AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780041370.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780041370.01.T01 MTR_7g109720 97.908 765 12 2 1 764 1 762 0.0 1525
MsG0780041370.01.T01 MTR_2g007000 45.276 561 273 8 70 613 341 884 2.17e-142 447
MsG0780041370.01.T01 MTR_2g100230 49.652 431 213 4 181 609 42 470 1.42e-138 418
MsG0780041370.01.T01 MTR_4g105100 50.117 427 210 3 192 617 160 584 8.29e-138 421
MsG0780041370.01.T01 MTR_4g105100 49.315 365 183 2 192 555 160 523 6.71e-115 358
MsG0780041370.01.T01 MTR_6g005550 43.187 433 228 7 215 644 146 563 9.11e-109 348
MsG0780041370.01.T01 MTR_2g032630 43.961 414 218 7 211 615 467 875 8.69e-105 348
MsG0780041370.01.T01 MTR_3g467550 41.687 403 220 5 198 587 77 477 2.51e-103 329
MsG0780041370.01.T01 MTR_4g134170 40.783 434 234 6 196 609 249 679 1.02e-101 329
MsG0780041370.01.T01 MTR_6g005320 40.783 434 232 7 196 609 211 639 4.75e-100 323
MsG0780041370.01.T01 MTR_1g054630 40.295 474 247 9 192 646 114 570 3.62e-98 317
MsG0780041370.01.T01 MTR_3g467550 44.167 360 190 4 237 587 89 446 5.92e-98 313
MsG0780041370.01.T01 MTR_3g083690 39.400 467 240 9 172 615 94 540 3.71e-95 309
MsG0780041370.01.T01 MTR_3g467550 41.287 373 205 4 198 557 77 448 2.23e-94 302
MsG0780041370.01.T01 MTR_1g095810 42.163 453 239 10 204 643 115 557 6.95e-94 305
MsG0780041370.01.T01 MTR_1g026830 40.166 483 246 11 204 667 117 575 4.88e-93 303
MsG0780041370.01.T01 MTR_5g027840 43.655 394 211 7 224 610 94 483 9.43e-93 300
MsG0780041370.01.T01 MTR_4g114120 40.455 440 235 9 217 631 123 560 1.02e-91 301
MsG0780041370.01.T01 MTR_7g056830 36.740 362 222 5 230 590 6 361 4.18e-70 237
MsG0780041370.01.T01 MTR_6g082080 36.188 362 224 5 230 590 6 361 6.19e-70 236
MsG0780041370.01.T01 MTR_7g100820 34.975 406 251 6 215 615 111 508 3.14e-69 239
MsG0780041370.01.T01 MTR_4g079320 37.017 362 221 6 235 594 20 376 1.44e-65 233
MsG0780041370.01.T01 MTR_3g449250 36.512 367 220 6 225 589 88 443 9.98e-65 226
MsG0780041370.01.T01 MTR_3g449250 36.512 367 220 6 225 589 88 443 3.09e-64 225
MsG0780041370.01.T01 MTR_3g049990 36.387 382 229 6 234 605 152 529 1.26e-63 227
MsG0780041370.01.T01 MTR_2g066050 36.512 367 219 7 234 594 53 411 1.74e-62 218
MsG0780041370.01.T01 MTR_2g438110 33.705 359 221 6 230 583 30 376 5.77e-62 214
MsG0780041370.01.T01 MTR_2g041140 36.292 383 229 7 234 605 141 519 1.91e-61 221
MsG0780041370.01.T01 MTR_5g090120 35.422 367 224 6 225 589 79 434 3.06e-61 217
MsG0780041370.01.T01 MTR_2g099620 34.530 362 230 4 233 594 24 378 3.43e-61 211
MsG0780041370.01.T01 MTR_2g099620 34.530 362 230 4 233 594 40 394 3.46e-61 212
MsG0780041370.01.T01 MTR_8g018400 34.072 361 231 4 234 594 41 394 6.85e-60 208
MsG0780041370.01.T01 MTR_4g125970 34.930 355 222 6 234 587 41 387 8.98e-59 205
MsG0780041370.01.T01 MTR_2g039960 33.795 361 232 4 234 594 41 394 1.15e-58 205
MsG0780041370.01.T01 MTR_4g125970 34.930 355 222 6 234 587 58 404 1.61e-58 205
MsG0780041370.01.T01 MTR_6g033070 30.549 419 274 8 201 611 109 518 1.57e-57 205
MsG0780041370.01.T01 MTR_6g056080 33.594 384 217 11 223 591 104 464 8.77e-53 195
MsG0780041370.01.T01 MTR_8g027770 36.388 371 218 11 235 590 202 569 1.23e-52 194
MsG0780041370.01.T01 MTR_8g027775 35.135 370 224 11 235 590 103 470 1.02e-51 190
MsG0780041370.01.T01 MTR_7g076830 31.373 357 233 7 235 590 144 489 3.30e-51 187
MsG0780041370.01.T01 MTR_8g027780 34.595 370 226 12 235 590 107 474 4.83e-51 188
MsG0780041370.01.T01 MTR_7g076800 31.373 357 233 7 235 590 142 487 6.83e-51 186
MsG0780041370.01.T01 MTR_7g076820 31.092 357 234 7 235 590 151 496 2.06e-50 185
MsG0780041370.01.T01 MTR_4g112340 34.181 354 224 6 247 594 110 460 4.41e-50 185
MsG0780041370.01.T01 MTR_1g083130 30.216 417 242 8 233 604 25 437 4.72e-50 186
MsG0780041370.01.T01 MTR_8g097000 34.400 375 228 11 235 594 289 660 2.50e-49 186
MsG0780041370.01.T01 MTR_3g107420 30.704 355 232 8 235 584 48 393 1.31e-48 177
MsG0780041370.01.T01 MTR_1g012420 30.423 355 233 8 235 584 48 393 2.88e-48 177
MsG0780041370.01.T01 MTR_7g057250 32.564 433 210 14 235 592 164 589 2.97e-48 183
MsG0780041370.01.T01 MTR_3g071620 32.609 368 227 7 244 591 26 392 7.27e-48 179
MsG0780041370.01.T01 MTR_4g010565 31.564 358 225 10 235 584 125 470 9.98e-48 177
MsG0780041370.01.T01 MTR_6g039840 30.688 378 245 7 232 594 108 483 1.53e-47 180
MsG0780041370.01.T01 MTR_5g092560 37.578 322 190 8 257 571 99 416 9.07e-47 178
MsG0780041370.01.T01 MTR_2g055850 31.680 363 240 5 233 590 90 449 1.21e-46 175
MsG0780041370.01.T01 MTR_1g102410 31.026 390 217 11 223 582 45 412 5.87e-46 174
MsG0780041370.01.T01 MTR_4g059460 29.567 416 218 13 234 575 44 458 5.06e-45 171
MsG0780041370.01.T01 MTR_4g068990 36.137 321 195 8 257 571 99 415 5.29e-45 173
MsG0780041370.01.T01 MTR_2g043360 29.087 416 220 13 234 575 41 455 6.78e-44 168
MsG0780041370.01.T01 MTR_8g027780 33.721 344 210 12 235 564 107 446 1.16e-43 164
MsG0780041370.01.T01 MTR_2g063080 28.873 426 243 8 229 598 104 525 2.36e-40 157
MsG0780041370.01.T01 MTR_1g061970 29.630 378 232 12 234 584 80 450 4.11e-39 152
MsG0780041370.01.T01 MTR_5g069330 26.512 430 286 12 232 648 5 417 3.58e-38 147
MsG0780041370.01.T01 MTR_5g069330 26.512 430 286 12 232 648 1 413 4.30e-38 147
MsG0780041370.01.T01 MTR_3g118120 26.598 391 259 8 232 595 130 519 5.03e-36 144
MsG0780041370.01.T01 MTR_4g049910 28.232 379 244 9 224 586 45 411 8.16e-35 138
MsG0780041370.01.T01 MTR_0915s0010 29.066 289 195 5 248 535 3 282 1.09e-32 128
MsG0780041370.01.T01 MTR_4g112320 31.338 284 184 6 315 594 2 278 1.83e-31 127
MsG0780041370.01.T01 MTR_6g039840 29.373 303 201 6 303 594 7 307 6.57e-30 125
MsG0780041370.01.T01 MTR_4g459350 33.023 215 122 6 234 426 41 255 7.05e-30 120
MsG0780041370.01.T01 MTR_4g077370 36.683 199 118 3 234 429 250 443 2.13e-29 122
MsG0780041370.01.T01 MTR_4g077370 35.961 203 97 7 234 428 2 179 1.73e-23 104
MsG0780041370.01.T01 MTR_8g032230 36.943 157 94 2 230 385 6 158 2.49e-28 112
MsG0780041370.01.T01 MTR_1g046570 25.995 377 229 8 251 588 8 373 4.36e-28 117
MsG0780041370.01.T01 MTR_1g022305 25.176 425 241 12 232 649 1 355 1.01e-27 117
MsG0780041370.01.T01 MTR_8g018370 27.059 340 204 11 263 594 2 305 1.23e-27 114
MsG0780041370.01.T01 MTR_5g092560 40.206 194 107 6 384 571 15 205 3.16e-27 117
MsG0780041370.01.T01 MTR_2g043360 27.545 334 168 11 313 575 7 337 3.99e-26 113
MsG0780041370.01.T01 MTR_3g107420 32.850 207 129 5 235 437 48 248 6.42e-26 109
MsG0780041370.01.T01 MTR_4g068990 37.824 193 112 6 384 571 15 204 9.03e-25 109
MsG0780041370.01.T01 MTR_5g077690 23.604 394 221 8 271 595 70 452 1.14e-23 105
MsG0780041370.01.T01 MTR_4g131750 27.696 408 242 17 228 594 76 471 1.42e-21 99.4
MsG0780041370.01.T01 MTR_2g042440 25.150 334 219 9 252 571 39 355 6.54e-18 89.0
MsG0780041370.01.T01 MTR_2g042440 25.150 334 219 9 252 571 39 355 6.82e-18 89.0
MsG0780041370.01.T01 MTR_2g031570 43.939 66 37 0 234 299 72 137 3.55e-13 67.8
MsG0780041370.01.T01 MTR_1g050730 23.380 355 252 12 269 612 175 520 8.52e-13 72.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780041370.01.T01 AT2G47330 78.505 749 142 9 1 747 1 732 0.0 1124
MsG0780041370.01.T01 AT1G20920 44.007 584 299 11 69 642 30 595 2.56e-144 444
MsG0780041370.01.T01 AT5G63120 51.659 422 201 3 193 613 125 544 1.25e-142 432
