AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380011496.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380011496.01.T01 MTR_3g005650 98.310 355 6 0 1 355 3 357 0.0 713
MsG0380011496.01.T01 MTR_8g087890 51.648 364 166 7 1 355 1 363 1.66e-128 372
MsG0380011496.01.T01 MTR_3g024510 51.989 352 164 4 9 355 19 370 1.85e-126 368
MsG0380011496.01.T01 MTR_0565s0010 52.408 353 162 5 9 355 13 365 2.75e-125 364
MsG0380011496.01.T01 MTR_3g005660 47.863 351 174 6 13 355 21 370 2.54e-111 329
MsG0380011496.01.T01 MTR_4g035353 45.429 361 187 4 5 355 3 363 7.37e-111 328
MsG0380011496.01.T01 MTR_3g098270 45.628 366 187 5 1 354 3 368 3.17e-106 317
MsG0380011496.01.T01 MTR_2g033930 41.457 357 200 6 6 354 7 362 5.67e-91 277
MsG0380011496.01.T01 MTR_2g033920 41.274 361 203 6 2 354 8 367 3.04e-90 275
MsG0380011496.01.T01 MTR_5g078210 43.114 334 184 5 9 338 7 338 1.69e-89 273
MsG0380011496.01.T01 MTR_2g017955 42.779 367 186 12 3 354 2 359 3.47e-89 273
MsG0380011496.01.T01 MTR_8g087870 41.737 357 190 10 7 355 5 351 1.92e-86 265
MsG0380011496.01.T01 MTR_3g023220 41.265 332 182 7 26 354 31 352 1.11e-84 260
MsG0380011496.01.T01 MTR_2g017925 41.274 361 189 9 6 354 5 354 3.07e-83 257
MsG0380011496.01.T01 MTR_4g122200 40.113 354 203 7 8 354 16 367 7.34e-83 256
MsG0380011496.01.T01 MTR_8g079050 40.108 369 195 8 10 355 11 376 3.66e-81 252
MsG0380011496.01.T01 MTR_2g017875 41.716 338 181 9 26 355 32 361 4.39e-81 251
MsG0380011496.01.T01 MTR_2g017965 40.503 358 194 11 9 354 10 360 1.75e-80 251
MsG0380011496.01.T01 MTR_7g116520 37.110 353 216 6 9 355 14 366 2.37e-77 242
MsG0380011496.01.T01 MTR_2g017915 39.889 361 178 10 6 354 5 338 3.19e-77 241
MsG0380011496.01.T01 MTR_5g093090 37.784 352 206 5 11 352 11 359 1.99e-75 237
MsG0380011496.01.T01 MTR_3g435540 39.157 332 196 5 8 333 2 333 2.11e-75 237
MsG0380011496.01.T01 MTR_3g021460 39.093 353 192 10 10 354 12 349 2.29e-75 236
MsG0380011496.01.T01 MTR_7g116570 36.011 361 220 7 1 355 11 366 3.94e-75 236
MsG0380011496.01.T01 MTR_3g052490 39.660 353 188 8 19 355 23 366 9.45e-75 235
MsG0380011496.01.T01 MTR_7g116510 37.126 334 204 5 28 355 25 358 3.00e-74 234
MsG0380011496.01.T01 MTR_1g069175 37.853 354 208 7 6 352 16 364 7.19e-74 233
MsG0380011496.01.T01 MTR_2g461580 36.975 357 205 7 4 354 7 349 8.67e-74 233
MsG0380011496.01.T01 MTR_1g079540 36.182 351 219 5 7 352 10 360 1.25e-73 233
MsG0380011496.01.T01 MTR_5g009100 36.667 330 203 4 30 353 48 377 1.56e-73 233
MsG0380011496.01.T01 MTR_4g108690 39.806 309 181 3 30 333 29 337 1.68e-73 232
MsG0380011496.01.T01 MTR_1g024890 35.821 335 210 5 23 352 27 361 1.26e-72 230
MsG0380011496.01.T01 MTR_3g052480 38.395 349 199 8 19 355 24 368 1.13e-71 228
MsG0380011496.01.T01 MTR_7g116500 35.775 355 223 5 6 355 11 365 7.16e-71 226
MsG0380011496.01.T01 MTR_3g052580 33.791 364 229 5 1 355 1 361 4.55e-70 224
MsG0380011496.01.T01 MTR_5g078210 44.961 258 138 3 30 283 27 284 6.50e-70 222
MsG0380011496.01.T01 MTR_6g021530 35.393 356 220 6 10 355 7 362 1.38e-69 222
MsG0380011496.01.T01 MTR_4g019880 35.593 354 221 6 6 352 10 363 3.10e-69 221
MsG0380011496.01.T01 MTR_3g052580 33.425 362 229 5 3 355 2 360 3.47e-69 222
MsG0380011496.01.T01 MTR_7g008060 35.475 358 207 7 8 355 9 352 5.20e-68 218
MsG0380011496.01.T01 MTR_1g079530 35.813 363 217 8 1 355 1 355 9.05e-67 215
MsG0380011496.01.T01 MTR_2g033920 41.522 289 161 5 2 283 8 295 5.13e-65 209
MsG0380011496.01.T01 MTR_1g025780 37.540 309 182 7 25 326 38 342 2.12e-64 209
MsG0380011496.01.T01 MTR_5g084750 34.808 339 204 10 6 333 8 340 5.07e-63 205
MsG0380011496.01.T01 MTR_4g056160 36.152 343 193 10 7 333 8 340 1.29e-62 204
MsG0380011496.01.T01 MTR_3g114090 36.246 309 188 7 27 328 35 341 2.21e-60 198
MsG0380011496.01.T01 MTR_3g464730 34.211 342 213 9 1 333 1 339 1.15e-59 196
MsG0380011496.01.T01 MTR_1g025720 37.013 308 186 6 27 328 36 341 1.22e-59 196
MsG0380011496.01.T01 MTR_2g044100 36.391 338 196 8 28 352 43 374 3.21e-59 196
MsG0380011496.01.T01 MTR_4g056280 35.849 318 194 8 26 335 28 343 6.08e-59 194
MsG0380011496.01.T01 MTR_8g074570 34.897 341 207 6 24 353 34 370 6.13e-59 195
MsG0380011496.01.T01 MTR_1g025760 34.347 329 206 6 9 328 58 385 6.59e-59 196
MsG0380011496.01.T01 MTR_5g084770 34.328 335 206 9 6 329 4 335 6.01e-58 191
MsG0380011496.01.T01 MTR_3g114120 35.783 313 185 8 26 328 45 351 6.62e-58 192
MsG0380011496.01.T01 MTR_1g025700 36.170 329 199 7 9 328 28 354 7.12e-58 192
MsG0380011496.01.T01 MTR_2g084585 35.650 331 203 8 11 333 12 340 3.06e-57 190
MsG0380011496.01.T01 MTR_0009s0250 32.258 341 208 9 7 337 9 336 2.20e-56 187
MsG0380011496.01.T01 MTR_8g075230 35.938 320 187 10 24 331 32 345 4.06e-56 187
MsG0380011496.01.T01 MTR_8g022810 34.018 341 204 8 5 328 11 347 1.63e-55 186
MsG0380011496.01.T01 MTR_8g014910 34.328 335 208 9 9 333 11 343 3.20e-55 184
MsG0380011496.01.T01 MTR_3g082830 33.754 317 199 8 21 329 31 344 1.73e-54 183
MsG0380011496.01.T01 MTR_8g031420 32.295 353 220 5 12 354 19 362 1.76e-54 183
MsG0380011496.01.T01 MTR_1g025680 36.306 314 185 9 25 328 31 339 3.68e-54 184
MsG0380011496.01.T01 MTR_5g022630 34.756 328 195 10 24 338 39 360 4.40e-54 182
MsG0380011496.01.T01 MTR_8g022790 34.535 333 205 5 28 355 37 361 5.27e-54 182
MsG0380011496.01.T01 MTR_8g074560 32.884 371 228 9 1 354 1 367 1.71e-52 178
MsG0380011496.01.T01 MTR_2g100620 34.810 316 196 8 26 333 29 342 2.13e-52 177
MsG0380011496.01.T01 MTR_5g022640 33.125 320 197 9 24 331 39 353 4.63e-52 177
MsG0380011496.01.T01 MTR_5g084790 33.531 337 202 10 11 334 16 343 1.17e-51 175
MsG0380011496.01.T01 MTR_2g015080 31.025 361 215 12 9 344 16 367 2.62e-50 172
MsG0380011496.01.T01 MTR_5g074270 31.546 317 204 8 28 334 33 346 3.72e-49 169
MsG0380011496.01.T01 MTR_8g031430 30.601 366 230 7 4 354 8 364 4.12e-48 166
MsG0380011496.01.T01 MTR_8g031390 31.737 334 208 6 28 351 37 360 1.23e-47 166
MsG0380011496.01.T01 MTR_5g093090 35.789 285 170 5 11 285 11 292 2.77e-47 162
MsG0380011496.01.T01 MTR_2g018015 45.192 208 110 4 17 220 25 232 3.80e-47 162
MsG0380011496.01.T01 MTR_0127s0040 35.021 237 148 6 123 355 4 238 1.18e-46 159
MsG0380011496.01.T01 MTR_2g017925 38.362 232 127 7 128 354 31 251 2.74e-46 159
MsG0380011496.01.T01 MTR_8g075200 32.198 323 203 10 24 335 37 354 2.90e-46 162
MsG0380011496.01.T01 MTR_8g074580 29.921 381 213 8 24 353 40 417 6.55e-46 162
MsG0380011496.01.T01 MTR_8g075220 31.231 333 216 8 24 344 36 367 1.96e-45 159
MsG0380011496.01.T01 MTR_8g031400 29.363 361 236 5 4 354 13 364 2.51e-45 159
MsG0380011496.01.T01 MTR_4g087985 30.000 340 218 10 4 326 10 346 1.87e-44 157
