AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780038048.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780038048.01.T01 MTR_7g444860 96.215 317 9 3 1 317 1 314 0.0 625
MsG0780038048.01.T01 MTR_3g085180 53.957 139 60 2 98 236 115 249 2.59e-41 149
MsG0780038048.01.T01 MTR_4g088555 72.840 81 22 0 152 232 63 143 1.54e-36 128
MsG0780038048.01.T01 MTR_1g053715 53.846 130 57 1 104 230 23 152 2.77e-36 134
MsG0780038048.01.T01 MTR_7g092930 51.145 131 61 1 104 231 17 147 5.85e-36 132
MsG0780038048.01.T01 MTR_2g014200 67.778 90 28 1 138 227 51 139 4.63e-35 124
MsG0780038048.01.T01 MTR_8g463140 68.235 85 27 0 152 236 65 149 9.57e-35 125
MsG0780038048.01.T01 MTR_2g078770 58.182 110 45 1 129 238 36 144 9.57e-35 124
MsG0780038048.01.T01 MTR_5g046670 51.111 135 60 2 98 229 190 321 2.54e-34 131
MsG0780038048.01.T01 MTR_8g005960 67.857 84 27 0 145 228 180 263 3.64e-34 127
MsG0780038048.01.T01 MTR_3g099080 55.000 100 45 0 134 233 80 179 4.17e-34 128
MsG0780038048.01.T01 MTR_4g109770 53.175 126 55 2 101 225 74 196 5.34e-34 130
MsG0780038048.01.T01 MTR_2g461920 60.377 106 36 2 146 251 165 264 1.12e-33 130
MsG0780038048.01.T01 MTR_7g110320 58.182 110 45 1 128 236 120 229 1.43e-33 130
MsG0780038048.01.T01 MTR_7g110320 58.182 110 45 1 128 236 120 229 2.51e-33 130
MsG0780038048.01.T01 MTR_8g096780 55.556 99 44 0 138 236 85 183 1.11e-32 125
MsG0780038048.01.T01 MTR_2g046550 51.938 129 51 3 122 246 116 237 1.19e-31 125
MsG0780038048.01.T01 MTR_7g028740 65.000 80 28 0 152 231 77 156 7.32e-31 119
MsG0780038048.01.T01 MTR_1g086250 58.947 95 39 0 137 231 132 226 1.15e-30 122
MsG0780038048.01.T01 MTR_8g080680 38.983 177 75 5 87 243 58 221 2.51e-29 116
MsG0780038048.01.T01 MTR_1g035010 66.667 81 27 0 152 232 104 184 2.72e-29 118
MsG0780038048.01.T01 MTR_8g080690 46.094 128 67 1 98 225 99 224 2.76e-29 115
MsG0780038048.01.T01 MTR_8g080670 46.269 134 49 2 99 224 116 234 6.05e-29 115
MsG0780038048.01.T01 MTR_2g020620 56.061 66 29 0 165 230 103 168 8.71e-17 81.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780038048.01.T01 AT1G27370 54.839 124 55 1 103 225 126 249 6.24e-38 138
MsG0780038048.01.T01 AT1G27370 54.839 124 55 1 103 225 126 249 2.00e-37 137
MsG0780038048.01.T01 AT1G27370 54.839 124 55 1 103 225 126 249 2.00e-37 137
MsG0780038048.01.T01 AT1G27370 54.839 124 55 1 103 225 126 249 2.00e-37 137
MsG0780038048.01.T01 AT1G27370 54.839 124 55 1 103 225 126 249 2.00e-37 137
MsG0780038048.01.T01 AT1G27370 54.839 124 55 1 103 225 126 249 2.00e-37 137
MsG0780038048.01.T01 AT1G27370 54.839 124 55 1 103 225 126 249 2.00e-37 137
MsG0780038048.01.T01 AT1G27360 55.285 123 55 0 103 225 126 248 4.48e-37 137
MsG0780038048.01.T01 AT1G27360 55.285 123 55 0 103 225 126 248 4.48e-37 137
MsG0780038048.01.T01 AT1G27360 55.285 123 55 0 103 225 126 248 4.48e-37 137
MsG0780038048.01.T01 AT1G27360 55.285 123 55 0 103 225 126 248 4.48e-37 137
MsG0780038048.01.T01 AT2G33810 69.231 78 24 0 152 229 54 131 2.29e-35 125
MsG0780038048.01.T01 AT5G43270 53.846 130 56 3 98 225 115 242 3.17e-35 132
MsG0780038048.01.T01 AT5G43270 53.846 130 56 3 98 225 115 242 3.17e-35 132
MsG0780038048.01.T01 AT5G43270 53.846 130 56 3 98 225 115 242 3.17e-35 132
MsG0780038048.01.T01 AT3G15270 61.458 96 37 0 152 247 63 158 4.85e-35 125
MsG0780038048.01.T01 AT2G42200 63.736 91 33 0 149 239 71 161 2.52e-33 126
MsG0780038048.01.T01 AT1G53160 70.000 80 24 0 152 231 54 133 2.66e-33 121
MsG0780038048.01.T01 AT1G02065 70.513 78 23 0 148 225 184 261 3.16e-33 125
MsG0780038048.01.T01 AT1G53160 70.000 80 24 0 152 231 54 133 3.39e-33 120
MsG0780038048.01.T01 AT1G53160 70.000 80 24 0 152 231 54 133 3.39e-33 120
MsG0780038048.01.T01 AT3G57920 53.279 122 41 2 104 225 27 132 7.16e-33 124
MsG0780038048.01.T01 AT3G60030 58.654 104 42 1 134 236 108 211 8.09e-33 129
MsG0780038048.01.T01 AT1G69170 53.982 113 39 1 113 225 98 197 1.36e-32 125
MsG0780038048.01.T01 AT5G50670 57.303 89 38 0 145 233 94 182 8.95e-31 119
MsG0780038048.01.T01 AT5G50670 57.303 89 38 0 145 233 94 182 8.95e-31 119
MsG0780038048.01.T01 AT5G50570 57.303 89 38 0 145 233 94 182 8.95e-31 119
MsG0780038048.01.T01 AT5G50570 57.303 89 38 0 145 233 94 182 8.95e-31 119
MsG0780038048.01.T01 AT1G76580 66.667 81 27 0 151 231 113 193 1.19e-30 122
MsG0780038048.01.T01 AT1G76580 66.667 81 27 0 151 231 113 193 1.24e-30 122
MsG0780038048.01.T01 AT1G76580 66.667 81 27 0 151 231 113 193 2.18e-30 121
MsG0780038048.01.T01 AT1G20980 70.130 77 23 0 152 228 120 196 3.42e-30 121
MsG0780038048.01.T01 AT2G47070 69.333 75 23 0 152 226 106 180 1.00e-29 119
MsG0780038048.01.T01 AT5G18830 44.211 95 53 0 143 237 129 223 2.16e-19 89.4
MsG0780038048.01.T01 AT5G18830 44.211 95 53 0 143 237 129 223 2.22e-19 89.4
MsG0780038048.01.T01 AT5G18830 44.211 95 53 0 143 237 129 223 2.35e-19 89.4
MsG0780038048.01.T01 AT1G02065 63.934 61 20 1 148 206 184 244 7.80e-19 84.7
MsG0780038048.01.T01 AT2G47070 72.549 51 14 0 176 226 1 51 9.15e-18 84.3

Find 130 sgRNAs with CRISPR-Local

Find 310 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGATGAAAGGTTTAGAAGTT+TGG 0.236966 7:+39061025 None:intergenic
TGGGAAGACGGCGGCGGTGG+TGG 0.238002 7:-39060487 MsG0780038048.01.T01:CDS
GATGTGAGTGGTGGTGGTGG+GGG 0.246735 7:-39060555 MsG0780038048.01.T01:CDS
