AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380011501.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380011501.01.T01 MTR_3g005650 97.746 355 8 0 1 355 3 357 0.0 709
MsG0380011501.01.T01 MTR_8g087890 51.648 364 166 7 1 355 1 363 2.32e-128 372
MsG0380011501.01.T01 MTR_3g024510 51.989 352 164 4 9 355 19 370 2.57e-126 367
MsG0380011501.01.T01 MTR_0565s0010 52.408 353 162 5 9 355 13 365 3.66e-125 364
MsG0380011501.01.T01 MTR_3g005660 47.863 351 174 6 13 355 21 370 3.26e-111 329
MsG0380011501.01.T01 MTR_4g035353 45.429 361 187 4 5 355 3 363 1.50e-110 327
MsG0380011501.01.T01 MTR_3g098270 47.761 335 167 4 28 354 34 368 6.85e-106 316
MsG0380011501.01.T01 MTR_2g033930 41.504 359 201 6 4 354 5 362 4.37e-91 277
MsG0380011501.01.T01 MTR_2g033920 41.551 361 202 6 2 354 8 367 1.87e-90 276
MsG0380011501.01.T01 MTR_5g078210 43.114 334 184 5 9 338 7 338 3.57e-89 272
MsG0380011501.01.T01 MTR_2g017955 42.857 364 184 12 6 354 5 359 1.90e-88 271
MsG0380011501.01.T01 MTR_8g087870 41.341 358 195 8 3 355 4 351 3.26e-86 264
MsG0380011501.01.T01 MTR_3g023220 41.265 332 182 7 26 354 31 352 1.62e-84 260
MsG0380011501.01.T01 MTR_2g017925 41.274 361 189 9 6 354 5 354 3.53e-83 257
MsG0380011501.01.T01 MTR_4g122200 40.113 354 203 7 8 354 16 367 1.67e-82 255
MsG0380011501.01.T01 MTR_2g017875 42.012 338 180 9 26 355 32 361 1.70e-81 253
MsG0380011501.01.T01 MTR_8g079050 40.108 369 195 8 10 355 11 376 8.41e-81 251
MsG0380011501.01.T01 MTR_2g017965 40.503 358 194 11 9 354 10 360 2.01e-80 250
MsG0380011501.01.T01 MTR_2g017915 39.889 361 178 10 6 354 5 338 3.88e-77 241
MsG0380011501.01.T01 MTR_7g116520 37.110 353 216 6 9 355 14 366 4.34e-77 241
MsG0380011501.01.T01 MTR_5g093090 37.784 352 206 5 11 352 11 359 1.88e-75 237
MsG0380011501.01.T01 MTR_3g435540 39.157 332 196 5 8 333 2 333 3.93e-75 236
MsG0380011501.01.T01 MTR_3g021460 39.093 353 192 10 10 354 12 349 4.77e-75 236
MsG0380011501.01.T01 MTR_7g116570 35.977 353 218 6 9 355 16 366 1.18e-74 235
MsG0380011501.01.T01 MTR_3g052490 39.660 353 188 8 19 355 23 366 1.39e-74 235
MsG0380011501.01.T01 MTR_7g116510 37.126 334 204 5 28 355 25 358 4.47e-74 234
MsG0380011501.01.T01 MTR_1g079540 36.158 354 221 5 4 352 7 360 1.35e-73 233
MsG0380011501.01.T01 MTR_1g069175 37.853 354 208 7 6 352 16 364 1.74e-73 232
MsG0380011501.01.T01 MTR_5g009100 36.667 330 203 4 30 353 48 377 1.89e-73 233
MsG0380011501.01.T01 MTR_2g461580 36.565 361 203 8 6 354 3 349 2.36e-73 231
MsG0380011501.01.T01 MTR_4g108690 39.806 309 181 3 30 333 29 337 2.53e-73 232
MsG0380011501.01.T01 MTR_1g024890 35.821 335 210 5 23 352 27 361 2.25e-72 229
MsG0380011501.01.T01 MTR_3g052480 38.395 349 199 8 19 355 24 368 1.37e-71 227
MsG0380011501.01.T01 MTR_3g052580 33.791 364 229 5 1 355 1 361 1.31e-70 225
MsG0380011501.01.T01 MTR_7g116500 35.775 355 223 5 6 355 11 365 1.55e-70 224
MsG0380011501.01.T01 MTR_3g052580 33.702 362 228 5 3 355 2 360 1.27e-69 223
MsG0380011501.01.T01 MTR_5g078210 44.961 258 138 3 30 283 27 284 1.34e-69 221
MsG0380011501.01.T01 MTR_4g019880 35.593 354 221 6 6 352 10 363 2.61e-69 221
MsG0380011501.01.T01 MTR_6g021530 35.393 356 220 6 10 355 7 362 3.19e-69 221
MsG0380011501.01.T01 MTR_7g008060 35.475 358 207 7 8 355 9 352 8.52e-68 217
MsG0380011501.01.T01 MTR_1g079530 35.537 363 218 8 1 355 1 355 8.52e-66 212
MsG0380011501.01.T01 MTR_2g033920 41.869 289 160 5 2 283 8 295 2.03e-65 210
MsG0380011501.01.T01 MTR_1g025780 37.540 309 182 7 25 326 38 342 2.22e-64 209
MsG0380011501.01.T01 MTR_5g084750 34.604 341 206 10 4 333 6 340 8.12e-63 204
MsG0380011501.01.T01 MTR_4g056160 36.152 343 193 10 7 333 8 340 1.34e-62 204
MsG0380011501.01.T01 MTR_3g114090 36.246 309 188 7 27 328 35 341 2.80e-60 198
MsG0380011501.01.T01 MTR_3g464730 34.211 342 213 9 1 333 1 339 4.86e-60 197
MsG0380011501.01.T01 MTR_1g025720 37.013 308 186 6 27 328 36 341 1.69e-59 196
MsG0380011501.01.T01 MTR_2g044100 36.391 338 196 8 28 352 43 374 4.27e-59 196
MsG0380011501.01.T01 MTR_8g074570 34.897 341 207 6 24 353 34 370 7.51e-59 194
MsG0380011501.01.T01 MTR_1g025760 34.347 329 206 6 9 328 58 385 1.02e-58 195
MsG0380011501.01.T01 MTR_4g056280 35.849 318 194 8 26 335 28 343 1.13e-58 194
MsG0380011501.01.T01 MTR_5g084770 34.024 338 211 8 1 329 1 335 1.71e-58 193
MsG0380011501.01.T01 MTR_1g025700 36.254 331 196 8 9 328 28 354 8.27e-58 192
MsG0380011501.01.T01 MTR_3g114120 35.783 313 185 8 26 328 45 351 1.30e-57 191
MsG0380011501.01.T01 MTR_2g084585 35.650 331 203 8 11 333 12 340 3.79e-57 189
MsG0380011501.01.T01 MTR_0009s0250 32.267 344 210 9 4 337 6 336 2.20e-56 187
MsG0380011501.01.T01 MTR_8g022810 34.211 342 204 8 4 328 10 347 6.05e-56 187
MsG0380011501.01.T01 MTR_8g075230 35.938 320 187 10 24 331 32 345 9.13e-56 186
MsG0380011501.01.T01 MTR_8g014910 34.328 335 208 9 9 333 11 343 3.13e-55 184
MsG0380011501.01.T01 MTR_8g031420 32.295 353 220 5 12 354 19 362 2.22e-54 182
MsG0380011501.01.T01 MTR_3g082830 33.754 317 199 8 21 329 31 344 2.32e-54 182
MsG0380011501.01.T01 MTR_8g022790 34.535 333 205 5 28 355 37 361 5.92e-54 181
MsG0380011501.01.T01 MTR_1g025680 36.306 314 185 9 25 328 31 339 7.14e-54 184