MsG0780041370.01.T01 AT1G20920 44.505 555 286 8 69 613 368 910 1.92e-141 446
MsG0780041370.01.T01 AT1G20920 44.505 555 286 8 69 613 368 910 1.92e-141 446
MsG0780041370.01.T01 AT1G20920 44.505 555 286 8 69 613 368 910 1.92e-141 446
MsG0780041370.01.T01 AT1G20920 44.505 555 286 8 69 613 368 910 1.92e-141 446
MsG0780041370.01.T01 AT1G20920 44.505 555 286 8 69 613 368 910 1.92e-141 446
MsG0780041370.01.T01 AT1G20920 44.505 555 286 8 69 613 368 910 1.92e-141 446
MsG0780041370.01.T01 AT1G55150 49.526 422 210 3 192 612 58 477 3.19e-138 417
MsG0780041370.01.T01 AT1G55150 49.526 422 210 3 192 612 83 502 1.63e-137 416
MsG0780041370.01.T01 AT3G09620 43.920 551 262 9 69 613 239 748 5.02e-130 411
MsG0780041370.01.T01 AT3G09620 43.920 551 262 9 69 613 240 749 6.20e-130 411
MsG0780041370.01.T01 AT5G63120 51.852 351 167 2 193 542 125 474 3.43e-119 367
MsG0780041370.01.T01 AT5G63120 51.852 351 167 2 193 542 125 474 4.39e-119 367
MsG0780041370.01.T01 AT5G63120 51.852 351 167 2 193 542 125 474 4.39e-119 367
MsG0780041370.01.T01 AT5G63120 51.852 351 167 2 193 542 125 474 4.39e-119 367
MsG0780041370.01.T01 AT5G14610 42.344 418 235 5 202 617 130 543 4.28e-106 338
MsG0780041370.01.T01 AT5G14610 42.344 418 235 5 202 617 130 543 4.93e-106 338
MsG0780041370.01.T01 AT5G14610 42.344 418 235 5 202 617 138 551 8.68e-106 338
MsG0780041370.01.T01 AT3G01540 42.143 420 233 7 202 617 127 540 4.77e-105 335
MsG0780041370.01.T01 AT3G01540 42.143 420 233 7 202 617 127 540 4.77e-105 335
MsG0780041370.01.T01 AT3G01540 42.143 420 233 7 202 617 127 540 4.77e-105 335
MsG0780041370.01.T01 AT3G01540 42.143 420 233 7 202 617 127 540 6.24e-105 335
MsG0780041370.01.T01 AT3G06480 42.689 424 233 7 195 615 399 815 9.09e-105 346
MsG0780041370.01.T01 AT2G33730 41.784 426 225 6 204 609 284 706 3.18e-102 331
MsG0780041370.01.T01 AT2G42520 42.478 452 236 7 183 615 108 554 6.35e-102 327
MsG0780041370.01.T01 AT2G42520 42.478 452 236 7 183 615 108 554 6.35e-102 327
MsG0780041370.01.T01 AT2G42520 42.478 452 236 7 183 615 108 554 6.35e-102 327
MsG0780041370.01.T01 AT3G58510 41.333 450 241 8 183 615 101 544 6.69e-99 319
MsG0780041370.01.T01 AT3G58510 41.333 450 241 8 183 615 101 544 6.69e-99 319
MsG0780041370.01.T01 AT3G58510 41.333 450 241 8 183 615 101 544 6.69e-99 319
MsG0780041370.01.T01 AT5G14610 44.293 368 199 5 252 617 49 412 4.16e-97 311
MsG0780041370.01.T01 AT5G14610 44.293 368 199 5 252 617 49 412 4.16e-97 311
MsG0780041370.01.T01 AT5G14610 43.817 372 203 5 248 617 244 611 8.60e-97 316
MsG0780041370.01.T01 AT3G58570 40.222 450 248 9 183 615 96 541 2.53e-96 313
MsG0780041370.01.T01 AT5G51280 40.798 451 248 8 204 643 117 559 3.19e-93 303
MsG0780041370.01.T01 AT4G33370 37.910 488 285 8 173 650 38 517 5.12e-92 298
MsG0780041370.01.T01 AT1G31970 41.604 399 221 7 232 622 115 509 6.73e-88 287
MsG0780041370.01.T01 AT5G14610 42.693 349 195 4 202 548 138 483 2.57e-87 285
MsG0780041370.01.T01 AT3G06480 43.213 361 194 7 195 551 399 752 3.56e-86 289
MsG0780041370.01.T01 AT1G28180 44.785 326 171 5 263 584 3 323 2.20e-81 265
MsG0780041370.01.T01 AT3G09720 34.615 416 258 8 216 625 120 527 2.18e-71 243
MsG0780041370.01.T01 AT3G09720 34.615 416 258 8 216 625 120 527 2.18e-71 243
MsG0780041370.01.T01 AT5G60990 34.688 369 226 6 232 590 8 371 7.35e-67 229
MsG0780041370.01.T01 AT1G16280 36.885 366 217 7 235 594 60 417 4.45e-65 225
MsG0780041370.01.T01 AT1G77030 36.957 368 213 8 235 594 30 386 4.80e-64 229
MsG0780041370.01.T01 AT3G22330 35.775 355 222 5 237 589 108 458 4.45e-63 223
MsG0780041370.01.T01 AT3G02065 31.435 439 278 9 197 623 75 502 1.84e-62 218
MsG0780041370.01.T01 AT3G02065 31.435 439 278 9 197 623 75 502 1.84e-62 218
MsG0780041370.01.T01 AT3G13920 35.278 360 220 5 233 589 39 388 1.98e-62 215
MsG0780041370.01.T01 AT3G13920 35.278 360 220 5 233 589 29 378 2.38e-62 215
MsG0780041370.01.T01 AT3G13920 35.278 360 220 5 233 589 43 392 3.99e-62 215
MsG0780041370.01.T01 AT3G13920 35.278 360 220 5 233 589 39 388 4.59e-62 214
MsG0780041370.01.T01 AT4G16630 36.544 353 219 4 234 584 168 517 1.03e-61 222
MsG0780041370.01.T01 AT1G54270 35.278 360 220 5 233 589 39 388 1.49e-61 213
MsG0780041370.01.T01 AT3G19760 32.213 357 229 5 230 583 32 378 1.86e-61 213
MsG0780041370.01.T01 AT3G22310 36.415 357 217 7 237 589 120 470 3.64e-61 217
MsG0780041370.01.T01 AT3G22310 36.415 357 217 7 237 589 120 470 4.85e-61 217
MsG0780041370.01.T01 AT3G13920 36.257 342 205 5 251 589 52 383 7.83e-61 211
MsG0780041370.01.T01 AT1G54270 36.257 342 205 5 251 589 52 383 7.24e-60 208
MsG0780041370.01.T01 AT5G26742 38.462 351 202 7 247 589 116 460 1.18e-59 216
MsG0780041370.01.T01 AT5G26742 38.462 351 202 7 247 589 116 460 1.20e-59 216
MsG0780041370.01.T01 AT1G51380 33.148 359 223 6 230 583 19 365 1.56e-59 207
MsG0780041370.01.T01 AT1G72730 33.241 361 234 4 234 594 42 395 2.04e-58 204
MsG0780041370.01.T01 AT5G26742 39.394 330 186 7 268 589 44 367 4.25e-58 209
MsG0780041370.01.T01 AT4G00660 31.653 357 232 7 235 590 133 478 7.93e-54 194
MsG0780041370.01.T01 AT4G00660 31.653 357 232 7 235 590 133 478 7.93e-54 194
MsG0780041370.01.T01 AT5G65900 34.254 362 231 6 233 590 154 512 1.02e-52 194
MsG0780041370.01.T01 AT3G18600 33.889 360 232 5 234 590 90 446 2.33e-52 192
MsG0780041370.01.T01 AT5G62190 36.103 349 199 9 248 582 111 449 4.56e-50 187
MsG0780041370.01.T01 AT5G08610 33.693 371 228 11 235 590 384 751 1.21e-49 188
MsG0780041370.01.T01 AT2G45810 30.337 356 238 7 235 590 156 501 5.19e-49 181
MsG0780041370.01.T01 AT5G63630 33.155 374 234 8 235 594 250 621 5.30e-49 184
MsG0780041370.01.T01 AT3G61240 29.494 356 241 6 235 590 126 471 5.61e-49 181
MsG0780041370.01.T01 AT3G61240 29.494 356 241 6 235 590 126 471 5.61e-49 181
MsG0780041370.01.T01 AT5G63630 33.155 374 234 8 235 594 56 427 8.44e-49 181
MsG0780041370.01.T01 AT3G02065 30.108 372 242 7 262 623 2 365 6.13e-48 174
MsG0780041370.01.T01 AT3G53110 31.507 365 229 8 235 583 93 452 1.48e-47 176
MsG0780041370.01.T01 AT5G11170 31.268 355 228 9 235 583 48 392 2.84e-47 174
MsG0780041370.01.T01 AT5G11200 31.268 355 228 9 235 583 48 392 2.84e-47 174
MsG0780041370.01.T01 AT4G34910 33.248 391 204 8 233 572 46 430 4.31e-47 177
MsG0780041370.01.T01 AT4G09730 32.208 385 234 10 230 594 109 486 9.53e-47 176
MsG0780041370.01.T01 AT5G08620 32.796 372 230 11 235 590 82 449 1.02e-45 172
MsG0780041370.01.T01 AT1G63250 32.626 377 237 9 233 594 328 702 1.15e-45 176
MsG0780041370.01.T01 AT2G07750 32.626 377 237 9 233 594 375 749 1.46e-45 176
MsG0780041370.01.T01 AT5G54910 35.260 346 214 8 232 571 70 411 6.13e-45 173
MsG0780041370.01.T01 AT2G40700 30.159 441 222 15 234 594 31 465 9.44e-44 167
MsG0780041370.01.T01 AT1G71370 33.241 361 222 7 244 591 27 381 1.79e-43 166
MsG0780041370.01.T01 AT5G05450 33.151 365 221 9 244 588 27 388 2.65e-43 166
MsG0780041370.01.T01 AT5G11200 28.499 393 230 10 235 583 48 433 1.14e-42 162
MsG0780041370.01.T01 AT1G12770 28.928 401 229 8 233 579 110 508 6.53e-42 161
MsG0780041370.01.T01 AT1G12770 28.928 401 229 8 233 579 110 508 6.53e-42 161
MsG0780041370.01.T01 AT3G16840 30.676 414 219 11 242 588 199 611 3.99e-41 162
MsG0780041370.01.T01 AT3G16840 30.676 414 219 11 242 588 200 612 4.47e-41 162
MsG0780041370.01.T01 AT5G11200 27.494 411 229 12 235 583 48 451 9.68e-40 154