MsG0380011496.01.T01 MTR_8g022810 31.268 339 163 9 5 328 11 294 5.52e-43 152
MsG0380011496.01.T01 MTR_5g083040 30.435 322 206 8 19 326 23 340 4.45e-41 147
MsG0380011496.01.T01 MTR_1g025910 32.450 302 191 6 33 326 41 337 7.06e-41 147
MsG0380011496.01.T01 MTR_8g031390 32.384 281 175 5 28 303 37 307 2.72e-39 142
MsG0380011496.01.T01 MTR_5g087690 27.616 344 226 6 23 354 45 377 8.69e-37 137
MsG0380011496.01.T01 MTR_2g017895 30.208 288 171 9 74 355 4 267 4.81e-35 129
MsG0380011496.01.T01 MTR_1g030340 29.086 361 213 10 3 329 13 364 2.42e-33 127
MsG0380011496.01.T01 MTR_1g079590 37.222 180 109 3 23 198 26 205 8.80e-32 119
MsG0380011496.01.T01 MTR_5g093090 37.879 198 111 4 11 198 11 206 1.73e-31 118
MsG0380011496.01.T01 MTR_2g087292 27.697 343 160 10 7 341 9 271 5.11e-31 119
MsG0380011496.01.T01 MTR_7g116870 26.027 365 223 10 9 340 13 363 8.61e-30 118
MsG0380011496.01.T01 MTR_7g033150 24.931 361 229 7 28 355 35 386 1.37e-29 117
MsG0380011496.01.T01 MTR_1108s0010 29.864 221 140 4 128 345 3 211 3.36e-29 112
MsG0380011496.01.T01 MTR_7g087190 28.767 365 211 14 14 340 26 379 2.35e-28 114
MsG0380011496.01.T01 MTR_1g030268 28.333 360 212 12 6 332 16 362 2.77e-28 114
MsG0380011496.01.T01 MTR_6g007100 27.108 332 210 9 27 340 32 349 3.46e-28 113
MsG0380011496.01.T01 MTR_1g030275 28.954 373 223 13 1 339 4 368 4.59e-28 113
MsG0380011496.01.T01 MTR_6g007090 27.147 361 223 11 9 340 17 366 9.78e-28 112
MsG0380011496.01.T01 MTR_1g030230 28.346 381 232 13 1 348 1 373 1.73e-27 111
MsG0380011496.01.T01 MTR_8g028160 26.613 372 234 10 1 340 6 370 1.96e-27 111
MsG0380011496.01.T01 MTR_8g089805 27.322 366 227 11 6 339 16 374 3.22e-27 111
MsG0380011496.01.T01 MTR_6g007095 27.184 309 194 8 55 346 394 688 4.16e-27 112
MsG0380011496.01.T01 MTR_6g007095 27.035 344 206 9 27 340 40 368 1.66e-25 108
MsG0380011496.01.T01 MTR_3g463960 27.108 332 210 10 28 334 44 368 6.96e-27 110
MsG0380011496.01.T01 MTR_3g463950 27.108 332 210 10 28 334 44 368 6.96e-27 110
MsG0380011496.01.T01 MTR_3g463970 27.108 332 210 10 28 334 44 368 6.96e-27 110
MsG0380011496.01.T01 MTR_3g463940 27.108 332 210 10 28 334 44 368 6.96e-27 110
MsG0380011496.01.T01 MTR_2g015580 27.368 380 236 14 3 355 19 385 9.75e-27 109
MsG0380011496.01.T01 MTR_8g038680 27.405 343 211 9 27 340 27 360 1.34e-26 108
MsG0380011496.01.T01 MTR_7g033155 25.490 357 214 7 28 340 38 386 1.78e-26 109
MsG0380011496.01.T01 MTR_3g463930 26.531 343 205 11 28 334 44 375 3.87e-26 108
MsG0380011496.01.T01 MTR_1g030220 27.273 363 223 12 4 332 9 364 9.28e-26 107
MsG0380011496.01.T01 MTR_1g060490 28.228 333 201 13 29 345 38 348 3.71e-25 104
MsG0380011496.01.T01 MTR_3g069780 25.882 340 223 10 28 346 30 361 1.18e-24 103
MsG0380011496.01.T01 MTR_2g015590 28.045 353 227 10 9 339 13 360 1.33e-24 103
MsG0380011496.01.T01 MTR_3g438030 26.724 348 210 13 28 346 30 361 1.80e-24 103
MsG0380011496.01.T01 MTR_2g043980 26.608 342 208 11 10 328 14 335 1.80e-24 102
MsG0380011496.01.T01 MTR_1g092690 26.235 324 199 10 19 326 42 341 9.75e-24 100
MsG0380011496.01.T01 MTR_2g079090 27.301 326 202 11 28 334 30 339 1.46e-23 100
MsG0380011496.01.T01 MTR_4g104240 24.302 358 234 9 10 340 16 363 1.95e-23 100
MsG0380011496.01.T01 MTR_0029s0050 26.912 353 218 13 6 334 3 339 2.93e-23 99.4
MsG0380011496.01.T01 MTR_1g060500 25.472 318 202 9 28 327 40 340 6.64e-23 98.6
MsG0380011496.01.T01 MTR_0029s0100 26.912 353 218 13 6 334 3 339 9.09e-23 98.2
MsG0380011496.01.T01 MTR_2g079080 26.994 326 203 10 28 334 30 339 1.07e-22 97.8
MsG0380011496.01.T01 MTR_3g011860 42.308 104 60 0 210 313 219 322 1.37e-22 97.1
MsG0380011496.01.T01 MTR_7g033165 26.087 368 230 11 12 347 17 374 1.52e-22 97.8
MsG0380011496.01.T01 MTR_2g015630 27.221 349 215 13 33 355 36 371 5.44e-22 96.3
MsG0380011496.01.T01 MTR_1g030268 28.904 301 178 10 6 283 16 303 5.85e-22 95.5
MsG0380011496.01.T01 MTR_4g036375 37.748 151 89 4 26 172 28 177 1.29e-21 91.7
MsG0380011496.01.T01 MTR_7g111780 26.380 326 204 11 28 333 36 345 1.48e-21 94.7
MsG0380011496.01.T01 MTR_3g448360 26.686 341 210 13 28 340 29 357 9.10e-21 92.8
MsG0380011496.01.T01 MTR_5g074210 29.747 158 103 3 185 334 45 202 1.09e-20 89.7
MsG0380011496.01.T01 MTR_7g113860 26.377 345 217 8 25 340 26 362 3.68e-20 90.9
MsG0380011496.01.T01 MTR_7g104220 25.552 317 200 13 26 327 40 335 6.88e-20 89.7
MsG0380011496.01.T01 MTR_7g113860 26.667 345 216 8 25 340 32 368 1.69e-19 89.0
MsG0380011496.01.T01 MTR_6g049220 52.747 91 39 3 26 112 28 118 3.14e-19 84.3
MsG0380011496.01.T01 MTR_1g092750 25.776 322 205 10 19 326 31 332 4.68e-19 87.4
MsG0380011496.01.T01 MTR_1g092740 26.613 248 161 5 22 267 32 260 1.11e-18 86.3
MsG0380011496.01.T01 MTR_1g079570 27.407 135 97 1 219 352 4 138 6.58e-18 80.1
MsG0380011496.01.T01 MTR_3g069520 26.225 347 211 14 28 346 30 359 3.04e-17 82.4
MsG0380011496.01.T01 MTR_1g082390 24.011 354 225 10 8 329 11 352 2.00e-16 80.1
MsG0380011496.01.T01 MTR_1g092760 24.534 322 210 10 18 326 29 330 8.47e-16 77.8
MsG0380011496.01.T01 MTR_7g111780 25.483 259 160 9 94 333 2 246 1.32e-15 76.3
MsG0380011496.01.T01 MTR_2g015670 27.761 335 199 12 28 339 31 345 4.96e-15 75.9
MsG0380011496.01.T01 MTR_1g030265 25.085 295 176 9 79 339 53 336 5.82e-15 75.5
MsG0380011496.01.T01 MTR_2g015650 26.301 365 234 12 3 339 2 359 1.27e-14 74.7
MsG0380011496.01.T01 MTR_8g089805 23.958 288 185 9 82 339 23 306 5.85e-14 72.4
MsG0380011496.01.T01 MTR_4g056220 29.204 113 79 1 234 345 77 189 1.78e-13 68.9
MsG0380011496.01.T01 MTR_4g036385 32.432 111 73 2 227 335 17 127 7.61e-13 65.5
MsG0380011496.01.T01 MTR_7g033165 25.540 278 175 9 12 267 17 284 2.47e-12 67.4
MsG0380011496.01.T01 MTR_7g113860 24.828 290 183 7 80 340 11 294 4.38e-12 66.6
MsG0380011496.01.T01 MTR_6g049230 28.125 128 89 2 194 318 67 194 6.65e-12 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380011496.01.T01 AT1G71691 69.789 331 99 1 26 355 53 383 6.00e-176 494
MsG0380011496.01.T01 AT1G71691 66.667 279 92 1 78 355 4 282 3.47e-142 404
MsG0380011496.01.T01 AT1G71691 70.270 259 76 1 26 283 53 311 2.96e-130 375
MsG0380011496.01.T01 AT1G29670 50.556 360 172 6 1 355 5 363 6.25e-125 363
MsG0380011496.01.T01 AT1G29670 50.556 360 172 6 1 355 73 431 2.20e-124 365
MsG0380011496.01.T01 AT5G45670 51.821 357 159 6 12 355 6 362 2.33e-120 352
MsG0380011496.01.T01 AT1G29660 49.030 361 177 6 1 355 5 364 2.80e-119 349
MsG0380011496.01.T01 AT4G18970 50.893 336 159 5 26 355 26 361 1.92e-115 339
MsG0380011496.01.T01 AT4G18970 50.893 336 159 5 26 355 26 361 3.75e-114 338