MsG0380011501.01.T01 MTR_5g022630 34.756 328 195 10 24 338 39 360 1.07e-53 181
MsG0380011501.01.T01 MTR_8g074560 32.884 371 228 9 1 354 1 367 6.51e-53 179
MsG0380011501.01.T01 MTR_2g100620 34.494 316 197 7 26 333 29 342 3.26e-52 177
MsG0380011501.01.T01 MTR_5g084790 32.267 344 212 9 4 334 8 343 5.75e-52 176
MsG0380011501.01.T01 MTR_5g022640 33.125 320 197 9 24 331 39 353 6.93e-52 176
MsG0380011501.01.T01 MTR_2g015080 31.025 361 215 12 9 344 16 367 3.31e-50 172
MsG0380011501.01.T01 MTR_5g074270 31.546 317 204 8 28 334 33 346 5.86e-49 169
MsG0380011501.01.T01 MTR_8g031430 30.861 337 214 5 28 354 37 364 6.22e-48 166
MsG0380011501.01.T01 MTR_8g031390 31.737 334 208 6 28 351 37 360 1.15e-47 166
MsG0380011501.01.T01 MTR_2g018015 32.849 344 157 10 17 354 25 300 2.41e-47 162
MsG0380011501.01.T01 MTR_5g093090 35.789 285 170 5 11 285 11 292 2.60e-47 162
MsG0380011501.01.T01 MTR_0127s0040 35.021 237 148 6 123 355 4 238 2.14e-46 158
MsG0380011501.01.T01 MTR_2g017925 38.362 232 127 7 128 354 31 251 3.18e-46 159
MsG0380011501.01.T01 MTR_8g075200 32.198 323 203 10 24 335 37 354 5.44e-46 162
MsG0380011501.01.T01 MTR_8g074580 29.921 381 213 8 24 353 40 417 5.90e-46 162
MsG0380011501.01.T01 MTR_8g075220 31.231 333 216 8 24 344 36 367 2.80e-45 159
MsG0380011501.01.T01 MTR_8g031400 30.267 337 216 5 28 354 37 364 3.67e-45 159
MsG0380011501.01.T01 MTR_4g087985 30.060 336 215 10 8 326 14 346 3.03e-44 156
MsG0380011501.01.T01 MTR_8g022810 31.471 340 163 9 4 328 10 294 1.47e-43 153
MsG0380011501.01.T01 MTR_5g083040 30.745 322 205 8 19 326 23 340 1.78e-41 149
MsG0380011501.01.T01 MTR_1g025910 32.450 302 191 6 33 326 41 337 1.08e-40 147
MsG0380011501.01.T01 MTR_8g031390 32.384 281 175 5 28 303 37 307 3.54e-39 142
MsG0380011501.01.T01 MTR_5g087690 27.616 344 226 6 23 354 45 377 1.26e-36 136
MsG0380011501.01.T01 MTR_2g017895 30.208 288 171 9 74 355 4 267 5.39e-35 129
MsG0380011501.01.T01 MTR_1g030340 28.809 361 214 10 3 329 13 364 2.18e-32 125
MsG0380011501.01.T01 MTR_1g079590 37.222 180 109 3 23 198 26 205 1.07e-31 119
MsG0380011501.01.T01 MTR_5g093090 37.879 198 111 4 11 198 11 206 1.61e-31 118
MsG0380011501.01.T01 MTR_2g087292 27.746 346 162 10 4 341 6 271 4.61e-31 119
MsG0380011501.01.T01 MTR_7g116870 26.027 365 223 10 9 340 13 363 1.25e-29 117
MsG0380011501.01.T01 MTR_7g033150 24.931 361 229 7 28 355 35 386 1.46e-29 117
MsG0380011501.01.T01 MTR_1108s0010 29.864 221 140 4 128 345 3 211 5.89e-29 112
MsG0380011501.01.T01 MTR_7g087190 28.767 365 211 14 14 340 26 379 3.14e-28 114
MsG0380011501.01.T01 MTR_1g030275 28.954 373 223 13 1 339 4 368 3.57e-28 113
MsG0380011501.01.T01 MTR_1g030268 28.333 360 212 12 6 332 16 362 4.66e-28 113
MsG0380011501.01.T01 MTR_6g007100 27.108 332 210 9 27 340 32 349 5.44e-28 112
MsG0380011501.01.T01 MTR_8g028160 26.613 372 234 10 1 340 6 370 1.27e-27 112
MsG0380011501.01.T01 MTR_6g007090 27.147 361 223 11 9 340 17 366 1.37e-27 112
MsG0380011501.01.T01 MTR_1g030230 28.346 381 232 13 1 348 1 373 1.80e-27 111
MsG0380011501.01.T01 MTR_8g089805 27.322 366 227 11 6 339 16 374 5.51e-27 110
MsG0380011501.01.T01 MTR_3g463960 27.108 332 210 10 28 334 44 368 7.03e-27 110
MsG0380011501.01.T01 MTR_3g463950 27.108 332 210 10 28 334 44 368 7.03e-27 110
MsG0380011501.01.T01 MTR_3g463970 27.108 332 210 10 28 334 44 368 7.03e-27 110
MsG0380011501.01.T01 MTR_3g463940 27.108 332 210 10 28 334 44 368 7.03e-27 110
MsG0380011501.01.T01 MTR_6g007095 27.184 309 194 8 55 346 394 688 7.81e-27 112
MsG0380011501.01.T01 MTR_6g007095 27.035 344 206 9 27 340 40 368 2.98e-25 107
MsG0380011501.01.T01 MTR_2g015580 27.957 372 228 14 11 355 27 385 1.67e-26 109
MsG0380011501.01.T01 MTR_7g033155 25.490 357 214 7 28 340 38 386 2.37e-26 108
MsG0380011501.01.T01 MTR_8g038680 27.405 343 211 9 27 340 27 360 2.71e-26 108
MsG0380011501.01.T01 MTR_3g463930 26.531 343 205 11 28 334 44 375 5.26e-26 107
MsG0380011501.01.T01 MTR_1g030220 26.923 364 227 11 1 332 8 364 1.35e-25 106
MsG0380011501.01.T01 MTR_1g060490 27.928 333 202 13 29 345 38 348 4.31e-25 104
MsG0380011501.01.T01 MTR_3g069780 25.882 340 223 10 28 346 30 361 1.45e-24 103
MsG0380011501.01.T01 MTR_2g043980 26.531 343 209 11 9 328 13 335 1.91e-24 102
MsG0380011501.01.T01 MTR_3g438030 26.724 348 210 13 28 346 30 361 1.97e-24 102
MsG0380011501.01.T01 MTR_2g015590 28.045 353 227 10 9 339 13 360 2.17e-24 102
MsG0380011501.01.T01 MTR_1g092690 26.235 324 199 10 19 326 42 341 1.12e-23 100
MsG0380011501.01.T01 MTR_4g104240 24.302 358 234 9 10 340 16 363 1.80e-23 100
MsG0380011501.01.T01 MTR_2g079090 27.301 326 202 11 28 334 30 339 2.36e-23 99.8
MsG0380011501.01.T01 MTR_0029s0050 26.761 355 220 13 4 334 1 339 3.33e-23 99.4
MsG0380011501.01.T01 MTR_1g060500 25.472 318 202 9 28 327 40 340 6.57e-23 98.6
MsG0380011501.01.T01 MTR_0029s0100 26.761 355 220 13 4 334 1 339 1.10e-22 97.8
MsG0380011501.01.T01 MTR_7g033165 26.087 368 230 11 12 347 17 374 1.59e-22 97.8
MsG0380011501.01.T01 MTR_2g079080 26.994 326 203 10 28 334 30 339 1.74e-22 97.4
MsG0380011501.01.T01 MTR_3g011860 42.308 104 60 0 210 313 219 322 1.90e-22 96.7