MsG0780041370.01.T01 AT5G11170 31.447 318 202 9 272 583 2 309 5.69e-39 148
MsG0780041370.01.T01 AT3G06980 27.229 415 269 10 210 595 351 761 1.26e-37 151
MsG0780041370.01.T01 AT1G71280 33.225 307 173 7 244 544 28 308 7.54e-35 136
MsG0780041370.01.T01 AT1G71280 32.704 318 182 7 244 555 28 319 2.77e-34 137
MsG0780041370.01.T01 AT1G51380 31.855 248 156 4 230 475 19 255 1.13e-31 125
MsG0780041370.01.T01 AT1G51380 33.645 214 133 3 230 441 19 225 2.39e-30 122
MsG0780041370.01.T01 AT1G51380 33.645 214 133 3 230 441 19 225 5.91e-30 121
MsG0780041370.01.T01 AT1G28180 49.138 116 56 1 263 375 3 118 1.82e-29 114
MsG0780041370.01.T01 AT4G15850 25.561 446 253 12 223 595 15 454 5.65e-26 113
MsG0780041370.01.T01 AT5G19210 28.058 417 236 17 227 597 68 466 1.88e-24 108
MsG0780041370.01.T01 AT1G59990 26.383 235 139 8 234 450 81 299 6.62e-17 85.1
MsG0780041370.01.T01 AT1G59990 26.383 235 139 8 234 450 81 299 8.63e-17 85.1
MsG0780041370.01.T01 AT2G28600 26.235 324 209 12 306 616 196 502 5.59e-15 79.0

Find 190 sgRNAs with CRISPR-Local

Find 308 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTTTACCGGTTGTGCTTTC+TGG 0.101108 7:+90133118 MsG0780041370.01.T01:CDS
TTGAGGGCGAAGAAGGATTT+AGG 0.143289 7:+90132229 MsG0780041370.01.T01:CDS
TGTTACTGAATCCTTCATTT+TGG 0.152736 7:-90135566 None:intergenic
CAACGAAGCTACTCCTAAAT+TGG 0.189044 7:-90135527 None:intergenic
TGAGAAATTGCCGTGGCTTC+TGG 0.210686 7:+90133717 MsG0780041370.01.T01:CDS
ACCGCGTATGGTCGAGTTTC+TGG 0.230165 7:-90131639 None:intergenic
TGAGGGAGATAATGGAATTT+AGG 0.250084 7:-90131751 None:intergenic
AGTTTGGCTATTCGGGTATC+AGG 0.250256 7:+90132983 MsG0780041370.01.T01:CDS
CTTTGATATTGCTAAAGATA+TGG 0.286650 7:+90133987 MsG0780041370.01.T01:CDS
CAGGAATGATGTCCCAATTT+AGG 0.287222 7:+90135514 MsG0780041370.01.T01:CDS
ATAAAATTTGAGGGAGATAA+TGG 0.287590 7:-90131759 None:intergenic
ATATGCTTTAGCAAATTTCT+TGG 0.299619 7:-90133308 None:intergenic
TGGGTTTGCTCCACAAATTA+TGG 0.309744 7:+90133045 MsG0780041370.01.T01:CDS
CCTTCCTCCTTCTGAAGTTC+AGG 0.311889 7:-90133226 None:intergenic
TTCCGCAGGACGGGAGATTC+AGG 0.312404 7:+90135145 MsG0780041370.01.T01:intron
GTTGTTTGATTGTTCTTCTC+TGG 0.315342 7:-90132029 None:intergenic
TAGATATAAAGATGATTTAG+AGG 0.320038 7:+90132186 MsG0780041370.01.T01:CDS
ATAGGAAGAGTTTGGCTATT+CGG 0.322771 7:+90132975 MsG0780041370.01.T01:CDS
TCCACTTTCTCCTTCGGCTT+CGG 0.327604 7:-90132160 None:intergenic
ATCACCTTGATCAATCATTT+CGG 0.328986 7:-90133749 None:intergenic
TATACAATGCCAAGCTTTAC+CGG 0.334510 7:+90133105 MsG0780041370.01.T01:CDS
AATTCCACTAGTCAAAATTC+TGG 0.335286 7:+90135711 MsG0780041370.01.T01:CDS
TAGGAAGAGTTTGGCTATTC+GGG 0.336769 7:+90132976 MsG0780041370.01.T01:CDS
ACACTAGCTGGCTTTGTATC+TGG 0.337129 7:+90135618 MsG0780041370.01.T01:CDS
TCACCTTGATCAATCATTTC+GGG 0.344876 7:-90133748 None:intergenic
AAGAAATTTGCTAAAGCATA+TGG 0.357035 7:+90133310 MsG0780041370.01.T01:CDS
CTATCTTCCACTTTCTCCTT+CGG 0.357308 7:-90132166 None:intergenic
TGAGGGCGAAGAAGGATTTA+GGG 0.361115 7:+90132230 MsG0780041370.01.T01:CDS
CGATCCATTAGATGCATTCA+TGG 0.362487 7:+90132102 MsG0780041370.01.T01:CDS
CCTTCCATGAATGCATCTAA+TGG 0.370763 7:-90132106 None:intergenic
GATGAAATTGAAGCACAATT+AGG 0.371477 7:+90133805 MsG0780041370.01.T01:CDS
GAGGAGTCACCTTCAATATC+AGG 0.374150 7:+90132454 MsG0780041370.01.T01:CDS
AGCACGGTTTGCTGGTGAAT+TGG 0.382223 7:+90134092 MsG0780041370.01.T01:CDS
GGTGTGCGCGGAGTGGATTT+TGG 0.383444 7:+90135405 MsG0780041370.01.T01:CDS
ATACGTGTCTCTGCTGTCTA+TGG 0.389174 7:+90133334 MsG0780041370.01.T01:CDS
TTTATAGCACCCATAATTTG+TGG 0.390337 7:-90133055 None:intergenic
AGCATGTCTATCAATCTTCC+AGG 0.392561 7:-90133421 None:intergenic
AGCAAGATGTAACTGATTAT+AGG 0.393214 7:+90132957 MsG0780041370.01.T01:CDS
CTAGTGGAATTTACAGTTGA+AGG 0.393513 7:-90135699 None:intergenic
ATCGTGTGCAAGCTCAAGTT+AGG 0.394769 7:+90131784 MsG0780041370.01.T01:five_prime_UTR
TTCTTCTTGTCAAGAACAAT+AGG 0.397551 7:-90132364 None:intergenic
AAGAGCAAGGTTTGGCGGTC+CGG 0.397692 7:-90133559 None:intergenic
GCATCATCTAACGCAGTTCC+AGG 0.398257 7:+90135462 MsG0780041370.01.T01:CDS
GGCATAGCGAAAACTGGTTC+TGG 0.399093 7:+90133154 MsG0780041370.01.T01:CDS
GAATGTGTCCACGGAGTTGA+TGG 0.406543 7:+90134140 MsG0780041370.01.T01:CDS
GCTGATCGAATGTTTGATCT+TGG 0.409409 7:+90133496 MsG0780041370.01.T01:CDS
ATCATTGGCATAGCGAAAAC+TGG 0.412683 7:+90133148 MsG0780041370.01.T01:CDS
AAGTTCGGATTCGAAGGTTT+CGG 0.413016 7:+90131872 MsG0780041370.01.T01:CDS
TCTCCCACTGTCACTCTGAT+AGG 0.413022 7:-90133637 None:intergenic
GGGTTTGCTCCACAAATTAT+GGG 0.419490 7:+90133046 MsG0780041370.01.T01:CDS
AACTGATTATAGGAAGAGTT+TGG 0.423334 7:+90132967 MsG0780041370.01.T01:CDS
CAGAAGGAGGAAGGTCCTAT+AGG 0.424404 7:+90133235 MsG0780041370.01.T01:CDS
AGAAAAGGCAAAGGCAGAGG+TGG 0.426446 7:+90135366 MsG0780041370.01.T01:CDS
GTTCATCGCATTGGAAGAAC+AGG 0.434588 7:+90134018 MsG0780041370.01.T01:CDS
TTTGTATCTGGTGGATCAAT+TGG 0.445406 7:+90135630 MsG0780041370.01.T01:CDS
TCCTATGATCGTGCATATCA+TGG 0.445806 7:+90133198 MsG0780041370.01.T01:CDS
GCTGTAAATTCTCTGCGAAC+AGG 0.449877 7:+90135495 MsG0780041370.01.T01:CDS
TTGCAGAAAAGAGCAAGGTT+TGG 0.450948 7:-90133567 None:intergenic
GTATGATCAAGAGGAGCAAT+AGG 0.454941 7:-90132394 None:intergenic
GCTGCTAAAGCCGTGGATGC+TGG 0.457028 7:+90132313 MsG0780041370.01.T01:CDS
TCCATGATATGCACGATCAT+AGG 0.458040 7:-90133199 None:intergenic
GTTAATAGCTTAGTTGCTGC+TGG 0.458763 7:+90134114 MsG0780041370.01.T01:CDS
TATCTGATGTGCCAATTCTC+TGG 0.460585 7:-90133275 None:intergenic
TTCTCCTTCGGCTTCGGTGG+CGG 0.461021 7:-90132154 None:intergenic
ATGTGCACCTACCAGAGAAT+TGG 0.464889 7:+90133264 MsG0780041370.01.T01:CDS
AACGAAGCTACTCCTAAATT+GGG 0.473246 7:-90135526 None:intergenic
CTGGTCAGAACAACACGAAC+AGG 0.477330 7:+90135742 MsG0780041370.01.T01:CDS
GGTGCACATATCACTCCTAT+AGG 0.477608 7:-90133250 None:intergenic
CACACGATAAATAAAATTTG+AGG 0.479547 7:-90131769 None:intergenic
GTTAAGTTACCTGATATTGA+AGG 0.488917 7:-90132463 None:intergenic
TGCTGCCCTGCATGGTGATA+AGG 0.489958 7:+90133846 MsG0780041370.01.T01:CDS
ATTGGAAGAACAGGCCGTGC+TGG 0.490716 7:+90134027 MsG0780041370.01.T01:CDS
GAGATGTCGAAGAGAAAGTT+CGG 0.490965 7:+90131857 MsG0780041370.01.T01:exon
GGGAGAAAAGGCAAAGGCAG+AGG 0.492204 7:+90135363 MsG0780041370.01.T01:CDS
CAAAATTCTGGAGTAAATCC+TGG 0.496585 7:+90135723 MsG0780041370.01.T01:CDS
CTGTTCGTGTTGTTCTGACC+AGG 0.499100 7:-90135741 None:intergenic
ACACGATAAATAAAATTTGA+GGG 0.499452 7:-90131768 None:intergenic
TTGGATTTGAGCCGCAAGTA+AGG 0.501136 7:+90133515 MsG0780041370.01.T01:CDS
GTTGATGGATCTTGCTATGA+AGG 0.502001 7:+90134155 MsG0780041370.01.T01:CDS
CTCTTCACAACCACCACCAC+CGG 0.502317 7:-90132071 None:intergenic
AATAAGAGACCAACACTAGC+TGG 0.504667 7:+90135606 MsG0780041370.01.T01:CDS
GTATCTGGTGGATCAATTGG+CGG 0.505944 7:+90135633 MsG0780041370.01.T01:CDS
TTGAGATCGTTCGAAACTAT+AGG 0.506823 7:-90131912 None:intergenic
GAATTTACAGTTGAAGGAGC+AGG 0.508575 7:-90135693 None:intergenic
TCTCTACCAGAAAGCACAAC+CGG 0.508638 7:-90133124 None:intergenic
AAAGGCAAAGGCAGAGGTGG+GGG 0.509419 7:+90135369 MsG0780041370.01.T01:CDS
TTTAGGGTTGACGTTGGCGT+CGG 0.513585 7:+90132246 MsG0780041370.01.T01:CDS
GCGTCGGATGCGTTGCATGC+TGG 0.516063 7:+90132262 MsG0780041370.01.T01:CDS
GAGATAGTTGTTGCTACGCC+TGG 0.517266 7:+90133403 MsG0780041370.01.T01:CDS