AGCCAGTAAGTCCGAATAAT+TGG 0.259835 7:+39056448 None:intergenic
AAACTTTAGGCCGTGGTTCT+TGG 0.270664 7:+39056385 None:intergenic
ATCCAATTATTCGGACTTAC+TGG 0.273786 7:-39056450 MsG0780038048.01.T01:three_prime_UTR
AGAAAGAAGTGAAGAGAAAC+TGG 0.279506 7:+39060985 None:intergenic
ATGTGAGTGGTGGTGGTGGG+GGG 0.286741 7:-39060554 MsG0780038048.01.T01:CDS
GGATGTGAGTGGTGGTGGTG+GGG 0.287064 7:-39060556 MsG0780038048.01.T01:CDS
AGTTTATTTCTCTAAACTTT+AGG 0.290017 7:+39056372 None:intergenic
AAACCCAACACCACAACTTT+TGG 0.295801 7:+39060354 None:intergenic
CATATGTTGTGGGAAATAAT+TGG 0.328845 7:+39056655 None:intergenic
TGTCATCTCGGACTGATTCA+TGG 0.336380 7:-39056835 MsG0780038048.01.T01:CDS
ACATTAGTGATGGTTTCTTA+TGG 0.352970 7:-39056621 MsG0780038048.01.T01:exon
AGGATGTGAGTGGTGGTGGT+GGG 0.362480 7:-39060557 MsG0780038048.01.T01:CDS
TGGTGGGAAGACGGCGGCGG+TGG 0.367065 7:-39060490 MsG0780038048.01.T01:CDS
GAGGATGTGAGTGGTGGTGG+TGG 0.374532 7:-39060558 MsG0780038048.01.T01:CDS
CACCTCACATGTTTGAAGTT+GGG 0.387603 7:-39060597 MsG0780038048.01.T01:CDS
GGCGGTGGTGGGTGGTTATA+CGG 0.389810 7:-39060475 MsG0780038048.01.T01:CDS
CTGATCATCATCCAATTATT+CGG 0.390385 7:-39056459 MsG0780038048.01.T01:three_prime_UTR
GGAGGATATTGTGGTGGTGG+TGG 0.392988 7:-39060507 MsG0780038048.01.T01:CDS
AAGACGGCGGCGGTGGTGGG+TGG 0.396016 7:-39060483 MsG0780038048.01.T01:CDS
AAAAGTTGTGGTGTTGGGTT+TGG 0.400118 7:-39060352 MsG0780038048.01.T01:CDS
TTTGAGGATGTGAGTGGTGG+TGG 0.427873 7:-39060561 MsG0780038048.01.T01:CDS
GGGAAGACGGCGGCGGTGGT+GGG 0.428096 7:-39060486 MsG0780038048.01.T01:CDS
GCACCAAAAGTTGTGGTGTT+GGG 0.429036 7:-39060357 MsG0780038048.01.T01:CDS
TCGACTGACTGCGATGACTA+TGG 0.431204 7:+39056566 None:intergenic
AGAAAACCGAGCATCGATAA+TGG 0.432077 7:-39056756 MsG0780038048.01.T01:CDS
CGTCGCCTTCGTTCTGAGGC+AGG 0.441947 7:+39060682 None:intergenic
AAACATGTGAGGTGTGGATC+AGG 0.445259 7:+39060606 None:intergenic
CTTTCTCTCTTCTGTCATCT+CGG 0.450629 7:-39056847 MsG0780038048.01.T01:CDS
GTTTCTTATGGCACGGAGCT+TGG 0.450748 7:-39056609 MsG0780038048.01.T01:three_prime_UTR
ATACGGTGGAGGTGTGTCTC+GGG 0.452355 7:-39060640 MsG0780038048.01.T01:CDS
ACACCTCACATGTTTGAAGT+TGG 0.453165 7:-39060598 MsG0780038048.01.T01:CDS
CATGTTTGAAGTTGGGGAAG+AGG 0.460346 7:-39060590 MsG0780038048.01.T01:CDS
CGTTATTGTTAGTATTACTT+TGG 0.461547 7:+39060853 None:intergenic
CATACGGTGGAGGTGTGTCT+CGG 0.463683 7:-39060641 MsG0780038048.01.T01:CDS
ATATAAACAAACATGGACTT+TGG 0.464767 7:-39060906 MsG0780038048.01.T01:exon
TAGCTAGACCTGCCTCGTTA+CGG 0.470096 7:+39060718 None:intergenic
AGTTGTAGAAGGAGACTGGC+AGG 0.470576 7:-39057891 MsG0780038048.01.T01:CDS
GGGCTGGCTGGGGAGAAGAA+AGG 0.471082 7:-39060534 MsG0780038048.01.T01:CDS
GCCTAGCCATTATCGATGCT+CGG 0.471586 7:+39056750 None:intergenic
GAAACTGGTTGGTTATATTG+AGG 0.475065 7:+39061000 None:intergenic
GATTCTGTCAACAGTGTAGC+AGG 0.478919 7:-39060323 MsG0780038048.01.T01:intron
GGCACCAAAAGTTGTGGTGT+TGG 0.478965 7:-39060358 MsG0780038048.01.T01:CDS
GGCTGGCTGGGGAGAAGAAA+GGG 0.481722 7:-39060533 MsG0780038048.01.T01:CDS
GCTAGCATCCTGGTTCTAGA+AGG 0.484857 7:+39056271 None:intergenic
AATTCCTCCCAACAGAATCA+TGG 0.485519 7:+39057841 None:intergenic
GAACCAGGATGCTAGCTAGC+TGG 0.489896 7:-39056264 MsG0780038048.01.T01:three_prime_UTR
TAATGCAGCACTGCATCTTA+CGG 0.490156 7:+39056793 None:intergenic
ACCTGCCTCGTTACGGTTGG+CGG 0.491349 7:+39060725 None:intergenic
TATGGCACGGAGCTTGGATA+CGG 0.492925 7:-39056603 MsG0780038048.01.T01:three_prime_UTR
ACCTCACATGTTTGAAGTTG+GGG 0.495007 7:-39060596 MsG0780038048.01.T01:CDS
AAGAAACAACTCAATATATG+AGG 0.496341 7:+39056516 None:intergenic
TTTCTCTAAACTTTAGGCCG+TGG 0.498084 7:+39056378 None:intergenic
TGGTGGTGGGAAGACGGCGG+CGG 0.500366 7:-39060493 MsG0780038048.01.T01:CDS
AATACGTCTTAGACAGAGAT+TGG 0.501602 7:-39056727 MsG0780038048.01.T01:CDS
GCCGCCAACCGTAACGAGGC+AGG 0.504436 7:-39060726 MsG0780038048.01.T01:CDS
TGAATGCTAAGGAGTATCAT+AGG 0.506629 7:-39060410 MsG0780038048.01.T01:CDS
AAGAAGTTGTAGAAGGAGAC+TGG 0.506657 7:-39057895 MsG0780038048.01.T01:CDS
AGTCAGTCGATCAAAATTGT+TGG 0.507021 7:-39056553 MsG0780038048.01.T01:three_prime_UTR
CCATGCCGTGGAAGATTACA+AGG 0.507477 7:-39056693 MsG0780038048.01.T01:CDS
GGAGTATCATAGGAGACATA+AGG 0.511196 7:-39060400 MsG0780038048.01.T01:CDS
GACTGATTCATGGCTTTCAC+CGG 0.514906 7:-39056825 MsG0780038048.01.T01:CDS
CTAGCTAGCTGGACTAGTTA+CGG 0.516257 7:-39056253 MsG0780038048.01.T01:three_prime_UTR
TTGTGGTGGTGGTGGGAAGA+CGG 0.516504 7:-39060499 MsG0780038048.01.T01:CDS
GTGACAAGATGTCAGGTGGA+TGG 0.517621 7:-39060450 MsG0780038048.01.T01:CDS
CGTCCGTCGCCTTCGTTCTG+AGG 0.519896 7:+39060678 None:intergenic
GAGGATATTGTGGTGGTGGT+GGG 0.521993 7:-39060506 MsG0780038048.01.T01:CDS
GGAAATAATTGGACTCGGAA+TGG 0.522818 7:+39056666 None:intergenic
AGAGCTCCCATGATTCTGTT+GGG 0.525869 7:-39057848 MsG0780038048.01.T01:CDS
CATCTTACGGAGAGGTCAGC+CGG 0.534335 7:+39056806 None:intergenic
AAGAGCTCCCATGATTCTGT+TGG 0.535482 7:-39057849 MsG0780038048.01.T01:CDS
TAAACAAACATGGACTTTGG+AGG 0.536667 7:-39060903 MsG0780038048.01.T01:exon
GTTTCACTACTTTCAAGATA+CGG 0.536823 7:+39060958 None:intergenic
CAAAGTAATACTAACAATAA+CGG 0.540380 7:-39060852 MsG0780038048.01.T01:CDS
GGGGAGAAGAAAGGGAAAGG+AGG 0.540943 7:-39060525 MsG0780038048.01.T01:CDS
TACGGCGGTGACAAGATGTC+AGG 0.542371 7:-39060457 MsG0780038048.01.T01:CDS