MsG0380011496.01.T01 AT1G33811 48.824 340 163 6 26 355 32 370 6.26e-114 336
MsG0380011496.01.T01 AT1G71250 48.094 341 171 4 21 355 33 373 9.18e-111 328
MsG0380011496.01.T01 AT5G08460 47.207 358 177 7 10 355 28 385 1.74e-109 325
MsG0380011496.01.T01 AT5G15720 49.112 338 163 5 26 355 28 364 2.92e-109 324
MsG0380011496.01.T01 AT2G19060 41.369 336 170 9 15 339 17 336 9.74e-84 258
MsG0380011496.01.T01 AT5G15720 45.455 286 148 4 78 355 48 333 6.24e-83 255
MsG0380011496.01.T01 AT2G19010 40.057 352 190 9 10 354 10 347 8.13e-83 256
MsG0380011496.01.T01 AT2G19010 40.057 352 190 9 10 354 40 377 4.95e-82 254
MsG0380011496.01.T01 AT2G19050 37.741 363 192 10 9 355 5 349 4.20e-79 246
MsG0380011496.01.T01 AT4G10950 37.237 333 203 4 26 352 69 401 1.21e-78 247
MsG0380011496.01.T01 AT5G37690 40.299 335 191 5 11 337 6 339 1.16e-77 243
MsG0380011496.01.T01 AT5G15720 48.872 266 127 5 26 283 28 292 4.47e-77 239
MsG0380011496.01.T01 AT2G23540 37.027 370 208 8 9 355 20 387 9.95e-77 241
MsG0380011496.01.T01 AT4G10950 36.937 333 200 5 26 352 69 397 1.09e-75 239
MsG0380011496.01.T01 AT4G30140 42.216 334 174 9 23 352 28 346 1.57e-75 237
MsG0380011496.01.T01 AT5G33370 35.362 345 218 4 13 352 15 359 1.16e-74 235
MsG0380011496.01.T01 AT1G74460 39.053 338 193 6 11 337 7 342 2.73e-74 234
MsG0380011496.01.T01 AT3G50400 36.631 374 210 9 7 355 3 374 5.75e-74 234
MsG0380011496.01.T01 AT5G37690 39.466 337 183 7 11 337 6 331 1.05e-72 229
MsG0380011496.01.T01 AT5G41890 38.968 349 184 9 30 355 33 375 1.37e-72 230
MsG0380011496.01.T01 AT3G04290 36.391 327 203 4 28 349 29 355 1.70e-70 224
MsG0380011496.01.T01 AT4G28780 36.637 333 206 4 28 355 31 363 1.87e-70 224
MsG0380011496.01.T01 AT5G18430 37.069 348 209 6 9 349 12 356 3.48e-70 224
MsG0380011496.01.T01 AT2G19050 41.264 269 142 6 9 267 5 267 2.56e-65 208
MsG0380011496.01.T01 AT5G55050 35.920 348 205 9 20 352 29 373 3.37e-63 206
MsG0380011496.01.T01 AT2G04570 34.493 345 209 11 6 338 4 343 1.44e-59 196
MsG0380011496.01.T01 AT1G75890 35.185 324 198 9 24 338 43 363 1.03e-57 191
MsG0380011496.01.T01 AT3G53100 37.609 343 200 9 1 333 1 339 1.17e-57 191
MsG0380011496.01.T01 AT1G75890 35.185 324 198 9 24 338 72 392 2.07e-57 191
MsG0380011496.01.T01 AT2G03980 34.969 326 195 8 23 338 38 356 9.55e-57 189
MsG0380011496.01.T01 AT2G03980 34.969 326 195 8 23 338 38 356 9.55e-57 189
MsG0380011496.01.T01 AT2G03980 34.969 326 195 8 23 338 38 356 9.55e-57 189
MsG0380011496.01.T01 AT2G03980 34.969 326 195 8 23 338 38 356 9.55e-57 189
MsG0380011496.01.T01 AT1G75880 35.625 320 195 8 25 335 49 366 1.45e-56 189
MsG0380011496.01.T01 AT5G22810 35.849 318 192 8 26 333 32 347 1.62e-56 188
MsG0380011496.01.T01 AT5G45950 33.436 326 210 6 14 336 26 347 4.47e-56 187
MsG0380011496.01.T01 AT2G42990 32.676 355 224 9 1 345 1 350 6.35e-56 186
MsG0380011496.01.T01 AT5G63170 38.066 331 179 12 6 326 5 319 1.13e-55 185
MsG0380011496.01.T01 AT1G75890 33.929 336 199 9 24 338 43 376 1.85e-55 186
MsG0380011496.01.T01 AT5G42170 34.347 329 199 9 26 344 48 369 1.98e-55 186
MsG0380011496.01.T01 AT1G75880 35.312 320 195 9 25 335 49 365 6.49e-55 184
MsG0380011496.01.T01 AT4G26790 33.436 326 194 9 22 333 23 339 8.40e-55 183
MsG0380011496.01.T01 AT4G26790 33.436 326 194 9 22 333 23 339 8.40e-55 183
MsG0380011496.01.T01 AT5G03810 35.503 338 200 9 8 329 2 337 1.27e-54 183
MsG0380011496.01.T01 AT5G03820 35.103 339 201 8 8 329 5 341 1.42e-54 183
MsG0380011496.01.T01 AT5G03820 35.103 339 201 8 8 329 33 369 3.64e-54 183
MsG0380011496.01.T01 AT4G16230 46.429 224 108 5 9 221 5 227 7.04e-54 178
MsG0380011496.01.T01 AT1G73610 35.922 309 178 9 24 326 31 325 4.90e-53 179
MsG0380011496.01.T01 AT5G33370 35.870 276 172 4 13 283 15 290 6.81e-53 178
MsG0380011496.01.T01 AT1G75900 30.484 351 222 9 8 342 17 361 6.98e-52 176
MsG0380011496.01.T01 AT3G14225 33.333 345 215 6 25 355 34 377 1.29e-51 176
MsG0380011496.01.T01 AT3G14225 32.044 362 221 7 11 355 20 373 2.43e-51 175
MsG0380011496.01.T01 AT1G23500 35.714 336 186 11 1 326 11 326 2.56e-51 174
MsG0380011496.01.T01 AT1G20120 32.609 322 203 9 27 338 77 394 3.75e-51 175
MsG0380011496.01.T01 AT1G20132 33.746 323 203 8 24 338 57 376 4.70e-51 174
MsG0380011496.01.T01 AT1G53920 31.367 373 227 9 7 355 17 384 9.68e-50 171
MsG0380011496.01.T01 AT1G53940 34.104 346 207 8 25 355 36 375 1.35e-49 171
MsG0380011496.01.T01 AT1G59406 33.739 329 197 11 11 326 10 330 1.68e-49 169
MsG0380011496.01.T01 AT1G59030 33.739 329 197 11 11 326 10 330 1.68e-49 169
MsG0380011496.01.T01 AT1G58725 33.739 329 197 11 11 326 10 330 1.68e-49 169
MsG0380011496.01.T01 AT5G40990 33.913 345 209 7 25 355 34 373 2.20e-49 170
MsG0380011496.01.T01 AT3G14820 33.125 320 198 10 25 335 29 341 3.58e-49 169
MsG0380011496.01.T01 AT2G30310 32.317 328 209 9 10 327 16 340 7.93e-49 168
MsG0380011496.01.T01 AT1G71120 32.659 346 209 9 20 353 23 356 4.76e-48 166
MsG0380011496.01.T01 AT2G30220 33.123 317 199 9 27 333 32 345 1.59e-47 164
MsG0380011496.01.T01 AT3G16370 33.750 320 200 9 23 333 25 341 3.05e-47 164
MsG0380011496.01.T01 AT2G31540 32.416 327 210 8 18 335 25 349 7.21e-47 163
MsG0380011496.01.T01 AT1G06990 32.000 325 206 8 21 333 27 348 7.60e-47 163
MsG0380011496.01.T01 AT5G45960 30.745 322 210 8 24 334 43 362 2.31e-46 162
MsG0380011496.01.T01 AT1G58430 32.710 321 203 9 18 328 25 342 3.18e-46 161
MsG0380011496.01.T01 AT1G20135 31.804 327 202 9 8 326 7 320 9.22e-46 159
MsG0380011496.01.T01 AT1G75920 31.861 317 193 9 20 326 21 324 2.71e-45 158
MsG0380011496.01.T01 AT2G40250 28.923 325 216 6 26 338 34 355 1.55e-44 157
MsG0380011496.01.T01 AT2G24560 30.696 316 208 8 27 333 33 346 3.32e-43 153
MsG0380011496.01.T01 AT1G20130 31.132 318 201 8 24 326 180 494 7.08e-43 155
MsG0380011496.01.T01 AT1G20130 31.132 318 201 8 24 326 200 514 9.99e-43 155
MsG0380011496.01.T01 AT1G58520 31.833 311 187 10 26 326 28 323 4.72e-42 150
MsG0380011496.01.T01 AT1G58525 31.833 311 187 10 26 326 28 323 4.72e-42 150
MsG0380011496.01.T01 AT1G75920 30.422 332 193 10 20 326 16 334 1.74e-41 149
MsG0380011496.01.T01 AT1G53990 30.811 370 220 11 9 355 8 364 3.87e-41 148
MsG0380011496.01.T01 AT3G43570 31.024 332 189 11 3 326 2 301 1.91e-40 145
MsG0380011496.01.T01 AT1G75930 31.098 328 200 13 11 326 11 324 6.29e-39 142
MsG0380011496.01.T01 AT1G75910 29.819 332 211 9 7 326 3 324 1.05e-38 141
MsG0380011496.01.T01 AT2G04020 38.158 228 128 6 6 227 21 241 9.28e-38 136
MsG0380011496.01.T01 AT2G04020 38.158 228 128 6 6 227 21 241 3.11e-37 136
MsG0380011496.01.T01 AT1G75920 28.662 314 176 8 20 326 21 293 2.36e-35 131