CTTTCTGGTAGAGATATCAT+TGG 0.519087 7:+90133133 MsG0780041370.01.T01:CDS
CATCGTACTCGATGTTATCA+AGG 0.519589 7:-90132000 None:intergenic
GAAAAGGCAAAGGCAGAGGT+GGG 0.521254 7:+90135367 MsG0780041370.01.T01:CDS
GACAGTGGGAGAGGTGGGGA+TGG 0.524042 7:+90133648 MsG0780041370.01.T01:CDS
AACGATGATAACGCCGGTGG+TGG 0.525263 7:+90132058 MsG0780041370.01.T01:CDS
GACATGCATGTTCATCGCAT+TGG 0.527240 7:+90134009 MsG0780041370.01.T01:CDS
AATACACGAGGAGATGAAAT+CGG 0.527640 7:+90132129 MsG0780041370.01.T01:CDS
GCAAAGTCGAAAAGTTAGCC+AGG 0.529230 7:+90133599 MsG0780041370.01.T01:CDS
TCAAAACGAGATGCAAGAAA+AGG 0.529472 7:+90135168 MsG0780041370.01.T01:CDS
ATTGATCCTTATCACCATGC+AGG 0.531053 7:-90133852 None:intergenic
TTTGGAGCTATGGGTAGTAG+TGG 0.533197 7:-90131692 None:intergenic
TATCAGAGTGACAGTGGGAG+AGG 0.534863 7:+90133639 MsG0780041370.01.T01:CDS
TAAGGATCAATCTTCTCGTA+TGG 0.538960 7:+90133864 MsG0780041370.01.T01:CDS
CAGAAAAGAGCAAGGTTTGG+CGG 0.539484 7:-90133564 None:intergenic
CGAAACTATAGGTAGATTGA+CGG 0.541969 7:-90131901 None:intergenic
AGAGTGACAGTGGGAGAGGT+GGG 0.542580 7:+90133643 MsG0780041370.01.T01:CDS
AAAGCACAACCGGTAAAGCT+TGG 0.543465 7:-90133114 None:intergenic
AAGAGAAAGTTCGGATTCGA+AGG 0.543644 7:+90131866 MsG0780041370.01.T01:CDS
TCATCAACCTCCCAAAATGA+AGG 0.545123 7:+90135555 MsG0780041370.01.T01:CDS
ACTTTCTCCTTCGGCTTCGG+TGG 0.546367 7:-90132157 None:intergenic
ACCGAAGCCGAAGGAGAAAG+TGG 0.547284 7:+90132159 MsG0780041370.01.T01:CDS
ATCAATCAAACCAGCATCCA+CGG 0.550510 7:-90132323 None:intergenic
TCGTGTGCAAGCTCAAGTTA+GGG 0.551061 7:+90131785 MsG0780041370.01.T01:five_prime_UTR
TTACCCGAAATGATTGATCA+AGG 0.552029 7:+90133745 MsG0780041370.01.T01:CDS
GATGATAACGCCGGTGGTGG+TGG 0.552916 7:+90132061 MsG0780041370.01.T01:CDS
CGTTGTCTTCGAAATTGTCG+TGG 0.555230 7:-90131976 None:intergenic
CACTGTCACTCTGATAGGAT+CGG 0.557327 7:-90133632 None:intergenic
AATGCTCAGAGCAACTTACC+TGG 0.557941 7:+90133462 MsG0780041370.01.T01:CDS
GCTACTGATGTTGCCGCTCG+TGG 0.558152 7:+90133931 MsG0780041370.01.T01:CDS
CAGAGTGACAGTGGGAGAGG+TGG 0.564403 7:+90133642 MsG0780041370.01.T01:CDS
AACAGGCCGTGCTGGTGACA+AGG 0.564433 7:+90134035 MsG0780041370.01.T01:CDS
AAAAGGCAAAGGCAGAGGTG+GGG 0.567265 7:+90135368 MsG0780041370.01.T01:CDS
GTTGTTGTTCCCACCGCGTA+TGG 0.569328 7:-90131651 None:intergenic
TGGCAAAGGTGTGCGCGGAG+TGG 0.570105 7:+90135398 MsG0780041370.01.T01:CDS
CATTGTTGCAGAAAAGAGCA+AGG 0.570141 7:-90133572 None:intergenic
TGATGTGCCAATTCTCTGGT+AGG 0.570886 7:-90133271 None:intergenic
TCAATCTCAGTATGATCAAG+AGG 0.572016 7:-90132403 None:intergenic
CGTGTCTCTGCTGTCTATGG+TGG 0.576322 7:+90133337 MsG0780041370.01.T01:CDS
TTTAAAGTTGCTGCCCTGCA+TGG 0.578481 7:+90133838 MsG0780041370.01.T01:CDS
GGTAATTTCTCCAGAAGCCA+CGG 0.578486 7:-90133727 None:intergenic
GGTCCATCGTTGGTCAGATT+AGG 0.580274 7:+90133536 MsG0780041370.01.T01:CDS
CCATTAGATGCATTCATGGA+AGG 0.582173 7:+90132106 MsG0780041370.01.T01:CDS
GTTTGGCTATTCGGGTATCA+GGG 0.582805 7:+90132984 MsG0780041370.01.T01:CDS
GGATCAGCCTGAACTTCAGA+AGG 0.585907 7:+90133219 MsG0780041370.01.T01:CDS
TGATTTAGAGGATGATCCAA+TGG 0.586529 7:+90132198 MsG0780041370.01.T01:CDS
GGCGCCGCCACCGAAGCCGA+AGG 0.588262 7:+90132150 MsG0780041370.01.T01:CDS
AACTTACCTGGTGCTTGATG+AGG 0.590884 7:+90133474 MsG0780041370.01.T01:CDS
TGTTGTGTAGGTGGGAGAAA+AGG 0.593082 7:+90135351 MsG0780041370.01.T01:intron
CAGTTCAAAGAACTCAAGGC+AGG 0.593420 7:+90133376 MsG0780041370.01.T01:CDS
GCAGGTGGCAAAGGTGTGCG+CGG 0.596293 7:+90135393 MsG0780041370.01.T01:CDS
CATCGTTGGTCAGATTAGGC+CGG 0.596590 7:+90133540 MsG0780041370.01.T01:CDS
CGGTGGTGGTGGTTGTGAAG+AGG 0.599336 7:+90132072 MsG0780041370.01.T01:CDS
ACCAGAAACTCGACCATACG+CGG 0.600091 7:+90131638 None:intergenic
AGGATCGGAAAGGATTTCCC+TGG 0.600410 7:-90133617 None:intergenic
TTTACAGCAGCAGACCGACC+TGG 0.602830 7:-90135480 None:intergenic
GGCCGTGCTGGTGACAAGGA+CGG 0.606801 7:+90134039 MsG0780041370.01.T01:CDS
CTAGCTGGCTTTGTATCTGG+TGG 0.609199 7:+90135621 MsG0780041370.01.T01:CDS
AGCAATATCAAAGTTTACCA+CGG 0.609796 7:-90133977 None:intergenic
GATCAGCCTCATCAAGCACC+AGG 0.611022 7:-90133480 None:intergenic
ATTCAGTAACAATACAAGCA+TGG 0.612947 7:+90135578 MsG0780041370.01.T01:CDS
GGCAATTTCTCAGAATCAGA+AGG 0.613201 7:-90133706 None:intergenic
AGTAGCAATAAGCACATGGT+AGG 0.613217 7:-90133914 None:intergenic
CCTGAACTTCAGAAGGAGGA+AGG 0.614956 7:+90133226 MsG0780041370.01.T01:CDS
TTGATCCTTATCACCATGCA+GGG 0.615126 7:-90133851 None:intergenic
TGAACAGTTCAAAGAACTCA+AGG 0.617345 7:+90133372 MsG0780041370.01.T01:CDS
CTGATTCTGAGAAATTGCCG+TGG 0.618831 7:+90133710 MsG0780041370.01.T01:CDS
CGATCCTATCAGAGTGACAG+TGG 0.622612 7:+90133633 MsG0780041370.01.T01:CDS
GAAGGATTTAGGGTTGACGT+TGG 0.628406 7:+90132240 MsG0780041370.01.T01:CDS
CGGCCTAATCTGACCAACGA+TGG 0.632293 7:-90133539 None:intergenic
CATCTAACGCAGTTCCAGGT+CGG 0.632676 7:+90135466 MsG0780041370.01.T01:CDS
CATCAGTAGCAATAAGCACA+TGG 0.632724 7:-90133918 None:intergenic
CTTGATGTCAAGACCACGAG+CGG 0.633460 7:-90133944 None:intergenic
GGAGGAACGTAAAGACGTTG+AGG 0.634079 7:-90131938 None:intergenic
TTATGCTGCTGCTAAAGCCG+TGG 0.635330 7:+90132306 MsG0780041370.01.T01:CDS
CTCCGTCCTTGTCACCAGCA+CGG 0.638268 7:-90134041 None:intergenic
AAACGAGATGCAAGAAAAGG+AGG 0.638810 7:+90135171 MsG0780041370.01.T01:CDS
CAAAGTCGAAAAGTTAGCCA+GGG 0.638925 7:+90133600 MsG0780041370.01.T01:CDS
GATACAAAGCCAGCTAGTGT+TGG 0.641121 7:-90135615 None:intergenic
TGCTGGTCAGAATGTGTCCA+CGG 0.644595 7:+90134131 MsG0780041370.01.T01:CDS
TCAGCCTGAACTTCAGAAGG+AGG 0.650481 7:+90133222 MsG0780041370.01.T01:CDS
TCACTCTGATAGGATCGGAA+AGG 0.651428 7:-90133627 None:intergenic
GAAACTCGACCATACGCGGT+GGG 0.654017 7:+90131642 MsG0780041370.01.T01:five_prime_UTR
TGGATATGATTCTGATGAGG+AGG 0.658341 7:+90132282 MsG0780041370.01.T01:CDS
TGCTTCAATTTCATCCACAG+TGG 0.658468 7:-90133797 None:intergenic
CCGCAAGTAAGGTCCATCGT+TGG 0.658844 7:+90133526 MsG0780041370.01.T01:CDS
CATCAAGTCAATTAAAACCG+TGG 0.659638 7:+90133960 MsG0780041370.01.T01:CDS
GGCACATCAGATATATCTCG+AGG 0.663704 7:+90133285 MsG0780041370.01.T01:CDS
GCTTGGCATTGTATAGACGT+CGG 0.665885 7:-90133097 None:intergenic
GAGTGACAGTGGGAGAGGTG+GGG 0.667890 7:+90133644 MsG0780041370.01.T01:CDS
ATGGGTGCTATAAAGAAACA+AGG 0.668755 7:+90133064 MsG0780041370.01.T01:CDS
AGCAAGATCCATCAACTCCG+TGG 0.674249 7:-90134148 None:intergenic
GATCCTATCAGAGTGACAGT+GGG 0.686740 7:+90133634 MsG0780041370.01.T01:CDS
GGAACGTAAAGACGTTGAGG+AGG 0.696141 7:-90131935 None:intergenic
AACAACAACGATGATAACGC+CGG 0.697728 7:+90132052 MsG0780041370.01.T01:CDS
AGAAACTCGACCATACGCGG+TGG 0.699117 7:+90131641 MsG0780041370.01.T01:five_prime_UTR
TGCTGGATATGATTCTGATG+AGG 0.699809 7:+90132279 MsG0780041370.01.T01:CDS
GAAGCACAATTAGGTCAGAG+AGG 0.704987 7:+90133814 MsG0780041370.01.T01:CDS
CCAACGATGGACCTTACTTG+CGG 0.706917 7:-90133526 None:intergenic
AACAACGATGATAACGCCGG+TGG 0.714203 7:+90132055 MsG0780041370.01.T01:CDS
GTAGGTGGGAGAAAAGGCAA+AGG 0.721472 7:+90135357 MsG0780041370.01.T01:intron
ATTCATGGAAGGAATACACG+AGG 0.768621 7:+90132117 MsG0780041370.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATATATTAATGTATTCAA+TGG + Chr7:90134384-90134403 MsG0780041370.01.T01:intron 10.0%
!! AACATAAAAATAGAATTTCA+TGG - Chr7:90132493-90132512 None:intergenic 15.0%
