.545852 1:-6912242 MsG0180000494.01.T01:CDS
AAATCAGTATGAAAGTATGA+TGG 0.546011 1:-6913095 MsG0180000494.01.T01:CDS
GAATTTGAAGGCCTGATGGT+CGG 0.546387 1:+6911635 None:intergenic
ACACCGGGCATTGGGGAGGT+GGG 0.548171 1:+6915739 None:intergenic
AGCGGATAAGTTAATAATGT+AGG 0.548228 1:-6910627 MsG0180000494.01.T01:exon
AAAGTCATGTTGAAAGAGCA+AGG 0.548323 1:-6913830 MsG0180000494.01.T01:CDS
AAGAGCAAGGCTAAGTTCAC+AGG 0.548821 1:-6913817 MsG0180000494.01.T01:CDS
AGTCCACAAGGAGGAAATCC+CGG 0.549196 1:+6914181 None:intergenic
TGATATTAGTCCAGAATCAA+AGG 0.549744 1:-6911482 MsG0180000494.01.T01:CDS
TATCATTTATATCCCATCAT+CGG 0.550090 1:-6910577 MsG0180000494.01.T01:three_prime_UTR
AGGATCGAATTTGATTGCAC+TGG 0.551144 1:-6914863 MsG0180000494.01.T01:CDS
TGTTGAAGATTTGATTGATG+TGG 0.552841 1:-6910996 MsG0180000494.01.T01:CDS
CGGTGCCAATGTATTTAACT+CGG 0.553052 1:-6914938 MsG0180000494.01.T01:CDS
TACATGAGTGAAGCTGGAGA+TGG 0.554559 1:-6912331 MsG0180000494.01.T01:CDS
GATTCTGGACTAATATCAGA+TGG 0.557858 1:+6911487 None:intergenic
ATTTGTTAAACTATTTAACT+GGG 0.558747 1:-6914209 MsG0180000494.01.T01:CDS
TGGAGCCGAGTTAAATACAT+TGG 0.560300 1:+6914933 None:intergenic
ATCAGTTTACTGTTAAAGAG+TGG 0.561460 1:-6913021 MsG0180000494.01.T01:CDS
TTGGAGGAGGTGCTTTCTCA+GGG 0.561855 1:-6912058 MsG0180000494.01.T01:CDS
TTCAATAGATTATCGAAATG+TGG 0.567333 1:-6910846 MsG0180000494.01.T01:CDS
AAAAGTTAAAATGAGATCCA+AGG 0.569022 1:+6910500 None:intergenic
GTCAGGACTATGTAAAGGCA+TGG 0.569704 1:-6912749 MsG0180000494.01.T01:CDS
AAGCCGGGATTTCCTCCTTG+TGG 0.571221 1:-6914184 MsG0180000494.01.T01:CDS
GTTTGAATTTGAAGGCCTGA+TGG 0.572545 1:+6911631 None:intergenic
GGAAAATATGTATAAATGTG+AGG 0.576041 1:-6912990 MsG0180000494.01.T01:CDS
AACAGCACAAACAGGCTCAT+CGG 0.576494 1:+6915708 None:intergenic
TATATCCCATCATCGGAAAG+AGG 0.580213 1:-6910570 MsG0180000494.01.T01:three_prime_UTR
CTCCAGCTTCACTCATGTAA+GGG 0.583020 1:+6912335 None:intergenic
AGAAGACTCGTAATCATAGC+CGG 0.583786 1:+6911150 None:intergenic
GGCTTGCAGTAGAGGTTGTG+AGG 0.586486 1:-6911212 MsG0180000494.01.T01:CDS
GGCTTGCAGTAGAGATTGTG+AGG 0.586486 1:-6911365 MsG0180000494.01.T01:CDS
TCTTGACTAATATTATCAGA+TGG 0.589574 1:+6911337 None:intergenic
CAGGTGTCAGGACTATGTAA+AGG 0.591503 1:-6912754 MsG0180000494.01.T01:CDS
CTGGAAGTACCGTAACCACT+AGG 0.593348 1:+6914838 None:intergenic
AAGAACACCGGGCATTGGGG+AGG 0.596034 1:+6915735 None:intergenic
TTGTAATCGGTGGTGTATCG+TGG 0.596551 1:-6915897 MsG0180000494.01.T01:CDS
AATTCTGGACTAATATCAGA+TGG 0.597678 1:+6911184 None:intergenic
CTCATCGGAGTTAAGAACAC+CGG 0.597915 1:+6915723 None:intergenic
CCACAATTCAAGAGTCCACA+AGG 0.598367 1:+6914169 None:intergenic
AATATCGAACGCCTTTACAA+CGG 0.598805 1:+6915656 None:intergenic
GTATAGGATTGATGACTCAA+AGG 0.599011 1:-6912203 MsG0180000494.01.T01:intron
GGATTGCAATAGAGATTGTG+AGG 0.599183 1:-6911515 MsG0180000494.01.T01:CDS
GCTACTCCACATGAAGATGC+TGG 0.600337 1:-6910725 MsG0180000494.01.T01:CDS
TTTAAGGCTTCTGCTGCTGG+GGG 0.600788 1:-6914889 MsG0180000494.01.T01:CDS
TGTTGTACATGCAGAGTGGG+AGG 0.601756 1:-6912408 MsG0180000494.01.T01:intron
TTGTCTCCTGAAGGTTAGAA+GGG 0.606448 1:+6913513 None:intergenic
GAAGTCGACGCTAATTTCGA+AGG 0.607230 1:-6915781 MsG0180000494.01.T01:CDS
ACAATCTCTATTGCAATCCA+AGG 0.607278 1:+6911519 None:intergenic
CCAAGGCCTTCACATTTGAG+AGG 0.608436 1:+6911536 None:intergenic
ACTCTCAAATGTGAAGGTGT+TGG 0.608500 1:-6911386 MsG0180000494.01.T01:CDS
TCATTTGGTAAACCTGGAGA+AGG 0.610432 1:+6910899 None:intergenic
TCATCGGAGTTAAGAACACC+GGG 0.610855 1:+6915724 None:intergenic
GGATAATGGTTGTCTCCTGA+AGG 0.611966 1:+6913504 None:intergenic
AAGATGATACTGGTGTGGCT+GGG 0.612233 1:-6910928 MsG0180000494.01.T01:CDS
AGGATGCTCACGAGTTCATG+AGG 0.612750 1:-6913725 MsG0180000494.01.T01:intron
TGAATGCCTCTCAAATGTGA+AGG 0.612775 1:-6911542 MsG0180000494.01.T01:CDS
TGTTAAAGAGTGGCTTGATG+GGG 0.613216 1:-6913011 MsG0180000494.01.T01:CDS
GACTTCGAAGTATTTAGAAG+CGG 0.613603 1:+6915798 None:intergenic
GTGGCCCTTCTCCAACAAGT+AGG 0.614253 1:+6913986 None:intergenic
GTTAAGAACACCGGGCATTG+GGG 0.614434 1:+6915732 None:intergenic
AGCTAAAAGAGAGCAGTCTG+AGG 0.617289 1:-6911413 MsG0180000494.01.T01:CDS
TGTAATCGGTGGTGTATCGT+GGG 0.618092 1:-6915896 MsG0180000494.01.T01:CDS
TCCAACAAGTAGGCAACAAG+CGG 0.618914 1:+6913996 None:intergenic
AATAGATTATCGAAATGTGG+AGG 0.625891 1:-6910843 MsG0180000494.01.T01:CDS
TTTAGGTTATGGAAGACAAG+AGG 0.626868 1:-6913745 MsG0180000494.01.T01:CDS
AAGATTTAAAGTCTCAGGGA+AGG 0.629675 1:+6912360 None:intergenic
ATTTAACTCGGCTCCAAATG+GGG 0.631267 1:-6914926 MsG0180000494.01.T01:CDS
TCCAATAGCGATTACAAGAG+CGG 0.633349 1:+6915843 None:intergenic
TCTCGTTTGCCTAATATCGG+TGG 0.635704 1:-6913771 MsG0180000494.01.T01:CDS
ACGTAGATGCTTGTAATCGG+TGG 0.640137 1:-6915907 MsG0180000494.01.T01:exon
GGACACACTCTCAAATGTGA+AGG 0.640467 1:-6911239 MsG0180000494.01.T01:CDS
TTCGGAATTCAATGGAATGG+AGG 0.641913 1:+6911282 None:intergenic
TTGATTGCACTGGTACCTAG+TGG 0.650467 1:-6914853 MsG0180000494.01.T01:CDS
TAAGAAAGTGGAAATATCAG+CGG 0.652441 1:-6910645 MsG0180000494.01.T01:CDS
GGACACACTCTCAAATGTGA+AGG 0.654382 1:-6911392 MsG0180000494.01.T01:CDS
ATGAAGGGCAATAAGGACCA+AGG 0.661081 1:+6910430 None:intergenic
AAAATATGTATAAATGTGAG+GGG 0.663025 1:-6912988 MsG0180000494.01.T01:intron
AGAGTACCAGCATCTTCATG+TGG 0.664519 1:+6910719 None:intergenic