MsG0380011496.01.T01 AT3G43550 32.302 291 181 9 3 283 2 286 2.52e-35 130
MsG0380011496.01.T01 AT1G53940 34.701 268 160 7 25 283 36 297 3.17e-35 130
MsG0380011496.01.T01 AT1G54010 28.652 356 227 12 9 352 14 354 1.88e-34 130
MsG0380011496.01.T01 AT1G75920 29.831 295 184 9 42 326 15 296 3.13e-34 128
MsG0380011496.01.T01 AT1G54000 27.500 360 234 11 6 352 9 354 1.44e-33 128
MsG0380011496.01.T01 AT1G54030 27.795 331 215 11 29 355 53 363 1.83e-33 128
MsG0380011496.01.T01 AT1G54020 27.859 341 219 12 21 352 24 346 2.78e-33 127
MsG0380011496.01.T01 AT2G27360 28.286 350 224 9 13 339 18 363 1.05e-31 123
MsG0380011496.01.T01 AT4G16233 44.444 126 69 1 231 355 5 130 1.20e-31 116
MsG0380011496.01.T01 AT1G28570 28.448 348 203 13 24 339 30 363 1.21e-31 123
MsG0380011496.01.T01 AT3G14220 29.674 337 209 14 27 352 31 350 3.57e-31 121
MsG0380011496.01.T01 AT1G31550 27.701 361 222 10 1 333 9 358 5.75e-31 121
MsG0380011496.01.T01 AT1G28640 28.756 386 195 17 6 340 9 365 2.26e-30 119
MsG0380011496.01.T01 AT1G31550 27.624 362 218 10 1 333 9 355 7.35e-30 118
MsG0380011496.01.T01 AT1G28650 27.374 358 224 9 9 339 18 366 9.29e-30 118
MsG0380011496.01.T01 AT1G28660 27.548 363 227 9 6 339 9 364 1.34e-29 117
MsG0380011496.01.T01 AT1G28580 27.855 359 223 12 9 339 16 366 1.81e-29 117
MsG0380011496.01.T01 AT1G28670 28.022 364 225 10 6 339 9 365 3.98e-29 116
MsG0380011496.01.T01 AT1G67830 28.235 340 203 12 25 332 27 357 4.52e-28 113
MsG0380011496.01.T01 AT2G24560 29.368 269 179 8 27 286 33 299 6.00e-28 111
MsG0380011496.01.T01 AT1G28660 27.548 363 226 10 6 339 9 363 6.31e-28 112
MsG0380011496.01.T01 AT1G28600 26.016 369 233 11 1 339 1 359 1.95e-27 111
MsG0380011496.01.T01 AT3G48460 25.474 369 216 13 12 340 15 364 4.64e-27 110
MsG0380011496.01.T01 AT1G28610 26.479 355 219 13 1 327 7 347 3.82e-26 108
MsG0380011496.01.T01 AT2G31550 28.641 206 142 3 132 333 2 206 4.74e-26 104
MsG0380011496.01.T01 AT3G14210 26.781 351 215 14 22 352 28 356 5.64e-26 107
MsG0380011496.01.T01 AT3G27950 26.053 380 243 10 5 355 2 372 6.90e-26 107
MsG0380011496.01.T01 AT4G01130 24.457 368 235 9 10 343 13 371 8.94e-26 107
MsG0380011496.01.T01 AT5G03610 29.260 311 191 13 29 326 44 338 2.52e-25 105
MsG0380011496.01.T01 AT5G14450 26.287 369 227 10 7 339 14 373 5.50e-25 104
MsG0380011496.01.T01 AT1G28590 25.967 362 218 14 12 339 20 365 1.50e-24 103
MsG0380011496.01.T01 AT3G26430 28.955 335 201 11 25 329 28 355 9.77e-24 101
MsG0380011496.01.T01 AT5G03600 26.582 316 195 10 24 326 10 301 1.32e-22 97.1
MsG0380011496.01.T01 AT5G03600 26.582 316 195 10 24 326 45 336 1.36e-22 97.8
MsG0380011496.01.T01 AT4G16220 49.558 113 52 4 8 116 9 120 1.43e-22 95.5
MsG0380011496.01.T01 AT1G54030 27.413 259 166 9 29 283 53 293 3.91e-22 95.5
MsG0380011496.01.T01 AT3G05180 26.149 348 214 11 25 340 33 369 1.70e-21 94.7
MsG0380011496.01.T01 AT3G09930 26.183 317 194 10 29 326 40 335 3.04e-20 90.9
MsG0380011496.01.T01 AT3G09930 26.183 317 194 10 29 326 40 335 3.04e-20 90.9
MsG0380011496.01.T01 AT1G56670 25.352 355 224 11 4 333 14 352 1.37e-19 89.4
MsG0380011496.01.T01 AT4G01130 25.085 295 191 8 10 283 13 298 2.97e-19 87.8
MsG0380011496.01.T01 AT1G54020 24.910 277 185 9 82 352 1 260 6.40e-19 86.3
MsG0380011496.01.T01 AT1G54020 24.910 277 185 9 82 352 1 260 6.40e-19 86.3
MsG0380011496.01.T01 AT1G54020 24.910 277 185 9 82 352 1 260 6.40e-19 86.3
MsG0380011496.01.T01 AT3G62280 24.484 339 219 10 27 341 35 360 1.44e-18 86.3
MsG0380011496.01.T01 AT1G54790 24.638 345 219 11 27 340 31 365 2.50e-17 82.8
MsG0380011496.01.T01 AT1G09390 24.363 353 216 12 11 333 18 349 2.51e-17 82.8
MsG0380011496.01.T01 AT1G28580 25.086 291 187 10 72 339 3 285 9.30e-17 80.5
MsG0380011496.01.T01 AT1G54020 24.878 205 147 4 152 352 10 211 5.82e-16 77.0
MsG0380011496.01.T01 AT4G01130 21.993 291 190 8 84 343 1 285 4.06e-15 75.5
MsG0380011496.01.T01 AT1G54790 22.826 368 239 11 8 340 7 364 5.14e-15 75.9
MsG0380011496.01.T01 AT1G28610 33.113 151 89 4 1 142 7 154 6.29e-15 73.9
MsG0380011496.01.T01 AT1G28600 27.962 211 134 7 1 199 1 205 2.46e-14 72.0
MsG0380011496.01.T01 AT3G14210 25.641 234 151 8 135 352 2 228 3.56e-14 72.0
MsG0380011496.01.T01 AT2G36325 25.879 313 193 14 28 323 47 337 8.86e-13 68.9
MsG0380011496.01.T01 AT1G56670 24.667 300 190 9 4 283 14 297 1.34e-11 65.1
MsG0380011496.01.T01 AT1G53970 48.571 70 32 2 21 88 15 82 3.87e-11 59.7
MsG0380011496.01.T01 AT1G53970 48.571 70 32 2 21 88 15 82 3.87e-11 59.7

Find 84 sgRNAs with CRISPR-Local

Find 259 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGTCCATTGTACTGATTTC+TGG 0.105484 3:+403492 None:intergenic
AACACATAACGGTTTCTATT+AGG 0.156071 3:+401435 None:intergenic
TGACAGTTCCCGCATGTTTC+AGG 0.200489 3:-402947 MsG0380011496.01.T01:CDS
TCCATTGTATGCAGGAATTA+AGG 0.200828 3:+404281 None:intergenic
ATAGAAACCGTTATGTGTTT+TGG 0.234977 3:-401431 MsG0380011496.01.T01:CDS
TGAACATGGCAGGAACATTT+TGG 0.236523 3:+405852 None:intergenic
TGATTTCTGGTGTTATAATT+AGG 0.237352 3:+403505 None:intergenic
AGAAGCAGTTAACATTCTTA+TGG 0.245755 3:-401391 MsG0380011496.01.T01:CDS
AATCAACTTACTGGAAATAT+TGG 0.248422 3:-403613 MsG0380011496.01.T01:CDS
GTTCCTGCCATGTTCATATT+TGG 0.257412 3:-405845 MsG0380011496.01.T01:CDS
TTCTATTAGGGCATGGAGTT+TGG 0.264599 3:+401448 None:intergenic
AAATTTGTGATTGCTGGATT+AGG 0.286484 3:-403123 MsG0380011496.01.T01:CDS
GGTGACTCACTTATTGATAA+TGG 0.288022 3:-405824 MsG0380011496.01.T01:CDS
ACACATAACGGTTTCTATTA+GGG 0.291204 3:+401436 None:intergenic
TCATAGAGGCTTTACAATCT+TGG 0.298958 3:-403153 MsG0380011496.01.T01:intron
GTTGATAGGATAAACAAAAT+TGG 0.302716 3:+401344 None:intergenic
TGGAGTATCTCAAATATTCT+TGG 0.322971 3:-405909 MsG0380011496.01.T01:CDS
AATTTGTGATTGCTGGATTA+GGG 0.341456 3:-403122 MsG0380011496.01.T01:CDS
TAGGCATAAGGTAGTTGTTT+AGG 0.350426 3:+403524 None:intergenic
GCAAGGAAATTTGTGATTGC+TGG 0.351908 3:-403129 MsG0380011496.01.T01:CDS
GAAGCAGTTAACATTCTTAT+GGG 0.360735 3:-401390 MsG0380011496.01.T01:CDS
AACTTGTTGATGGCTAAGTT+TGG 0.363571 3:-405929 None:intergenic
GATTGCTGGATTAGGGCTAT+TGG 0.366814 3:-403115 MsG0380011496.01.T01:CDS
AATACATTGAATCAACTTAC+TGG 0.367293 3:-403622 MsG0380011496.01.T01:CDS
AAATATTGGAGCAGATAATA+TGG 0.380686 3:-403599 MsG0380011496.01.T01:CDS
AATAGAGGGTGTTGTGGCCT+TGG 0.400540 3:-401504 MsG0380011496.01.T01:CDS
CCATATGGTATTGACTTCAA+TGG 0.404544 3:-405758 MsG0380011496.01.T01:CDS
TGCATATTCTTTGTTGGAAT+GGG 0.406897 3:-403559 MsG0380011496.01.T01:CDS
AATATTCTTGGTGCTTATCA+TGG 0.407270 3:-405897 MsG0380011496.01.T01:CDS
TCAAGGTGCATATTCTTTGT+TGG 0.407331 3:-403565 MsG0380011496.01.T01:CDS