!! TAAAGAAGTAAAGATTATTA+GGG - Chr7:90134890-90134909 None:intergenic 15.0%
!!! ATTTTACAGAAATTTAAATC+TGG + Chr7:90133889-90133908 MsG0780041370.01.T01:CDS 15.0%
!!! TTAGTACATATTTTTTGAAA+TGG + Chr7:90134361-90134380 MsG0780041370.01.T01:intron 15.0%
!! ACACGATAAATAAAATTTGA+GGG - Chr7:90131771-90131790 None:intergenic 20.0%
!! ATAAGATTTAGATATCTCTT+GGG + Chr7:90135088-90135107 MsG0780041370.01.T01:intron 20.0%
!! ATGAAGAAAAAATACTGTAT+AGG - Chr7:90134190-90134209 None:intergenic 20.0%
!! CTAAAGAAGTAAAGATTATT+AGG - Chr7:90134891-90134910 None:intergenic 20.0%
!! GATAGAAGTTATATATCTAT+AGG + Chr7:90134452-90134471 MsG0780041370.01.T01:intron 20.0%
!! TAGATATAAAGATGATTTAG+AGG + Chr7:90132186-90132205 MsG0780041370.01.T01:CDS 20.0%
!! TATAAGATTTAGATATCTCT+TGG + Chr7:90135087-90135106 MsG0780041370.01.T01:intron 20.0%
!! TATATTAATGTATTCAATGG+TGG + Chr7:90134387-90134406 MsG0780041370.01.T01:intron 20.0%
!! TCATAAAAATCCTTGTTAAA+AGG - Chr7:90132436-90132455 None:intergenic 20.0%
!! TGAAGAAAAAATACTGTATA+GGG - Chr7:90134189-90134208 None:intergenic 20.0%
!! TTGAGTTTGAATAAAAAGAA+GGG - Chr7:90131725-90131744 None:intergenic 20.0%
!!! AAAAAGAAGGGTTTTAATTT+TGG - Chr7:90131713-90131732 None:intergenic 20.0%
!!! ATCTATTTGATTGAACATTT+TGG + Chr7:90134635-90134654 MsG0780041370.01.T01:intron 20.0%
!!! ATTAAGTTGATTATTCAAAC+AGG - Chr7:90132606-90132625 None:intergenic 20.0%
!!! TGAACATTTTGGTAAAATTA+TGG + Chr7:90134646-90134665 MsG0780041370.01.T01:intron 20.0%
!!! TTAAGTTGATTATTCAAACA+GGG - Chr7:90132605-90132624 None:intergenic 20.0%
!!! TTTTAACAAGGATTTTTATG+AGG + Chr7:90132435-90132454 MsG0780041370.01.T01:CDS 20.0%
! ATAAAATTTGAGGGAGATAA+TGG - Chr7:90131762-90131781 None:intergenic 25.0%
! ATATGCTTTAGCAAATTTCT+TGG - Chr7:90133311-90133330 None:intergenic 25.0%
! CAAAACCAACAATAATCAAA+GGG - Chr7:90134264-90134283 None:intergenic 25.0%
! CACACGATAAATAAAATTTG+AGG - Chr7:90131772-90131791 None:intergenic 25.0%
! CTAAAATATATTTGACTGCT+TGG + Chr7:90134693-90134712 MsG0780041370.01.T01:intron 25.0%
! CTTTGATATTGCTAAAGATA+TGG + Chr7:90133987-90134006 MsG0780041370.01.T01:CDS 25.0%
! GTTGAGTTTGAATAAAAAGA+AGG - Chr7:90131726-90131745 None:intergenic 25.0%
! GTTTGGATGAGAATAAAATT+AGG + Chr7:90134736-90134755 MsG0780041370.01.T01:intron 25.0%
! TATAGTCATAACAAGTCAAA+TGG - Chr7:90134941-90134960 None:intergenic 25.0%
! TTATAACTCAAAAAGAAGCA+CGG + Chr7:90134076-90134095 MsG0780041370.01.T01:CDS 25.0%
! TTGGTAAAATTATGGTAGAA+TGG + Chr7:90134654-90134673 MsG0780041370.01.T01:intron 25.0%
!! GGTCGAACTAATATATTTTT+CGG - Chr7:90134920-90134939 None:intergenic 25.0%
!!! AAGAAATTTGCTAAAGCATA+TGG + Chr7:90133310-90133329 MsG0780041370.01.T01:CDS 25.0%
!!! ATTAGTTTTTGCTTCCAAAA+AGG + Chr7:90133774-90133793 MsG0780041370.01.T01:CDS 25.0%
!!! GCTTTTTTCAAAAGATGAAA+TGG + Chr7:90134533-90134552 MsG0780041370.01.T01:intron 25.0%
!!! TAAGTTGATTATTCAAACAG+GGG - Chr7:90132604-90132623 None:intergenic 25.0%
!!! TAGAATGGACTTGTTTTTTA+GGG + Chr7:90134669-90134688 MsG0780041370.01.T01:intron 25.0%
AACTGATTATAGGAAGAGTT+TGG + Chr7:90132967-90132986 MsG0780041370.01.T01:CDS 30.0%
AAGTAAAGATTATTAGGGAG+AGG - Chr7:90134885-90134904 None:intergenic 30.0%
AATTCCACTAGTCAAAATTC+TGG + Chr7:90135711-90135730 MsG0780041370.01.T01:CDS 30.0%
AGCAAGATGTAACTGATTAT+AGG + Chr7:90132957-90132976 MsG0780041370.01.T01:CDS 30.0%
AGCAATATCAAAGTTTACCA+CGG - Chr7:90133980-90133999 None:intergenic 30.0%
ATATCTATAGGTTTGACTGT+TGG + Chr7:90134464-90134483 MsG0780041370.01.T01:intron 30.0%
ATCACCTTGATCAATCATTT+CGG - Chr7:90133752-90133771 None:intergenic 30.0%
ATTCAGTAACAATACAAGCA+TGG + Chr7:90135578-90135597 MsG0780041370.01.T01:CDS 30.0%
CCAAAACCAACAATAATCAA+AGG - Chr7:90134265-90134284 None:intergenic 30.0%
GATAGACATGCTAAAAATGA+AGG + Chr7:90133432-90133451 MsG0780041370.01.T01:CDS 30.0%
GATGAAATTGAAGCACAATT+AGG + Chr7:90133805-90133824 MsG0780041370.01.T01:CDS 30.0%
GTAATATCAGTATGCTTGAT+TGG + Chr7:90135303-90135322 MsG0780041370.01.T01:intron 30.0%
GTTAAGTTACCTGATATTGA+AGG - Chr7:90132466-90132485 None:intergenic 30.0%
TAAAAACATTTGAGGACTGT+GGG + Chr7:90133026-90133045 MsG0780041370.01.T01:CDS 30.0%
TAAGCCAGTAAAAACATTTG+AGG + Chr7:90133018-90133037 MsG0780041370.01.T01:CDS 30.0%
TATTGAAAGAGCTAATGATG+TGG - Chr7:90132793-90132812 None:intergenic 30.0%
TTACATTTCTTGTGTTGTGT+AGG + Chr7:90135339-90135358 MsG0780041370.01.T01:intron 30.0%
TTCTTCTTGTCAAGAACAAT+AGG - Chr7:90132367-90132386 None:intergenic 30.0%
TTTATAGCACCCATAATTTG+TGG - Chr7:90133058-90133077 None:intergenic 30.0%
! GTTACTGAATCCTTCATTTT+GGG - Chr7:90135568-90135587 None:intergenic 30.0%
! TGATTATCAGCCTTTTAACA+AGG + Chr7:90132423-90132442 MsG0780041370.01.T01:CDS 30.0%
! TGTGTGTTGATATTTCACAT+GGG + Chr7:90132562-90132581 MsG0780041370.01.T01:intron 30.0%
! TGTTACTGAATCCTTCATTT+TGG - Chr7:90135569-90135588 None:intergenic 30.0%
! TTTTGCCTGTAAATAGCATA+GGG - Chr7:90134328-90134347 None:intergenic 30.0%
! TTTTTGCCTGTAAATAGCAT+AGG - Chr7:90134329-90134348 None:intergenic 30.0%
!! ATGTGGACATTAGTTGTTTT+CGG - Chr7:90132776-90132795 None:intergenic 30.0%
!! GTTGTTTTCATAAGCTATCT+TGG + Chr7:90132732-90132751 MsG0780041370.01.T01:intron 30.0%
!!! CCTTTGATTATTGTTGGTTT+TGG + Chr7:90134262-90134281 MsG0780041370.01.T01:intron 30.0%
!!! GGTTTTAATTTTGGAGCTAT+GGG - Chr7:90131704-90131723 None:intergenic 30.0%
!!! GTAGAATGGACTTGTTTTTT+AGG + Chr7:90134668-90134687 MsG0780041370.01.T01:intron 30.0%
!!! TCAAATGTTTTTACTGGCTT+AGG - Chr7:90133019-90133038 None:intergenic 30.0%
AAATAGCATAGGGGGATAAA+TGG - Chr7:90134318-90134337 None:intergenic 35.0%
AACGAAGCTACTCCTAAATT+GGG - Chr7:90135529-90135548 None:intergenic 35.0%
AATACACGAGGAGATGAAAT+CGG + Chr7:90132129-90132148 MsG0780041370.01.T01:CDS 35.0%
AATAGCATAGGGGGATAAAT+GGG - Chr7:90134317-90134336 None:intergenic 35.0%
AATTTGTCTTCTAATTCCGC+AGG + Chr7:90135131-90135150 MsG0780041370.01.T01:intron 35.0%
ATAGGAAGAGTTTGGCTATT+CGG + Chr7:90132975-90132994 MsG0780041370.01.T01:CDS 35.0%
ATTTATTCGTTCAGGAAGAC+AGG - Chr7:90134561-90134580 None:intergenic 35.0%
ATTTCTTGTGTTGTGTAGGT+GGG + Chr7:90135343-90135362 MsG0780041370.01.T01:intron 35.0%
CAACTTATAACATAGAGGCT+AGG - Chr7:90132880-90132899 None:intergenic 35.0%
CATCAAGTCAATTAAAACCG+TGG + Chr7:90133960-90133979 MsG0780041370.01.T01:CDS 35.0%
CGAAACTATAGGTAGATTGA+CGG - Chr7:90131904-90131923 None:intergenic 35.0%
CGTATCCCTTTGATTATTGT+TGG + Chr7:90134256-90134275 MsG0780041370.01.T01:intron 35.0%
CGTCACAATTCATATGTCAT+TGG + Chr7:90135026-90135045 MsG0780041370.01.T01:intron 35.0%
CTAGTGGAATTTACAGTTGA+AGG - Chr7:90135702-90135721 None:intergenic 35.0%
GCACTCAACTTATAACATAG+AGG - Chr7:90132885-90132904 None:intergenic 35.0%
GTAAAAACATTTGAGGACTG+TGG + Chr7:90133025-90133044 MsG0780041370.01.T01:CDS 35.0%
GTCTTCCTGAACGAATAAAT+GGG + Chr7:90134561-90134580 MsG0780041370.01.T01:intron 35.0%
GTTGTTTGATTGTTCTTCTC+TGG - Chr7:90132032-90132051 None:intergenic 35.0%
TAAGGATCAATCTTCTCGTA+TGG + Chr7:90133864-90133883 MsG0780041370.01.T01:CDS 35.0%
TATACAATGCCAAGCTTTAC+CGG + Chr7:90133105-90133124 MsG0780041370.01.T01:CDS 35.0%
TCAAAACGAGATGCAAGAAA+AGG + Chr7:90135168-90135187 MsG0780041370.01.T01:CDS 35.0%
TCAATCTCAGTATGATCAAG+AGG - Chr7:90132406-90132425 None:intergenic 35.0%