ATCCCATCATCGGAAAGAGG+TGG 0.672394 1:-6910567 MsG0180000494.01.T01:three_prime_UTR
TGTGGGATAGGAAGCAACAC+CGG 0.677681 1:+6910691 None:intergenic
TGCTACATCAAGGATTTCAG+GGG 0.678694 1:-6912232 MsG0180000494.01.T01:CDS
AGCTAAACGAGAGCAGTCTG+CGG 0.683742 1:-6911260 MsG0180000494.01.T01:CDS
AGATTTGGAAGATACAGATG+CGG 0.692292 1:-6910819 MsG0180000494.01.T01:CDS
AGATCAAGATGATACTGGTG+TGG 0.712390 1:-6910933 MsG0180000494.01.T01:CDS
GAATGTAAAAGAGCGAACAG+TGG 0.713953 1:-6911593 MsG0180000494.01.T01:CDS
TATCCCACAGAAAAGGACAG+AGG 0.718301 1:-6910677 MsG0180000494.01.T01:CDS
CAATTCAAGAGTCCACAAGG+AGG 0.738078 1:+6914172 None:intergenic
ATCTAGACATTCCTCCAACG+AGG 0.743248 1:+6913042 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTTTTAAAATATTTTTTT+AGG - Chr1:6912775-6912794 MsG0180000494.01.T01:intron 0.0%
!! TAATAATGATGAAATAAAAA+GGG + Chr1:6910998-6911017 None:intergenic 10.0%
!! TTAATAATGATGAAATAAAA+AGG + Chr1:6910999-6911018 None:intergenic 10.0%
!!! AAATCTAAAATTTATATCTT+AGG + Chr1:6913149-6913168 None:intergenic 10.0%
!!! TTATAATAACTATTTTTGTT+TGG - Chr1:6913489-6913508 MsG0180000494.01.T01:CDS 10.0%
!! AAAATAGTAAAAAGTTTCAT+TGG + Chr1:6914203-6914222 None:intergenic 15.0%
!! AAATAGTAAAAAGTTTCATT+GGG + Chr1:6914202-6914221 None:intergenic 15.0%
!! ACAATAATAATGATGAATTA+AGG + Chr1:6911195-6911214 None:intergenic 15.0%
!! CAATAATAATGATGAATTAA+GGG + Chr1:6911194-6911213 None:intergenic 15.0%
!! TAAAAGAAAATTACATCTTT+AGG + Chr1:6911571-6911590 None:intergenic 15.0%
!! TTAAATAGAGAAAGAAAAAA+AGG - Chr1:6910932-6910951 MsG0180000494.01.T01:CDS 15.0%
!! TTAAGAAATTACATTCATTT+CGG + Chr1:6912409-6912428 None:intergenic 15.0%
!! TTACATCTATAATAAAATAG+AGG - Chr1:6912987-6913006 MsG0180000494.01.T01:intron 15.0%
!! TTATTATTGTGAAACTAAAT+AGG - Chr1:6913224-6913243 MsG0180000494.01.T01:intron 15.0%
!! TTCGTAAAAAACTAAATTAT+TGG - Chr1:6911806-6911825 MsG0180000494.01.T01:intron 15.0%
!!! AATTTGTTAAACTATTTAAC+TGG - Chr1:6912160-6912179 MsG0180000494.01.T01:intron 15.0%
!!! ATTTGTTAAACTATTTAACT+GGG - Chr1:6912161-6912180 MsG0180000494.01.T01:intron 15.0%
!!! ATTTTCTCATGTTTTTTTTT+TGG - Chr1:6913937-6913956 MsG0180000494.01.T01:intron 15.0%
!!! CTTTTTACTATTTTTCTTTT+TGG - Chr1:6914209-6914228 MsG0180000494.01.T01:CDS 15.0%
!!! CTTTTTAGTTATACAATAAA+CGG - Chr1:6913419-6913438 MsG0180000494.01.T01:intron 15.0%
!!! GATTTAATTTATCATTATTG+TGG - Chr1:6910841-6910860 MsG0180000494.01.T01:CDS 15.0%
!!! TTAACTTCTTTTTTTCATAA+TGG - Chr1:6912430-6912449 MsG0180000494.01.T01:intron 15.0%
!!! TTGTCTATATTTTGTTTATA+GGG - Chr1:6912060-6912079 MsG0180000494.01.T01:CDS 15.0%
!!! TTTGTCTATATTTTGTTTAT+AGG - Chr1:6912059-6912078 MsG0180000494.01.T01:CDS 15.0%
!!! TTTTCTCATGTTTTTTTTTT+GGG - Chr1:6913938-6913957 MsG0180000494.01.T01:intron 15.0%
!! AAAAAATGCAAAAGTAATAG+CGG - Chr1:6911412-6911431 MsG0180000494.01.T01:CDS 20.0%
!! AAAATATGTATAAATGTGAG+GGG - Chr1:6913382-6913401 MsG0180000494.01.T01:intron 20.0%
!! AAGCATTTAACATATCAATA+TGG + Chr1:6914098-6914117 None:intergenic 20.0%
!! AATTATCTGAGCAAATTATT+AGG + Chr1:6914445-6914464 None:intergenic 20.0%
!! AGTTTAACAAATTCATCATA+AGG + Chr1:6912153-6912172 None:intergenic 20.0%
!! ATTGCATAGAAATCAAATAT+TGG + Chr1:6913106-6913125 None:intergenic 20.0%
!! CGTTTATTGTATAACTAAAA+AGG + Chr1:6913421-6913440 None:intergenic 20.0%
!! GAAAATATGTATAAATGTGA+GGG - Chr1:6913381-6913400 MsG0180000494.01.T01:intron 20.0%
!! GTTATGTGTTTGTAATAATT+AGG - Chr1:6911255-6911274 MsG0180000494.01.T01:CDS 20.0%
!! GTTTGTAATAATTAGGAATT+AGG - Chr1:6911262-6911281 MsG0180000494.01.T01:CDS 20.0%
!! TAACTTCTTAAGTTAAATGT+GGG + Chr1:6913069-6913088 None:intergenic 20.0%
!! TAATATTAGTCAAGAATTGA+AGG - Chr1:6915041-6915060 MsG0180000494.01.T01:intron 20.0%
!! TATAATAAAATAGAGGCTAA+AGG - Chr1:6912994-6913013 MsG0180000494.01.T01:CDS 20.0%
!! TGTTTATTAATTGAATGTAG+AGG - Chr1:6913444-6913463 MsG0180000494.01.T01:intron 20.0%
!! TTCTAAGTGCTAAAATTTAA+AGG + Chr1:6914519-6914538 None:intergenic 20.0%
!!! AAATCAAAAAAGTGTCATTA+TGG + Chr1:6910826-6910845 None:intergenic 20.0%
!!! AAGCACAATATTTGTAATTT+TGG + Chr1:6912116-6912135 None:intergenic 20.0%
!!! ACTAGTTGTTTTGATTTTTT+TGG - Chr1:6911233-6911252 MsG0180000494.01.T01:CDS 20.0%
!!! ATGATTATGATTAGTTGTTT+TGG - Chr1:6910869-6910888 MsG0180000494.01.T01:CDS 20.0%
!!! ATGTTAAATGCTTCATTTTT+TGG - Chr1:6914105-6914124 MsG0180000494.01.T01:intron 20.0%
!!! GTTGTTTTGTTTTGTTTATT+TGG - Chr1:6911051-6911070 MsG0180000494.01.T01:CDS 20.0%
!!! TAAAATTAACAGTTTGTTGT+TGG - Chr1:6912940-6912959 MsG0180000494.01.T01:intron 20.0%
!!! TAAACCAAAGAAAATTTTGA+GGG + Chr1:6914370-6914389 None:intergenic 20.0%
!!! TTTAAGATCTGAATTTAGTT+TGG - Chr1:6911320-6911339 MsG0180000494.01.T01:CDS 20.0%
! AAAAACTGAATATATCACGT+TGG + Chr1:6914409-6914428 None:intergenic 25.0%
! AAAAGTTAAAATGAGATCCA+AGG + Chr1:6915873-6915892 None:intergenic 25.0%
! AAACGAGATAGAATATTCAT+TGG + Chr1:6912587-6912606 None:intergenic 25.0%
! AAGGCAATTGTAAGAATATT+TGG + Chr1:6913671-6913690 None:intergenic 25.0%
! ACATAGAAACTTGAAACTTA+AGG - Chr1:6913891-6913910 MsG0180000494.01.T01:intron 25.0%
! AGAAATCAAATATTGGCAAT+TGG + Chr1:6913099-6913118 None:intergenic 25.0%
! AGATCATCCAAAACTAAATA+TGG + Chr1:6912747-6912766 None:intergenic 25.0%
! ATCCACTACAAAAATTGAAA+TGG + Chr1:6912692-6912711 None:intergenic 25.0%