AAAGGAGGATATTGTGGTGG+TGG 0.543034 7:-39060510 MsG0780038048.01.T01:CDS
CATCAAATTCTGACACAACA+TGG 0.543897 7:+39057925 None:intergenic
TTATTCGGACTTACTGGCTG+TGG 0.546694 7:-39056444 MsG0780038048.01.T01:three_prime_UTR
TGCAACAATCTTACCTTGTG+AGG 0.547389 7:+39057818 None:intergenic
AAAGGGAAAGGAGGATATTG+TGG 0.551862 7:-39060516 MsG0780038048.01.T01:CDS
AGAAGTGAAGAGAAACTGGT+TGG 0.553867 7:+39060989 None:intergenic
TGCCTCGTTACGGTTGGCGG+CGG 0.558232 7:+39060728 None:intergenic
AACAATAACGGTAACAGTAA+CGG 0.559154 7:-39060840 MsG0780038048.01.T01:CDS
ATTCCTCCCAACAGAATCAT+GGG 0.563033 7:+39057842 None:intergenic
CGACAGTATCGGAGTGCATA+CGG 0.565269 7:-39060657 MsG0780038048.01.T01:CDS
GATCTCCTTGTAATCTTCCA+CGG 0.568098 7:+39056688 None:intergenic
TTTATATATATAAACAAACA+TGG 0.569431 7:-39060913 MsG0780038048.01.T01:exon
TATCGGAGTGCATACGGTGG+AGG 0.569830 7:-39060651 MsG0780038048.01.T01:CDS
TTGTGGGAAATAATTGGACT+CGG 0.572180 7:+39056661 None:intergenic
CCTTGTAATCTTCCACGGCA+TGG 0.577549 7:+39056693 None:intergenic
TGACAAGATGTCAGGTGGAT+GGG 0.580510 7:-39060449 MsG0780038048.01.T01:CDS
TTCCGCAGACACATTAGTGA+TGG 0.581420 7:-39056631 MsG0780038048.01.T01:exon
TTATATTGAGGAATGATGAA+AGG 0.582803 7:+39061012 None:intergenic
AGTGATGGTTTCTTATGGCA+CGG 0.585253 7:-39056616 MsG0780038048.01.T01:three_prime_UTR
AGTCCAGCTAGCTAGCATCC+TGG 0.586047 7:+39056261 None:intergenic
AAACAAACATGGACTTTGGA+GGG 0.586271 7:-39060902 MsG0780038048.01.T01:exon
GCATTTGCAGCACCATGCCG+TGG 0.588118 7:-39056705 MsG0780038048.01.T01:CDS
TACGGTGGAGGTGTGTCTCG+GGG 0.588358 7:-39060639 MsG0780038048.01.T01:CDS
GGTTTGTGAGATGCATTCAA+AGG 0.590461 7:-39060379 MsG0780038048.01.T01:CDS
CGTGGCATTGATGAATGCTA+AGG 0.590898 7:-39060421 MsG0780038048.01.T01:CDS
AACTTCAAACATGTGAGGTG+TGG 0.592893 7:+39060600 None:intergenic
TTCAAAGGCACCAAAAGTTG+TGG 0.596745 7:-39060364 MsG0780038048.01.T01:CDS
CTCCGCCGCCAACCGTAACG+AGG 0.600437 7:-39060730 MsG0780038048.01.T01:CDS
AAGGCGACGGACGACAGTAT+CGG 0.601886 7:-39060668 MsG0780038048.01.T01:CDS
AGTAGTGGTAGTACTACTAC+TGG 0.602278 7:-39060804 MsG0780038048.01.T01:CDS
TCTGCGGAAACATATGTTGT+GGG 0.616543 7:+39056645 None:intergenic
ACCGAGCATCGATAATGGCT+AGG 0.618479 7:-39056751 MsG0780038048.01.T01:CDS
GTACTACTACTGGTACTGCA+TGG 0.620845 7:-39060794 MsG0780038048.01.T01:CDS
TAGACCTGCCTCGTTACGGT+TGG 0.627426 7:+39060722 None:intergenic
AACCATCACTAATGTGTCTG+CGG 0.630280 7:+39056629 None:intergenic
TGGTGGTGGTGGGAAGACGG+CGG 0.632124 7:-39060496 MsG0780038048.01.T01:CDS
GGCGGTGACAAGATGTCAGG+TGG 0.634393 7:-39060454 MsG0780038048.01.T01:CDS
CTGCCTCAGAACGAAGGCGA+CGG 0.639717 7:-39060681 MsG0780038048.01.T01:CDS
TCCCCAACTTCAAACATGTG+AGG 0.641757 7:+39060595 None:intergenic
GCTGGGGAGAAGAAAGGGAA+AGG 0.645912 7:-39060528 MsG0780038048.01.T01:CDS
GTTGTAGAAGGAGACTGGCA+GGG 0.647920 7:-39057890 MsG0780038048.01.T01:CDS
GGGAAAGGAGGATATTGTGG+TGG 0.654744 7:-39060513 MsG0780038048.01.T01:CDS
TCTTGGATAAAGATTTCATG+CGG 0.659264 7:+39056402 None:intergenic
GTTGGGAGGAATTCCTCACA+AGG 0.661568 7:-39057831 MsG0780038048.01.T01:intron
ATGTACCTGCCTCAGAACGA+AGG 0.668073 7:-39060687 MsG0780038048.01.T01:CDS
GTCTGCGGAAACATATGTTG+TGG 0.669116 7:+39056644 None:intergenic
GCTCCCATGATTCTGTTGGG+AGG 0.673767 7:-39057845 MsG0780038048.01.T01:CDS
CAGCACTGCATCTTACGGAG+AGG 0.706479 7:+39056798 None:intergenic
TCAGGTGGATGGGTGTAACG+TGG 0.711182 7:-39060439 MsG0780038048.01.T01:CDS
AAATCTTTATCCAAGAACCA+CGG 0.717947 7:-39056395 MsG0780038048.01.T01:three_prime_UTR
CAGTATCGGAGTGCATACGG+TGG 0.746660 7:-39060654 MsG0780038048.01.T01:CDS
GGTGGTGGGTGGTTATACGG+CGG 0.751778 7:-39060472 MsG0780038048.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAACCAAAAAAATTAAAAAA+AGG + Chr7:39060037-39060056 None:intergenic 10.0%
!! TTTATATATATAAACAAACA+TGG - Chr7:39056279-39056298 MsG0780038048.01.T01:three_prime_UTR 10.0%
!!! AAACCTTTTTTTAATTTTTT+TGG - Chr7:39060031-39060050 MsG0780038048.01.T01:intron 10.0%
!!! ACAAAATTTTGAATATTTAT+AGG - Chr7:39058576-39058595 MsG0780038048.01.T01:intron 10.0%
!!! CAAAATTTTGAATATTTATA+GGG - Chr7:39058577-39058596 MsG0780038048.01.T01:intron 10.0%
!!! GTTTTTAATTTTATGTTTTA+GGG - Chr7:39059176-39059195 MsG0780038048.01.T01:intron 10.0%
!!! TTAACCATTTTTTATAAAAT+CGG - Chr7:39058613-39058632 MsG0780038048.01.T01:intron 10.0%
!!! TTTTTATTTTTGAAATTTTC+TGG + Chr7:39058898-39058917 None:intergenic 10.0%
!! AAAAAAAATATTGAAAACGT+AGG + Chr7:39059789-39059808 None:intergenic 15.0%
!! AAAACTAAAATAAACATAAG+GGG + Chr7:39060176-39060157 None:intergenic 15.0%
!! AAAATGGTTAATTAAGTAAA+TGG + Chr7:39058604-39058623 None:intergenic 15.0%
!! ATAATAATCACAATAACAAA+TGG - Chr7:39058972-39058991 MsG0780038048.01.T01:intron 15.0%
!! ATAATATTTACTGCTAAATT+TGG + Chr7:39057149-39057168 None:intergenic 15.0%
!! GAAAACTAAAATAAACATAA+GGG + Chr7:39060175-39060156 None:intergenic 15.0%
!! GATAATTAATATGAAAAATG+TGG - Chr7:39059220-39059239 MsG0780038048.01.T01:intron 15.0%
!! TAAATATTCAGTTAAGTAAA+TGG - Chr7:39058331-39058350 MsG0780038048.01.T01:intron 15.0%
!! TGAAAACTAAAATAAACATA+AGG + Chr7:39060174-39060155 None:intergenic 15.0%
!! TTACTAAGAGATAAAAAAAT+AGG + Chr7:39060200-39060219 None:intergenic 15.0%
!! TTACTTAACTGAATATTTAT+GGG + Chr7:39058330-39058349 None:intergenic 15.0%
!! TTCAAAAAAAGTAAATATCA+TGG + Chr7:39059442-39059461 None:intergenic 15.0%