TCACCTTGATCAATCATTTC+GGG - Chr7:90133751-90133770 None:intergenic 35.0%
TGAACAGTTCAAAGAACTCA+AGG + Chr7:90133372-90133391 MsG0780041370.01.T01:CDS 35.0%
TGATTTAGAGGATGATCCAA+TGG + Chr7:90132198-90132217 MsG0780041370.01.T01:CDS 35.0%
TGTCTTCCTGAACGAATAAA+TGG + Chr7:90134560-90134579 MsG0780041370.01.T01:intron 35.0%
TTACCCGAAATGATTGATCA+AGG + Chr7:90133745-90133764 MsG0780041370.01.T01:CDS 35.0%
TTGAGATCGTTCGAAACTAT+AGG - Chr7:90131915-90131934 None:intergenic 35.0%
TTTCAATAAGCTGTCCCTAA+CGG + Chr7:90132805-90132824 MsG0780041370.01.T01:intron 35.0%
TTTGCCTGTAAATAGCATAG+GGG - Chr7:90134327-90134346 None:intergenic 35.0%
! ATGGGTGCTATAAAGAAACA+AGG + Chr7:90133064-90133083 MsG0780041370.01.T01:CDS 35.0%
! CTTTCTGGTAGAGATATCAT+TGG + Chr7:90133133-90133152 MsG0780041370.01.T01:CDS 35.0%
! GTGTGTGTTGATATTTCACA+TGG + Chr7:90132561-90132580 MsG0780041370.01.T01:intron 35.0%
! TTATTAGGGAGAGGTTTTTG+TGG - Chr7:90134876-90134895 None:intergenic 35.0%
! TTATTCAAACAGGGGTGTAA+TGG - Chr7:90132596-90132615 None:intergenic 35.0%
! TTTGTATCTGGTGGATCAAT+TGG + Chr7:90135630-90135649 MsG0780041370.01.T01:CDS 35.0%
!! AAGGTTAGTTTCTAAGAAGC+TGG + Chr7:90134412-90134431 MsG0780041370.01.T01:intron 35.0%
!! AATGTATTCAATGGTGGACA+AGG + Chr7:90134393-90134412 MsG0780041370.01.T01:intron 35.0%
!! CAAAATTCTGGAGTAAATCC+TGG + Chr7:90135723-90135742 MsG0780041370.01.T01:CDS 35.0%
!! CAGTCCTCAAATGTTTTTAC+TGG - Chr7:90133025-90133044 None:intergenic 35.0%
!! TGAGGGAGATAATGGAATTT+AGG - Chr7:90131754-90131773 None:intergenic 35.0%
!!! ATCCAATGGAGAGTTTTTTG+AGG + Chr7:90132212-90132231 MsG0780041370.01.T01:CDS 35.0%
!!! GGGTTTTAATTTTGGAGCTA+TGG - Chr7:90131705-90131724 None:intergenic 35.0%
!!! TACTCCAGAATTTTGACTAG+TGG - Chr7:90135718-90135737 None:intergenic 35.0%
!!! TCCAATGGAGAGTTTTTTGA+GGG + Chr7:90132213-90132232 MsG0780041370.01.T01:CDS 35.0%
AAACGAGATGCAAGAAAAGG+AGG + Chr7:90135171-90135190 MsG0780041370.01.T01:CDS 40.0%
AACAGCTCGATTAAAACCAG+AGG - Chr7:90134797-90134816 None:intergenic 40.0%
AAGAGAAAGTTCGGATTCGA+AGG + Chr7:90131866-90131885 MsG0780041370.01.T01:CDS 40.0%
AAGCTATCTTGGAGAGCTTA+TGG + Chr7:90132743-90132762 MsG0780041370.01.T01:intron 40.0%
AAGTTCGGATTCGAAGGTTT+CGG + Chr7:90131872-90131891 MsG0780041370.01.T01:CDS 40.0%
AATAAGAGACCAACACTAGC+TGG + Chr7:90135606-90135625 MsG0780041370.01.T01:CDS 40.0%
ACAGCTCGATTAAAACCAGA+GGG - Chr7:90134796-90134815 None:intergenic 40.0%
AGCATGTCTATCAATCTTCC+AGG - Chr7:90133424-90133443 None:intergenic 40.0%
AGTAGCAATAAGCACATGGT+AGG - Chr7:90133917-90133936 None:intergenic 40.0%
ATCAATCAAACCAGCATCCA+CGG - Chr7:90132326-90132345 None:intergenic 40.0%
ATCATTGGCATAGCGAAAAC+TGG + Chr7:90133148-90133167 MsG0780041370.01.T01:CDS 40.0%
ATTCATGATGACAACCCAAG+TGG - Chr7:90134853-90134872 None:intergenic 40.0%
ATTCATGGAAGGAATACACG+AGG + Chr7:90132117-90132136 MsG0780041370.01.T01:CDS 40.0%
ATTGATCCTTATCACCATGC+AGG - Chr7:90133855-90133874 None:intergenic 40.0%
CAAAGTCGAAAAGTTAGCCA+GGG + Chr7:90133600-90133619 MsG0780041370.01.T01:CDS 40.0%
CAACGAAGCTACTCCTAAAT+TGG - Chr7:90135530-90135549 None:intergenic 40.0%
CAGGAATGATGTCCCAATTT+AGG + Chr7:90135514-90135533 MsG0780041370.01.T01:CDS 40.0%
CATCAGTAGCAATAAGCACA+TGG - Chr7:90133921-90133940 None:intergenic 40.0%
CATCGTACTCGATGTTATCA+AGG - Chr7:90132003-90132022 None:intergenic 40.0%
CATTGTTGCAGAAAAGAGCA+AGG - Chr7:90133575-90133594 None:intergenic 40.0%
CATTTCTTGTGTTGTGTAGG+TGG + Chr7:90135342-90135361 MsG0780041370.01.T01:intron 40.0%
CCATTAGATGCATTCATGGA+AGG + Chr7:90132106-90132125 MsG0780041370.01.T01:CDS 40.0%
CCTTCCATGAATGCATCTAA+TGG - Chr7:90132109-90132128 None:intergenic 40.0%
CGATCCATTAGATGCATTCA+TGG + Chr7:90132102-90132121 MsG0780041370.01.T01:CDS 40.0%
CGTGCTAACAGGAAATTGTT+TGG + Chr7:90134719-90134738 MsG0780041370.01.T01:intron 40.0%
CTATCTTCCACTTTCTCCTT+CGG - Chr7:90132169-90132188 None:intergenic 40.0%
GAATTTACAGTTGAAGGAGC+AGG - Chr7:90135696-90135715 None:intergenic 40.0%
GAGATAAGGACACAGCTTAT+TGG - Chr7:90135269-90135288 None:intergenic 40.0%
GAGATGTCGAAGAGAAAGTT+CGG + Chr7:90131857-90131876 MsG0780041370.01.T01:exon 40.0%
GCTGATCGAATGTTTGATCT+TGG + Chr7:90133496-90133515 MsG0780041370.01.T01:CDS 40.0%
GGCAATTTCTCAGAATCAGA+AGG - Chr7:90133709-90133728 None:intergenic 40.0%
GTATGATCAAGAGGAGCAAT+AGG - Chr7:90132397-90132416 None:intergenic 40.0%
GTTAATAGCTTAGTTGCTGC+TGG + Chr7:90134114-90134133 MsG0780041370.01.T01:CDS 40.0%
TAGGAAGAGTTTGGCTATTC+GGG + Chr7:90132976-90132995 MsG0780041370.01.T01:CDS 40.0%
TATCTGATGTGCCAATTCTC+TGG - Chr7:90133278-90133297 None:intergenic 40.0%
TCATCAACCTCCCAAAATGA+AGG + Chr7:90135555-90135574 MsG0780041370.01.T01:CDS 40.0%
TCCATGATATGCACGATCAT+AGG - Chr7:90133202-90133221 None:intergenic 40.0%
TCCTATGATCGTGCATATCA+TGG + Chr7:90133198-90133217 MsG0780041370.01.T01:CDS 40.0%
TGCTGGATATGATTCTGATG+AGG + Chr7:90132279-90132298 MsG0780041370.01.T01:CDS 40.0%
TGCTTCAATTTCATCCACAG+TGG - Chr7:90133800-90133819 None:intergenic 40.0%
TGGATATGATTCTGATGAGG+AGG + Chr7:90132282-90132301 MsG0780041370.01.T01:CDS 40.0%
TTGATCCTTATCACCATGCA+GGG - Chr7:90133854-90133873 None:intergenic 40.0%
TTGCAGAAAAGAGCAAGGTT+TGG - Chr7:90133570-90133589 None:intergenic 40.0%
TTGCCTGTAAATAGCATAGG+GGG - Chr7:90134326-90134345 None:intergenic 40.0%
! AACAACAACGATGATAACGC+CGG + Chr7:90132052-90132071 MsG0780041370.01.T01:CDS 40.0%
! ACTGAATCCTTCATTTTGGG+AGG - Chr7:90135565-90135584 None:intergenic 40.0%
! CTGACGATGTTTTATGATGC+TGG + Chr7:90135064-90135083 MsG0780041370.01.T01:intron 40.0%
! GGGTTTGCTCCACAAATTAT+GGG + Chr7:90133046-90133065 MsG0780041370.01.T01:CDS 40.0%
! GTGTTTTGTGTGCTTGATAC+AGG + Chr7:90132926-90132945 MsG0780041370.01.T01:intron 40.0%
! GTTGATGGATCTTGCTATGA+AGG + Chr7:90134155-90134174 MsG0780041370.01.T01:CDS 40.0%
! TATCCCCCTATGCTATTTAC+AGG + Chr7:90134320-90134339 MsG0780041370.01.T01:intron 40.0%
! TGGGTTTGCTCCACAAATTA+TGG + Chr7:90133045-90133064 MsG0780041370.01.T01:CDS 40.0%
AAAGCACAACCGGTAAAGCT+TGG - Chr7:90133117-90133136 None:intergenic 45.0%
AACTTACCTGGTGCTTGATG+AGG + Chr7:90133474-90133493 MsG0780041370.01.T01:CDS 45.0%
AAGCACACTTGTGAACCGTT+AGG - Chr7:90132823-90132842 None:intergenic 45.0%
AATGCTCAGAGCAACTTACC+TGG + Chr7:90133462-90133481 MsG0780041370.01.T01:CDS 45.0%
AGCACACTTGTGAACCGTTA+GGG - Chr7:90132822-90132841 None:intergenic 45.0%
AGTTTGGCTATTCGGGTATC+AGG + Chr7:90132983-90133002 MsG0780041370.01.T01:CDS 45.0%
ATACGTGTCTCTGCTGTCTA+TGG + Chr7:90133334-90133353 MsG0780041370.01.T01:CDS 45.0%
ATCGTGTGCAAGCTCAAGTT+AGG + Chr7:90131784-90131803 MsG0780041370.01.T01:five_prime_UTR 45.0%
ATGTGCACCTACCAGAGAAT+TGG + Chr7:90133264-90133283 MsG0780041370.01.T01:CDS 45.0%
ATTAAAACCAGAGGGGAGAC+AGG - Chr7:90134788-90134807 None:intergenic 45.0%
CACAGCCCATTTATTCGTTC+AGG - Chr7:90134569-90134588 None:intergenic 45.0%
CACTGTCACTCTGATAGGAT+CGG - Chr7:90133635-90133654 None:intergenic 45.0%
CAGAAAAGAGCAAGGTTTGG+CGG - Chr7:90133567-90133586 None:intergenic 45.0%
CAGCTCGATTAAAACCAGAG+GGG - Chr7:90134795-90134814 None:intergenic 45.0%
CAGTTCAAAGAACTCAAGGC+AGG + Chr7:90133376-90133395 MsG0780041370.01.T01:CDS 45.0%
CGTTGTCTTCGAAATTGTCG+TGG - Chr7:90131979-90131998 None:intergenic 45.0%
GAAGCACAATTAGGTCAGAG+AGG + Chr7:90133814-90133833 MsG0780041370.01.T01:CDS 45.0%