MsG0380011501.01.T01 MTR_2g015630 27.221 349 215 13 33 355 36 371 7.35e-22 95.9
MsG0380011501.01.T01 MTR_1g030268 28.904 301 178 10 6 283 16 303 9.76e-22 94.7
MsG0380011501.01.T01 MTR_4g036375 37.748 151 89 4 26 172 28 177 1.24e-21 91.7
MsG0380011501.01.T01 MTR_7g111780 26.380 326 204 11 28 333 36 345 2.10e-21 94.4
MsG0380011501.01.T01 MTR_5g074210 29.747 158 103 3 185 334 45 202 1.28e-20 89.4
MsG0380011501.01.T01 MTR_3g448360 26.686 341 210 13 28 340 29 357 1.45e-20 92.0
MsG0380011501.01.T01 MTR_7g113860 26.377 345 217 8 25 340 26 362 7.13e-20 90.1
MsG0380011501.01.T01 MTR_7g104220 25.552 317 200 13 26 327 40 335 1.03e-19 89.4
MsG0380011501.01.T01 MTR_6g049220 52.747 91 39 3 26 112 28 118 2.96e-19 84.3
MsG0380011501.01.T01 MTR_7g113860 26.667 345 216 8 25 340 32 368 4.00e-19 88.2
MsG0380011501.01.T01 MTR_1g092750 25.776 322 205 10 19 326 31 332 6.68e-19 87.0
MsG0380011501.01.T01 MTR_1g092740 26.613 248 161 5 22 267 32 260 1.21e-18 86.3
MsG0380011501.01.T01 MTR_1g079570 27.407 135 97 1 219 352 4 138 9.74e-18 79.3
MsG0380011501.01.T01 MTR_3g069520 26.225 347 211 14 28 346 30 359 3.40e-17 82.4
MsG0380011501.01.T01 MTR_1g082390 24.011 354 225 10 8 329 11 352 4.15e-16 79.0
MsG0380011501.01.T01 MTR_1g092760 24.534 322 210 10 18 326 29 330 1.14e-15 77.4
MsG0380011501.01.T01 MTR_7g111780 25.483 259 160 9 94 333 2 246 1.77e-15 75.9
MsG0380011501.01.T01 MTR_2g015670 27.761 335 199 12 28 339 31 345 6.20e-15 75.5
MsG0380011501.01.T01 MTR_1g030265 25.085 295 176 9 79 339 53 336 9.29e-15 75.1
MsG0380011501.01.T01 MTR_2g015650 27.083 336 214 11 28 339 31 359 2.07e-14 73.9
MsG0380011501.01.T01 MTR_8g089805 23.958 288 185 9 82 339 23 306 9.51e-14 71.6
MsG0380011501.01.T01 MTR_4g056220 29.204 113 79 1 234 345 77 189 3.19e-13 68.2
MsG0380011501.01.T01 MTR_4g036385 32.432 111 73 2 227 335 17 127 7.61e-13 65.5
MsG0380011501.01.T01 MTR_7g033165 25.540 278 175 9 12 267 17 284 2.73e-12 67.0
MsG0380011501.01.T01 MTR_7g113860 24.828 290 183 7 80 340 11 294 9.12e-12 65.5
MsG0380011501.01.T01 MTR_6g049230 28.125 128 89 2 194 318 67 194 1.03e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380011501.01.T01 AT1G71691 69.789 331 99 1 26 355 53 383 1.61e-175 493
MsG0380011501.01.T01 AT1G71691 66.667 279 92 1 78 355 4 282 9.39e-142 403
MsG0380011501.01.T01 AT1G71691 70.270 259 76 1 26 283 53 311 9.13e-130 374
MsG0380011501.01.T01 AT1G29670 50.556 360 172 6 1 355 5 363 2.01e-124 362
MsG0380011501.01.T01 AT1G29670 50.556 360 172 6 1 355 73 431 7.61e-124 363
MsG0380011501.01.T01 AT5G45670 51.821 357 159 6 12 355 6 362 4.49e-120 351
MsG0380011501.01.T01 AT1G29660 50.852 352 165 7 11 355 14 364 5.44e-119 348
MsG0380011501.01.T01 AT4G18970 50.893 336 159 5 26 355 26 361 2.87e-115 339
MsG0380011501.01.T01 AT4G18970 50.893 336 159 5 26 355 26 361 4.47e-114 338
MsG0380011501.01.T01 AT1G33811 48.824 340 163 6 26 355 32 370 8.04e-114 335
MsG0380011501.01.T01 AT1G71250 48.094 341 171 4 21 355 33 373 1.92e-110 327
MsG0380011501.01.T01 AT5G08460 47.207 358 177 7 10 355 28 385 2.49e-109 325
MsG0380011501.01.T01 AT5G15720 49.112 338 163 5 26 355 28 364 4.47e-109 323
MsG0380011501.01.T01 AT2G19060 41.369 336 170 9 15 339 17 336 1.69e-83 257
MsG0380011501.01.T01 AT5G15720 45.455 286 148 4 78 355 48 333 9.12e-83 255
MsG0380011501.01.T01 AT2G19010 40.057 352 190 9 10 354 10 347 1.49e-82 255
MsG0380011501.01.T01 AT2G19010 40.057 352 190 9 10 354 40 377 7.47e-82 254
MsG0380011501.01.T01 AT2G19050 37.741 363 192 10 9 355 5 349 7.05e-79 246
MsG0380011501.01.T01 AT4G10950 37.237 333 203 4 26 352 69 401 1.52e-78 246
MsG0380011501.01.T01 AT5G37690 40.299 335 191 5 11 337 6 339 1.76e-77 242
MsG0380011501.01.T01 AT5G15720 48.872 266 127 5 26 283 28 292 5.80e-77 239
MsG0380011501.01.T01 AT2G23540 37.027 370 208 8 9 355 20 387 1.71e-76 241
MsG0380011501.01.T01 AT4G10950 36.937 333 200 5 26 352 69 397 1.24e-75 239
MsG0380011501.01.T01 AT4G30140 42.216 334 174 9 23 352 28 346 3.81e-75 236
MsG0380011501.01.T01 AT5G33370 35.014 357 225 5 1 352 5 359 1.68e-74 235
MsG0380011501.01.T01 AT1G74460 39.053 338 193 6 11 337 7 342 3.97e-74 234
MsG0380011501.01.T01 AT3G50400 36.631 374 210 9 7 355 3 374 1.10e-73 233
MsG0380011501.01.T01 AT5G37690 39.466 337 183 7 11 337 6 331 1.13e-72 229
MsG0380011501.01.T01 AT5G41890 38.968 349 184 9 30 355 33 375 3.76e-72 229
MsG0380011501.01.T01 AT3G04290 36.391 327 203 4 28 349 29 355 2.02e-70 224
MsG0380011501.01.T01 AT4G28780 36.637 333 206 4 28 355 31 363 3.13e-70 224
MsG0380011501.01.T01 AT5G18430 37.069 348 209 6 9 349 12 356 6.55e-70 223
MsG0380011501.01.T01 AT2G19050 41.264 269 142 6 9 267 5 267 3.24e-65 208
MsG0380011501.01.T01 AT5G55050 35.632 348 206 9 20 352 29 373 1.47e-62 204
MsG0380011501.01.T01 AT2G04570 34.493 345 209 11 6 338 4 343 1.20e-59 196
MsG0380011501.01.T01 AT3G53100 37.609 343 200 9 1 333 1 339 7.23e-58 191
MsG0380011501.01.T01 AT1G75890 35.185 324 198 9 24 338 43 363 1.19e-57 191
MsG0380011501.01.T01 AT1G75890 35.185 324 198 9 24 338 72 392 1.96e-57 191
MsG0380011501.01.T01 AT2G03980 34.969 326 195 8 23 338 38 356 1.05e-56 189
MsG0380011501.01.T01 AT2G03980 34.969 326 195 8 23 338 38 356 1.05e-56 189