! CATATATGCTGTTGTATAAA+AGG - Chr1:6914337-6914356 MsG0180000494.01.T01:intron 25.0%
! CATTATTAACTGAGATATGA+GGG - Chr1:6912274-6912293 MsG0180000494.01.T01:CDS 25.0%
! CTAACTTCTTAAGTTAAATG+TGG + Chr1:6913070-6913089 None:intergenic 25.0%
! GAAATCAAATATTGGCAATT+GGG + Chr1:6913098-6913117 None:intergenic 25.0%
! GGAAAATATGTATAAATGTG+AGG - Chr1:6913380-6913399 MsG0180000494.01.T01:intron 25.0%
! TAAGTTATTCAAATAACCAG+AGG + Chr1:6914564-6914583 None:intergenic 25.0%
! TATCATTTATATCCCATCAT+CGG - Chr1:6915793-6915812 MsG0180000494.01.T01:CDS 25.0%
! TCATTATTAACTGAGATATG+AGG - Chr1:6912273-6912292 MsG0180000494.01.T01:CDS 25.0%
! TCCAAAACTAAATATGGAAT+AGG + Chr1:6912741-6912760 None:intergenic 25.0%
! TCCAAGAAAGAAAAATCATT+TGG + Chr1:6915489-6915508 None:intergenic 25.0%
! TCTTGACTAATATTATCAGA+TGG + Chr1:6915036-6915055 None:intergenic 25.0%
! TGAATAACTTACAGTTTATC+TGG - Chr1:6914573-6914592 MsG0180000494.01.T01:intron 25.0%
! TGATTTCTATGCAATCTTTA+TGG - Chr1:6913111-6913130 MsG0180000494.01.T01:CDS 25.0%
! TGTTTAAGAGAAAGCAAAAA+AGG - Chr1:6911122-6911141 MsG0180000494.01.T01:CDS 25.0%
! TTATAGGGTTAAATCTTGTA+TGG - Chr1:6912075-6912094 MsG0180000494.01.T01:CDS 25.0%
! TTCAATAGATTATCGAAATG+TGG - Chr1:6915524-6915543 MsG0180000494.01.T01:intron 25.0%
!! AAATCAGTATGAAAGTATGA+TGG - Chr1:6913275-6913294 MsG0180000494.01.T01:intron 25.0%
!! ACCAAATGATTTTTCTTTCT+TGG - Chr1:6915485-6915504 MsG0180000494.01.T01:intron 25.0%
!! CAACGATTTTTAAATATACC+AGG + Chr1:6910795-6910814 None:intergenic 25.0%
!! GTAAACCAAAGAAAATTTTG+AGG + Chr1:6914371-6914390 None:intergenic 25.0%
!! TACCATTTCAATTTTTGTAG+TGG - Chr1:6912687-6912706 MsG0180000494.01.T01:intron 25.0%
!! TTACAAATATTGTGCTTTTC+AGG - Chr1:6912119-6912138 MsG0180000494.01.T01:intron 25.0%
!!! AGTTGGGAAATTTTTTTTCT+GGG - Chr1:6915828-6915847 MsG0180000494.01.T01:CDS 25.0%
!!! CTCATTTTAACTTTTCTAGA+TGG - Chr1:6915878-6915897 MsG0180000494.01.T01:CDS 25.0%
!!! TTAGTTGTTTTGATTGTGTT+AGG - Chr1:6910963-6910982 MsG0180000494.01.T01:CDS 25.0%
!!! TTTTTGTTGTGTTAGAATAC+TGG - Chr1:6911160-6911179 MsG0180000494.01.T01:CDS 25.0%
AAATAAATTCCACCACTCAA+AGG + Chr1:6913516-6913535 None:intergenic 30.0%
AAATATAGACAAAGTCACCA+AGG + Chr1:6912052-6912071 None:intergenic 30.0%
AAGATTAAGACAGAAGCAAA+TGG + Chr1:6913198-6913217 None:intergenic 30.0%
AATAGATTATCGAAATGTGG+AGG - Chr1:6915527-6915546 MsG0180000494.01.T01:intron 30.0%
AATGATAGAGCATAATTCCT+TGG - Chr1:6915923-6915942 MsG0180000494.01.T01:exon 30.0%
AATTCTGGACTAATATCAGA+TGG + Chr1:6915189-6915208 None:intergenic 30.0%
ACCAAAAATGTGTTGGATAA+TGG + Chr1:6912883-6912902 None:intergenic 30.0%
AGAAATTACATTCATTTCGG+TGG + Chr1:6912406-6912425 None:intergenic 30.0%
AGATTTGATTGATGTGGATA+TGG - Chr1:6915380-6915399 MsG0180000494.01.T01:intron 30.0%
AGCGGATAAGTTAATAATGT+AGG - Chr1:6915743-6915762 MsG0180000494.01.T01:CDS 30.0%
AGGAAATGGAATTAAGAAAG+TGG - Chr1:6915713-6915732 MsG0180000494.01.T01:CDS 30.0%
ATCAGTTTACTGTTAAAGAG+TGG - Chr1:6913349-6913368 MsG0180000494.01.T01:intron 30.0%
ATCTTCAACAACATGAGAAA+TGG + Chr1:6915364-6915383 None:intergenic 30.0%
ATGGTTACGATATTTGATGT+TGG - Chr1:6914610-6914629 MsG0180000494.01.T01:intron 30.0%
ATTATGATTAGATTCAGTCC+TGG - Chr1:6910774-6910793 MsG0180000494.01.T01:CDS 30.0%
ATTCGGTAGTTTGAATTTGA+AGG + Chr1:6914750-6914769 None:intergenic 30.0%
CAGCATAACATGTTAAAAGA+CGG + Chr1:6913588-6913607 None:intergenic 30.0%
GAAAAATCATTTGGTAAACC+TGG + Chr1:6915480-6915499 None:intergenic 30.0%
GATTTGATTGATGTGGATAT+GGG - Chr1:6915381-6915400 MsG0180000494.01.T01:intron 30.0%
TAAGAAAGTGGAAATATCAG+CGG - Chr1:6915725-6915744 MsG0180000494.01.T01:CDS 30.0%
TACGTTGAATTGTGATTCTA+GGG + Chr1:6910448-6910467 None:intergenic 30.0%
TAGAACATATTACTCTTACC+TGG + Chr1:6913703-6913722 None:intergenic 30.0%
TCTGGTGTTTGTTTAAAGAA+TGG - Chr1:6914591-6914610 MsG0180000494.01.T01:intron 30.0%
TCTTCAACAACATGAGAAAT+GGG + Chr1:6915363-6915382 None:intergenic 30.0%
TGATATTAGTCCAGAATCAA+AGG - Chr1:6914888-6914907 MsG0180000494.01.T01:CDS 30.0%
TGATATTAGTCCAGAATTGA+AGG - Chr1:6915191-6915210 MsG0180000494.01.T01:intron 30.0%
TGGTTACGATATTTGATGTT+GGG - Chr1:6914611-6914630 MsG0180000494.01.T01:intron 30.0%
TGTTGAAGATTTGATTGATG+TGG - Chr1:6915374-6915393 MsG0180000494.01.T01:intron 30.0%
TTCTTAAGTTAAATGTGGGA+AGG + Chr1:6913065-6913084 None:intergenic 30.0%
TTTCAGGCATTTGTAATGAT+TGG - Chr1:6912498-6912517 MsG0180000494.01.T01:intron 30.0%
! ACCATTATCCAACACATTTT+TGG - Chr1:6912879-6912898 MsG0180000494.01.T01:intron 30.0%
! CTGATTGTTGATTAGGAATT+AGG - Chr1:6911078-6911097 MsG0180000494.01.T01:CDS 30.0%
! TGGTTAACTGATTGTTGATT+AGG - Chr1:6911071-6911090 MsG0180000494.01.T01:CDS 30.0%
! TTTTACATTCCCTGAAGATT+CGG + Chr1:6914767-6914786 None:intergenic 30.0%
! TTTTAGTATCCTCATTTGTG+TGG - Chr1:6914259-6914278 MsG0180000494.01.T01:intron 30.0%
!! ATTAACAGTTTGTTGTTGGA+AGG - Chr1:6912944-6912963 MsG0180000494.01.T01:intron 30.0%
!! ATTATCCAACACATTTTTGG+TGG - Chr1:6912882-6912901 MsG0180000494.01.T01:intron 30.0%
!! GCCTATTCCATATTTAGTTT+TGG - Chr1:6912737-6912756 MsG0180000494.01.T01:CDS 30.0%
!! TTTTGATTGTGTTAGGATAC+TGG - Chr1:6910970-6910989 MsG0180000494.01.T01:CDS 30.0%
!!! GAGTTGGGAAATTTTTTTTC+TGG - Chr1:6915827-6915846 MsG0180000494.01.T01:CDS 30.0%
!!! GTTGGGAAATTTTTTTTCTG+GGG - Chr1:6915829-6915848 MsG0180000494.01.T01:CDS 30.0%