GACATGCATGTTCATCGCAT+TGG + Chr7:90134009-90134028 MsG0780041370.01.T01:CDS 45.0%
GACTCTACTGTGCAGAGATA+AGG - Chr7:90135283-90135302 None:intergenic 45.0%
GAGATGCAAGAAAAGGAGGT+AGG + Chr7:90135175-90135194 MsG0780041370.01.T01:intron 45.0%
GAGGAGTCACCTTCAATATC+AGG + Chr7:90132454-90132473 MsG0780041370.01.T01:CDS 45.0%
GATACAAAGCCAGCTAGTGT+TGG - Chr7:90135618-90135637 None:intergenic 45.0%
GATCCTATCAGAGTGACAGT+GGG + Chr7:90133634-90133653 MsG0780041370.01.T01:CDS 45.0%
GCAAAGTCGAAAAGTTAGCC+AGG + Chr7:90133599-90133618 MsG0780041370.01.T01:CDS 45.0%
GCCCTCAAAAAACTCTCCAT+TGG - Chr7:90132217-90132236 None:intergenic 45.0%
GCTGTAAATTCTCTGCGAAC+AGG + Chr7:90135495-90135514 MsG0780041370.01.T01:CDS 45.0%
GCTTGGCATTGTATAGACGT+CGG - Chr7:90133100-90133119 None:intergenic 45.0%
GGCACATCAGATATATCTCG+AGG + Chr7:90133285-90133304 MsG0780041370.01.T01:CDS 45.0%
GGTAATTTCTCCAGAAGCCA+CGG - Chr7:90133730-90133749 None:intergenic 45.0%
GGTGCACATATCACTCCTAT+AGG - Chr7:90133253-90133272 None:intergenic 45.0%
GTTCACAAGTGTGCTTGTGT+CGG + Chr7:90132827-90132846 MsG0780041370.01.T01:intron 45.0%
GTTCATCGCATTGGAAGAAC+AGG + Chr7:90134018-90134037 MsG0780041370.01.T01:CDS 45.0%
GTTGAGTGCGATTGAACGTT+TGG + Chr7:90132896-90132915 MsG0780041370.01.T01:intron 45.0%
GTTTGGCTATTCGGGTATCA+GGG + Chr7:90132984-90133003 MsG0780041370.01.T01:CDS 45.0%
TCACTCTGATAGGATCGGAA+AGG - Chr7:90133630-90133649 None:intergenic 45.0%
TCGTGTGCAAGCTCAAGTTA+GGG + Chr7:90131785-90131804 MsG0780041370.01.T01:five_prime_UTR 45.0%
TGAGGGCGAAGAAGGATTTA+GGG + Chr7:90132230-90132249 MsG0780041370.01.T01:CDS 45.0%
TGATGTGCCAATTCTCTGGT+AGG - Chr7:90133274-90133293 None:intergenic 45.0%
TGTCTTCTAATTCCGCAGGA+CGG + Chr7:90135135-90135154 MsG0780041370.01.T01:intron 45.0%
TGTTGTGTAGGTGGGAGAAA+AGG + Chr7:90135351-90135370 MsG0780041370.01.T01:intron 45.0%
TTGAGGGCGAAGAAGGATTT+AGG + Chr7:90132229-90132248 MsG0780041370.01.T01:CDS 45.0%
TTGGATTTGAGCCGCAAGTA+AGG + Chr7:90133515-90133534 MsG0780041370.01.T01:CDS 45.0%
! CAAAAAGAAGCACGGTTTGC+TGG + Chr7:90134084-90134103 MsG0780041370.01.T01:CDS 45.0%
! CATGCTAAAAATGAAGGCGC+TGG + Chr7:90133438-90133457 MsG0780041370.01.T01:CDS 45.0%
! CTGATTCTGAGAAATTGCCG+TGG + Chr7:90133710-90133729 MsG0780041370.01.T01:CDS 45.0%
! GAAGGATTTAGGGTTGACGT+TGG + Chr7:90132240-90132259 MsG0780041370.01.T01:CDS 45.0%
! GCTAACTTTTCGACTTTGCG+AGG - Chr7:90133598-90133617 None:intergenic 45.0%
! GTATCTGGTGGATCAATTGG+CGG + Chr7:90135633-90135652 MsG0780041370.01.T01:CDS 45.0%
! TCGTGGCTTTTACGAGATGA+AGG - Chr7:90131962-90131981 None:intergenic 45.0%
! TCTCTACCAGAAAGCACAAC+CGG - Chr7:90133127-90133146 None:intergenic 45.0%
! TGGCTTTTACGAGATGAAGG+AGG - Chr7:90131959-90131978 None:intergenic 45.0%
! TTCATCCACAGTGGCCTTTT+TGG - Chr7:90133791-90133810 None:intergenic 45.0%
! TTTAAAGTTGCTGCCCTGCA+TGG + Chr7:90133838-90133857 MsG0780041370.01.T01:CDS 45.0%
! TTTCTACAGTGCTGCCACTT+GGG + Chr7:90134836-90134855 MsG0780041370.01.T01:intron 45.0%
! TTTGGAGCTATGGGTAGTAG+TGG - Chr7:90131695-90131714 None:intergenic 45.0%
! TTTTCTACAGTGCTGCCACT+TGG + Chr7:90134835-90134854 MsG0780041370.01.T01:intron 45.0%
!! ACACTAGCTGGCTTTGTATC+TGG + Chr7:90135618-90135637 MsG0780041370.01.T01:CDS 45.0%
!! AGCTGTTGACTCTGTCATTC+TGG + Chr7:90134810-90134829 MsG0780041370.01.T01:intron 45.0%
!!! GAGTTTTTTGAGGGCGAAGA+AGG + Chr7:90132222-90132241 MsG0780041370.01.T01:CDS 45.0%
AAAAGGCAAAGGCAGAGGTG+GGG + Chr7:90135368-90135387 MsG0780041370.01.T01:CDS 50.0%
AATAAGTCCTGTCTCCCCTC+TGG + Chr7:90134778-90134797 MsG0780041370.01.T01:intron 50.0%
AGAAAAGGCAAAGGCAGAGG+TGG + Chr7:90135366-90135385 MsG0780041370.01.T01:CDS 50.0%
AGCAAGATCCATCAACTCCG+TGG - Chr7:90134151-90134170 None:intergenic 50.0%
AGGATCGGAAAGGATTTCCC+TGG - Chr7:90133620-90133639 None:intergenic 50.0%
CAGAAGGAGGAAGGTCCTAT+AGG + Chr7:90133235-90133254 MsG0780041370.01.T01:CDS 50.0%
CATCGTTGGTCAGATTAGGC+CGG + Chr7:90133540-90133559 MsG0780041370.01.T01:CDS 50.0%
CATCTAACGCAGTTCCAGGT+CGG + Chr7:90135466-90135485 MsG0780041370.01.T01:CDS 50.0%
CCAACGATGGACCTTACTTG+CGG - Chr7:90133529-90133548 None:intergenic 50.0%
CCTGAACTTCAGAAGGAGGA+AGG + Chr7:90133226-90133245 MsG0780041370.01.T01:CDS 50.0%
CGATCCTATCAGAGTGACAG+TGG + Chr7:90133633-90133652 MsG0780041370.01.T01:CDS 50.0%
CTGCTTGGTTTCGTGCTAAC+AGG + Chr7:90134708-90134727 MsG0780041370.01.T01:intron 50.0%
CTGGTCAGAACAACACGAAC+AGG + Chr7:90135742-90135761 MsG0780041370.01.T01:CDS 50.0%
CTTGATGTCAAGACCACGAG+CGG - Chr7:90133947-90133966 None:intergenic 50.0%
GAAAAGGCAAAGGCAGAGGT+GGG + Chr7:90135367-90135386 MsG0780041370.01.T01:CDS 50.0%
GAATGTGTCCACGGAGTTGA+TGG + Chr7:90134140-90134159 MsG0780041370.01.T01:CDS 50.0%
GAGATAGTTGTTGCTACGCC+TGG + Chr7:90133403-90133422 MsG0780041370.01.T01:CDS 50.0%
GCATCATCTAACGCAGTTCC+AGG + Chr7:90135462-90135481 MsG0780041370.01.T01:CDS 50.0%
GGAACGTAAAGACGTTGAGG+AGG - Chr7:90131938-90131957 None:intergenic 50.0%
GGAGGAACGTAAAGACGTTG+AGG - Chr7:90131941-90131960 None:intergenic 50.0%
GGATCAGCCTGAACTTCAGA+AGG + Chr7:90133219-90133238 MsG0780041370.01.T01:CDS 50.0%
GGTCCATCGTTGGTCAGATT+AGG + Chr7:90133536-90133555 MsG0780041370.01.T01:CDS 50.0%
GTAGGTGGGAGAAAAGGCAA+AGG + Chr7:90135357-90135376 MsG0780041370.01.T01:intron 50.0%
GTCTTCTAATTCCGCAGGAC+GGG + Chr7:90135136-90135155 MsG0780041370.01.T01:intron 50.0%
TATCAGAGTGACAGTGGGAG+AGG + Chr7:90133639-90133658 MsG0780041370.01.T01:CDS 50.0%
TCAGCCTGAACTTCAGAAGG+AGG + Chr7:90133222-90133241 MsG0780041370.01.T01:CDS 50.0%
TCCACTTTCTCCTTCGGCTT+CGG - Chr7:90132163-90132182 None:intergenic 50.0%
TCTCCCACTGTCACTCTGAT+AGG - Chr7:90133640-90133659 None:intergenic 50.0%
TGAGAAATTGCCGTGGCTTC+TGG + Chr7:90133717-90133736 MsG0780041370.01.T01:CDS 50.0%
TGCTGGTCAGAATGTGTCCA+CGG + Chr7:90134131-90134150 MsG0780041370.01.T01:CDS 50.0%
TGCTTCCAAAAAGGCCACTG+TGG + Chr7:90133783-90133802 MsG0780041370.01.T01:CDS 50.0%
TTATGCTGCTGCTAAAGCCG+TGG + Chr7:90132306-90132325 MsG0780041370.01.T01:CDS 50.0%
! AACAACGATGATAACGCCGG+TGG + Chr7:90132055-90132074 MsG0780041370.01.T01:CDS 50.0%
! CTGTTCGTGTTGTTCTGACC+AGG - Chr7:90135744-90135763 None:intergenic 50.0%
! GCTTTACCGGTTGTGCTTTC+TGG + Chr7:90133118-90133137 MsG0780041370.01.T01:CDS 50.0%
! GGCATAGCGAAAACTGGTTC+TGG + Chr7:90133154-90133173 MsG0780041370.01.T01:CDS 50.0%
! TTTAGGGTTGACGTTGGCGT+CGG + Chr7:90132246-90132265 MsG0780041370.01.T01:CDS 50.0%
!! AGCACGGTTTGCTGGTGAAT+TGG + Chr7:90134092-90134111 MsG0780041370.01.T01:CDS 50.0%
!! CCTTCCTCCTTCTGAAGTTC+AGG - Chr7:90133229-90133248 None:intergenic 50.0%
!! CTAGCTGGCTTTGTATCTGG+TGG + Chr7:90135621-90135640 MsG0780041370.01.T01:CDS 50.0%
!!! GTGGATTTTGGCTTGGGCAT+TGG + Chr7:90135417-90135436 MsG0780041370.01.T01:CDS 50.0%
AAAGGCAAAGGCAGAGGTGG+GGG + Chr7:90135369-90135388 MsG0780041370.01.T01:CDS 55.0%
AAGAGCAAGGTTTGGCGGTC+CGG - Chr7:90133562-90133581 None:intergenic 55.0%
ACCGAAGCCGAAGGAGAAAG+TGG + Chr7:90132159-90132178 MsG0780041370.01.T01:CDS 55.0%
ACTTTCTCCTTCGGCTTCGG+TGG - Chr7:90132160-90132179 None:intergenic 55.0%
AGAAACTCGACCATACGCGG+TGG + Chr7:90131641-90131660 MsG0780041370.01.T01:five_prime_UTR 55.0%
AGAGTGACAGTGGGAGAGGT+GGG + Chr7:90133643-90133662 MsG0780041370.01.T01:CDS 55.0%