!! TTTACTTAACTGAATATTTA+TGG + Chr7:39058331-39058350 None:intergenic 15.0%
!! TTTATTGATAAAATAGTATG+AGG + Chr7:39057893-39057912 None:intergenic 15.0%
!!! AGTTCTTAACTTTTATTTTT+AGG + Chr7:39060893-39060912 None:intergenic 15.0%
!!! CGTTTTCAATATTTTTTTTA+AGG - Chr7:39059790-39059809 MsG0780038048.01.T01:intron 15.0%
!!! GGTTTTTAATTTTATGTTTT+AGG - Chr7:39059175-39059194 MsG0780038048.01.T01:intron 15.0%
!!! GTATATTTGAGTATATTTTT+TGG - Chr7:39057049-39057068 MsG0780038048.01.T01:intron 15.0%
!!! GTTCTTAACTTTTATTTTTA+GGG + Chr7:39060892-39060911 None:intergenic 15.0%
!!! TAAAAATGAATTGATTTTAG+AGG - Chr7:39059072-39059091 MsG0780038048.01.T01:intron 15.0%
!!! TAACCATTTTTTATAAAATC+GGG - Chr7:39058614-39058633 MsG0780038048.01.T01:intron 15.0%
!!! TATTTTTAGGGATATTAAAA+TGG + Chr7:39060880-39060899 None:intergenic 15.0%
!!! TTATATATTTTCAATGCATT+AGG + Chr7:39059553-39059572 None:intergenic 15.0%
!!! TTGAAACTTTTAAAACATAA+GGG + Chr7:39059865-39059884 None:intergenic 15.0%
!! AATTAATATGAAAAATGTGG+TGG - Chr7:39059223-39059242 MsG0780038048.01.T01:intron 20.0%
!! ATAGCAAGCAAATATTATTA+TGG + Chr7:39057563-39057582 None:intergenic 20.0%
!! ATTAATATAGATGTGGATAT+TGG + Chr7:39058746-39058765 None:intergenic 20.0%
!! ATTTACATAACATCATTGAA+TGG - Chr7:39059639-39059658 MsG0780038048.01.T01:intron 20.0%
!! CAAAGTAATACTAACAATAA+CGG - Chr7:39056340-39056359 MsG0780038048.01.T01:three_prime_UTR 20.0%
!! GAATTATATTTATCTAATGC+AGG - Chr7:39058707-39058726 MsG0780038048.01.T01:intron 20.0%
!! TACTTAACTGAATATTTATG+GGG + Chr7:39058329-39058348 None:intergenic 20.0%
!! TTTGACAAAAAAAACATGAT+TGG - Chr7:39057582-39057601 MsG0780038048.01.T01:intron 20.0%
!!! AAAGTGTGATTTTATTTTGT+AGG - Chr7:39058545-39058564 MsG0780038048.01.T01:intron 20.0%
!!! AAAGTGTGATTTTATTTTGT+AGG + Chr7:39058564-39058545 None:intergenic 20.0%
!!! AAGTGTGATTTTATTTTGTA+GGG - Chr7:39058546-39058565 MsG0780038048.01.T01:intron 20.0%
!!! AAGTGTGATTTTATTTTGTA+GGG + Chr7:39058565-39058546 None:intergenic 20.0%
!!! AGTTTATTTCTCTAAACTTT+AGG + Chr7:39060823-39060842 None:intergenic 20.0%
!!! ATAAGAGTACACAATTTTTT+TGG - Chr7:39059569-39059588 MsG0780038048.01.T01:intron 20.0%
!!! ATGTTTTAAAAGTTTCAAGT+TGG - Chr7:39059867-39059886 MsG0780038048.01.T01:intron 20.0%
!!! CGTTTTATTTATGTAATCTT+CGG - Chr7:39057632-39057651 MsG0780038048.01.T01:intron 20.0%
!!! CTATTTTCTACTAGTAAATA+TGG + Chr7:39057093-39057112 None:intergenic 20.0%
!!! CTTGAAACTTTTAAAACATA+AGG + Chr7:39059866-39059885 None:intergenic 20.0%
!!! GAATACTTTTAATGTTAATG+AGG - Chr7:39056426-39056445 MsG0780038048.01.T01:three_prime_UTR 20.0%
!!! GTTTATTTTAGTTTTCATGT+TGG - Chr7:39059838-39059857 MsG0780038048.01.T01:intron 20.0%
!!! TAACCCGATTTTATAAAAAA+TGG + Chr7:39058620-39058639 None:intergenic 20.0%
!!! TATAATTGTTGTTATGTTCA+CGG - Chr7:39056989-39057008 MsG0780038048.01.T01:intron 20.0%
!!! TGCTGATGAAATTTTTTATA+GGG + Chr7:39058418-39058437 None:intergenic 20.0%
!!! TTGAAACTTTTAAAACGTAA+TGG + Chr7:39060144-39060125 None:intergenic 20.0%
!!! TTGCTGATGAAATTTTTTAT+AGG + Chr7:39058419-39058438 None:intergenic 20.0%
!!! TTTAGGGTTAATTAAGTAAA+TGG - Chr7:39058302-39058321 MsG0780038048.01.T01:intron 20.0%
! AACGTACATTTATTTACGTT+TGG - Chr7:39057665-39057684 MsG0780038048.01.T01:intron 25.0%
! AAGAAACAACTCAATATATG+AGG + Chr7:39060679-39060698 None:intergenic 25.0%
! AATCTTTAAACGTTAAGTGA+TGG + Chr7:39059960-39059979 None:intergenic 25.0%
! ACATAATATATGCAAGGTTT+AGG - Chr7:39057995-39058014 MsG0780038048.01.T01:intron 25.0%
! ATATAAACAAACATGGACTT+TGG - Chr7:39056286-39056305 MsG0780038048.01.T01:three_prime_UTR 25.0%
! ATCCACATCTATATTAATAG+TGG - Chr7:39058748-39058767 MsG0780038048.01.T01:intron 25.0%
! ATCCACTATTAATATAGATG+TGG + Chr7:39058753-39058772 None:intergenic 25.0%
! ATGCTAAAGGAAAATGTTAT+AGG - Chr7:39058516-39058535 MsG0780038048.01.T01:intron 25.0%
! ATTCAAAAAGAAGTTGTAGA+AGG - Chr7:39059290-39059309 MsG0780038048.01.T01:intron 25.0%
! CACAATACATAATATATGCA+AGG - Chr7:39057989-39058008 MsG0780038048.01.T01:intron 25.0%
! CACTTAACGTTTAAAGATTT+GGG - Chr7:39059961-39059980 MsG0780038048.01.T01:intron 25.0%
! CATAATATATGCAAGGTTTA+GGG - Chr7:39057996-39058015 MsG0780038048.01.T01:intron 25.0%
! CGTTATTGTTAGTATTACTT+TGG + Chr7:39056342-39056361 None:intergenic 25.0%
! TACAATTGCATTCAATATCA+TGG + Chr7:39059475-39059494 None:intergenic 25.0%
! TCACTTAACGTTTAAAGATT+TGG - Chr7:39059960-39059979 MsG0780038048.01.T01:intron 25.0%
! TGCTAAAGGAAAATGTTATA+GGG - Chr7:39058517-39058536 MsG0780038048.01.T01:intron 25.0%
! TTATATTGAGGAATGATGAA+AGG + Chr7:39056183-39056202 None:intergenic 25.0%
! TTGTTTATCTAATGTGTAGT+TGG + Chr7:39058116-39058135 None:intergenic 25.0%
!! AAAATGCACTTCTCATTTTA+AGG + Chr7:39058663-39058682 None:intergenic 25.0%
!! ACATTTTCCTTTAGCATTTT+AGG + Chr7:39058513-39058532 None:intergenic 25.0%
!! AGATTGAAGATGAATCTTTT+GGG + Chr7:39058204-39058223 None:intergenic 25.0%
!! ATAATTGTTGTTATGTTCAC+GGG - Chr7:39056990-39057009 MsG0780038048.01.T01:intron 25.0%
!! ATAGTCCTTTAAAAAACGAT+TGG - Chr7:39057109-39057128 MsG0780038048.01.T01:intron 25.0%
!! CAAAGGTGTAAAAATTATGT+GGG - Chr7:39059102-39059121 MsG0780038048.01.T01:intron 25.0%
!! CATTTTCCTTTAGCATTTTA+GGG + Chr7:39058512-39058531 None:intergenic 25.0%