!!! TGTAATTCTTGTTTTGATCC+TGG - Chr1:6914699-6914718 MsG0180000494.01.T01:intron 30.0%
!!! TTTGCATTTTTTCTTATGCC+CGG + Chr1:6911404-6911423 None:intergenic 30.0%
AAAGTCATGTTGAAAGAGCA+AGG - Chr1:6912540-6912559 MsG0180000494.01.T01:intron 35.0%
AACTTTCTAATCATGCTGCT+TGG + Chr1:6911883-6911902 None:intergenic 35.0%
AATAACCAGAGGTCTCAAAT+AGG + Chr1:6914553-6914572 None:intergenic 35.0%
AATATCGAACGCCTTTACAA+CGG + Chr1:6910717-6910736 None:intergenic 35.0%
AATGTAATGCCACACAAATG+AGG + Chr1:6914271-6914290 None:intergenic 35.0%
AATTGCCTTGAAAAGATTCC+AGG - Chr1:6913682-6913701 MsG0180000494.01.T01:intron 35.0%
ACAATCTCTATTGCAATCCA+AGG + Chr1:6914854-6914873 None:intergenic 35.0%
ACATCTTTAGGCTTCTTGAT+AGG + Chr1:6911559-6911578 None:intergenic 35.0%
ACTCTCAAATGTGAAGGATT+TGG - Chr1:6915137-6915156 MsG0180000494.01.T01:intron 35.0%
AGAGCAAATGCAGTATGTAT+TGG + Chr1:6914494-6914513 None:intergenic 35.0%
AGATTTGGAAGATACAGATG+CGG - Chr1:6915551-6915570 MsG0180000494.01.T01:intron 35.0%
AGCTTCTGAGTTCAATTCAA+TGG + Chr1:6914941-6914960 None:intergenic 35.0%
ATATCACATGAAGCACAAAG+GGG + Chr1:6913796-6913815 None:intergenic 35.0%
ATGTATAAATGTGAGGGGTA+AGG - Chr1:6913387-6913406 MsG0180000494.01.T01:intron 35.0%
ATGTTCTCCAGGGTTATTAA+AGG - Chr1:6913019-6913038 MsG0180000494.01.T01:CDS 35.0%
ATTAAGACAGAAGCAAATGG+TGG + Chr1:6913195-6913214 None:intergenic 35.0%
ATTCAAACTACCGAATCTTC+AGG - Chr1:6914754-6914773 MsG0180000494.01.T01:intron 35.0%
CAAGAATTGAAGGTTTCTTC+TGG - Chr1:6915051-6915070 MsG0180000494.01.T01:intron 35.0%
CATATCACATGAAGCACAAA+GGG + Chr1:6913797-6913816 None:intergenic 35.0%
CTAAAGTTCGATCATGAGAA+GGG + Chr1:6912238-6912257 None:intergenic 35.0%
CTACGTTGAATTGTGATTCT+AGG + Chr1:6910449-6910468 None:intergenic 35.0%
CTATCTCGTTTGCCTAATAT+CGG - Chr1:6912596-6912615 MsG0180000494.01.T01:intron 35.0%
GACTTGACAGTTGAAATTCA+TGG - Chr1:6913297-6913316 MsG0180000494.01.T01:intron 35.0%
GATGTTGAGTCAACTGATAA+TGG - Chr1:6915294-6915313 MsG0180000494.01.T01:intron 35.0%
GATTCTGGACTAATATCAGA+TGG + Chr1:6914886-6914905 None:intergenic 35.0%
GGATTGTACATTAACTGTCT+GGG - Chr1:6912708-6912727 MsG0180000494.01.T01:CDS 35.0%
TAAAACATCTTAGCACCTCA+AGG + Chr1:6911656-6911675 None:intergenic 35.0%
TAACATGTTATGCTGCTGTT+TGG - Chr1:6913593-6913612 MsG0180000494.01.T01:intron 35.0%
TATTTAACTCGGCTCCAAAT+GGG - Chr1:6911443-6911462 MsG0180000494.01.T01:CDS 35.0%
TCAACGTAGATGCTTGTAAT+CGG - Chr1:6910460-6910479 MsG0180000494.01.T01:three_prime_UTR 35.0%
TCAAGTTTCTATGTGTTTGC+AGG + Chr1:6913885-6913904 None:intergenic 35.0%
TCATATCACATGAAGCACAA+AGG + Chr1:6913798-6913817 None:intergenic 35.0%
TCATTACATCTGCTACATCA+AGG - Chr1:6914128-6914147 MsG0180000494.01.T01:intron 35.0%
TCTGTTTGCCTTGATGAATT+TGG - Chr1:6912819-6912838 MsG0180000494.01.T01:intron 35.0%
TGAATATATCACGTTGGCAA+GGG + Chr1:6914403-6914422 None:intergenic 35.0%
TGGATTGTACATTAACTGTC+TGG - Chr1:6912707-6912726 MsG0180000494.01.T01:CDS 35.0%
TGTGTGGCATTACATTTCTA+AGG - Chr1:6914275-6914294 MsG0180000494.01.T01:intron 35.0%
TGTTCTCCAGGGTTATTAAA+GGG - Chr1:6913020-6913039 MsG0180000494.01.T01:CDS 35.0%
TTCAAACTACCGAATCTTCA+GGG - Chr1:6914755-6914774 MsG0180000494.01.T01:intron 35.0%
TTGTGTTAGAATACTGGTAG+TGG - Chr1:6911166-6911185 MsG0180000494.01.T01:CDS 35.0%
TTTCTCCACCAAATTCATCA+AGG + Chr1:6912830-6912849 None:intergenic 35.0%
! AAGATTTAAAGTCTCAGGGA+AGG + Chr1:6914013-6914032 None:intergenic 35.0%
! ACTTTCTAATCATGCTGCTT+GGG + Chr1:6911882-6911901 None:intergenic 35.0%
! AGTTAGATGACTGAGCTTTT+TGG - Chr1:6911899-6911918 MsG0180000494.01.T01:intron 35.0%
! CCTTCCCTCAAAATTTTCTT+TGG - Chr1:6914363-6914382 MsG0180000494.01.T01:intron 35.0%
! CTAGTGCTTATGTTTGTTGA+CGG - Chr1:6912470-6912489 MsG0180000494.01.T01:intron 35.0%
! GACTTCGAAGTATTTAGAAG+CGG + Chr1:6910575-6910594 None:intergenic 35.0%
! GGCTAAGATTTAAAGTCTCA+GGG + Chr1:6914017-6914036 None:intergenic 35.0%
! GTATAGGATTGATGACTCAA+AGG - Chr1:6914167-6914186 MsG0180000494.01.T01:CDS 35.0%
! TCTTACCTGGAATCTTTTCA+AGG + Chr1:6913690-6913709 None:intergenic 35.0%
! TTATTATCCCTTGTTGTCGA+AGG - Chr1:6911620-6911639 MsG0180000494.01.T01:CDS 35.0%
! TTTAGGTTATGGAAGACAAG+AGG - Chr1:6912625-6912644 MsG0180000494.01.T01:intron 35.0%
!! CCAAAGAAAATTTTGAGGGA+AGG + Chr1:6914366-6914385 None:intergenic 35.0%
!! TCTGGGGTTTCTTAATTTGT+GGG - Chr1:6915845-6915864 MsG0180000494.01.T01:CDS 35.0%
!! TGTTTGTTGTCAGATGCTTT+AGG - Chr1:6913728-6913747 MsG0180000494.01.T01:CDS 35.0%
!! TTCTGGGGTTTCTTAATTTG+TGG - Chr1:6915844-6915863 MsG0180000494.01.T01:CDS 35.0%
!! TTCTTAATTTGTGGGAACCT+TGG - Chr1:6915853-6915872 MsG0180000494.01.T01:CDS 35.0%
!! TTGTAGTTGTTTTGCGAATG+TGG - Chr1:6912325-6912344 MsG0180000494.01.T01:CDS 35.0%
!! TTTTTGTTTGGACCTTTGAG+TGG - Chr1:6913501-6913520 MsG0180000494.01.T01:CDS 35.0%
!!! TTTGTTGACGGTGTTTTTTC+AGG - Chr1:6912482-6912501 MsG0180000494.01.T01:intron 35.0%
ACAGAAAAGGACAGAGGAAA+TGG - Chr1:6915699-6915718 MsG0180000494.01.T01:CDS 40.0%
ACTATTTAACTGGGACAAGC+CGG - Chr1:6912170-6912189 MsG0180000494.01.T01:intron 40.0%
ACTGTTAAAGAGTGGCTTGA+TGG - Chr1:6913357-6913376 MsG0180000494.01.T01:intron 40.0%
AGAAGACTCGTAATCATAGC+CGG + Chr1:6915223-6915242 None:intergenic 40.0%
AGACCTATAGAAGAGACTTC+AGG - Chr1:6915405-6915424 MsG0180000494.01.T01:intron 40.0%