MsG0380011501.01.T01 AT2G03980 34.969 326 195 8 23 338 38 356 1.05e-56 189
MsG0380011501.01.T01 AT2G03980 34.969 326 195 8 23 338 38 356 1.05e-56 189
MsG0380011501.01.T01 AT1G75880 35.625 320 195 8 25 335 49 366 1.91e-56 188
MsG0380011501.01.T01 AT5G22810 35.849 318 192 8 26 333 32 347 2.26e-56 188
MsG0380011501.01.T01 AT5G45950 33.436 326 210 6 14 336 26 347 6.35e-56 186
MsG0380011501.01.T01 AT2G42990 32.676 355 224 9 1 345 1 350 1.05e-55 186
MsG0380011501.01.T01 AT5G63170 38.066 331 179 12 6 326 5 319 1.55e-55 185
MsG0380011501.01.T01 AT1G75890 33.929 336 199 9 24 338 43 376 1.77e-55 186
MsG0380011501.01.T01 AT5G42170 34.347 329 199 9 26 344 48 369 2.90e-55 185
MsG0380011501.01.T01 AT4G26790 33.742 326 193 9 22 333 23 339 3.26e-55 184
MsG0380011501.01.T01 AT4G26790 33.742 326 193 9 22 333 23 339 3.26e-55 184
MsG0380011501.01.T01 AT1G75880 35.312 320 195 9 25 335 49 365 8.84e-55 184
MsG0380011501.01.T01 AT5G03810 35.503 338 200 9 8 329 2 337 2.88e-54 182
MsG0380011501.01.T01 AT5G03820 35.103 339 201 8 8 329 5 341 3.37e-54 182
MsG0380011501.01.T01 AT4G16230 46.429 224 108 5 9 221 5 227 6.89e-54 178
MsG0380011501.01.T01 AT5G03820 35.103 339 201 8 8 329 33 369 8.42e-54 182
MsG0380011501.01.T01 AT1G73610 35.922 309 178 9 24 326 31 325 1.15e-52 177
MsG0380011501.01.T01 AT5G33370 35.870 276 172 4 13 283 15 290 1.24e-52 177
MsG0380011501.01.T01 AT1G75900 30.484 351 222 9 8 342 17 361 1.19e-51 176
MsG0380011501.01.T01 AT3G14225 33.333 345 215 6 25 355 34 377 1.97e-51 175
MsG0380011501.01.T01 AT1G20120 32.609 322 203 9 27 338 77 394 3.83e-51 175
MsG0380011501.01.T01 AT3G14225 33.046 348 208 7 25 355 34 373 4.16e-51 174
MsG0380011501.01.T01 AT1G23500 35.714 336 186 11 1 326 11 326 5.44e-51 173
MsG0380011501.01.T01 AT1G20132 33.746 323 203 8 24 338 57 376 5.99e-51 174
MsG0380011501.01.T01 AT1G53920 31.367 373 227 9 7 355 17 384 1.48e-49 171
MsG0380011501.01.T01 AT1G59406 33.234 337 204 11 3 326 2 330 2.25e-49 169
MsG0380011501.01.T01 AT1G59030 33.234 337 204 11 3 326 2 330 2.25e-49 169
MsG0380011501.01.T01 AT1G58725 33.234 337 204 11 3 326 2 330 2.25e-49 169
MsG0380011501.01.T01 AT1G53940 34.104 346 207 8 25 355 36 375 2.38e-49 170
MsG0380011501.01.T01 AT5G40990 33.913 345 209 7 25 355 34 373 2.60e-49 170
MsG0380011501.01.T01 AT3G14820 33.125 320 198 10 25 335 29 341 4.51e-49 169
MsG0380011501.01.T01 AT2G30310 32.317 328 209 9 10 327 16 340 1.30e-48 167
MsG0380011501.01.T01 AT1G71120 32.659 346 209 9 20 353 23 356 2.66e-48 167
MsG0380011501.01.T01 AT2G30220 32.081 346 219 10 1 333 3 345 2.18e-47 164
MsG0380011501.01.T01 AT3G16370 33.750 320 200 9 23 333 25 341 2.57e-47 164
MsG0380011501.01.T01 AT1G06990 32.000 325 206 8 21 333 27 348 1.10e-46 162
MsG0380011501.01.T01 AT2G31540 32.416 327 210 8 18 335 25 349 1.31e-46 162
MsG0380011501.01.T01 AT5G45960 30.745 322 210 8 24 334 43 362 2.68e-46 162
MsG0380011501.01.T01 AT1G58430 32.710 321 203 9 18 328 25 342 5.68e-46 160
MsG0380011501.01.T01 AT1G20135 31.804 327 202 9 8 326 7 320 9.52e-46 159
MsG0380011501.01.T01 AT1G75920 31.138 334 206 10 3 326 5 324 1.67e-45 159
MsG0380011501.01.T01 AT2G40250 28.923 325 216 6 26 338 34 355 1.83e-44 157
MsG0380011501.01.T01 AT2G24560 30.696 316 208 8 27 333 33 346 4.84e-43 153
MsG0380011501.01.T01 AT1G20130 31.132 318 201 8 24 326 180 494 7.52e-43 155
MsG0380011501.01.T01 AT1G20130 31.132 318 201 8 24 326 200 514 9.30e-43 155
MsG0380011501.01.T01 AT1G58520 31.833 311 187 10 26 326 28 323 6.39e-42 149
MsG0380011501.01.T01 AT1G58525 31.833 311 187 10 26 326 28 323 6.39e-42 149
MsG0380011501.01.T01 AT1G75920 30.422 332 193 10 20 326 16 334 1.81e-41 149
MsG0380011501.01.T01 AT1G53990 30.811 370 220 11 9 355 8 364 6.53e-41 147
MsG0380011501.01.T01 AT3G43570 31.024 332 189 11 3 326 2 301 8.17e-41 146
MsG0380011501.01.T01 AT1G75930 30.149 335 208 13 3 326 5 324 6.84e-39 141
MsG0380011501.01.T01 AT1G75910 29.819 332 211 9 7 326 3 324 2.11e-38 140
MsG0380011501.01.T01 AT2G04020 38.158 228 128 6 6 227 21 241 9.88e-38 136
MsG0380011501.01.T01 AT2G04020 38.158 228 128 6 6 227 21 241 3.14e-37 136
MsG0380011501.01.T01 AT3G43550 32.646 291 180 9 3 283 2 286 9.36e-36 132
MsG0380011501.01.T01 AT1G75920 28.097 331 189 9 3 326 5 293 1.62e-35 132
MsG0380011501.01.T01 AT1G53940 34.701 268 160 7 25 283 36 297 4.95e-35 130
MsG0380011501.01.T01 AT1G54010 28.804 368 231 13 1 352 2 354 1.73e-34 130
MsG0380011501.01.T01 AT1G75920 29.831 295 184 9 42 326 15 296 3.30e-34 128
MsG0380011501.01.T01 AT1G54020 27.654 358 230 13 4 352 9 346 7.19e-34 129
MsG0380011501.01.T01 AT1G54000 27.500 360 234 11 6 352 9 354 1.35e-33 128
MsG0380011501.01.T01 AT1G54030 27.795 331 215 11 29 355 53 363 2.17e-33 128
MsG0380011501.01.T01 AT2G27360 28.286 350 224 9 13 339 18 363 1.39e-31 123
MsG0380011501.01.T01 AT1G28570 28.448 348 203 13 24 339 30 363 1.82e-31 122
MsG0380011501.01.T01 AT4G16233 44.444 126 69 1 231 355 5 130 1.93e-31 115
MsG0380011501.01.T01 AT1G31550 27.978 361 221 10 1 333 9 358 2.86e-31 122
MsG0380011501.01.T01 AT3G14220 29.674 337 209 14 27 352 31 350 4.33e-31 121