!! GAAGATACTTTAAAGATAGA+TGG - Chr7:39059701-39059720 MsG0780038048.01.T01:intron 25.0%
!! GATGTTTGTTGGAATAATAA+TGG - Chr7:39057740-39057759 MsG0780038048.01.T01:intron 25.0%
!! TAGTTGTATAGGTTTCTTTT+TGG + Chr7:39058856-39058875 None:intergenic 25.0%
!! TATTTGAGTTTCTTAGAGAT+CGG + Chr7:39058090-39058109 None:intergenic 25.0%
!! TCAAAGGTGTAAAAATTATG+TGG - Chr7:39059101-39059120 MsG0780038048.01.T01:intron 25.0%
!! TCATAAAACAGTGTACTTTT+AGG + Chr7:39060848-39060867 None:intergenic 25.0%
!!! AAGTACCAATCGTTTTTTAA+AGG + Chr7:39057117-39057136 None:intergenic 25.0%
!!! ACACAGACACAATTTTTTTT+AGG - Chr7:39058285-39058304 MsG0780038048.01.T01:intron 25.0%
!!! ACGTTTTAAAAGTTTCAAGT+TGG - Chr7:39059896-39059915 MsG0780038048.01.T01:intron 25.0%
!!! ACGTTTTAAAAGTTTCAAGT+TGG + Chr7:39059915-39059896 None:intergenic 25.0%
!!! ATGTTGATGGAAAATTTTAC+AGG + Chr7:39058450-39058469 None:intergenic 25.0%
!!! ATTGCCAATATCTTTTTTAG+TGG + Chr7:39058040-39058059 None:intergenic 25.0%
!!! CACAGACACAATTTTTTTTA+GGG - Chr7:39058286-39058305 MsG0780038048.01.T01:intron 25.0%
!!! GTAATACTTTCTAGTTGTAT+AGG + Chr7:39058867-39058886 None:intergenic 25.0%
!!! TCTATCTTTAAAGTATCTTC+TGG + Chr7:39059701-39059720 None:intergenic 25.0%
!!! TGTTGATGGAAAATTTTACA+GGG + Chr7:39058449-39058468 None:intergenic 25.0%
AAATCTTTATCCAAGAACCA+CGG - Chr7:39060797-39060816 MsG0780038048.01.T01:CDS 30.0%
AACAATAACGGTAACAGTAA+CGG - Chr7:39056352-39056371 MsG0780038048.01.T01:three_prime_UTR 30.0%
AAGGACTATAGTTACTCTAT+CGG + Chr7:39059608-39059627 None:intergenic 30.0%
AATATGAAAAATGTGGTGGT+GGG - Chr7:39059227-39059246 MsG0780038048.01.T01:intron 30.0%
ACATTAGTGATGGTTTCTTA+TGG - Chr7:39060571-39060590 MsG0780038048.01.T01:CDS 30.0%
ACCACCACTAAAAAAGATAT+TGG - Chr7:39058033-39058052 MsG0780038048.01.T01:intron 30.0%
CAAACATCAGATACATTTGT+TGG + Chr7:39057728-39057747 None:intergenic 30.0%
CAAATGTATCTGATGTTTGT+TGG - Chr7:39057729-39057748 MsG0780038048.01.T01:intron 30.0%
CAAGCATAGATCAAATGAAT+TGG + Chr7:39057308-39057327 None:intergenic 30.0%
CATAGTAGACAATATGTTGA+TGG - Chr7:39060285-39060304 MsG0780038048.01.T01:intron 30.0%
CATATGTTGTGGGAAATAAT+TGG + Chr7:39060540-39060559 None:intergenic 30.0%
CTGATCATCATCCAATTATT+CGG - Chr7:39060733-39060752 MsG0780038048.01.T01:CDS 30.0%
GTTTCACTACTTTCAAGATA+CGG + Chr7:39056237-39056256 None:intergenic 30.0%
TAATATGAAAAATGTGGTGG+TGG - Chr7:39059226-39059245 MsG0780038048.01.T01:intron 30.0%
TATTTGCACACAATGTTGTA+TGG - Chr7:39059154-39059173 MsG0780038048.01.T01:intron 30.0%
TCGAATAACAAATCCACTAT+TGG - Chr7:39058248-39058267 MsG0780038048.01.T01:intron 30.0%
TCTTGGATAAAGATTTCATG+CGG + Chr7:39060793-39060812 None:intergenic 30.0%
TGATGAAAGGTTTAGAAGTT+TGG + Chr7:39056170-39056189 None:intergenic 30.0%
TGGAGATTCAAAGATAACTA+CGG - Chr7:39057778-39057797 MsG0780038048.01.T01:intron 30.0%
TTGATCTATGCTTGATTGTT+GGG - Chr7:39057314-39057333 MsG0780038048.01.T01:intron 30.0%
TTTGATCTATGCTTGATTGT+TGG - Chr7:39057313-39057332 MsG0780038048.01.T01:intron 30.0%
! AAATTTTACGCCAGCATTTT+CGG - Chr7:39058485-39058504 MsG0780038048.01.T01:intron 30.0%
! AATAAATGTACGTTTTCTGC+AGG + Chr7:39057659-39057678 None:intergenic 30.0%
! ACTTGACTTTTATCCAATAG+TGG + Chr7:39058264-39058283 None:intergenic 30.0%
! ATGTAAATTTGAGACAGTCA+AGG + Chr7:39059627-39059646 None:intergenic 30.0%
! ATTATCTTTGAGTAGCTTTG+AGG - Chr7:39058920-39058939 MsG0780038048.01.T01:intron 30.0%
! GAGATTGAAGATGAATCTTT+TGG + Chr7:39058205-39058224 None:intergenic 30.0%
! TTACAACGACGATCATTTTA+AGG + Chr7:39057272-39057291 None:intergenic 30.0%
! TTATTCGAGCTTGTTCTTTA+TGG + Chr7:39058236-39058255 None:intergenic 30.0%
! TTGGGATTTTGAATTCTCTT+GGG + Chr7:39058186-39058205 None:intergenic 30.0%
! TTTGTTTCTTGTAATCAGGT+GGG - Chr7:39060318-39060337 MsG0780038048.01.T01:intron 30.0%
!! ACATTTGTTGGCTTTAAAGA+GGG + Chr7:39057716-39057735 None:intergenic 30.0%
!! AGAAATTTTCAAGACACAGT+TGG + Chr7:39057509-39057528 None:intergenic 30.0%
!! CACAGTTGGCAAATTTTAAT+TGG + Chr7:39057495-39057514 None:intergenic 30.0%
!! CATTTATTTACGTTTGGTGT+TGG - Chr7:39057671-39057690 MsG0780038048.01.T01:intron 30.0%
!! TACATTTGTTGGCTTTAAAG+AGG + Chr7:39057717-39057736 None:intergenic 30.0%
!! TTTGGGATTTTGAATTCTCT+TGG + Chr7:39058187-39058206 None:intergenic 30.0%
!! TTTTGTTTCTTGTAATCAGG+TGG - Chr7:39060317-39060336 MsG0780038048.01.T01:intron 30.0%
!!! GTATCTTCTGGTTGTTATTT+TGG + Chr7:39059689-39059708 None:intergenic 30.0%
!!! GTGTTTTGTTTCTTGTAATC+AGG - Chr7:39060314-39060333 MsG0780038048.01.T01:intron 30.0%
!!! TGTTTTAGGGATTTGTTCAT+TGG - Chr7:39059189-39059208 MsG0780038048.01.T01:intron 30.0%
!!! TTTTTTTTCCTTCTAGAACC+AGG - Chr7:39060913-39060932 MsG0780038048.01.T01:exon 30.0%
AAACAAACATGGACTTTGGA+GGG - Chr7:39056290-39056309 MsG0780038048.01.T01:three_prime_UTR 35.0%
AATACGTCTTAGACAGAGAT+TGG - Chr7:39060465-39060484 MsG0780038048.01.T01:CDS 35.0%
AATGGTTTAGACCACAAAAG+TGG - Chr7:39057758-39057777 MsG0780038048.01.T01:intron 35.0%
ACAGGGACTAAAAATGTTGA+TGG + Chr7:39058463-39058482 None:intergenic 35.0%
AGAAAGAAGTGAAGAGAAAC+TGG + Chr7:39056210-39056229 None:intergenic 35.0%
AGTCAGTCGATCAAAATTGT+TGG - Chr7:39060639-39060658 MsG0780038048.01.T01:CDS 35.0%
ATCCAATTATTCGGACTTAC+TGG - Chr7:39060742-39060761 MsG0780038048.01.T01:CDS 35.0%
ATCTTCCGTTCGTAATTTGA+TGG - Chr7:39059662-39059681 MsG0780038048.01.T01:intron 35.0%