ATTGGAAGAACAGGCCGTGC+TGG + Chr7:90134027-90134046 MsG0780041370.01.T01:CDS 55.0%
CCGCAAGTAAGGTCCATCGT+TGG + Chr7:90133526-90133545 MsG0780041370.01.T01:CDS 55.0%
CGGCCTAATCTGACCAACGA+TGG - Chr7:90133542-90133561 None:intergenic 55.0%
CGTGTCTCTGCTGTCTATGG+TGG + Chr7:90133337-90133356 MsG0780041370.01.T01:CDS 55.0%
CTCTTCACAACCACCACCAC+CGG - Chr7:90132074-90132093 None:intergenic 55.0%
GAAACTCGACCATACGCGGT+GGG + Chr7:90131642-90131661 MsG0780041370.01.T01:five_prime_UTR 55.0%
GATCAGCCTCATCAAGCACC+AGG - Chr7:90133483-90133502 None:intergenic 55.0%
GGGAGAAAAGGCAAAGGCAG+AGG + Chr7:90135363-90135382 MsG0780041370.01.T01:CDS 55.0%
TGCTGCCCTGCATGGTGATA+AGG + Chr7:90133846-90133865 MsG0780041370.01.T01:CDS 55.0%
TTTACAGCAGCAGACCGACC+TGG - Chr7:90135483-90135502 None:intergenic 55.0%
! AACGATGATAACGCCGGTGG+TGG + Chr7:90132058-90132077 MsG0780041370.01.T01:CDS 55.0%
! GTTGTTGTTCCCACCGCGTA+TGG - Chr7:90131654-90131673 None:intergenic 55.0%
!!! CGCGGAGTGGATTTTGGCTT+GGG + Chr7:90135411-90135430 MsG0780041370.01.T01:CDS 55.0%
CAGAGTGACAGTGGGAGAGG+TGG + Chr7:90133642-90133661 MsG0780041370.01.T01:CDS 60.0%
CTCCGTCCTTGTCACCAGCA+CGG - Chr7:90134044-90134063 None:intergenic 60.0%
GACCTGAATCTCCCGTCCTG+CGG - Chr7:90135150-90135169 None:intergenic 60.0%
GAGTGACAGTGGGAGAGGTG+GGG + Chr7:90133644-90133663 MsG0780041370.01.T01:CDS 60.0%
GCTACTGATGTTGCCGCTCG+TGG + Chr7:90133931-90133950 MsG0780041370.01.T01:CDS 60.0%
GCTGCTAAAGCCGTGGATGC+TGG + Chr7:90132313-90132332 MsG0780041370.01.T01:CDS 60.0%
TTCCGCAGGACGGGAGATTC+AGG + Chr7:90135145-90135164 MsG0780041370.01.T01:intron 60.0%
TTCTCCTTCGGCTTCGGTGG+CGG - Chr7:90132157-90132176 None:intergenic 60.0%
! AACAGGCCGTGCTGGTGACA+AGG + Chr7:90134035-90134054 MsG0780041370.01.T01:CDS 60.0%
! GATGATAACGCCGGTGGTGG+TGG + Chr7:90132061-90132080 MsG0780041370.01.T01:CDS 60.0%
!! CGGTGGTGGTGGTTGTGAAG+AGG + Chr7:90132072-90132091 MsG0780041370.01.T01:CDS 60.0%
!! GGTGTGCGCGGAGTGGATTT+TGG + Chr7:90135405-90135424 MsG0780041370.01.T01:CDS 60.0%
!!! GCGCGGAGTGGATTTTGGCT+TGG + Chr7:90135410-90135429 MsG0780041370.01.T01:CDS 60.0%
GACAGTGGGAGAGGTGGGGA+TGG + Chr7:90133648-90133667 MsG0780041370.01.T01:CDS 65.0%
GCGTCGGATGCGTTGCATGC+TGG + Chr7:90132262-90132281 MsG0780041370.01.T01:CDS 65.0%
! AAAGGCAGAGGTGGGGGTGC+AGG + Chr7:90135375-90135394 MsG0780041370.01.T01:CDS 65.0%
! GCAGGTGGCAAAGGTGTGCG+CGG + Chr7:90135393-90135412 MsG0780041370.01.T01:CDS 65.0%
! GGCCGTGCTGGTGACAAGGA+CGG + Chr7:90134039-90134058 MsG0780041370.01.T01:CDS 65.0%
! TGGCAAAGGTGTGCGCGGAG+TGG + Chr7:90135398-90135417 MsG0780041370.01.T01:CDS 65.0%
! GGTGGGGGTGCAGGTGGCAA+AGG + Chr7:90135384-90135403 MsG0780041370.01.T01:CDS 70.0%
! GGCAGAGGTGGGGGTGCAGG+TGG + Chr7:90135378-90135397 MsG0780041370.01.T01:CDS 75.0%
! GGCGCCGCCACCGAAGCCGA+AGG + Chr7:90132150-90132169 MsG0780041370.01.T01:CDS 80.0%
Chromosome Type Strat End Strand Name
Chr7 gene 90131640 90135776 90131640 ID=MsG0780041370.01;Name=MsG0780041370.01
Chr7 mRNA 90131640 90135776 90131640 ID=MsG0780041370.01.T01;Parent=MsG0780041370.01;Name=MsG0780041370.01.T01;_AED=0.45;_eAED=0.46;_QI=220|1|0.75|1|1|1|4|0|766
Chr7 exon 90131640 90132475 90131640 ID=MsG0780041370.01.T01:exon:3683;Parent=MsG0780041370.01.T01
Chr7 exon 90132948 90134176 90132948 ID=MsG0780041370.01.T01:exon:3684;Parent=MsG0780041370.01.T01
Chr7 exon 90135153 90135192 90135153 ID=MsG0780041370.01.T01:exon:3685;Parent=MsG0780041370.01.T01
Chr7 exon 90135361 90135776 90135361 ID=MsG0780041370.01.T01:exon:3686;Parent=MsG0780041370.01.T01
Chr7 five_prime_UTR 90131640 90131859 90131640 ID=MsG0780041370.01.T01:five_prime_utr;Parent=MsG0780041370.01.T01
Chr7 CDS 90131860 90132475 90131860 ID=MsG0780041370.01.T01:cds;Parent=MsG0780041370.01.T01
Chr7 CDS 90132948 90134176 90132948 ID=MsG0780041370.01.T01:cds;Parent=MsG0780041370.01.T01
Chr7 CDS 90135153 90135192 90135153 ID=MsG0780041370.01.T01:cds;Parent=MsG0780041370.01.T01
Chr7 CDS 90135361 90135776 90135361 ID=MsG0780041370.01.T01:cds;Parent=MsG0780041370.01.T01
Gene Sequence

>MsG0780041370.01.T01

ATGTCGAAGAGAAAGTTCGGATTCGAAGGTTTCGGCATAAACCGTCAATCTACCTATAGTTTCGAACGATCTCAACCTCCTCAACGTCTTTACGTTCCTCCTTCATCTCGTAAAAGCCACGACAATTTCGAAGACAACGACCTTGATAACATCGAGTACGATGATGATTCCAGAGAAGAACAATCAAACAACAACAACAACGATGATAACGCCGGTGGTGGTGGTTGTGAAGAGGATGAAATCGATCCATTAGATGCATTCATGGAAGGAATACACGAGGAGATGAAATCGGCGCCGCCACCGAAGCCGAAGGAGAAAGTGGAAGATAGATATAAAGATGATTTAGAGGATGATCCAATGGAGAGTTTTTTGAGGGCGAAGAAGGATTTAGGGTTGACGTTGGCGTCGGATGCGTTGCATGCTGGATATGATTCTGATGAGGAGGTTTATGCTGCTGCTAAAGCCGTGGATGCTGGTTTGATTGATTATGATTCTGATGATAATCCTATTGTTCTTGACAAGAAGAAAATTGAACCTATTGCTCCTCTTGATCATACTGAGATTGATTATCAGCCTTTTAACAAGGATTTTTATGAGGAGTCACCTTCAATATCAGGTATGAGTGAGCAAGATGTAACTGATTATAGGAAGAGTTTGGCTATTCGGGTATCAGGGTTTGAAGTTCCTAAGCCAGTAAAAACATTTGAGGACTGTGGGTTTGCTCCACAAATTATGGGTGCTATAAAGAAACAAGGTTATGAGAAGCCGACGTCTATACAATGCCAAGCTTTACCGGTTGTGCTTTCTGGTAGAGATATCATTGGCATAGCGAAAACTGGTTCTGGTAAAACTGCTGCTTTTGTGCTTCCTATGATCGTGCATATCATGGATCAGCCTGAACTTCAGAAGGAGGAAGGTCCTATAGGAGTGATATGTGCACCTACCAGAGAATTGGCACATCAGATATATCTCGAGGCCAAGAAATTTGCTAAAGCATATGGAATACGTGTCTCTGCTGTCTATGGTGGAATGTCAAAACTTGAACAGTTCAAAGAACTCAAGGCAGGCTGTGAGATAGTTGTTGCTACGCCTGGAAGATTGATAGACATGCTAAAAATGAAGGCGCTGGCAATGCTCAGAGCAACTTACCTGGTGCTTGATGAGGCTGATCGAATGTTTGATCTTGGATTTGAGCCGCAAGTAAGGTCCATCGTTGGTCAGATTAGGCCGGACCGCCAAACCTTGCTCTTTTCTGCAACAATGCCTCGCAAAGTCGAAAAGTTAGCCAGGGAAATCCTTTCCGATCCTATCAGAGTGACAGTGGGAGAGGTGGGGATGGCAAATGAAGATATTACTCAAGTTGTTCAAGTAATTCCTTCTGATTCTGAGAAATTGCCGTGGCTTCTGGAGAAATTACCCGAAATGATTGATCAAGGTGATACATTAGTTTTTGCTTCCAAAAAGGCCACTGTGGATGAAATTGAAGCACAATTAGGTCAGAGAGGCTTTAAAGTTGCTGCCCTGCATGGTGATAAGGATCAATCTTCTCGTATGGATATTTTACAGAAATTTAAATCTGGCACCTACCATGTGCTTATTGCTACTGATGTTGCCGCTCGTGGTCTTGACATCAAGTCAATTAAAACCGTGGTAAACTTTGATATTGCTAAAGATATGGACATGCATGTTCATCGCATTGGAAGAACAGGCCGTGCTGGTGACAAGGACGGAGTTGCATACACTCTTATAACTCAAAAAGAAGCACGGTTTGCTGGTGAATTGGTTAATAGCTTAGTTGCTGCTGGTCAGAATGTGTCCACGGAGTTGATGGATCTTGCTATGAAGGACGGGAGATTCAGGTCAAAACGAGATGCAAGAAAAGGAGGTGGGAGAAAAGGCAAAGGCAGAGGTGGGGGTGCAGGTGGCAAAGGTGTGCGCGGAGTGGATTTTGGCTTGGGCATTGGATATAGTACAGAGTCAAACAATGCATCATCTAACGCAGTTCCAGGTCGGTCTGCTGCTGTAAATTCTCTGCGAACAGGAATGATGTCCCAATTTAGGAGTAGCTTCGTTGCTGCATCATCAACCTCCCAAAATGAAGGATTCAGTAACAATACAAGCATGGCTGTTAATAAGAGACCAACACTAGCTGGCTTTGTATCTGGTGGATCAATTGGCGGCGATATAAATACTCATCAGCAAACTGCTTCATACAATCCTGCTCCTTCAACTGTAAATTCCACTAGTCAAAATTCTGGAGTAAATCCTGGTCAGAACAACACGAACAGGTCACTTTTCTAA

Protein sequence

>MsG0780041370.01.T01

MSKRKFGFEGFGINRQSTYSFERSQPPQRLYVPPSSRKSHDNFEDNDLDNIEYDDDSREEQSNNNNNDDNAGGGGCEEDEIDPLDAFMEGIHEEMKSAPPPKPKEKVEDRYKDDLEDDPMESFLRAKKDLGLTLASDALHAGYDSDEEVYAAAKAVDAGLIDYDSDDNPIVLDKKKIEPIAPLDHTEIDYQPFNKDFYEESPSISGMSEQDVTDYRKSLAIRVSGFEVPKPVKTFEDCGFAPQIMGAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKEEGPIGVICAPTRELAHQIYLEAKKFAKAYGIRVSAVYGGMSKLEQFKELKAGCEIVVATPGRLIDMLKMKALAMLRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTLLFSATMPRKVEKLAREILSDPIRVTVGEVGMANEDITQVVQVIPSDSEKLPWLLEKLPEMIDQGDTLVFASKKATVDEIEAQLGQRGFKVAALHGDKDQSSRMDILQKFKSGTYHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKDGVAYTLITQKEARFAGELVNSLVAAGQNVSTELMDLAMKDGRFRSKRDARKGGGRKGKGRGGGAGGKGVRGVDFGLGIGYSTESNNASSNAVPGRSAAVNSLRTGMMSQFRSSFVAASSTSQNEGFSNNTSMAVNKRPTLAGFVSGGSIGGDINTHQQTASYNPAPSTVNSTSQNSGVNPGQNNTNRSLF*