TTTCTAAGTTGTTCATCAAA+TGG 0.410995 3:+403652 None:intergenic
ATTGCTGGATTAGGGCTATT+GGG 0.411186 3:-403114 MsG0380011496.01.T01:CDS
GTGCATATTCTTTGTTGGAA+TGG 0.415630 3:-403560 MsG0380011496.01.T01:CDS
AACTATGCTTCAGCTGCTGC+TGG 0.416729 3:-404228 MsG0380011496.01.T01:CDS
ACTGTCAATGAATATGAATC+TGG 0.420747 3:+402963 None:intergenic
CCATTGTATGCAGGAATTAA+GGG 0.432472 3:+404282 None:intergenic
TGGTGTTATAATTAGGCATA+AGG 0.444978 3:+403512 None:intergenic
TACACTATTGTTGATGAGAT+AGG 0.446947 3:-405707 MsG0380011496.01.T01:intron
CCGACTGGTCGCTTCTCAAA+TGG 0.461318 3:-405731 MsG0380011496.01.T01:CDS
ACAGGGGATCAAATGCTTCA+TGG 0.465834 3:-404255 MsG0380011496.01.T01:CDS
TTTGACCTCTGTTTCTTCCA+AGG 0.467001 3:+401487 None:intergenic
GACTTCAATGGTGGACCGAC+TGG 0.471274 3:-405746 MsG0380011496.01.T01:CDS
GTGCTTATCATGGTCTTAAG+TGG 0.474885 3:-405887 MsG0380011496.01.T01:CDS
GCAAGTTGCTGAATGTTGAT+AGG 0.475041 3:+401330 None:intergenic
CCATTGAAGTCAATACCATA+TGG 0.485315 3:+405758 None:intergenic
GTCTTAAGTGGTGCAGTCAC+AGG 0.491965 3:-405875 MsG0380011496.01.T01:CDS
GTACTTTGAGACAATATGCT+TGG 0.495491 3:+403084 None:intergenic
AGTTTCTTCCTGTGTCATCA+AGG 0.499279 3:+404202 None:intergenic
CCCTTAATTCCTGCATACAA+TGG 0.500965 3:-404282 MsG0380011496.01.T01:CDS
ATTAATGCAGCTGAACTGCT+TGG 0.518858 3:-404309 MsG0380011496.01.T01:intron
AAAATCTTACAGTGAGTTGG+TGG 0.521224 3:+403437 None:intergenic
TAACATTCTTATGGGAAGGA+TGG 0.522951 3:-401382 MsG0380011496.01.T01:CDS
AGAATGTTAACTGCTTCTGT+TGG 0.524513 3:+401396 None:intergenic
ACAACAGTATGCTGATCTCT+TGG 0.527275 3:-403473 MsG0380011496.01.T01:CDS
CCTGCATACAATGGAGCCAC+AGG 0.527292 3:-404273 MsG0380011496.01.T01:CDS
GGCTTTACAATCTTGGAGCA+AGG 0.555445 3:-403146 MsG0380011496.01.T01:CDS
GGATTTACTGATGTGAATAG+AGG 0.556382 3:-401519 MsG0380011496.01.T01:CDS
CCTGTGGCTCCATTGTATGC+AGG 0.556576 3:+404273 None:intergenic
CAGTTAACATTCTTATGGGA+AGG 0.561855 3:-401386 MsG0380011496.01.T01:CDS
AAGAATTTCCTGAAACATGC+GGG 0.562469 3:+402939 None:intergenic
ATATGGCCACACAACTATCA+AGG 0.568666 3:-403582 MsG0380011496.01.T01:CDS
TAACGGTTTCTATTAGGGCA+TGG 0.577323 3:+401441 None:intergenic
ATGCATCCCAAAACACATAA+CGG 0.580317 3:+401424 None:intergenic
TTAGGGCATGGAGTTTGGAA+TGG 0.580915 3:+401453 None:intergenic
AAAGAATTTCCTGAAACATG+CGG 0.581975 3:+402938 None:intergenic
TCACCAAATATGAACATGGC+AGG 0.584345 3:+405842 None:intergenic
ATGAATATGAATCTGGAACC+AGG 0.592151 3:+402970 None:intergenic
GATTTACTGATGTGAATAGA+GGG 0.596598 3:-401518 MsG0380011496.01.T01:CDS
ACCCTTCAATGAAAATGTGA+AGG 0.599178 3:-403022 MsG0380011496.01.T01:CDS
TATGGTATTGACTTCAATGG+TGG 0.612409 3:-405755 MsG0380011496.01.T01:CDS
CTGCATACAATGGAGCCACA+GGG 0.613356 3:-404272 MsG0380011496.01.T01:CDS
ATTGTTGAGATTGCTCAACA+TGG 0.613583 3:+402999 None:intergenic
AACACCAGAAATCAGTACAA+TGG 0.625168 3:-403496 MsG0380011496.01.T01:CDS
AATCTCAACAATAATCTACC+TGG 0.630593 3:-402988 MsG0380011496.01.T01:CDS
ATGAAGCATTTGATCCCCTG+TGG 0.639449 3:+404257 None:intergenic
GCTGGAATCCTTGATGACAC+AGG 0.646017 3:-404210 MsG0380011496.01.T01:CDS
TGAGTCACCAAATATGAACA+TGG 0.664105 3:+405838 None:intergenic
TAATGGTAACAATAACAACA+TGG 0.669382 3:-405807 MsG0380011496.01.T01:CDS
CCATTTGAGAAGCGACCAGT+CGG 0.684087 3:+405731 None:intergenic
TGTGGCCTTGGAAGAAACAG+AGG 0.691165 3:-401492 MsG0380011496.01.T01:CDS
TGCATACAATGGAGCCACAG+GGG 0.692778 3:-404271 MsG0380011496.01.T01:CDS
ATATTGTCTCAAAGTACGAG+TGG 0.701049 3:-403078 MsG0380011496.01.T01:CDS
TATGCACCTTGATAGTTGTG+TGG 0.718978 3:+403576 None:intergenic
GATGTGAATAGAGGGTGTTG+TGG 0.728907 3:-401510 MsG0380011496.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATAAAATAATTTTTTATTT+TGG - Chr3:402792-402811 MsG0380011496.01.T01:intron 0.0%
!!! AATCTAAAGTAATTTATTTT+TGG + Chr3:403460-403479 None:intergenic 10.0%
!!! ATAACTAAATTAAATTTTTG+AGG + Chr3:404954-404973 None:intergenic 10.0%
!!! TTACTTTAAAAAATGTTTTA+AGG - Chr3:402541-402560 MsG0380011496.01.T01:intron 10.0%
!!! TTTTTTAACTTATTGTTTTT+TGG - Chr3:402062-402081 MsG0380011496.01.T01:intron 10.0%
!! AACAAATTTCGATAATAATT+TGG - Chr3:404446-404465 MsG0380011496.01.T01:intron 15.0%
!! AACATAAGAGATATAAATAT+TGG - Chr3:401729-401748 MsG0380011496.01.T01:intron 15.0%
!! ATATTTGAAAACAATTTAGA+TGG - Chr3:405412-405431 MsG0380011496.01.T01:intron 15.0%
!! ATTTGCAAAAGAAAAATATT+GGG - Chr3:403113-403132 MsG0380011496.01.T01:CDS 15.0%
!! TATTATATTCATTAATCATC+CGG + Chr3:404497-404516 None:intergenic 15.0%
!! TATTTGCAAAAGAAAAATAT+TGG - Chr3:403112-403131 MsG0380011496.01.T01:CDS 15.0%
!!! ACTCACTAATATTTTTTTAA+GGG - Chr3:402663-402682 MsG0380011496.01.T01:intron 15.0%
!!! TACTCACTAATATTTTTTTA+AGG - Chr3:402662-402681 MsG0380011496.01.T01:intron 15.0%
!! AAAACAATTTAGATGGTTAA+TGG - Chr3:405419-405438 MsG0380011496.01.T01:intron 20.0%
!! AAATGGATACAAATAGAAAA+TGG - Chr3:401665-401684 MsG0380011496.01.T01:intron 20.0%
!! AACAACAAAAAAAGTTGTAT+CGG + Chr3:404656-404675 None:intergenic 20.0%
!! AATTTCGATAATAATTTGGA+TGG - Chr3:404450-404469 MsG0380011496.01.T01:intron 20.0%
!! ATAACCAATTAATTATTCAG+TGG + Chr3:403545-403564 None:intergenic 20.0%
!! CAACAATTTATATTAAGAGA+AGG + Chr3:401812-401831 None:intergenic 20.0%
!! CATAAAAGATTACCATTTAA+AGG + Chr3:402725-402744 None:intergenic 20.0%
!! CCAAAAAAAAAAAAAAGTTG+AGG - Chr3:405072-405091 MsG0380011496.01.T01:intron 20.0%
!! CTTCAAATTAATTAAGACTT+AGG + Chr3:402183-402202 None:intergenic 20.0%
!! TAATATAAATTGTTGTCTCA+AGG - Chr3:401817-401836 MsG0380011496.01.T01:intron 20.0%
!! TATCACAAACAAATTTGAAA+TGG + Chr3:401765-401784 None:intergenic 20.0%
!! TTATAATGATACATTAGTTG+AGG - Chr3:404970-404989 MsG0380011496.01.T01:intron 20.0%
!! TTATGTTTAAACGCAAATTA+TGG - Chr3:404576-404595 MsG0380011496.01.T01:intron 20.0%
!! TTGAACAAATGAAATCATTA+TGG - Chr3:404870-404889 MsG0380011496.01.T01:intron 20.0%
!!! AAAATGTTTTAAGGTTTTTC+AGG - Chr3:402550-402569 MsG0380011496.01.T01:intron 20.0%
!!! CAACTTTTTTTTTTTTTTGG+TGG + Chr3:405072-405091 None:intergenic 20.0%
!!! CCTCAACTTTTTTTTTTTTT+TGG + Chr3:405075-405094 None:intergenic 20.0%
!!! GATTAAATTAGTGTGTTTTT+TGG - Chr3:401881-401900 MsG0380011496.01.T01:intron 20.0%
!!! TCATTTTGATTAAAGATTTG+AGG + Chr3:405136-405155 None:intergenic 20.0%
!!! TCTCATTTTGATAATTTTAC+CGG + Chr3:405245-405264 None:intergenic 20.0%
!!! TTTGTTTTTTTGTTGTTGAT+TGG + Chr3:402438-402457 None:intergenic 20.0%
! AAAAACCCTAATAGAACATT+CGG - Chr3:403224-403243 MsG0380011496.01.T01:intron 25.0%
! AAATATTGGAGCAGATAATA+TGG - Chr3:403641-403660 MsG0380011496.01.T01:CDS 25.0%
! AAGACAATTGATGAATAAGA+GGG + Chr3:401561-401580 None:intergenic 25.0%