ATGACTAACTTATTCCAACG+TGG + Chr7:39059935-39059954 None:intergenic 35.0%
CATCAAATTCTGACACAACA+TGG + Chr7:39059270-39059289 None:intergenic 35.0%
TAAACAAACATGGACTTTGG+AGG - Chr7:39056289-39056308 MsG0780038048.01.T01:three_prime_UTR 35.0%
TGACTAACTTATTCCAACGT+GGG + Chr7:39059934-39059953 None:intergenic 35.0%
TGATCTATGCTTGATTGTTG+GGG - Chr7:39057315-39057334 MsG0780038048.01.T01:intron 35.0%
TTGGTCCATCAAATTACGAA+CGG + Chr7:39059670-39059689 None:intergenic 35.0%
TTGTGGGAAATAATTGGACT+CGG + Chr7:39060534-39060553 None:intergenic 35.0%
! AATTTTTACACCTTTGACCC+TGG + Chr7:39059098-39059117 None:intergenic 35.0%
! ATATGAAAAATGTGGTGGTG+GGG - Chr7:39059228-39059247 MsG0780038048.01.T01:intron 35.0%
! GAAACTGGTTGGTTATATTG+AGG + Chr7:39056195-39056214 None:intergenic 35.0%
! GCTGGCGTAAAATTTTTACA+GGG + Chr7:39058480-39058499 None:intergenic 35.0%
! GTAACAGTAACGGTTTTACT+TGG - Chr7:39056362-39056381 MsG0780038048.01.T01:three_prime_UTR 35.0%
! TGCTGGCGTAAAATTTTTAC+AGG + Chr7:39058481-39058500 None:intergenic 35.0%
! TTCCAAAGTGAGTAACGTTT+TGG - Chr7:39060096-39060115 MsG0780038048.01.T01:intron 35.0%
!! ATGAATTGATTTTAGAGGCC+AGG - Chr7:39059077-39059096 MsG0780038048.01.T01:intron 35.0%
!! ATTTACGTTTGGTGTTGGAT+GGG - Chr7:39057676-39057695 MsG0780038048.01.T01:intron 35.0%
!! GTAGACAATATGTTGATGGT+TGG - Chr7:39060289-39060308 MsG0780038048.01.T01:intron 35.0%
!! TATTTACGTTTGGTGTTGGA+TGG - Chr7:39057675-39057694 MsG0780038048.01.T01:intron 35.0%
!! TCTTTGAATCTCCACTTTTG+TGG + Chr7:39057772-39057791 None:intergenic 35.0%
!! TGAATGCTAAGGAGTATCAT+AGG - Chr7:39056782-39056801 MsG0780038048.01.T01:CDS 35.0%
!! TGAATTGATTTTAGAGGCCA+GGG - Chr7:39059078-39059097 MsG0780038048.01.T01:intron 35.0%
!!! CATTATTTTGAGGATGTGAG+TGG - Chr7:39056625-39056644 MsG0780038048.01.T01:exon 35.0%
!!! GCCAATATCTTTTTTAGTGG+TGG + Chr7:39058037-39058056 None:intergenic 35.0%
AAAGGGAAAGGAGGATATTG+TGG - Chr7:39056676-39056695 MsG0780038048.01.T01:CDS 40.0%
AACCATCACTAATGTGTCTG+CGG + Chr7:39060566-39060585 None:intergenic 40.0%
AACTTCAAACATGTGAGGTG+TGG + Chr7:39056595-39056614 None:intergenic 40.0%
AAGAAGTTGTAGAAGGAGAC+TGG - Chr7:39059297-39059316 MsG0780038048.01.T01:intron 40.0%
AATTCCTCCCAACAGAATCA+TGG + Chr7:39059354-39059373 None:intergenic 40.0%
AGAAGTGAAGAGAAACTGGT+TGG + Chr7:39056206-39056225 None:intergenic 40.0%
AGCCAGTAAGTCCGAATAAT+TGG + Chr7:39060747-39060766 None:intergenic 40.0%
AGTAGTGGTAGTACTACTAC+TGG - Chr7:39056388-39056407 MsG0780038048.01.T01:three_prime_UTR 40.0%
AGTGATGGTTTCTTATGGCA+CGG - Chr7:39060576-39060595 MsG0780038048.01.T01:CDS 40.0%
ATTCCTCCCAACAGAATCAT+GGG + Chr7:39059353-39059372 None:intergenic 40.0%
CCAAGATTATTCGCACAATC+TGG - Chr7:39058773-39058792 MsG0780038048.01.T01:intron 40.0%
CCAGATTGTGCGAATAATCT+TGG + Chr7:39058776-39058795 None:intergenic 40.0%
CTATTTGCCACAATTCAAGG+AGG - Chr7:39057433-39057452 MsG0780038048.01.T01:intron 40.0%
CTTTCTCTCTTCTGTCATCT+CGG - Chr7:39060345-39060364 MsG0780038048.01.T01:CDS 40.0%
GATCTCCTTGTAATCTTCCA+CGG + Chr7:39060507-39060526 None:intergenic 40.0%
GCACTATTTGCCACAATTCA+AGG - Chr7:39057430-39057449 MsG0780038048.01.T01:intron 40.0%
GGAAATAATTGGACTCGGAA+TGG + Chr7:39060529-39060548 None:intergenic 40.0%
GGCAAATAGTGCATTGTGAT+TGG + Chr7:39057422-39057441 None:intergenic 40.0%
GGTTTGTGAGATGCATTCAA+AGG - Chr7:39056813-39056832 MsG0780038048.01.T01:CDS 40.0%
GTCCAAAACGTTACTCACTT+TGG + Chr7:39060101-39060120 None:intergenic 40.0%
GTTCAAAATGTTACCCACGT+TGG - Chr7:39059918-39059937 MsG0780038048.01.T01:intron 40.0%
TAATGCAGCACTGCATCTTA+CGG + Chr7:39060402-39060421 None:intergenic 40.0%
TCTGCGGAAACATATGTTGT+GGG + Chr7:39060550-39060569 None:intergenic 40.0%
TGCAACAATCTTACCTTGTG+AGG + Chr7:39059377-39059396 None:intergenic 40.0%
TGTGGCTGAAAAATAGGAAG+TGG - Chr7:39057456-39057475 MsG0780038048.01.T01:intron 40.0%
TTCGGTCCCTAAAATGCTAA+AGG - Chr7:39058503-39058522 MsG0780038048.01.T01:intron 40.0%
TTCTTAGAGATCGGTTAACG+AGG + Chr7:39058081-39058100 None:intergenic 40.0%
TTTCTCTAAACTTTAGGCCG+TGG + Chr7:39060817-39060836 None:intergenic 40.0%
! AAAAGTTGTGGTGTTGGGTT+TGG - Chr7:39056840-39056859 MsG0780038048.01.T01:CDS 40.0%
! AAACCCAACACCACAACTTT+TGG + Chr7:39056841-39056860 None:intergenic 40.0%
! AAGGTTTAGGGTTCGAATCT+CGG - Chr7:39058008-39058027 MsG0780038048.01.T01:intron 40.0%
! ACACCTCACATGTTTGAAGT+TGG - Chr7:39056594-39056613 MsG0780038048.01.T01:three_prime_UTR 40.0%
! ACCTCACATGTTTGAAGTTG+GGG - Chr7:39056596-39056615 MsG0780038048.01.T01:three_prime_UTR 40.0%
! AGTTAGTCTCTTTCACGACA+TGG + Chr7:39060074-39060093 None:intergenic 40.0%
! CACCTCACATGTTTGAAGTT+GGG - Chr7:39056595-39056614 MsG0780038048.01.T01:three_prime_UTR 40.0%
! GGAGTATCATAGGAGACATA+AGG - Chr7:39056792-39056811 MsG0780038048.01.T01:CDS 40.0%
! GGATTTTGAATTCTCTTGGG+AGG + Chr7:39058183-39058202 None:intergenic 40.0%
!! AGAAAACCGAGCATCGATAA+TGG - Chr7:39060436-39060455 MsG0780038048.01.T01:CDS 40.0%
!! ATTTTAGGGACCGAAAATGC+TGG + Chr7:39058498-39058517 None:intergenic 40.0%
!! GACAATATGTTGATGGTTGG+TGG - Chr7:39060292-39060311 MsG0780038048.01.T01:intron 40.0%
!! TATTTTGAGGATGTGAGTGG+TGG - Chr7:39056628-39056647 MsG0780038048.01.T01:exon 40.0%
!! TTCAAAGGCACCAAAAGTTG+TGG - Chr7:39056828-39056847 MsG0780038048.01.T01:CDS 40.0%