MsG0380011501.01.T01 AT1G31550 27.901 362 217 10 1 333 9 355 3.32e-30 119
MsG0380011501.01.T01 AT1G28640 28.756 386 195 17 6 340 9 365 4.14e-30 119
MsG0380011501.01.T01 AT1G28650 27.913 369 227 10 1 339 7 366 6.27e-30 118
MsG0380011501.01.T01 AT1G28660 27.548 363 227 9 6 339 9 364 1.92e-29 117
MsG0380011501.01.T01 AT1G28580 27.855 359 223 12 9 339 16 366 3.06e-29 116
MsG0380011501.01.T01 AT1G28670 28.022 364 225 10 6 339 9 365 6.52e-29 115
MsG0380011501.01.T01 AT1G67830 28.235 340 203 12 25 332 27 357 7.39e-28 112
MsG0380011501.01.T01 AT1G28660 27.548 363 226 10 6 339 9 363 8.35e-28 112
MsG0380011501.01.T01 AT1G28600 26.287 369 232 11 1 339 1 359 8.68e-28 112
MsG0380011501.01.T01 AT2G24560 29.259 270 180 8 27 287 33 300 1.20e-27 110
MsG0380011501.01.T01 AT3G48460 25.474 369 216 13 12 340 15 364 6.65e-27 110
MsG0380011501.01.T01 AT3G27950 25.984 381 244 10 4 355 1 372 5.33e-26 107
MsG0380011501.01.T01 AT3G14210 26.781 351 215 14 22 352 28 356 6.41e-26 107
MsG0380011501.01.T01 AT1G28610 26.453 344 214 12 12 327 15 347 7.35e-26 107
MsG0380011501.01.T01 AT2G31550 28.641 206 142 3 132 333 2 206 7.44e-26 103
MsG0380011501.01.T01 AT4G01130 24.457 368 235 9 10 343 13 371 1.53e-25 106
MsG0380011501.01.T01 AT5G14450 26.933 375 228 11 2 339 8 373 2.67e-25 105
MsG0380011501.01.T01 AT5G03610 29.260 311 191 13 29 326 44 338 3.47e-25 105
MsG0380011501.01.T01 AT1G28590 25.967 362 218 14 12 339 20 365 1.40e-24 103
MsG0380011501.01.T01 AT3G26430 28.955 335 201 11 25 329 28 355 1.53e-23 100
MsG0380011501.01.T01 AT5G03600 26.582 316 195 10 24 326 10 301 1.39e-22 97.1
MsG0380011501.01.T01 AT5G03600 26.582 316 195 10 24 326 45 336 1.45e-22 97.4
MsG0380011501.01.T01 AT4G16220 49.558 113 52 4 8 116 9 120 1.47e-22 95.5
MsG0380011501.01.T01 AT1G54030 27.413 259 166 9 29 283 53 293 4.82e-22 95.5
MsG0380011501.01.T01 AT3G05180 25.872 344 220 9 25 340 33 369 3.39e-21 94.0
MsG0380011501.01.T01 AT3G09930 26.183 317 194 10 29 326 40 335 3.10e-20 90.9
MsG0380011501.01.T01 AT3G09930 26.183 317 194 10 29 326 40 335 3.10e-20 90.9
MsG0380011501.01.T01 AT1G56670 25.434 346 219 10 11 333 23 352 1.92e-19 89.0
MsG0380011501.01.T01 AT4G01130 25.085 295 191 8 10 283 13 298 4.63e-19 87.4
MsG0380011501.01.T01 AT1G54020 24.910 277 185 9 82 352 1 260 5.52e-19 86.3
MsG0380011501.01.T01 AT1G54020 24.910 277 185 9 82 352 1 260 5.52e-19 86.3
MsG0380011501.01.T01 AT1G54020 24.910 277 185 9 82 352 1 260 5.52e-19 86.3
MsG0380011501.01.T01 AT3G62280 24.484 339 219 10 27 341 35 360 2.12e-18 85.9
MsG0380011501.01.T01 AT1G09390 24.363 353 216 12 11 333 18 349 2.60e-17 82.8
MsG0380011501.01.T01 AT1G54790 23.913 368 239 11 4 340 8 365 4.75e-17 82.0
MsG0380011501.01.T01 AT1G54020 24.878 205 147 4 152 352 10 211 5.76e-16 77.0
MsG0380011501.01.T01 AT1G28600 28.436 211 133 7 1 199 1 205 6.56e-15 73.6
MsG0380011501.01.T01 AT4G01130 21.993 291 190 8 84 343 1 285 8.05e-15 74.7
MsG0380011501.01.T01 AT1G28610 33.571 140 84 3 12 142 15 154 1.02e-14 73.6
MsG0380011501.01.T01 AT1G54790 22.826 368 239 11 8 340 7 364 1.17e-14 74.7
MsG0380011501.01.T01 AT3G14210 25.641 234 151 8 135 352 2 228 3.40e-14 72.4
MsG0380011501.01.T01 AT2G36325 25.879 313 193 14 28 323 47 337 1.28e-12 68.6
MsG0380011501.01.T01 AT1G56670 24.742 291 185 8 11 283 23 297 1.78e-11 64.7
MsG0380011501.01.T01 AT1G53970 48.571 70 32 2 21 88 15 82 3.91e-11 59.7
MsG0380011501.01.T01 AT1G53970 48.571 70 32 2 21 88 15 82 3.91e-11 59.7

Find 84 sgRNAs with CRISPR-Local

Find 268 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGTCCATTGTACTGATTTC+TGG 0.105484 3:+535302 None:intergenic
AACACATAACGGTTTCTATT+AGG 0.156071 3:+533325 None:intergenic
TGACAGTTCCCGCATGTTTC+AGG 0.200489 3:-534757 MsG0380011501.01.T01:CDS
TCCATTGTATGCAGGAATTA+AGG 0.200828 3:+536098 None:intergenic
ATAGAAACCGTTATGTGTTT+TGG 0.234977 3:-533321 MsG0380011501.01.T01:CDS
TGAACATGGCAGGAACATTT+TGG 0.236523 3:+537858 None:intergenic
TGATTTCTGGTGTTATAATT+AGG 0.237352 3:+535315 None:intergenic
AGAAGCAGTTAACATTCTTA+TGG 0.245755 3:-533281 MsG0380011501.01.T01:CDS
AATCAACTTACTGGAAATAT+TGG 0.248422 3:-535423 MsG0380011501.01.T01:CDS
GTTCCTGCCATGTTCATATT+TGG 0.257412 3:-537851 MsG0380011501.01.T01:CDS
TTCTATTAGGGCATGGAGTT+TGG 0.264599 3:+533338 None:intergenic
AAATTTGTGATTGCTGGATT+AGG 0.286484 3:-534933 MsG0380011501.01.T01:CDS
GGTGACTCACTTATTGATAA+TGG 0.288022 3:-537830 MsG0380011501.01.T01:CDS
ACACATAACGGTTTCTATTA+GGG 0.291204 3:+533326 None:intergenic
TCATAGAGGCTTTACAATCT+TGG 0.298958 3:-534963 MsG0380011501.01.T01:intron
GTTGATAGGATAAACAAAAT+TGG 0.302716 3:+533234 None:intergenic
AATTTGTGATTGCTGGATTA+GGG 0.341456 3:-534932 MsG0380011501.01.T01:CDS
TAGGCATAAGGTAGTTGTTT+AGG 0.350426 3:+535334 None:intergenic
GCAAGGAAATTTGTGATTGC+TGG 0.351908 3:-534939 MsG0380011501.01.T01:CDS
AGGAGTATCTCAAATATTCT+TGG 0.354427 3:-537915 MsG0380011501.01.T01:CDS
GAAGCAGTTAACATTCTTAT+GGG 0.360735 3:-533280 MsG0380011501.01.T01:CDS
GATTGCTGGATTAGGGCTAT+TGG 0.366814 3:-534925 MsG0380011501.01.T01:CDS
AATACATTGAATCAACTTAC+TGG 0.367293 3:-535432 MsG0380011501.01.T01:CDS
AAATATTGGAGCAGATAATA+TGG 0.380686 3:-535409 MsG0380011501.01.T01:CDS