AGATCAAGATGATACTGGTG+TGG - Chr1:6915437-6915456 MsG0180000494.01.T01:intron 40.0%
AGCTTCGGAATTCAATGGAA+TGG + Chr1:6915094-6915113 None:intergenic 40.0%
AGGATCGAATTTGATTGCAC+TGG - Chr1:6911507-6911526 MsG0180000494.01.T01:CDS 40.0%
ATATCGAACGCCTTTACAAC+GGG + Chr1:6910716-6910735 None:intergenic 40.0%
ATGAGGTTTCTGACCCTTTA+TGG - Chr1:6912019-6912038 MsG0180000494.01.T01:intron 40.0%
ATTTAACTCGGCTCCAAATG+GGG - Chr1:6911444-6911463 MsG0180000494.01.T01:CDS 40.0%
ATTTCAGGGGAAACTGGTAT+AGG - Chr1:6914151-6914170 MsG0180000494.01.T01:intron 40.0%
CCAATTCCCTTTAATAACCC+TGG + Chr1:6913029-6913048 None:intergenic 40.0%
CCAGAAGAAACCTTTGATTC+TGG + Chr1:6914901-6914920 None:intergenic 40.0%
CCAGAATCAAAGGTTTCTTC+TGG - Chr1:6914898-6914917 MsG0180000494.01.T01:CDS 40.0%
CCAGAATTGAAGGTTTCATC+CGG - Chr1:6915201-6915220 MsG0180000494.01.T01:intron 40.0%
CCAGGGTTATTAAAGGGAAT+TGG - Chr1:6913026-6913045 MsG0180000494.01.T01:CDS 40.0%
CCTAATATCGGTGGTACTTT+AGG - Chr1:6912608-6912627 MsG0180000494.01.T01:intron 40.0%
CTGAATATATCACGTTGGCA+AGG + Chr1:6914404-6914423 None:intergenic 40.0%
CTGCTACATCAAGGATTTCA+GGG - Chr1:6914137-6914156 MsG0180000494.01.T01:intron 40.0%
CTGTTAAAGAGTGGCTTGAT+GGG - Chr1:6913358-6913377 MsG0180000494.01.T01:intron 40.0%
GAATATATCACGTTGGCAAG+GGG + Chr1:6914402-6914421 None:intergenic 40.0%
GAATGTAAAAGAGCGAACAG+TGG - Chr1:6914777-6914796 MsG0180000494.01.T01:intron 40.0%
GACGATGCATATTATGGCAA+TGG - Chr1:6915600-6915619 MsG0180000494.01.T01:intron 40.0%
GACTCTTGAATTGTGGAAAC+AGG - Chr1:6912208-6912227 MsG0180000494.01.T01:CDS 40.0%
GAGCGGTGAATATGAATTGA+AGG + Chr1:6910513-6910532 None:intergenic 40.0%
GATGTCTAACCTCAGATTGA+AGG + Chr1:6912911-6912930 None:intergenic 40.0%
GCCAATTACTCTGAGTGAAA+TGG - Chr1:6914674-6914693 MsG0180000494.01.T01:intron 40.0%
GCCATTTCACTCAGAGTAAT+TGG + Chr1:6914678-6914697 None:intergenic 40.0%
GCTAAAGGTTATGTTCTCCA+GGG - Chr1:6913009-6913028 MsG0180000494.01.T01:CDS 40.0%
GCTAAAGTTCGATCATGAGA+AGG + Chr1:6912239-6912258 None:intergenic 40.0%
GCTAACGACGATGCATATTA+TGG - Chr1:6915594-6915613 MsG0180000494.01.T01:intron 40.0%
GGAAAACCTTGTCAGTTCAA+GGG + Chr1:6911969-6911988 None:intergenic 40.0%
GGATTGCAATAGAGATTGTG+AGG - Chr1:6914855-6914874 MsG0180000494.01.T01:CDS 40.0%
GGCAACTAATGGTGTGTTTA+AGG - Chr1:6911465-6911484 MsG0180000494.01.T01:CDS 40.0%
GTATTTAACTCGGCTCCAAA+TGG - Chr1:6911442-6911461 MsG0180000494.01.T01:CDS 40.0%
GTTTGAATTTGAAGGCCTGA+TGG + Chr1:6914742-6914761 None:intergenic 40.0%
GTTTGCCTTGATGAATTTGG+TGG - Chr1:6912822-6912841 MsG0180000494.01.T01:intron 40.0%
TAAGGTTGCTTGTGTGGAAT+TGG - Chr1:6914293-6914312 MsG0180000494.01.T01:intron 40.0%
TATATCCCATCATCGGAAAG+AGG - Chr1:6915800-6915819 MsG0180000494.01.T01:CDS 40.0%
TCACTTAAGTGTGTGCTCTT+TGG + Chr1:6911697-6911716 None:intergenic 40.0%
TCATTTGGTAAACCTGGAGA+AGG + Chr1:6915474-6915493 None:intergenic 40.0%
TCCAATAGCGATTACAAGAG+CGG + Chr1:6910530-6910549 None:intergenic 40.0%
TCGAAATGTGGAGGAAGATT+TGG - Chr1:6915536-6915555 MsG0180000494.01.T01:intron 40.0%
TCTGCTACATCAAGGATTTC+AGG - Chr1:6914136-6914155 MsG0180000494.01.T01:intron 40.0%
TGAATGCCTCTCAAATGTGA+AGG - Chr1:6914828-6914847 MsG0180000494.01.T01:CDS 40.0%
TGCTACATCAAGGATTTCAG+GGG - Chr1:6914138-6914157 MsG0180000494.01.T01:intron 40.0%
TGGAGCCGAGTTAAATACAT+TGG + Chr1:6911440-6911459 None:intergenic 40.0%
TGTTAAAGAGTGGCTTGATG+GGG - Chr1:6913359-6913378 MsG0180000494.01.T01:intron 40.0%
TTCGGAATTCAATGGAATGG+AGG + Chr1:6915091-6915110 None:intergenic 40.0%
TTGTCTCCTGAAGGTTAGAA+GGG + Chr1:6912860-6912879 None:intergenic 40.0%
! AACTGAGATATGAGGGTACA+TGG - Chr1:6912281-6912300 MsG0180000494.01.T01:CDS 40.0%
! ACTCTCAAATGTGAAGGTGT+TGG - Chr1:6914984-6915003 MsG0180000494.01.T01:CDS 40.0%
! ATCGGTGGTACTTTAGGTTA+TGG - Chr1:6912614-6912633 MsG0180000494.01.T01:intron 40.0%
! ATTTCCTCTGTCCTTTTCTG+TGG + Chr1:6915700-6915719 None:intergenic 40.0%
! CAGAAACCTCATGTTGGTTA+AGG + Chr1:6912011-6912030 None:intergenic 40.0%
! CCTAAAGTACCACCGATATT+AGG + Chr1:6912611-6912630 None:intergenic 40.0%
! CGGTGCCAATGTATTTAACT+CGG - Chr1:6911432-6911451 MsG0180000494.01.T01:CDS 40.0%
! CGTTTAGCTTCGGAATTCAA+TGG + Chr1:6915099-6915118 None:intergenic 40.0%
! CTTTCTAATCATGCTGCTTG+GGG + Chr1:6911881-6911900 None:intergenic 40.0%
! GATGCTGGTACTCTATTTTC+CGG - Chr1:6915660-6915679 MsG0180000494.01.T01:CDS 40.0%
! GGGCTAAGATTTAAAGTCTC+AGG + Chr1:6914018-6914037 None:intergenic 40.0%
! TTTCCTCTGTCCTTTTCTGT+GGG + Chr1:6915699-6915718 None:intergenic 40.0%
!! CATTTCTAAGGTTGCTTGTG+TGG - Chr1:6914287-6914306 MsG0180000494.01.T01:intron 40.0%
!! GTTGTAAAGGCGTTCGATAT+TGG - Chr1:6910716-6910735 MsG0180000494.01.T01:CDS 40.0%
!!! TTCTTGTTTTGATCCTGGAC+AGG - Chr1:6914704-6914723 MsG0180000494.01.T01:intron 40.0%
AAAAGAGCGAACAGTGGAAG+TGG - Chr1:6914783-6914802 MsG0180000494.01.T01:intron 45.0%
AAACCTTGTCAGTTCAAGGG+AGG + Chr1:6911966-6911985 None:intergenic 45.0%
AACAGCACAAACAGGCTCAT+CGG + Chr1:6910665-6910684 None:intergenic 45.0%
AACAGTCGCATTGGAATTCC+GGG - Chr1:6911383-6911402 MsG0180000494.01.T01:CDS 45.0%
AACCAGAGGTCTCAAATAGG+TGG + Chr1:6914550-6914569 None:intergenic 45.0%
AAGAGCAAGGCTAAGTTCAC+AGG - Chr1:6912553-6912572 MsG0180000494.01.T01:intron 45.0%
AAGATGATACTGGTGTGGCT+GGG - Chr1:6915442-6915461 MsG0180000494.01.T01:intron 45.0%