!! TTTACGTTTGGTGTTGGATG+GGG - Chr7:39057677-39057696 MsG0780038048.01.T01:intron 40.0%
!!! GGTTTTACTTGGTGTAGTAG+TGG - Chr7:39056373-39056392 MsG0780038048.01.T01:three_prime_UTR 40.0%
AAACATGTGAGGTGTGGATC+AGG + Chr7:39056589-39056608 None:intergenic 45.0%
AAACTTTAGGCCGTGGTTCT+TGG + Chr7:39060810-39060829 None:intergenic 45.0%
AAAGGAGGATATTGTGGTGG+TGG - Chr7:39056682-39056701 MsG0780038048.01.T01:CDS 45.0%
AAGAGCTCCCATGATTCTGT+TGG - Chr7:39059343-39059362 MsG0780038048.01.T01:intron 45.0%
AGAGCTCCCATGATTCTGTT+GGG - Chr7:39059344-39059363 MsG0780038048.01.T01:intron 45.0%
GATTCTGTCAACAGTGTAGC+AGG - Chr7:39056869-39056888 MsG0780038048.01.T01:intron 45.0%
GCACCAAAAGTTGTGGTGTT+GGG - Chr7:39056835-39056854 MsG0780038048.01.T01:CDS 45.0%
GCTTGTCAAGTGAGTTAACG+AGG + Chr7:39057970-39057989 None:intergenic 45.0%
GTACTACTACTGGTACTGCA+TGG - Chr7:39056398-39056417 MsG0780038048.01.T01:three_prime_UTR 45.0%
GTCTGCGGAAACATATGTTG+TGG + Chr7:39060551-39060570 None:intergenic 45.0%
TCCCCAACTTCAAACATGTG+AGG + Chr7:39056600-39056619 None:intergenic 45.0%
TGACAAGATGTCAGGTGGAT+GGG - Chr7:39056743-39056762 MsG0780038048.01.T01:CDS 45.0%
TTCCGCAGACACATTAGTGA+TGG - Chr7:39060561-39060580 MsG0780038048.01.T01:CDS 45.0%
! AGGAGGTGTGGCTGAAAAAT+AGG - Chr7:39057450-39057469 MsG0780038048.01.T01:intron 45.0%
! CATGTTTGAAGTTGGGGAAG+AGG - Chr7:39056602-39056621 MsG0780038048.01.T01:three_prime_UTR 45.0%
! GACTGATTCATGGCTTTCAC+CGG - Chr7:39060367-39060386 MsG0780038048.01.T01:CDS 45.0%
! TGTCATCTCGGACTGATTCA+TGG - Chr7:39060357-39060376 MsG0780038048.01.T01:CDS 45.0%
! TTATTCGGACTTACTGGCTG+TGG - Chr7:39060748-39060767 MsG0780038048.01.T01:CDS 45.0%
!! ATTTTAGAGGCCAGGGTCAA+AGG - Chr7:39059085-39059104 MsG0780038048.01.T01:intron 45.0%
!! CGTGGCATTGATGAATGCTA+AGG - Chr7:39056771-39056790 MsG0780038048.01.T01:CDS 45.0%
!! CTAGCTAGCTGGACTAGTTA+CGG - Chr7:39060939-39060958 MsG0780038048.01.T01:five_prime_UTR 45.0%
!!! GGGGAAGAGGCATTATTTTG+AGG - Chr7:39056615-39056634 MsG0780038048.01.T01:three_prime_UTR 45.0%
!!! AACAAAATTTTAAATATTTA+TGG + Chr7:39058360-39058379 None:intergenic 5.0%
!!! TAATTTTTTTTTAATAAATG+AGG - Chr7:39056937-39056956 MsG0780038048.01.T01:intron 5.0%
AGCCACACCTCCTTGAATTG+TGG + Chr7:39057443-39057462 None:intergenic 50.0%
AGTTGTAGAAGGAGACTGGC+AGG - Chr7:39059301-39059320 MsG0780038048.01.T01:intron 50.0%
ATGTACCTGCCTCAGAACGA+AGG - Chr7:39056505-39056524 MsG0780038048.01.T01:three_prime_UTR 50.0%
CCATGCCGTGGAAGATTACA+AGG - Chr7:39060499-39060518 MsG0780038048.01.T01:CDS 50.0%
CCTTGTAATCTTCCACGGCA+TGG + Chr7:39060502-39060521 None:intergenic 50.0%
GCCTAGCCATTATCGATGCT+CGG + Chr7:39060445-39060464 None:intergenic 50.0%
GGCACCAAAAGTTGTGGTGT+TGG - Chr7:39056834-39056853 MsG0780038048.01.T01:CDS 50.0%
GGGAAAGGAGGATATTGTGG+TGG - Chr7:39056679-39056698 MsG0780038048.01.T01:CDS 50.0%
GTGACAAGATGTCAGGTGGA+TGG - Chr7:39056742-39056761 MsG0780038048.01.T01:CDS 50.0%
GTTGGGAGGAATTCCTCACA+AGG - Chr7:39059361-39059380 MsG0780038048.01.T01:intron 50.0%
GTTGTAGAAGGAGACTGGCA+GGG - Chr7:39059302-39059321 MsG0780038048.01.T01:intron 50.0%
GTTTCTTATGGCACGGAGCT+TGG - Chr7:39060583-39060602 MsG0780038048.01.T01:CDS 50.0%
TAGCTAGACCTGCCTCGTTA+CGG + Chr7:39056477-39056496 None:intergenic 50.0%
TATGGCACGGAGCTTGGATA+CGG - Chr7:39060589-39060608 MsG0780038048.01.T01:CDS 50.0%
TCGACTGACTGCGATGACTA+TGG + Chr7:39060629-39060648 None:intergenic 50.0%
TGCCACAATTCAAGGAGGTG+TGG - Chr7:39057438-39057457 MsG0780038048.01.T01:intron 50.0%
TTTGAGGATGTGAGTGGTGG+TGG - Chr7:39056631-39056650 MsG0780038048.01.T01:exon 50.0%
! CGACAGTATCGGAGTGCATA+CGG - Chr7:39056535-39056554 MsG0780038048.01.T01:three_prime_UTR 50.0%
!! AAAAATGTGGTGGTGGGGAG+TGG - Chr7:39059233-39059252 MsG0780038048.01.T01:intron 50.0%
!! ACCGAGCATCGATAATGGCT+AGG - Chr7:39060441-39060460 MsG0780038048.01.T01:CDS 50.0%
!! GAGGATATTGTGGTGGTGGT+GGG - Chr7:39056686-39056705 MsG0780038048.01.T01:CDS 50.0%
!! GCTAGCATCCTGGTTCTAGA+AGG + Chr7:39060924-39060943 None:intergenic 50.0%
AAGGCGACGGACGACAGTAT+CGG - Chr7:39056524-39056543 MsG0780038048.01.T01:three_prime_UTR 55.0%
AGTCCAGCTAGCTAGCATCC+TGG + Chr7:39060934-39060953 None:intergenic 55.0%
CAGCACTGCATCTTACGGAG+AGG + Chr7:39060397-39060416 None:intergenic 55.0%
CATCTTACGGAGAGGTCAGC+CGG + Chr7:39060389-39060408 None:intergenic 55.0%
GAACCAGGATGCTAGCTAGC+TGG - Chr7:39060928-39060947 MsG0780038048.01.T01:five_prime_UTR 55.0%
GCTCCCATGATTCTGTTGGG+AGG - Chr7:39059347-39059366 MsG0780038048.01.T01:intron 55.0%
GCTGGGGAGAAGAAAGGGAA+AGG - Chr7:39056664-39056683 MsG0780038048.01.T01:CDS 55.0%
GGGGAGAAGAAAGGGAAAGG+AGG - Chr7:39056667-39056686 MsG0780038048.01.T01:CDS 55.0%
TACGGCGGTGACAAGATGTC+AGG - Chr7:39056735-39056754 MsG0780038048.01.T01:CDS 55.0%
TAGACCTGCCTCGTTACGGT+TGG + Chr7:39056473-39056492 None:intergenic 55.0%
TATCGGAGTGCATACGGTGG+AGG - Chr7:39056541-39056560 MsG0780038048.01.T01:three_prime_UTR 55.0%
TCAGGTGGATGGGTGTAACG+TGG - Chr7:39056753-39056772 MsG0780038048.01.T01:CDS 55.0%
! ATACGGTGGAGGTGTGTCTC+GGG - Chr7:39056552-39056571 MsG0780038048.01.T01:three_prime_UTR 55.0%
! CAGTATCGGAGTGCATACGG+TGG - Chr7:39056538-39056557 MsG0780038048.01.T01:three_prime_UTR 55.0%
! CATACGGTGGAGGTGTGTCT+CGG - Chr7:39056551-39056570 MsG0780038048.01.T01:three_prime_UTR 55.0%