AATAGAGGGTGTTGTGGCCT+TGG 0.400540 3:-533394 MsG0380011501.01.T01:CDS
CCATATGGTATTGACTTCAA+TGG 0.404544 3:-537764 MsG0380011501.01.T01:CDS
TGCATATTCTTTGTTGGAAT+GGG 0.406897 3:-535369 MsG0380011501.01.T01:CDS
AATATTCTTGGTGCTTATCA+TGG 0.407270 3:-537903 MsG0380011501.01.T01:CDS
TCAAGGTGCATATTCTTTGT+TGG 0.407331 3:-535375 MsG0380011501.01.T01:CDS
TTTCTAAGTTGTTCATCAAA+TGG 0.410995 3:+535462 None:intergenic
ATTGCTGGATTAGGGCTATT+GGG 0.411186 3:-534924 MsG0380011501.01.T01:CDS
GTGCATATTCTTTGTTGGAA+TGG 0.415630 3:-535370 MsG0380011501.01.T01:CDS
AACTATGCTTCAGCTGCTGC+TGG 0.416729 3:-536045 MsG0380011501.01.T01:CDS
ACTGTCAATGAATATGAATC+TGG 0.420747 3:+534773 None:intergenic
CCATTGTATGCAGGAATTAA+GGG 0.432472 3:+536099 None:intergenic
TGGTGTTATAATTAGGCATA+AGG 0.444978 3:+535322 None:intergenic
TACACTATTGTTGATGAGAT+AGG 0.446947 3:-537713 MsG0380011501.01.T01:intron
CCGACTGGTCGCTTCTCAAA+TGG 0.461318 3:-537737 MsG0380011501.01.T01:CDS
AACTTGTTGATGGCTAAGTT+AGG 0.461610 3:-537935 None:intergenic
ACAGGGGATCAAATGCTTCA+TGG 0.465834 3:-536072 MsG0380011501.01.T01:CDS
TTTGACCTCTGTTTCTTCCA+AGG 0.467001 3:+533377 None:intergenic
GACTTCAATGGTGGACCGAC+TGG 0.471274 3:-537752 MsG0380011501.01.T01:CDS
GTGCTTATCATGGTCTTAAG+TGG 0.474885 3:-537893 MsG0380011501.01.T01:CDS
GCAAGTTGCTGAATGTTGAT+AGG 0.475041 3:+533220 None:intergenic
CCATTGAAGTCAATACCATA+TGG 0.485315 3:+537764 None:intergenic
GTCTTAAGTGGTGCAGTCAC+AGG 0.491965 3:-537881 MsG0380011501.01.T01:CDS
GTACTTTGAGACAATATGCT+TGG 0.495491 3:+534894 None:intergenic
AGTTTCTTCCTGTGTCATCA+AGG 0.499279 3:+536019 None:intergenic
CCCTTAATTCCTGCATACAA+TGG 0.500965 3:-536099 MsG0380011501.01.T01:CDS
ATTAATGCAGCTGAACTGCT+TGG 0.518858 3:-536126 MsG0380011501.01.T01:intron
AAAATCTTACAGTGAGTTGG+TGG 0.521224 3:+535247 None:intergenic
TAACATTCTTATGGGAAGGA+TGG 0.522951 3:-533272 MsG0380011501.01.T01:CDS
AGAATGTTAACTGCTTCTGT+TGG 0.524513 3:+533286 None:intergenic
CCTGCATACAATGGAGCCAC+AGG 0.527292 3:-536090 MsG0380011501.01.T01:CDS
ACAACAGTATGCAGATCTCT+TGG 0.538203 3:-535283 MsG0380011501.01.T01:CDS
GGCTTTACAATCTTGGAGCA+AGG 0.555445 3:-534956 MsG0380011501.01.T01:CDS
GGATTTACTGATGTGAATAG+AGG 0.556382 3:-533409 MsG0380011501.01.T01:CDS
CCTGTGGCTCCATTGTATGC+AGG 0.556576 3:+536090 None:intergenic
CAGTTAACATTCTTATGGGA+AGG 0.561855 3:-533276 MsG0380011501.01.T01:CDS
AAGAATTTCCTGAAACATGC+GGG 0.562469 3:+534749 None:intergenic
ATATGGCCACACAACTATCA+AGG 0.568666 3:-535392 MsG0380011501.01.T01:CDS
TAACGGTTTCTATTAGGGCA+TGG 0.577323 3:+533331 None:intergenic
ATGCATCCCAAAACACATAA+CGG 0.580317 3:+533314 None:intergenic
TTAGGGCATGGAGTTTGGAA+TGG 0.580915 3:+533343 None:intergenic
AAAGAATTTCCTGAAACATG+CGG 0.581975 3:+534748 None:intergenic
TCACCAAATATGAACATGGC+AGG 0.584345 3:+537848 None:intergenic
ATGAATATGAATCTGGAACC+AGG 0.592151 3:+534780 None:intergenic
GATTTACTGATGTGAATAGA+GGG 0.596598 3:-533408 MsG0380011501.01.T01:CDS
ACCCTTCAATGAAAATGTGA+AGG 0.599178 3:-534832 MsG0380011501.01.T01:CDS
TATGGTATTGACTTCAATGG+TGG 0.612409 3:-537761 MsG0380011501.01.T01:CDS
CTGCATACAATGGAGCCACA+GGG 0.613356 3:-536089 MsG0380011501.01.T01:CDS
ATTGTTGAGATTGCTCAACA+TGG 0.613583 3:+534809 None:intergenic
AACACCAGAAATCAGTACAA+TGG 0.625168 3:-535306 MsG0380011501.01.T01:CDS
AATCTCAACAATAATCTACC+TGG 0.630593 3:-534798 MsG0380011501.01.T01:CDS
ATGAAGCATTTGATCCCCTG+TGG 0.639449 3:+536074 None:intergenic
GCTGGAATCCTTGATGACAC+AGG 0.646017 3:-536027 MsG0380011501.01.T01:CDS
TGAGTCACCAAATATGAACA+TGG 0.664105 3:+537844 None:intergenic
TAATGGTAACAATAACAACA+TGG 0.669382 3:-537813 MsG0380011501.01.T01:CDS
CCATTTGAGAAGCGACCAGT+CGG 0.684087 3:+537737 None:intergenic
TGTGGCCTTGGAAGAAACAG+AGG 0.691165 3:-533382 MsG0380011501.01.T01:CDS
TGCATACAATGGAGCCACAG+GGG 0.692778 3:-536088 MsG0380011501.01.T01:CDS
ATATTGTCTCAAAGTACGAG+TGG 0.701049 3:-534888 MsG0380011501.01.T01:CDS
TATGCACCTTGATAGTTGTG+TGG 0.718978 3:+535386 None:intergenic
GATGTGAATAGAGGGTGTTG+TGG 0.728907 3:-533400 MsG0380011501.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATCTAAAGTAATTTATTTT+TGG + Chr3:535540-535559 None:intergenic 10.0%
!!! ATAACTAAATTAAATTTTTG+AGG + Chr3:537018-537037 None:intergenic 10.0%
!!! TAAAATTGGATTTTTATTAT+TGG - Chr3:537311-537330 MsG0380011501.01.T01:intron 10.0%
!!! TTACTTTAAAAAATGTTTTA+AGG - Chr3:534431-534450 MsG0380011501.01.T01:intron 10.0%
!!! TTTTTTAACTTATTGTTTTT+TGG - Chr3:533952-533971 MsG0380011501.01.T01:intron 10.0%
!! AACAAATTTCGATAATAATT+TGG - Chr3:536532-536551 MsG0380011501.01.T01:intron 15.0%
!! AACATAAGAGATATAAATAT+TGG - Chr3:533619-533638 MsG0380011501.01.T01:intron 15.0%
!! ATATTTGAAAACAATTTAGA+TGG - Chr3:537416-537435 MsG0380011501.01.T01:intron 15.0%
!! ATTTGCAAAAGAAAAATATT+GGG - Chr3:535193-535212 MsG0380011501.01.T01:intron 15.0%
!! CAAAAAAAAAAAAAAAGTTG+AGG - Chr3:537137-537156 MsG0380011501.01.T01:intron 15.0%
!! TATCACAAACAAATTTAAAA+TGG + Chr3:533655-533674 None:intergenic 15.0%
!! TATTATATTCATTAATCATC+CGG + Chr3:536583-536602 None:intergenic 15.0%
!! TATTTGCAAAAGAAAAATAT+TGG - Chr3:535192-535211 MsG0380011501.01.T01:intron 15.0%
!! TTATGTTTAAATGCAAATTA+TGG - Chr3:536662-536681 MsG0380011501.01.T01:intron 15.0%