AAGGGTCAGAAACCTCATGT+TGG + Chr1:6912017-6912036 None:intergenic 45.0%
AATTTGAAGGCCTGATGGTC+GGG + Chr1:6914737-6914756 None:intergenic 45.0%
ACACCATTAGTTGCCCCATT+TGG + Chr1:6911460-6911479 None:intergenic 45.0%
ACCAAGGCAAGGAACCATAA+AGG + Chr1:6912036-6912055 None:intergenic 45.0%
ACCGCTCTTGTAATCGCTAT+TGG - Chr1:6910526-6910545 MsG0180000494.01.T01:three_prime_UTR 45.0%
ACGTAGATGCTTGTAATCGG+TGG - Chr1:6910463-6910482 MsG0180000494.01.T01:three_prime_UTR 45.0%
AGCTAAAAGAGAGCAGTCTG+AGG - Chr1:6914957-6914976 MsG0180000494.01.T01:CDS 45.0%
AGTTAAGAACACCGGGCATT+GGG + Chr1:6910642-6910661 None:intergenic 45.0%
ATCTAGACATTCCTCCAACG+AGG + Chr1:6913331-6913350 None:intergenic 45.0%
CAACAGTCGCATTGGAATTC+CGG - Chr1:6911382-6911401 MsG0180000494.01.T01:CDS 45.0%
CAATTCAAGAGTCCACAAGG+AGG + Chr1:6912201-6912220 None:intergenic 45.0%
CACTTCACCTTCGACAACAA+GGG + Chr1:6911630-6911649 None:intergenic 45.0%
CAGAATGTCAACAGTCGCAT+TGG - Chr1:6911374-6911393 MsG0180000494.01.T01:CDS 45.0%
CAGCCTGAAGTCTCTTCTAT+AGG + Chr1:6915411-6915430 None:intergenic 45.0%
CAGGTGTCAGGACTATGTAA+AGG - Chr1:6913616-6913635 MsG0180000494.01.T01:intron 45.0%
CCAAGGCAAGGAACCATAAA+GGG + Chr1:6912035-6912054 None:intergenic 45.0%
CCACAATTCAAGAGTCCACA+AGG + Chr1:6912204-6912223 None:intergenic 45.0%
CCGGATGAAACCTTCAATTC+TGG + Chr1:6915204-6915223 None:intergenic 45.0%
CCTTGTGGACTCTTGAATTG+TGG - Chr1:6912201-6912220 MsG0180000494.01.T01:intron 45.0%
CTATTTAACTGGGACAAGCC+GGG - Chr1:6912171-6912190 MsG0180000494.01.T01:intron 45.0%
CTCATCGGAGTTAAGAACAC+CGG + Chr1:6910650-6910669 None:intergenic 45.0%
CTCCAGCTTCACTCATGTAA+GGG + Chr1:6914038-6914057 None:intergenic 45.0%
CTGTTGACATTCTGTTGAGC+TGG + Chr1:6911368-6911387 None:intergenic 45.0%
CTTCATGTGGAGTAGCAGAT+TGG + Chr1:6915641-6915660 None:intergenic 45.0%
GAAGTCGACGCTAATTTCGA+AGG - Chr1:6910589-6910608 MsG0180000494.01.T01:three_prime_UTR 45.0%
GAATTTGAAGGCCTGATGGT+CGG + Chr1:6914738-6914757 None:intergenic 45.0%
GCGCAAGATCAAGATGATAC+TGG - Chr1:6915432-6915451 MsG0180000494.01.T01:intron 45.0%
GGACACACTCTCAAATGTGA+AGG - Chr1:6914978-6914997 MsG0180000494.01.T01:CDS 45.0%
GGATGTTGTACATGCAGAGT+GGG - Chr1:6913959-6913978 MsG0180000494.01.T01:intron 45.0%
GGCTAAAGGTTATGTTCTCC+AGG - Chr1:6913008-6913027 MsG0180000494.01.T01:CDS 45.0%
GGGAAAACCTTGTCAGTTCA+AGG + Chr1:6911970-6911989 None:intergenic 45.0%
GTCAGGACTATGTAAAGGCA+TGG - Chr1:6913621-6913640 MsG0180000494.01.T01:intron 45.0%
GTTGTCTCCTGAAGGTTAGA+AGG + Chr1:6912861-6912880 None:intergenic 45.0%
TACATGAGTGAAGCTGGAGA+TGG - Chr1:6914039-6914058 MsG0180000494.01.T01:CDS 45.0%
TAGACAAAGTCACCAAGGCA+AGG + Chr1:6912047-6912066 None:intergenic 45.0%
TATCCCACAGAAAAGGACAG+AGG - Chr1:6915693-6915712 MsG0180000494.01.T01:CDS 45.0%
TCAAGGATTTCAGGGGAAAC+TGG - Chr1:6914145-6914164 MsG0180000494.01.T01:intron 45.0%
TCATCGGAGTTAAGAACACC+GGG + Chr1:6910649-6910668 None:intergenic 45.0%
TCCAACAAGTAGGCAACAAG+CGG + Chr1:6912377-6912396 None:intergenic 45.0%
TCTCCAGCTTCACTCATGTA+AGG + Chr1:6914039-6914058 None:intergenic 45.0%
TCTCGTTTGCCTAATATCGG+TGG - Chr1:6912599-6912618 MsG0180000494.01.T01:intron 45.0%
TGCTTCCTATCCCACAGAAA+AGG - Chr1:6915686-6915705 MsG0180000494.01.T01:CDS 45.0%
TGTAATCGGTGGTGTATCGT+GGG - Chr1:6910474-6910493 MsG0180000494.01.T01:three_prime_UTR 45.0%
TTGTAATCGGTGGTGTATCG+TGG - Chr1:6910473-6910492 MsG0180000494.01.T01:three_prime_UTR 45.0%
TTGTTTGGACCTTTGAGTGG+TGG - Chr1:6913504-6913523 MsG0180000494.01.T01:CDS 45.0%
TTTAGGCTTCTTGATAGGCC+TGG + Chr1:6911554-6911573 None:intergenic 45.0%
TTTGGCTGTGTGTGTTGTGT+TGG - Chr1:6911338-6911357 MsG0180000494.01.T01:CDS 45.0%
! AGACTGCTCTCGTTTAGCTT+CGG + Chr1:6915109-6915128 None:intergenic 45.0%
! AGAGTACCAGCATCTTCATG+TGG + Chr1:6915654-6915673 None:intergenic 45.0%
! ATGTTATGCTGCTGTTTGGC+AGG - Chr1:6913597-6913616 MsG0180000494.01.T01:intron 45.0%
! GAACTGACAAGGTTTTCCCT+AGG - Chr1:6911971-6911990 MsG0180000494.01.T01:intron 45.0%
! GGATAATGGTTGTCTCCTGA+AGG + Chr1:6912869-6912888 None:intergenic 45.0%
! GTTGCCTACTTGTTGGAGAA+GGG - Chr1:6912380-6912399 MsG0180000494.01.T01:CDS 45.0%
! TCTGTCCTTTTCTGTGGGAT+AGG + Chr1:6915694-6915713 None:intergenic 45.0%
! TGTTGCCTACTTGTTGGAGA+AGG - Chr1:6912379-6912398 MsG0180000494.01.T01:CDS 45.0%
! TGTTTAAGGCTTCTGCTGCT+GGG - Chr1:6911479-6911498 MsG0180000494.01.T01:CDS 45.0%
! TTCCACCTATTTGAGACCTC+TGG - Chr1:6914545-6914564 MsG0180000494.01.T01:intron 45.0%
! TTGATTGCACTGGTACCTAG+TGG - Chr1:6911517-6911536 MsG0180000494.01.T01:CDS 45.0%
!! AAGAAGTGCTCCCGTTGTAA+AGG - Chr1:6910703-6910722 MsG0180000494.01.T01:CDS 45.0%
!! AAGGATTTGGCTTGCAGTAG+AGG - Chr1:6915150-6915169 MsG0180000494.01.T01:intron 45.0%
!! TCAGCTTGTTCAGTTTTGCC+AGG + Chr1:6914811-6914830 None:intergenic 45.0%
!! TTTACAACGGGAGCACTTCT+TGG + Chr1:6910704-6910723 None:intergenic 45.0%
AGCCCTTACATGAGTGAAGC+TGG - Chr1:6914033-6914052 MsG0180000494.01.T01:CDS 50.0%
AGCTAAACGAGAGCAGTCTG+CGG - Chr1:6915110-6915129 MsG0180000494.01.T01:intron 50.0%
AGCTGTCCCTTCTAACCTTC+AGG - Chr1:6912851-6912870 MsG0180000494.01.T01:intron 50.0%
AGGATGCTCACGAGTTCATG+AGG - Chr1:6912645-6912664 MsG0180000494.01.T01:intron 50.0%
AGTCCACAAGGAGGAAATCC+CGG + Chr1:6912192-6912211 None:intergenic 50.0%
ATCCCATCATCGGAAAGAGG+TGG - Chr1:6915803-6915822 MsG0180000494.01.T01:CDS 50.0%