! AATACATTGAATCAACTTAC+TGG - Chr3:403618-403637 MsG0380011496.01.T01:CDS 25.0%
! AATCAACTTACTGGAAATAT+TGG - Chr3:403627-403646 MsG0380011496.01.T01:CDS 25.0%
! AATTAATTAAGACTTAGGTG+TGG + Chr3:402178-402197 None:intergenic 25.0%
! ATGTGGTTAATTATGTTTAG+TGG + Chr3:405553-405572 None:intergenic 25.0%
! CTTTAGATCTTTAAACATGT+TGG - Chr3:405369-405388 MsG0380011496.01.T01:intron 25.0%
! TAAAAAATCTTACAGTGAGT+TGG + Chr3:403809-403828 None:intergenic 25.0%
! TAAATATGTGTTACATACAC+CGG - Chr3:404475-404494 MsG0380011496.01.T01:intron 25.0%
! TAAGACAATTGATGAATAAG+AGG + Chr3:401562-401581 None:intergenic 25.0%
! TAATGGTAACAATAACAACA+TGG - Chr3:401433-401452 MsG0380011496.01.T01:CDS 25.0%
! TAGATTTGTAAAATTGAGTC+TGG + Chr3:403497-403516 None:intergenic 25.0%
! TAGTGAGTAAAAAGAAACTA+GGG + Chr3:402651-402670 None:intergenic 25.0%
! TGAGCATTCTTTATAGTAAA+AGG - Chr3:402339-402358 MsG0380011496.01.T01:intron 25.0%
! TTAATCTACCTAATTTGACT+AGG + Chr3:402410-402429 None:intergenic 25.0%
! TTAGTGAGTAAAAAGAAACT+AGG + Chr3:402652-402671 None:intergenic 25.0%
! TTTCTAAGTTGTTCATCAAA+TGG + Chr3:403591-403610 None:intergenic 25.0%
!! AAAGCTAACTATTTTCCATA+TGG - Chr3:401467-401486 MsG0380011496.01.T01:CDS 25.0%
!! AAGCAAAAAGAAGCTTTTAT+GGG - Chr3:401854-401873 MsG0380011496.01.T01:intron 25.0%
!! AATGTGATAATGACAAACTA+TGG + Chr3:401590-401609 None:intergenic 25.0%
!! ATGACTGTGTTTTATATGTT+TGG - Chr3:402277-402296 MsG0380011496.01.T01:intron 25.0%
!! CTAAAGCAAATTTTATGATG+AGG + Chr3:405355-405374 None:intergenic 25.0%
!! CTTTACATGATGATTTTGAA+AGG - Chr3:403183-403202 MsG0380011496.01.T01:intron 25.0%
!! GTTGATAGGATAAACAAAAT+TGG + Chr3:405899-405918 None:intergenic 25.0%
!! TAAGCAAAAAGAAGCTTTTA+TGG - Chr3:401853-401872 MsG0380011496.01.T01:intron 25.0%
!! TAGTAAAAGGTGCATTAAAT+AGG - Chr3:402352-402371 MsG0380011496.01.T01:intron 25.0%
!!! CTCATTTTGATAATTTTACC+GGG + Chr3:405244-405263 None:intergenic 25.0%
!!! GTCAAAATTATTTCTACACT+TGG + Chr3:403298-403317 None:intergenic 25.0%
!!! TGATTTCTGGTGTTATAATT+AGG + Chr3:403738-403757 None:intergenic 25.0%
AAAGAATTTCCTGAAACATG+CGG + Chr3:404305-404324 None:intergenic 30.0%
AAATATTGGGAAAAGCGATA+AGG - Chr3:403126-403145 MsG0380011496.01.T01:CDS 30.0%
AAATTCAGATTCCAAGCTTA+AGG - Chr3:401992-402011 MsG0380011496.01.T01:intron 30.0%
AAATTTGTGATTGCTGGATT+AGG - Chr3:404117-404136 MsG0380011496.01.T01:intron 30.0%
AACACATAACGGTTTCTATT+AGG + Chr3:405808-405827 None:intergenic 30.0%
AATCTCAACAATAATCTACC+TGG - Chr3:404252-404271 MsG0380011496.01.T01:CDS 30.0%
AATTTGTGATTGCTGGATTA+GGG - Chr3:404118-404137 MsG0380011496.01.T01:intron 30.0%
ACAAATGAAATCATTATGGC+CGG - Chr3:404874-404893 MsG0380011496.01.T01:intron 30.0%
ACACATAACGGTTTCTATTA+GGG + Chr3:405807-405826 None:intergenic 30.0%
ACTGTCAATGAATATGAATC+TGG + Chr3:404280-404299 None:intergenic 30.0%
AGAAGCAGTTAACATTCTTA+TGG - Chr3:405849-405868 MsG0380011496.01.T01:CDS 30.0%
ATGATGCATAATTCATAGCA+GGG + Chr3:402879-402898 None:intergenic 30.0%
ATTAGTACTTCAATCATGCA+TGG + Chr3:401613-401632 None:intergenic 30.0%
GAAGCAGTTAACATTCTTAT+GGG - Chr3:405850-405869 MsG0380011496.01.T01:CDS 30.0%
GATCTTTAAACATGTTGGAT+CGG - Chr3:405374-405393 MsG0380011496.01.T01:intron 30.0%
GATTTACTGATGTGAATAGA+GGG - Chr3:405722-405741 MsG0380011496.01.T01:CDS 30.0%
GCATTAAATAGGACATTGTA+GGG - Chr3:402363-402382 MsG0380011496.01.T01:intron 30.0%
GTCACCACTGAATAATTAAT+TGG - Chr3:403538-403557 MsG0380011496.01.T01:CDS 30.0%
TAATTCTGCCTAGTCAAATT+AGG - Chr3:402399-402418 MsG0380011496.01.T01:intron 30.0%
TAGTTGTTTACCCTATTGAT+TGG + Chr3:402155-402174 None:intergenic 30.0%
TATGATGCATAATTCATAGC+AGG + Chr3:402880-402899 None:intergenic 30.0%
TCTCAAATTATTAGCAGTGT+TGG - Chr3:403976-403995 MsG0380011496.01.T01:intron 30.0%
TGCATATTCTTTGTTGGAAT+GGG - Chr3:403681-403700 MsG0380011496.01.T01:intron 30.0%
TGCATTAAATAGGACATTGT+AGG - Chr3:402362-402381 MsG0380011496.01.T01:intron 30.0%
TGGATTCATCAATGTAAAAG+CGG + Chr3:403440-403459 None:intergenic 30.0%
TTGTGTGTGTGAGTTTATAA+TGG - Chr3:404804-404823 MsG0380011496.01.T01:intron 30.0%
TTTGACAAGAATGTAGTTCT+AGG + Chr3:403852-403871 None:intergenic 30.0%
! AAATGTGTAAGCTTTTCATC+AGG - Chr3:402606-402625 MsG0380011496.01.T01:intron 30.0%
! AAGAGATTTGTCTAACCTTT+TGG + Chr3:402316-402335 None:intergenic 30.0%
! ACCTTTTTGTGCATTTCAAA+TGG - Chr3:401648-401667 MsG0380011496.01.T01:intron 30.0%
! AGGTCAAAGGTTAATTTTCA+AGG - Chr3:404036-404055 MsG0380011496.01.T01:intron 30.0%
! AGTTAAGTTTGTTTGTGTGT+AGG - Chr3:405700-405719 MsG0380011496.01.T01:intron 30.0%
! ATAGAAACCGTTATGTGTTT+TGG - Chr3:405809-405828 MsG0380011496.01.T01:CDS 30.0%
! CTGTGTTTTATATGTTTGGT+TGG - Chr3:402281-402300 MsG0380011496.01.T01:intron 30.0%
! CTTTTCAATGCAAGATCATA+TGG - Chr3:404321-404340 MsG0380011496.01.T01:intron 30.0%
! GGTCAAAGGTTAATTTTCAA+GGG - Chr3:404037-404056 MsG0380011496.01.T01:intron 30.0%
! TAATTGGTTATCTTTTGAGC+AGG - Chr3:403554-403573 MsG0380011496.01.T01:CDS 30.0%
! TACACTATTGTTGATGAGAT+AGG - Chr3:401533-401552 MsG0380011496.01.T01:intron 30.0%
! TAGAAACCGTTATGTGTTTT+GGG - Chr3:405810-405829 MsG0380011496.01.T01:CDS 30.0%
! TCCATTTGAAATGCACAAAA+AGG + Chr3:401652-401671 None:intergenic 30.0%
! TGGAGTATCTCAAATATTCT+TGG - Chr3:401331-401350 MsG0380011496.01.T01:CDS 30.0%
!! AATATTCTTGGTGCTTATCA+TGG - Chr3:401343-401362 MsG0380011496.01.T01:CDS 30.0%
!! CACTCTTTAAGACCTTTAAA+TGG - Chr3:402710-402729 MsG0380011496.01.T01:intron 30.0%
!! TGGTGTTATAATTAGGCATA+AGG + Chr3:403731-403750 None:intergenic 30.0%
!!! AAAGTGTCTTTTGAGTTTTG+AGG - Chr3:402089-402108 MsG0380011496.01.T01:intron 30.0%
AACACCAGAAATCAGTACAA+TGG - Chr3:403744-403763 MsG0380011496.01.T01:intron 35.0%
AACATTAGACCCGGTAAAAT+TGG - Chr3:405232-405251 MsG0380011496.01.T01:intron 35.0%
AACCTTTGACCTATGAAACA+CGG + Chr3:404028-404047 None:intergenic 35.0%
AAGAATTTCCTGAAACATGC+GGG + Chr3:404304-404323 None:intergenic 35.0%
AATGTTTGAACCTATGTCAG+AGG + Chr3:405172-405191 None:intergenic 35.0%
ACCCTTCAATGAAAATGTGA+AGG - Chr3:404218-404237 MsG0380011496.01.T01:CDS 35.0%
AGAATGTTAACTGCTTCTGT+TGG + Chr3:405847-405866 None:intergenic 35.0%
AGACAAAAAGTCCTTAAGCT+TGG + Chr3:402006-402025 None:intergenic 35.0%
ATAGGTTCAAACATTAGACC+CGG - Chr3:405177-405196 MsG0380011496.01.T01:intron 35.0%
ATATTGTCTCAAAGTACGAG+TGG - Chr3:404162-404181 MsG0380011496.01.T01:intron 35.0%
ATGCAACCGAATGTTCTATT+AGG + Chr3:403233-403252 None:intergenic 35.0%
ATGCATCCCAAAACACATAA+CGG + Chr3:405819-405838 None:intergenic 35.0%
ATGTTTGAACCTATGTCAGA+GGG + Chr3:405171-405190 None:intergenic 35.0%