! GTGGTGGGGAGTGGTTCTTT+AGG - Chr7:39059242-39059261 MsG0780038048.01.T01:intron 55.0%
!! AGGATGTGAGTGGTGGTGGT+GGG - Chr7:39056635-39056654 MsG0780038048.01.T01:exon 55.0%
!! GGAGGATATTGTGGTGGTGG+TGG - Chr7:39056685-39056704 MsG0780038048.01.T01:CDS 55.0%
!! TTGTGGTGGTGGTGGGAAGA+CGG - Chr7:39056693-39056712 MsG0780038048.01.T01:CDS 55.0%
ACCTGCCTCGTTACGGTTGG+CGG + Chr7:39056470-39056489 None:intergenic 60.0%
CGGTTAACGAGGCTGCTCAC+AGG + Chr7:39058070-39058089 None:intergenic 60.0%
CTGCCTCAGAACGAAGGCGA+CGG - Chr7:39056511-39056530 MsG0780038048.01.T01:three_prime_UTR 60.0%
GCATTTGCAGCACCATGCCG+TGG - Chr7:39060487-39060506 MsG0780038048.01.T01:CDS 60.0%
GGCGGTGACAAGATGTCAGG+TGG - Chr7:39056738-39056757 MsG0780038048.01.T01:CDS 60.0%
! GGCTGGCTGGGGAGAAGAAA+GGG - Chr7:39056659-39056678 MsG0780038048.01.T01:CDS 60.0%
! TACGGTGGAGGTGTGTCTCG+GGG - Chr7:39056553-39056572 MsG0780038048.01.T01:three_prime_UTR 60.0%
!! ATGTGAGTGGTGGTGGTGGG+GGG - Chr7:39056638-39056657 MsG0780038048.01.T01:CDS 60.0%
!! GAGGATGTGAGTGGTGGTGG+TGG - Chr7:39056634-39056653 MsG0780038048.01.T01:exon 60.0%
!! GATGTGAGTGGTGGTGGTGG+GGG - Chr7:39056637-39056656 MsG0780038048.01.T01:CDS 60.0%
!! GGATGTGAGTGGTGGTGGTG+GGG - Chr7:39056636-39056655 MsG0780038048.01.T01:exon 60.0%
!! GGCGGTGGTGGGTGGTTATA+CGG - Chr7:39056717-39056736 MsG0780038048.01.T01:CDS 60.0%
!! GGTGGTGGGTGGTTATACGG+CGG - Chr7:39056720-39056739 MsG0780038048.01.T01:CDS 60.0%
CGTCCGTCGCCTTCGTTCTG+AGG + Chr7:39056517-39056536 None:intergenic 65.0%
TGCCTCGTTACGGTTGGCGG+CGG + Chr7:39056467-39056486 None:intergenic 65.0%
!! CGTCGCCTTCGTTCTGAGGC+AGG + Chr7:39056513-39056532 None:intergenic 65.0%
!! GGGCTGGCTGGGGAGAAGAA+AGG - Chr7:39056658-39056677 MsG0780038048.01.T01:CDS 65.0%
!! TGGTGGTGGTGGGAAGACGG+CGG - Chr7:39056696-39056715 MsG0780038048.01.T01:CDS 65.0%
CTCCGCCGCCAACCGTAACG+AGG - Chr7:39056462-39056481 MsG0780038048.01.T01:three_prime_UTR 70.0%
GCCGCCAACCGTAACGAGGC+AGG - Chr7:39056466-39056485 MsG0780038048.01.T01:three_prime_UTR 70.0%
!! TGGTGGTGGGAAGACGGCGG+CGG - Chr7:39056699-39056718 MsG0780038048.01.T01:CDS 70.0%
GGGAAGACGGCGGCGGTGGT+GGG - Chr7:39056706-39056725 MsG0780038048.01.T01:CDS 75.0%
TGGGAAGACGGCGGCGGTGG+TGG - Chr7:39056705-39056724 MsG0780038048.01.T01:CDS 75.0%
TGGTGGGAAGACGGCGGCGG+TGG - Chr7:39056702-39056721 MsG0780038048.01.T01:CDS 75.0%
!! AAGACGGCGGCGGTGGTGGG+TGG - Chr7:39056709-39056728 MsG0780038048.01.T01:CDS 75.0%
!! GAGTGGTGGTGGTGGGGGGC+TGG - Chr7:39056642-39056661 MsG0780038048.01.T01:CDS 75.0%
!! GTGGTGGTGGGGGGCTGGCT+GGG - Chr7:39056647-39056666 MsG0780038048.01.T01:CDS 75.0%
!! TGGTGGTGGGGGGCTGGCTG+GGG - Chr7:39056648-39056667 MsG0780038048.01.T01:CDS 75.0%
!!! GGTGGTGGTGGGGGGCTGGC+TGG - Chr7:39056646-39056665 MsG0780038048.01.T01:CDS 80.0%
Chromosome Type Strat End Strand Name
Chr7 gene 39056160 39061054 39056160 ID=MsG0780038048.01;Name=MsG0780038048.01
Chr7 mRNA 39056160 39061054 39056160 ID=MsG0780038048.01.T01;Parent=MsG0780038048.01;Name=MsG0780038048.01.T01;_AED=0.41;_eAED=0.41;_QI=138|1|1|1|1|1|3|477|317
Chr7 exon 39060324 39061054 39060324 ID=MsG0780038048.01.T01:exon:9990;Parent=MsG0780038048.01.T01
Chr7 exon 39057832 39057950 39057832 ID=MsG0780038048.01.T01:exon:9991;Parent=MsG0780038048.01.T01
Chr7 exon 39056160 39056878 39056160 ID=MsG0780038048.01.T01:exon:9992;Parent=MsG0780038048.01.T01
Chr7 five_prime_UTR 39060917 39061054 39060917 ID=MsG0780038048.01.T01:five_prime_utr;Parent=MsG0780038048.01.T01
Chr7 CDS 39060324 39060916 39060324 ID=MsG0780038048.01.T01:cds;Parent=MsG0780038048.01.T01
Chr7 CDS 39057832 39057950 39057832 ID=MsG0780038048.01.T01:cds;Parent=MsG0780038048.01.T01
Chr7 CDS 39056637 39056878 39056637 ID=MsG0780038048.01.T01:cds;Parent=MsG0780038048.01.T01
Chr7 three_prime_UTR 39056160 39056636 39056160 ID=MsG0780038048.01.T01:three_prime_utr;Parent=MsG0780038048.01.T01
Gene Sequence

>MsG0780038048.01.T01

ATGGACTTTGGAGGGAACATGTTCTGTCTCAACAACAGAGACCAAAGTAATACTAACAATAACGGTAACAGTAACGGTTTTACTTGGTGTAGTAGTGGTAGTACTACTACTGGTACTGCATGGAACATGAATACTTTTAATGTTAATGAGGAAAACAATTCAGTCTCCGCCGCCAACCGTAACGAGGCAGGTCTAGCTAACGCGCTTATGTACCTGCCTCAGAACGAAGGCGACGGACGACAGTATCGGAGTGCATACGGTGGAGGTGTGTCTCGGGGTCATATGATGCCTGATCCACACCTCACATGTTTGAAGTTGGGGAAGAGGCATTATTTTGAGGATGTGAGTGGTGGTGGTGGGGGGCTGGCTGGGGAGAAGAAAGGGAAAGGAGGATATTGTGGTGGTGGTGGGAAGACGGCGGCGGTGGTGGGTGGTTATACGGCGGTGACAAGATGTCAGGTGGATGGGTGTAACGTGGCATTGATGAATGCTAAGGAGTATCATAGGAGACATAAGGTTTGTGAGATGCATTCAAAGGCACCAAAAGTTGTGGTGTTGGGTTTGGAGCAAAGATTCTGTCAACAGTGTAGCAGGTTCCATGTTGTGTCAGAATTTGATGATTCAAAAAGAAGTTGTAGAAGGAGACTGGCAGGGCACAATGAGAGAAGAAGAAAGAGCTCCCATGATTCTGTTGGGAGGAATTCCTCACAAGGTGGGTGTGCTTTCTCTCTTCTGTCATCTCGGACTGATTCATGGCTTTCACCGGCTGACCTCTCCGTAAGATGCAGTGCTGCATTAAGCGAATTGATAGCAGAAAACCGAGCATCGATAATGGCTAGGCAATACGTCTTAGACAGAGATTGGCATTTGCAGCACCATGCCGTGGAAGATTACAAGGAGATCCATTCCGAGTCCAATTATTTCCCACAACATATGTTTCCGCAGACACATTAG
Protein sequence

>MsG0780038048.01.T01

MDFGGNMFCLNNRDQSNTNNNGNSNGFTWCSSGSTTTGTAWNMNTFNVNEENNSVSAANRNEAGLANALMYLPQNEGDGRQYRSAYGGGVSRGHMMPDPHLTCLKLGKRHYFEDVSGGGGGLAGEKKGKGGYCGGGGKTAAVVGGYTAVTRCQVDGCNVALMNAKEYHRRHKVCEMHSKAPKVVVLGLEQRFCQQCSRFHVVSEFDDSKRSCRRRLAGHNERRRKSSHDSVGRNSSQGGCAFSLLSSRTDSWLSPADLSVRCSAALSELIAENRASIMARQYVLDRDWHLQHHAVEDYKEIHSESNYFPQHMFPQTH*