ATCGGAAAGAGGTGGTGAGT+TGG - Chr1:6915811-6915830 MsG0180000494.01.T01:CDS 50.0%
ATGCCTCCCTTGAACTGACA+AGG - Chr1:6911960-6911979 MsG0180000494.01.T01:intron 50.0%
CAAGATGATACTGGTGTGGC+TGG - Chr1:6915441-6915460 MsG0180000494.01.T01:intron 50.0%
CACCACCTCTTTCCGATGAT+GGG + Chr1:6915808-6915827 None:intergenic 50.0%
CCAAGGCCTTCACATTTGAG+AGG + Chr1:6914837-6914856 None:intergenic 50.0%
CCCTTTATGGTTCCTTGCCT+TGG - Chr1:6912032-6912051 MsG0180000494.01.T01:intron 50.0%
CCTCTCAAATGTGAAGGCCT+TGG - Chr1:6914834-6914853 MsG0180000494.01.T01:CDS 50.0%
CTAGTGGTTACGGTACTTCC+AGG - Chr1:6911533-6911552 MsG0180000494.01.T01:CDS 50.0%
CTCTTTGGCATCTCTCGTCA+AGG + Chr1:6911682-6911701 None:intergenic 50.0%
GAAGCGCAAACAGCACAAAC+AGG + Chr1:6910673-6910692 None:intergenic 50.0%
GAAGGTGAAGTGCATCCTTG+AGG - Chr1:6911638-6911657 MsG0180000494.01.T01:CDS 50.0%
GAGTTAAGAACACCGGGCAT+TGG + Chr1:6910643-6910662 None:intergenic 50.0%
GCACTTCACCTTCGACAACA+AGG + Chr1:6911631-6911650 None:intergenic 50.0%
GCAGCTCCTTAACCAACATG+AGG - Chr1:6912002-6912021 MsG0180000494.01.T01:intron 50.0%
GCTACTCCACATGAAGATGC+TGG - Chr1:6915645-6915664 MsG0180000494.01.T01:intron 50.0%
GCTCCAAATGGGGCAACTAA+TGG - Chr1:6911454-6911473 MsG0180000494.01.T01:CDS 50.0%
GGCGACCACCAAAAATGTGT+TGG + Chr1:6912890-6912909 None:intergenic 50.0%
GGCTTGCAGTAGAGATTGTG+AGG - Chr1:6915005-6915024 MsG0180000494.01.T01:intron 50.0%
GGGATGTTGTACATGCAGAG+TGG - Chr1:6913958-6913977 MsG0180000494.01.T01:intron 50.0%
GGTTGCTTGTGTGGAATTGG+AGG - Chr1:6914296-6914315 MsG0180000494.01.T01:intron 50.0%
TACATGCAGAGTGGGAGGTT+TGG - Chr1:6913967-6913986 MsG0180000494.01.T01:intron 50.0%
TCACCACCTCTTTCCGATGA+TGG + Chr1:6915809-6915828 None:intergenic 50.0%
TCGGAAAGAGGTGGTGAGTT+GGG - Chr1:6915812-6915831 MsG0180000494.01.T01:CDS 50.0%
TGCTTGTGTGGAATTGGAGG+AGG - Chr1:6914299-6914318 MsG0180000494.01.T01:intron 50.0%
TGTGGGATAGGAAGCAACAC+CGG + Chr1:6915682-6915701 None:intergenic 50.0%
TGTTGTACATGCAGAGTGGG+AGG - Chr1:6913962-6913981 MsG0180000494.01.T01:intron 50.0%
! GCACTGGTACCTAGTGGTTA+CGG - Chr1:6911523-6911542 MsG0180000494.01.T01:CDS 50.0%
! GTGTTTAAGGCTTCTGCTGC+TGG - Chr1:6911478-6911497 MsG0180000494.01.T01:CDS 50.0%
! GTTAAGAACACCGGGCATTG+GGG + Chr1:6910641-6910660 None:intergenic 50.0%
! GTTTAAGGCTTCTGCTGCTG+GGG - Chr1:6911480-6911499 MsG0180000494.01.T01:CDS 50.0%
! TTTAAGGCTTCTGCTGCTGG+GGG - Chr1:6911481-6911500 MsG0180000494.01.T01:CDS 50.0%
!! ATTGGAGGAGGTGCTTTCTC+AGG - Chr1:6914311-6914330 MsG0180000494.01.T01:intron 50.0%
!! CTGGAAGTACCGTAACCACT+AGG + Chr1:6911535-6911554 None:intergenic 50.0%
!! TTGGAGGAGGTGCTTTCTCA+GGG - Chr1:6914312-6914331 MsG0180000494.01.T01:intron 50.0%
AAGCCGGGATTTCCTCCTTG+TGG - Chr1:6912186-6912205 MsG0180000494.01.T01:intron 55.0%
ATTGGGGAGGTGGGAGAAGA+AGG + Chr1:6910625-6910644 None:intergenic 55.0%
CGAACAGTGGAAGTGGAACC+TGG - Chr1:6914790-6914809 MsG0180000494.01.T01:intron 55.0%
GGCTTGCAGTAGAGGTTGTG+AGG - Chr1:6915158-6915177 MsG0180000494.01.T01:intron 55.0%
GTGGCCCTTCTCCAACAAGT+AGG + Chr1:6912387-6912406 None:intergenic 55.0%
GTTGGTTAAGGAGCTGCCTC+TGG + Chr1:6911999-6912018 None:intergenic 55.0%
TCATGGAGATGCTGCCTCGT+TGG - Chr1:6913314-6913333 MsG0180000494.01.T01:intron 55.0%
TGGTGGTCGCCTTCAATCTG+AGG - Chr1:6912899-6912918 MsG0180000494.01.T01:intron 55.0%
! AGGTTTTCCCTAGGCACCAG+AGG - Chr1:6911980-6911999 MsG0180000494.01.T01:intron 55.0%
! GCCGCTTGTTGCCTACTTGT+TGG - Chr1:6912373-6912392 MsG0180000494.01.T01:CDS 55.0%
! TCAAGGGAGGCATATGCGCT+TGG + Chr1:6911953-6911972 None:intergenic 55.0%
!! ACAACGGGAGCACTTCTTGG+TGG + Chr1:6910701-6910720 None:intergenic 55.0%
AGGTGTACTGCCCGACCATC+AGG - Chr1:6914724-6914743 MsG0180000494.01.T01:intron 60.0%
GCTTCTGCTGCTGGGGGTAA+AGG - Chr1:6911487-6911506 MsG0180000494.01.T01:CDS 60.0%
TGGAGATGCTGCCTCGTTGG+AGG - Chr1:6913317-6913336 MsG0180000494.01.T01:intron 60.0%
! GCTGCTGTTTGGCAGGTGTC+AGG - Chr1:6913604-6913623 MsG0180000494.01.T01:intron 60.0%
! GCTGGGTCTTGTCCTTCTCC+AGG - Chr1:6915459-6915478 MsG0180000494.01.T01:intron 60.0%
!! AAGAACACCGGGCATTGGGG+AGG + Chr1:6910638-6910657 None:intergenic 60.0%
AGGAGCTGCCTCTGGTGCCT+AGG + Chr1:6911991-6912010 None:intergenic 65.0%
GGAGCTGCCTCTGGTGCCTA+GGG + Chr1:6911990-6912009 None:intergenic 65.0%
GTCGGGCAGTACACCTGTCC+AGG + Chr1:6914720-6914739 None:intergenic 65.0%
TCTCCCACCTCCCCAATGCC+CGG - Chr1:6910628-6910647 MsG0180000494.01.T01:CDS 65.0%
!! AACACCGGGCATTGGGGAGG+TGG + Chr1:6910635-6910654 None:intergenic 65.0%
!! ACACCGGGCATTGGGGAGGT+GGG + Chr1:6910634-6910653 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr1 gene 6910444 6915948 6910444 ID=MsG0180000494.01;Name=MsG0180000494.01
Chr1 mRNA 6910444 6915948 6910444 ID=MsG0180000494.01.T01;Parent=MsG0180000494.01;Name=MsG0180000494.01.T01;_AED=0.43;_eAED=0.43;_QI=25|1|1|1|1|1|11|184|831
Chr1 exon 6915655 6915948 6915655 ID=MsG0180000494.01.T01:exon:2343;Parent=MsG0180000494.01.T01
Chr1 exon 6914816 6915023 6914816 ID=MsG0180000494.01.T01:exon:2344;Parent=MsG0180000494.01.T01
Chr1 exon 6914163 6914251 6914163 ID=MsG0180000494.01.T01:exon:2345;Parent=MsG0180000494.01.T01
Chr1 exon 6913976 6914061 6913976 ID=MsG0180000494.01.T01:exon:2346;Parent=MsG0180000494.01.T01
Chr1 exon 6913726 6913888 6913726 ID=MsG0180000494.01.T01:exon:2347;Parent=MsG0180000494.01.T01