ATTGTTGAGATTGCTCAACA+TGG + Chr3:404244-404263 None:intergenic 35.0%
CAAATGAAATCATTATGGCC+GGG - Chr3:404875-404894 MsG0380011496.01.T01:intron 35.0%
CAGTTAACATTCTTATGGGA+AGG - Chr3:405854-405873 MsG0380011496.01.T01:CDS 35.0%
CATAATATATGCAAGGTCTG+GGG - Chr3:405031-405050 MsG0380011496.01.T01:intron 35.0%
CCATTGAAGTCAATACCATA+TGG + Chr3:401485-401504 None:intergenic 35.0%
CCATTGTATGCAGGAATTAA+GGG + Chr3:402961-402980 None:intergenic 35.0%
CGGATTGAACAATACATTCA+AGG + Chr3:403420-403439 None:intergenic 35.0%
GAAGATTAAGACACATGACT+TGG + Chr3:405531-405550 None:intergenic 35.0%
GACAGTGCATAATATATGCA+AGG - Chr3:405024-405043 MsG0380011496.01.T01:intron 35.0%
GCATAATATATGCAAGGTCT+GGG - Chr3:405030-405049 MsG0380011496.01.T01:intron 35.0%
GGATTTACTGATGTGAATAG+AGG - Chr3:405721-405740 MsG0380011496.01.T01:CDS 35.0%
GGTGACTCACTTATTGATAA+TGG - Chr3:401416-401435 MsG0380011496.01.T01:CDS 35.0%
GTGCATATTCTTTGTTGGAA+TGG - Chr3:403680-403699 MsG0380011496.01.T01:intron 35.0%
TAACATTCTTATGGGAAGGA+TGG - Chr3:405858-405877 MsG0380011496.01.T01:CDS 35.0%
TACAAGGCTACCAATCAATA+GGG - Chr3:402142-402161 MsG0380011496.01.T01:intron 35.0%
TAGGCATAAGGTAGTTGTTT+AGG + Chr3:403719-403738 None:intergenic 35.0%
TATAAACTCACACACACAAG+TGG + Chr3:404803-404822 None:intergenic 35.0%
TCAAGGTGCATATTCTTTGT+TGG - Chr3:403675-403694 MsG0380011496.01.T01:intron 35.0%
TCATAGAGGCTTTACAATCT+TGG - Chr3:404087-404106 MsG0380011496.01.T01:intron 35.0%
TCCATTGTATGCAGGAATTA+AGG + Chr3:402962-402981 None:intergenic 35.0%
TGAGTCACCAAATATGAACA+TGG + Chr3:401405-401424 None:intergenic 35.0%
TGCAACCGAATGTTCTATTA+GGG + Chr3:403232-403251 None:intergenic 35.0%
TGCAACTCATTAAACTTCCA+CGG - Chr3:404523-404542 MsG0380011496.01.T01:intron 35.0%
TGCAGTTCAAATATGCAATG+TGG + Chr3:405570-405589 None:intergenic 35.0%
TGCATAATATATGCAAGGTC+TGG - Chr3:405029-405048 MsG0380011496.01.T01:intron 35.0%
TGTCACAAAGATACTCGTTT+GGG - Chr3:402828-402847 MsG0380011496.01.T01:intron 35.0%
TTCAGTGTAATCACATGTGT+CGG + Chr3:403945-403964 None:intergenic 35.0%
TTCTAACTTGAAGCAGGAAT+TGG - Chr3:403365-403384 MsG0380011496.01.T01:intron 35.0%
TTGTAGTTAATTACCTACCG+TGG + Chr3:404543-404562 None:intergenic 35.0%
TTTGTCCTATTCCAACTACA+AGG - Chr3:402126-402145 MsG0380011496.01.T01:intron 35.0%
! AAAATCTTACAGTGAGTTGG+TGG + Chr3:403806-403825 None:intergenic 35.0%
! AATCGATTCTAACTTGAAGC+AGG - Chr3:403359-403378 MsG0380011496.01.T01:intron 35.0%
! AGCTTAAGGACTTTTTGTCT+TGG - Chr3:402006-402025 MsG0380011496.01.T01:intron 35.0%
! ATGAATATGAATCTGGAACC+AGG + Chr3:404273-404292 None:intergenic 35.0%
! CATGATGTGTTTTGTCATAG+AGG - Chr3:404073-404092 MsG0380011496.01.T01:intron 35.0%
! GCCTTCACATTTTCATTGAA+GGG + Chr3:404222-404241 None:intergenic 35.0%
! TAATTCATAGCAGGGTACTT+TGG + Chr3:402871-402890 None:intergenic 35.0%
!! CCATATGGTATTGACTTCAA+TGG - Chr3:401482-401501 MsG0380011496.01.T01:CDS 35.0%
!! GTACTTTGAGACAATATGCT+TGG + Chr3:404159-404178 None:intergenic 35.0%
!! GTTGATGACGTTTAAAACTG+TGG - Chr3:405475-405494 MsG0380011496.01.T01:intron 35.0%
!! TATGGTATTGACTTCAATGG+TGG - Chr3:401485-401504 MsG0380011496.01.T01:CDS 35.0%
!! TTGTCCATTGTACTGATTTC+TGG + Chr3:403751-403770 None:intergenic 35.0%
!!! TTTTTTTTTGGTGGTGTCCA+GGG + Chr3:405063-405082 None:intergenic 35.0%
!!! TTTTTTTTTTGGTGGTGTCC+AGG + Chr3:405064-405083 None:intergenic 35.0%
AAATGCCGAAATTGTTAGGC+CGG - Chr3:404745-404764 MsG0380011496.01.T01:intron 40.0%
ACAACAGTATGCTGATCTCT+TGG - Chr3:403767-403786 MsG0380011496.01.T01:intron 40.0%
ACACTTGGCAAGTGACAAAA+TGG + Chr3:403283-403302 None:intergenic 40.0%
ACATTGTAGGGTCTGTAGTT+TGG - Chr3:402375-402394 MsG0380011496.01.T01:intron 40.0%
ACTCATTAAACTTCCACGGT+AGG - Chr3:404527-404546 MsG0380011496.01.T01:intron 40.0%
AGTTTCTTCCTGTGTCATCA+AGG + Chr3:403041-403060 None:intergenic 40.0%
ATATGGCCACACAACTATCA+AGG - Chr3:403658-403677 MsG0380011496.01.T01:CDS 40.0%
ATCCGTGTTTCATAGGTCAA+AGG - Chr3:404023-404042 MsG0380011496.01.T01:intron 40.0%
ATGAAACACGGATACGAACA+TGG + Chr3:404016-404035 None:intergenic 40.0%
ATTAATGCAGCTGAACTGCT+TGG - Chr3:402931-402950 MsG0380011496.01.T01:CDS 40.0%
ATTGGGAAAAGCGATAAGGT+TGG - Chr3:403130-403149 MsG0380011496.01.T01:CDS 40.0%
CATTGTAGGGTCTGTAGTTT+GGG - Chr3:402376-402395 MsG0380011496.01.T01:intron 40.0%
CCCTTAATTCCTGCATACAA+TGG - Chr3:402958-402977 MsG0380011496.01.T01:CDS 40.0%
CTACAAGGCTACCAATCAAT+AGG - Chr3:402141-402160 MsG0380011496.01.T01:intron 40.0%
GCAAATCAAGCTAAGACTCT+AGG - Chr3:404902-404921 MsG0380011496.01.T01:intron 40.0%
GCAAGGAAATTTGTGATTGC+TGG - Chr3:404111-404130 MsG0380011496.01.T01:intron 40.0%
GCAAGTTGCTGAATGTTGAT+AGG + Chr3:405913-405932 None:intergenic 40.0%
GGCAAAATGCCGAAATTGTT+AGG - Chr3:404741-404760 MsG0380011496.01.T01:intron 40.0%
GTCAAAGACTGTATGAAGCA+CGG - Chr3:403866-403885 MsG0380011496.01.T01:intron 40.0%
GTGTCACAAAGATACTCGTT+TGG - Chr3:402827-402846 MsG0380011496.01.T01:intron 40.0%
GTTCCTGCCATGTTCATATT+TGG - Chr3:401395-401414 MsG0380011496.01.T01:CDS 40.0%
TAACGGTTTCTATTAGGGCA+TGG + Chr3:405802-405821 None:intergenic 40.0%
TACCAACTGAGTTAAGCTCA+CGG + Chr3:405002-405021 None:intergenic 40.0%
TCACCAAATATGAACATGGC+AGG + Chr3:401401-401420 None:intergenic 40.0%
TGTTCGTATCCGTGTTTCAT+AGG - Chr3:404016-404035 MsG0380011496.01.T01:intron 40.0%
TGTTTGAACCTATGTCAGAG+GGG + Chr3:405170-405189 None:intergenic 40.0%
TTCTATTAGGGCATGGAGTT+TGG + Chr3:405795-405814 None:intergenic 40.0%
TTGAGGTGATTAAAGATGCG+AGG + Chr3:405119-405138 None:intergenic 40.0%
! ATGGGAAGGATGGCTTTTAA+TGG - Chr3:405868-405887 MsG0380011496.01.T01:CDS 40.0%
! ATTGCTGGATTAGGGCTATT+GGG - Chr3:404126-404145 MsG0380011496.01.T01:intron 40.0%
! GGCCTTCACATTTTCATTGA+AGG + Chr3:404223-404242 None:intergenic 40.0%
! GGTTATCTTTTGAGCAGGTT+GGG - Chr3:403559-403578 MsG0380011496.01.T01:CDS 40.0%
! GTGCTTATCATGGTCTTAAG+TGG - Chr3:401353-401372 MsG0380011496.01.T01:CDS 40.0%
! TATGCACCTTGATAGTTGTG+TGG + Chr3:403667-403686 None:intergenic 40.0%
! TGAACATGGCAGGAACATTT+TGG + Chr3:401391-401410 None:intergenic 40.0%
! TGAGCTTAACTCAGTTGGTA+AGG - Chr3:405002-405021 MsG0380011496.01.T01:intron 40.0%
! TGGTTATCTTTTGAGCAGGT+TGG - Chr3:403558-403577 MsG0380011496.01.T01:CDS 40.0%
! TTTGACCTCTGTTTCTTCCA+AGG + Chr3:405756-405775 None:intergenic 40.0%
!! GAGTCTTAGCTTGATTTGCT+AGG + Chr3:404901-404920 None:intergenic 40.0%
!! TTGATTGGTAGCCTTGTAGT+TGG + Chr3:402140-402159 None:intergenic 40.0%
AAACTCACACACACAAGTGG+AGG + Chr3:404800-404819 None:intergenic 45.0%
ACAGGGGATCAAATGCTTCA+TGG - Chr3:402985-403004 MsG0380011496.01.T01:CDS 45.0%