!!! AACTTTTTTTTTTTTTTTGG+TGG + Chr3:537136-537155 None:intergenic 15.0%
!!! ACTCACTAATATTTTTTTAA+GGG - Chr3:534558-534577 MsG0380011501.01.T01:intron 15.0%
!!! CTCAACTTTTTTTTTTTTTT+TGG + Chr3:537139-537158 None:intergenic 15.0%
!!! TAATAAAAATCCAATTTTAC+CGG + Chr3:537310-537329 None:intergenic 15.0%
!!! TACTCACTAATATTTTTTTA+AGG - Chr3:534557-534576 MsG0380011501.01.T01:intron 15.0%
!! AAAACAATTTAGATGGTTAA+TGG - Chr3:537423-537442 MsG0380011501.01.T01:intron 20.0%
!! AAATGGATACAAATAGAAAA+TGG - Chr3:533555-533574 MsG0380011501.01.T01:intron 20.0%
!! AACAACAAAAAAAGTTGTAT+CGG + Chr3:536742-536761 None:intergenic 20.0%
!! AATTTCGATAATAATTTGGA+TGG - Chr3:536536-536555 MsG0380011501.01.T01:intron 20.0%
!! ATAACCAATTAATTATTCAG+TGG + Chr3:535625-535644 None:intergenic 20.0%
!! ATAGTGCAAATATTCTAAAT+AGG + Chr3:534657-534676 None:intergenic 20.0%
!! CAACAATTTATATTAAGAGA+AGG + Chr3:533702-533721 None:intergenic 20.0%
!! CTTCAAATTAATTAAGACTT+AGG + Chr3:534073-534092 None:intergenic 20.0%
!! TAATATAAATTGTTGTCTCA+AGG - Chr3:533707-533726 MsG0380011501.01.T01:intron 20.0%
!! TATAATGATACATTAGTTGA+GGG - Chr3:537035-537054 MsG0380011501.01.T01:intron 20.0%
!! TTATAATGATACATTAGTTG+AGG - Chr3:537034-537053 MsG0380011501.01.T01:intron 20.0%
!! TTATGTTTAAACGCAAATTA+TGG - Chr3:536761-536780 MsG0380011501.01.T01:intron 20.0%
!!! AAAATGTTTTAAGGTTTTTC+AGG - Chr3:534440-534459 MsG0380011501.01.T01:intron 20.0%
!!! AATAAAAATCCAATTTTACC+GGG + Chr3:537309-537328 None:intergenic 20.0%
!!! GATTAAATTAGTGTGTTTTT+TGG - Chr3:533771-533790 MsG0380011501.01.T01:intron 20.0%
!!! TTAAGTTTAAAATTGTGCAT+TGG - Chr3:534819-534838 MsG0380011501.01.T01:CDS 20.0%
!!! TTTGTTTTTTTGTTGTTGAT+TGG + Chr3:534328-534347 None:intergenic 20.0%
! AAAAACCCTAATAGAACATT+CGG - Chr3:535304-535323 MsG0380011501.01.T01:CDS 25.0%
! AAATATTGGAGCAGATAATA+TGG - Chr3:535727-535746 MsG0380011501.01.T01:intron 25.0%
! AAGACAATTGATGAATAAGA+GGG + Chr3:533451-533470 None:intergenic 25.0%
! AATACATTGAATCAACTTAC+TGG - Chr3:535704-535723 MsG0380011501.01.T01:intron 25.0%
! AATCAACTTACTGGAAATAT+TGG - Chr3:535713-535732 MsG0380011501.01.T01:intron 25.0%
! AATTAATTAAGACTTAGGTG+TGG + Chr3:534068-534087 None:intergenic 25.0%
! ATGTGGTTAATTATGTTTAG+TGG + Chr3:537557-537576 None:intergenic 25.0%
! CTAAATAGGTCAAGTAATAT+GGG + Chr3:534643-534662 None:intergenic 25.0%
! CTTTAGATCTTTAAACATGT+TGG - Chr3:537373-537392 MsG0380011501.01.T01:intron 25.0%
! TAAAAAATCTTACAGTGAGT+TGG + Chr3:535895-535914 None:intergenic 25.0%
! TAAATATGTGTTACATACAC+CGG - Chr3:536561-536580 MsG0380011501.01.T01:intron 25.0%
! TAAGACAATTGATGAATAAG+AGG + Chr3:533452-533471 None:intergenic 25.0%
! TAATGGTAACAATAACAACA+TGG - Chr3:533323-533342 MsG0380011501.01.T01:CDS 25.0%
! TAGATTTGTAAAATTGAGTC+TGG + Chr3:535577-535596 None:intergenic 25.0%
! TAGTGAGTAAAAAGAAACTA+GGG + Chr3:534546-534565 None:intergenic 25.0%
! TCTAAATAGGTCAAGTAATA+TGG + Chr3:534644-534663 None:intergenic 25.0%
! TGAGCATTCTTTATAGTAAA+AGG - Chr3:534229-534248 MsG0380011501.01.T01:intron 25.0%
! TTAATCTACCTAATTTGACT+AGG + Chr3:534300-534319 None:intergenic 25.0%
! TTAGTGAGTAAAAAGAAACT+AGG + Chr3:534547-534566 None:intergenic 25.0%
! TTTCTAAGTTGTTCATCAAA+TGG + Chr3:535677-535696 None:intergenic 25.0%
!! AAAGCTAACTATTTTCCATA+TGG - Chr3:533357-533376 MsG0380011501.01.T01:CDS 25.0%
!! AAATGTGTAAGATTTTCATC+AGG - Chr3:534496-534515 MsG0380011501.01.T01:intron 25.0%
!! AAGAGATTTGTCTAATCTTT+TGG + Chr3:534206-534225 None:intergenic 25.0%
!! AAGCAAAAAGAAGCTTTTAT+GGG - Chr3:533744-533763 MsG0380011501.01.T01:intron 25.0%
!! AATGTGATAATGACAAACTA+TGG + Chr3:533480-533499 None:intergenic 25.0%
!! ATGACTGTGTTTTATATGTT+TGG - Chr3:534167-534186 MsG0380011501.01.T01:intron 25.0%
!! CTAAAGCAAATTTTATGATG+AGG + Chr3:537359-537378 None:intergenic 25.0%
!! GTTGATAGGATAAACAAAAT+TGG + Chr3:537905-537924 None:intergenic 25.0%
!! TAAGCAAAAAGAAGCTTTTA+TGG - Chr3:533743-533762 MsG0380011501.01.T01:intron 25.0%
!! TAGTAAAAGGTGCATTAAAT+AGG - Chr3:534242-534261 MsG0380011501.01.T01:intron 25.0%
!!! GTCAAAATTATTTCTACACT+TGG + Chr3:535378-535397 None:intergenic 25.0%
!!! TGATTTCTGGTGTTATAATT+AGG + Chr3:535824-535843 None:intergenic 25.0%
AAAGAATTTCCTGAAACATG+CGG + Chr3:536391-536410 None:intergenic 30.0%
AAATATTGGGAAAAGCGATA+AGG - Chr3:535206-535225 MsG0380011501.01.T01:intron 30.0%
AAATTCAGATTCCAAGCTTA+AGG - Chr3:533882-533901 MsG0380011501.01.T01:intron 30.0%
AAATTTGTGATTGCTGGATT+AGG - Chr3:536203-536222 MsG0380011501.01.T01:intron 30.0%
AACACATAACGGTTTCTATT+AGG + Chr3:537814-537833 None:intergenic 30.0%
AATCTCAACAATAATCTACC+TGG - Chr3:536338-536357 MsG0380011501.01.T01:intron 30.0%
AATTTGTGATTGCTGGATTA+GGG - Chr3:536204-536223 MsG0380011501.01.T01:intron 30.0%
ACACATAACGGTTTCTATTA+GGG + Chr3:537813-537832 None:intergenic 30.0%
ACTGTCAATGAATATGAATC+TGG + Chr3:536366-536385 None:intergenic 30.0%
AGAAGCAGTTAACATTCTTA+TGG - Chr3:537855-537874 MsG0380011501.01.T01:CDS 30.0%
ATGATGCATAATTCATAGCA+GGG + Chr3:534958-534977 None:intergenic 30.0%
ATTAGTACTTCAATCATGCA+TGG + Chr3:533503-533522 None:intergenic 30.0%