Chr1 exon 6913472 6913595 6913472 ID=MsG0180000494.01.T01:exon:2348;Parent=MsG0180000494.01.T01
Chr1 exon 6912989 6913146 6912989 ID=MsG0180000494.01.T01:exon:2349;Parent=MsG0180000494.01.T01
Chr1 exon 6912689 6912773 6912689 ID=MsG0180000494.01.T01:exon:2350;Parent=MsG0180000494.01.T01
Chr1 exon 6912204 6912416 6912204 ID=MsG0180000494.01.T01:exon:2351;Parent=MsG0180000494.01.T01
Chr1 exon 6912034 6912095 6912034 ID=MsG0180000494.01.T01:exon:2352;Parent=MsG0180000494.01.T01
Chr1 exon 6910444 6911666 6910444 ID=MsG0180000494.01.T01:exon:2353;Parent=MsG0180000494.01.T01
Chr1 five_prime_UTR 6915924 6915948 6915924 ID=MsG0180000494.01.T01:five_prime_utr;Parent=MsG0180000494.01.T01
Chr1 CDS 6915655 6915923 6915655 ID=MsG0180000494.01.T01:cds;Parent=MsG0180000494.01.T01
Chr1 CDS 6914816 6915023 6914816 ID=MsG0180000494.01.T01:cds;Parent=MsG0180000494.01.T01
Chr1 CDS 6914163 6914251 6914163 ID=MsG0180000494.01.T01:cds;Parent=MsG0180000494.01.T01
Chr1 CDS 6913976 6914061 6913976 ID=MsG0180000494.01.T01:cds;Parent=MsG0180000494.01.T01
Chr1 CDS 6913726 6913888 6913726 ID=MsG0180000494.01.T01:cds;Parent=MsG0180000494.01.T01
Chr1 CDS 6913472 6913595 6913472 ID=MsG0180000494.01.T01:cds;Parent=MsG0180000494.01.T01
Chr1 CDS 6912989 6913146 6912989 ID=MsG0180000494.01.T01:cds;Parent=MsG0180000494.01.T01
Chr1 CDS 6912689 6912773 6912689 ID=MsG0180000494.01.T01:cds;Parent=MsG0180000494.01.T01
Chr1 CDS 6912204 6912416 6912204 ID=MsG0180000494.01.T01:cds;Parent=MsG0180000494.01.T01
Chr1 CDS 6912034 6912095 6912034 ID=MsG0180000494.01.T01:cds;Parent=MsG0180000494.01.T01
Chr1 CDS 6910628 6911666 6910628 ID=MsG0180000494.01.T01:cds;Parent=MsG0180000494.01.T01
Chr1 three_prime_UTR 6910444 6910627 6910444 ID=MsG0180000494.01.T01:three_prime_utr;Parent=MsG0180000494.01.T01
Gene Sequence

>MsG0180000494.01.T01

ATGCTTGTAATCGGTGGTGTATCGTGGGATCTCAATCGATTCCTTCAATTCATATTCACCGCTCTTGTAATCGCTATTGGATTGCACACTCTTGTCAAGAACACCGCTTCTAAATACTTCGAAGTCGACGCTAATTTCGAAGGAGATCATCATCCTTCTTCTCCCACCTCCCCAATGCCCGGTGTTCTTAACTCCGATGAGCCTGTTTGTGCTGTTTGCGCTTCTCATGCCACCAAGAAGTGCTCCCGTTGTAAAGGCGTTCGATATTGCTCAACAGAATGTCAACAGTCGCATTGGAATTCCGGGCATAAGAAAAAATGCAAAAGTAATAGCGGTGCCAATGTATTTAACTCGGCTCCAAATGGGGCAACTAATGGTGTGTTTAAGGCTTCTGCTGCTGGGGGTAAAGGATCGAATTTGATTGCACTGGTACCTAGTGGTTACGGTACTTCCAGGCCTATCAAGAAGCCTAAAGATGTTCTTTTTCCTTATGATGAATTTGTTAAACTATTTAACTGGGACAAGCCGGGATTTCCTCCTTGTGGACTCTTGAATTGTGGAAACAGTTGTTTTGCGAATGTGGTTCTTCAGTGTCTCTCATTCACAAAGCCGCTTGTTGCCTACTTGTTGGAGAAGGGCCACCGAAATGAATGCATTTGTAATGATTGGTGCTTTCTATGTGAGTTTGAAAGTCATGTTGAAAGAGCAAGGCTAAGTTCACAGGCGTTTTCTCCAATGAATATTCTATCTCGTTTGCCTAATATCGGTGGTACTTTAGGTTATGGAAGACAAGAGGATGCTCACGAGTTCATGAGGTTTTCAATTGATACTATGCAATCTGTTTGCCTTGATGAATTTGGTGGAGAAAAAGCTGTCCCTTCTAACCTTCAGGAGACAACCATTATCCAACACATTTTTGGTGGTCGCCTTCAATCTGAGGTTATTTGCACAAAGTGTGATAAGACTTCAAATCAGTATGAAAGTATGATGGACTTGACAGTTGAAATTCATGGAGATGCTGCCTCGTTGGAGGAATGTCTAGATCAGTTTACTGTTAAAGAGTGGCTTGATGGGGAAAATATGTATAAATGTGAGGGGTGTCAGGACTATGTAAAGGCATGGAAACGTCTTACTGTGAAATGTGCTCCAAATATTCTTACAATTGCCTTGAAAAGATTCCAGAGTGGGAGGTTTGGAAAACTTAACAAAAGAGTAGCCTTCCCTGAGACTTTAAATCTTAGCCCTTACATGAGTGAAGCTGGAGATGGATCTGATATCTATAATTTGTATGCTGTTGTAGTCCATATTGATATGTTAAATGCTTCATTTTTTGGTCATTACATCTGCTACATCAAGGATTTCAGGGGAAACTGGTATAGGATTGATGACTCAAAGGTTGCTTGTGTGGAATTGGAGGAGGTGCTTTCTCAGGGAGCATATATGCTGTTGTATAAAAGGTGTACTGCCCGACCATCAGGCCTTCAAATTCAAACTACCGAATCTTCAGGGAATGTAAAAGAGCGAACAGTGGAAGTGGAACCTGGCAAAACTGAACAAGCTGAATGCCTCTCAAATGTGAAGGCCTTGGATTGCAATAGAGATTGTGAGGTTTCACCATCTGATATTAGTCCAGAATCAAAGGTTTCTTCTGGTGATGAATACGAGTCTTCCATTGAATTGAACTCAGAAGCTAAAAGAGAGCAGTCTGAGGACACACTCTCAAATGTGAAGGTGTTGGCTTGCAGTAGAGATTGTGAGGTTTCACCATCTGATAATATTAGTCAAGAATTGAAGGTTTCTTCTGGTTATGAATATGAGTCCTCCATTCCATTGAATTCCGAAGCTAAACGAGAGCAGTCTGCGGACACACTCTCAAATGTGAAGGATTTGGCTTGCAGTAGAGGTTGTGAGGTTGTACCATCTGATATTAGTCCAGAATTGAAGGTTTCATCCGGCTATGATTACGAGTCTTCTGTTGAAGTGAACTCAGAAGCTAAAAGAGAGCAGTCTGACGCAGACATGATTGATGTTGAGTCAACTGATAATGGTAATGATATTTCTTATAGTGCTGTTGATGAATCATCTTATTTACCCATTTCTCATGTTGTTGAAGATTTGATTGATGTGGATATGGGAAGACCTATAGAAGAGACTTCAGGCTGTGCGCAAGATCAAGATGATACTGGTGTGGCTGGGTCTTGTCCTTCTCCAGGTTTACCAAATGATTTTTCTTTCTTGGATAAGCATTCTTCTGTTTCAATAGATTATCGAAATGTGGAGGAAGATTTGGAAGATACAGATGCGGTTAAATGCAAGTTGCTAACAGCTAACGACGATGCATATTATGGCAATGGATATGTTAGTGCAAACCAATCTGCTACTCCACATGAAGATGCTGGTACTCTATTTTCCGGTGTTGCTTCCTATCCCACAGAAAAGGACAGAGGAAATGGAATTAAGAAAGTGGAAATATCAGCGGATAAGTTAATAATGTAG

Protein sequence

>MsG0180000494.01.T01

MLVIGGVSWDLNRFLQFIFTALVIAIGLHTLVKNTASKYFEVDANFEGDHHPSSPTSPMPGVLNSDEPVCAVCASHATKKCSRCKGVRYCSTECQQSHWNSGHKKKCKSNSGANVFNSAPNGATNGVFKASAAGGKGSNLIALVPSGYGTSRPIKKPKDVLFPYDEFVKLFNWDKPGFPPCGLLNCGNSCFANVVLQCLSFTKPLVAYLLEKGHRNECICNDWCFLCEFESHVERARLSSQAFSPMNILSRLPNIGGTLGYGRQEDAHEFMRFSIDTMQSVCLDEFGGEKAVPSNLQETTIIQHIFGGRLQSEVICTKCDKTSNQYESMMDLTVEIHGDAASLEECLDQFTVKEWLDGENMYKCEGCQDYVKAWKRLTVKCAPNILTIALKRFQSGRFGKLNKRVAFPETLNLSPYMSEAGDGSDIYNLYAVVVHIDMLNASFFGHYICYIKDFRGNWYRIDDSKVACVELEEVLSQGAYMLLYKRCTARPSGLQIQTTESSGNVKERTVEVEPGKTEQAECLSNVKALDCNRDCEVSPSDISPESKVSSGDEYESSIELNSEAKREQSEDTLSNVKVLACSRDCEVSPSDNISQELKVSSGYEYESSIPLNSEAKREQSADTLSNVKDLACSRGCEVVPSDISPELKVSSGYDYESSVEVNSEAKREQSDADMIDVESTDNGNDISYSAVDESSYLPISHVVEDLIDVDMGRPIEETSGCAQDQDDTGVAGSCPSPGLPNDFSFLDKHSSVSIDYRNVEEDLEDTDAVKCKLLTANDDAYYGNGYVSANQSATPHEDAGTLFSGVASYPTEKDRGNGIKKVEISADKLIM*