ACCAACTGAGTTAAGCTCAC+GGG + Chr3:405001-405020 None:intergenic 45.0%
CAAGCTAAGACTCTAGGCTT+CGG - Chr3:404908-404927 MsG0380011496.01.T01:intron 45.0%
GATTAGGCGTGTTTCAGTGT+CGG - Chr3:403899-403918 MsG0380011496.01.T01:intron 45.0%
GGCTTTACAATCTTGGAGCA+AGG - Chr3:404094-404113 MsG0380011496.01.T01:intron 45.0%
TCTCAAATCCCCTCTGACAT+AGG - Chr3:405159-405178 MsG0380011496.01.T01:intron 45.0%
TTAGGGCATGGAGTTTGGAA+TGG + Chr3:405790-405809 None:intergenic 45.0%
! AGGGGATTTGAGATTCTACC+GGG + Chr3:405198-405217 None:intergenic 45.0%
! ATGAAGCATTTGATCCCCTG+TGG + Chr3:402986-403005 None:intergenic 45.0%
! GAGGGGATTTGAGATTCTAC+CGG + Chr3:405199-405218 None:intergenic 45.0%
! GATTGCTGGATTAGGGCTAT+TGG - Chr3:404125-404144 MsG0380011496.01.T01:intron 45.0%
! GTAATCACATGTGTCGGTGT+CGG + Chr3:403939-403958 None:intergenic 45.0%
!! GATGTGAATAGAGGGTGTTG+TGG - Chr3:405730-405749 MsG0380011496.01.T01:CDS 45.0%
!! GGTAGCCTTGTAGTTGGAAT+AGG + Chr3:402134-402153 None:intergenic 45.0%
!! TTAGCTTGATTTGCTAGGCC+CGG + Chr3:404896-404915 None:intergenic 45.0%
!!! AATATAAGTAATATTTTTTT+TGG + Chr3:404851-404870 None:intergenic 5.0%
AACTATGCTTCAGCTGCTGC+TGG - Chr3:403012-403031 MsG0380011496.01.T01:CDS 50.0%
ACTGAAACACGCCTAATCCG+AGG + Chr3:403897-403916 None:intergenic 50.0%
CACGGATACGAACATGGACA+CGG + Chr3:404010-404029 None:intergenic 50.0%
CCAACTGAGTTAAGCTCACG+GGG + Chr3:405000-405019 None:intergenic 50.0%
CCATTTGAGAAGCGACCAGT+CGG + Chr3:401512-401531 None:intergenic 50.0%
CTGCATACAATGGAGCCACA+GGG - Chr3:402968-402987 MsG0380011496.01.T01:CDS 50.0%
GGCATCCGGCCTAACAATTT+CGG + Chr3:404753-404772 None:intergenic 50.0%
GTCTTAAGTGGTGCAGTCAC+AGG - Chr3:401365-401384 MsG0380011496.01.T01:CDS 50.0%
TATGAAGCACGGTCACTCCT+CGG - Chr3:403877-403896 MsG0380011496.01.T01:intron 50.0%
TCCAGAAGTCCTAGCTCAAC+TGG - Chr3:404623-404642 MsG0380011496.01.T01:intron 50.0%
TGACAGTTCCCGCATGTTTC+AGG - Chr3:404293-404312 MsG0380011496.01.T01:CDS 50.0%
TGCATACAATGGAGCCACAG+GGG - Chr3:402969-402988 MsG0380011496.01.T01:CDS 50.0%
! ACACACACAAGTGGAGGTAC+CGG + Chr3:404794-404813 None:intergenic 50.0%
! GCTGGAATCCTTGATGACAC+AGG - Chr3:403030-403049 MsG0380011496.01.T01:CDS 50.0%
! GGCATTTTGCCAGTTGAGCT+AGG + Chr3:404635-404654 None:intergenic 50.0%
! GGTTGGTGCACATGACCAAA+AGG - Chr3:402298-402317 MsG0380011496.01.T01:intron 50.0%
! TGTGGCCTTGGAAGAAACAG+AGG - Chr3:405748-405767 MsG0380011496.01.T01:CDS 50.0%
!! AATAGAGGGTGTTGTGGCCT+TGG - Chr3:405736-405755 MsG0380011496.01.T01:CDS 50.0%
CCCCGTGAGCTTAACTCAGT+TGG - Chr3:404997-405016 MsG0380011496.01.T01:intron 55.0%
CCTGCATACAATGGAGCCAC+AGG - Chr3:402967-402986 MsG0380011496.01.T01:CDS 55.0%
CCTGTGGCTCCATTGTATGC+AGG + Chr3:402970-402989 None:intergenic 55.0%
GATGCGAGGCGAAAGATGTG+AGG + Chr3:405105-405124 None:intergenic 55.0%
GCCAGTTGAGCTAGGACTTC+TGG + Chr3:404627-404646 None:intergenic 55.0%
! CCGACTGGTCGCTTCTCAAA+TGG - Chr3:401509-401528 MsG0380011496.01.T01:CDS 55.0%
!! ACACACAAGTGGAGGTACCG+GGG + Chr3:404792-404811 None:intergenic 55.0%
!! CACACACAAGTGGAGGTACC+GGG + Chr3:404793-404812 None:intergenic 55.0%
!! GACTTCAATGGTGGACCGAC+TGG - Chr3:401494-401513 MsG0380011496.01.T01:CDS 55.0%
GCACGGTCACTCCTCGGATT+AGG - Chr3:403883-403902 MsG0380011496.01.T01:intron 60.0%
GTTAGGCCGGATGCCATGAC+CGG - Chr3:404758-404777 MsG0380011496.01.T01:intron 60.0%
TTAGGCCGGATGCCATGACC+GGG - Chr3:404759-404778 MsG0380011496.01.T01:intron 60.0%
! AAGGTCTGGGGTTCGAACCC+TGG - Chr3:405043-405062 MsG0380011496.01.T01:intron 60.0%
CATGACCGGGGTTCGAACCC+CGG - Chr3:404772-404791 MsG0380011496.01.T01:intron 65.0%
CGAACCCCGGTCATGGCATC+CGG + Chr3:404767-404786 None:intergenic 65.0%
TAGGCCGGATGCCATGACCG+GGG - Chr3:404760-404779 MsG0380011496.01.T01:intron 65.0%
!! AGGTACCGGGGTTCGAACCC+CGG + Chr3:404780-404799 None:intergenic 65.0%
CGGGGTTCGAACCCCGGTCA+TGG + Chr3:404774-404793 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr3 gene 401320 405942 401320 ID=MsG0380011496.01;Name=MsG0380011496.01
Chr3 mRNA 401320 405942 401320 ID=MsG0380011496.01.T01;Parent=MsG0380011496.01;Name=MsG0380011496.01.T01;_AED=0.50;_eAED=0.50;_QI=0|0|0|1|1|1|5|0|355
Chr3 exon 405708 405942 405708 ID=MsG0380011496.01.T01:exon:67;Parent=MsG0380011496.01.T01
Chr3 exon 404200 404321 404200 ID=MsG0380011496.01.T01:exon:68;Parent=MsG0380011496.01.T01
Chr3 exon 403447 403686 403447 ID=MsG0380011496.01.T01:exon:69;Parent=MsG0380011496.01.T01
Chr3 exon 402920 403169 402920 ID=MsG0380011496.01.T01:exon:70;Parent=MsG0380011496.01.T01
Chr3 exon 401320 401540 401320 ID=MsG0380011496.01.T01:exon:71;Parent=MsG0380011496.01.T01
Chr3 CDS 405708 405942 405708 ID=MsG0380011496.01.T01:cds;Parent=MsG0380011496.01.T01
Chr3 CDS 404200 404321 404200 ID=MsG0380011496.01.T01:cds;Parent=MsG0380011496.01.T01
Chr3 CDS 403447 403686 403447 ID=MsG0380011496.01.T01:cds;Parent=MsG0380011496.01.T01
Chr3 CDS 402920 403169 402920 ID=MsG0380011496.01.T01:cds;Parent=MsG0380011496.01.T01
Chr3 CDS 401320 401540 401320 ID=MsG0380011496.01.T01:cds;Parent=MsG0380011496.01.T01
Gene Sequence

>MsG0380011496.01.T01

ATGGCTAAGTTTGGAGTATCTCAAATATTCTTGGTGCTTATCATGGTCTTAAGTGGTGCAGTCACAGGCCAAAATGTTCCTGCCATGTTCATATTTGGTGACTCACTTATTGATAATGGTAACAATAACAACATGGCTTCATTAGCTAAAGCTAACTATTTTCCATATGGTATTGACTTCAATGGTGGACCGACTGGTCGCTTCTCAAATGGTTACACTATTGTTGATGAGATAGCTGAACTGCTTGGACTTCCCTTAATTCCTGCATACAATGGAGCCACAGGGGATCAAATGCTTCATGGAGTAAACTATGCTTCAGCTGCTGCTGGAATCCTTGATGACACAGGAAGAAACTTTGTTGGGCGCATACCATTTGATGAACAACTTAGAAACTTTGAGAATACATTGAATCAACTTACTGGAAATATTGGAGCAGATAATATGGCCACACAACTATCAAGGTGCATATTCTTTGTTGGAATGGGAAGCAATGACTACCTAAACAACTACCTTATGCCTAATTATAACACCAGAAATCAGTACAATGGACAACAGTATGCTGATCTCTTGGTTCAAACATATAACCACCAACTCACTAGGCTTTACAATCTTGGAGCAAGGAAATTTGTGATTGCTGGATTAGGGCTATTGGGATGTACTCCAAGCATATTGTCTCAAAGTACGAGTGGAAGCTGCTCTGAACAAGTGAACATGCTAGTGCAACCCTTCAATGAAAATGTGAAGGCCATGTTGAGCAATCTCAACAATAATCTACCTGGTTCCAGATTCATATTCATTGACAGTTCCCGCATGTTTCAGGAAATTCTTTTCAATGCAAGATCATATGGATTTACTGATGTGAATAGAGGGTGTTGTGGCCTTGGAAGAAACAGAGGTCAAATAACTTGTCTGCCATTCCAAACTCCATGCCCTAATAGAAACCGTTATGTGTTTTGGGATGCATTTCATCCAACAGAAGCAGTTAACATTCTTATGGGAAGGATGGCTTTTAATGGCAATACCAATTTTGTTTATCCTATCAACATTCAGCAACTTGCTCAACTATAA

Protein sequence

>MsG0380011496.01.T01

MAKFGVSQIFLVLIMVLSGAVTGQNVPAMFIFGDSLIDNGNNNNMASLAKANYFPYGIDFNGGPTGRFSNGYTIVDEIAELLGLPLIPAYNGATGDQMLHGVNYASAAAGILDDTGRNFVGRIPFDEQLRNFENTLNQLTGNIGADNMATQLSRCIFFVGMGSNDYLNNYLMPNYNTRNQYNGQQYADLLVQTYNHQLTRLYNLGARKFVIAGLGLLGCTPSILSQSTSGSCSEQVNMLVQPFNENVKAMLSNLNNNLPGSRFIFIDSSRMFQEILFNARSYGFTDVNRGCCGLGRNRGQITCLPFQTPCPNRNRYVFWDAFHPTEAVNILMGRMAFNGNTNFVYPINIQQLAQL*