GAAGCAGTTAACATTCTTAT+GGG - Chr3:537856-537875 MsG0380011501.01.T01:CDS 30.0%
GATCTTTAAACATGTTGGAT+CGG - Chr3:537378-537397 MsG0380011501.01.T01:intron 30.0%
GATTTACTGATGTGAATAGA+GGG - Chr3:537728-537747 MsG0380011501.01.T01:CDS 30.0%
GCATTAAATAGGACATTGTA+GGG - Chr3:534253-534272 MsG0380011501.01.T01:intron 30.0%
GTCACCACTGAATAATTAAT+TGG - Chr3:535618-535637 MsG0380011501.01.T01:intron 30.0%
TAATTCTGCCTAGTCAAATT+AGG - Chr3:534289-534308 MsG0380011501.01.T01:intron 30.0%
TAGTTGTTTACCCTATTGAT+TGG + Chr3:534045-534064 None:intergenic 30.0%
TATGATGCATAATTCATAGC+AGG + Chr3:534959-534978 None:intergenic 30.0%
TCAACTAGGTCAAGTAATAT+GGG - Chr3:534856-534875 MsG0380011501.01.T01:CDS 30.0%
TCTCAAATTATTAGCAGTGT+TGG - Chr3:536062-536081 MsG0380011501.01.T01:CDS 30.0%
TGCATATTCTTTGTTGGAAT+GGG - Chr3:535767-535786 MsG0380011501.01.T01:intron 30.0%
TGCATTAAATAGGACATTGT+AGG - Chr3:534252-534271 MsG0380011501.01.T01:intron 30.0%
TGGATTCATCAATGTAAAAG+CGG + Chr3:535520-535539 None:intergenic 30.0%
TGTGTAAAAGATACTCGTTT+GGG - Chr3:534907-534926 MsG0380011501.01.T01:CDS 30.0%
TTGTGTAAAAGATACTCGTT+TGG - Chr3:534906-534925 MsG0380011501.01.T01:CDS 30.0%
TTGTGTGTGTGAGTTTATAA+TGG - Chr3:536890-536909 MsG0380011501.01.T01:intron 30.0%
TTTGACAAGAATGTAGTTCT+AGG + Chr3:535938-535957 None:intergenic 30.0%
! ACCTTTTTGTGCATTTCAAA+TGG - Chr3:533538-533557 MsG0380011501.01.T01:intron 30.0%
! AGGTCAAAGGTTAATTTTCA+AGG - Chr3:536122-536141 MsG0380011501.01.T01:intron 30.0%
! AGTTAAGTTTGTTTGTGTGT+AGG - Chr3:537706-537725 MsG0380011501.01.T01:intron 30.0%
! ATAGAAACCGTTATGTGTTT+TGG - Chr3:537815-537834 MsG0380011501.01.T01:CDS 30.0%
! CTGTGTTTTATATGTTTGGT+TGG - Chr3:534171-534190 MsG0380011501.01.T01:intron 30.0%
! CTTTACATGACGATTTTGAA+AGG - Chr3:535263-535282 MsG0380011501.01.T01:CDS 30.0%
! CTTTTCAATGCAAGATCATA+TGG - Chr3:536407-536426 MsG0380011501.01.T01:intron 30.0%
! GGTCAAAGGTTAATTTTCAA+GGG - Chr3:536123-536142 MsG0380011501.01.T01:intron 30.0%
! GTTATCTTTTGAATTTGAGC+AGG - Chr3:535640-535659 MsG0380011501.01.T01:intron 30.0%
! TACACTATTGTTGATGAGAT+AGG - Chr3:533423-533442 MsG0380011501.01.T01:intron 30.0%
! TAGAAACCGTTATGTGTTTT+GGG - Chr3:537816-537835 MsG0380011501.01.T01:CDS 30.0%
! TCCATTTGAAATGCACAAAA+AGG + Chr3:533542-533561 None:intergenic 30.0%
!! AATATTCTTGGTGCTTATCA+TGG - Chr3:533233-533252 MsG0380011501.01.T01:CDS 30.0%
!! AGGAGTATCTCAAATATTCT+TGG - Chr3:533221-533240 MsG0380011501.01.T01:CDS 30.0%
!! CACTCTTTAAGACCTTTAAA+TGG - Chr3:534605-534624 MsG0380011501.01.T01:intron 30.0%
!! TGGTGTTATAATTAGGCATA+AGG + Chr3:535817-535836 None:intergenic 30.0%
!!! AAAGTGTCTTTTGAGTTTTG+AGG - Chr3:533979-533998 MsG0380011501.01.T01:intron 30.0%
AACACCAGAAATCAGTACAA+TGG - Chr3:535830-535849 MsG0380011501.01.T01:intron 35.0%
AACATTAGACCCGGTAAAAT+TGG - Chr3:537297-537316 MsG0380011501.01.T01:intron 35.0%
AACCTTTGACCTATGAAACA+CGG + Chr3:536114-536133 None:intergenic 35.0%
AAGAATTTCCTGAAACATGC+GGG + Chr3:536390-536409 None:intergenic 35.0%
AATGTTTGAACCTATGTCAG+AGG + Chr3:537237-537256 None:intergenic 35.0%
ACCCTTCAATGAAAATGTGA+AGG - Chr3:536304-536323 MsG0380011501.01.T01:intron 35.0%
AGAATGTTAACTGCTTCTGT+TGG + Chr3:537853-537872 None:intergenic 35.0%
AGACAAAAAGTCCTTAAGCT+TGG + Chr3:533896-533915 None:intergenic 35.0%
ATAGGTCAAGTAATATGGGA+CGG + Chr3:534639-534658 None:intergenic 35.0%
ATAGGTTCAAACATTAGACC+CGG - Chr3:537242-537261 MsG0380011501.01.T01:intron 35.0%
ATATTGTCTCAAAGTACGAG+TGG - Chr3:536248-536267 MsG0380011501.01.T01:intron 35.0%
ATGCAACCGAATGTTCTATT+AGG + Chr3:535313-535332 None:intergenic 35.0%
ATGCATCCCAAAACACATAA+CGG + Chr3:537825-537844 None:intergenic 35.0%
ATGTTTGAACCTATGTCAGA+GGG + Chr3:537236-537255 None:intergenic 35.0%
ATTGTTGAGATTGCTCAACA+TGG + Chr3:536330-536349 None:intergenic 35.0%
CAGTTAACATTCTTATGGGA+AGG - Chr3:537860-537879 MsG0380011501.01.T01:CDS 35.0%
CATAATATATGCAAGGTCTG+GGG - Chr3:537095-537114 MsG0380011501.01.T01:intron 35.0%
CCATTGAAGTCAATACCATA+TGG + Chr3:533375-533394 None:intergenic 35.0%
CCATTGTATGCAGGAATTAA+GGG + Chr3:535040-535059 None:intergenic 35.0%
GAAATCAAAGCTAAGACTCT+AGG - Chr3:536966-536985 MsG0380011501.01.T01:intron 35.0%
GAAGATTAAGACACATGACT+TGG + Chr3:537535-537554 None:intergenic 35.0%
GACAGTGCATAATATATGCA+AGG - Chr3:537088-537107 MsG0380011501.01.T01:intron 35.0%
GCATAATATATGCAAGGTCT+GGG - Chr3:537094-537113 MsG0380011501.01.T01:intron 35.0%
GGATTTACTGATGTGAATAG+AGG - Chr3:537727-537746 MsG0380011501.01.T01:CDS 35.0%
GGTGACTCACTTATTGATAA+TGG - Chr3:533306-533325 MsG0380011501.01.T01:CDS 35.0%
GTCAACTAGGTCAAGTAATA+TGG - Chr3:534855-534874 MsG0380011501.01.T01:CDS 35.0%
GTGCATATTCTTTGTTGGAA+TGG - Chr3:535766-535785 MsG0380011501.01.T01:intron 35.0%
TAACATTCTTATGGGAAGGA+TGG - Chr3:537864-537883 MsG0380011501.01.T01:CDS 35.0%
TACAAGGCTACCAATCAATA+GGG - Chr3:534032-534051 MsG0380011501.01.T01:intron 35.0%
TAGGCATAAGGTAGTTGTTT+AGG + Chr3:535805-535824 None:intergenic 35.0%
TATAAACTCACACACACAAG+TGG + Chr3:536889-536908 None:intergenic 35.0%
TCAAGGTGCATATTCTTTGT+TGG - Chr3:535761-535780 MsG0380011501.01.T01:intron 35.0%
TCATAGAGGCTTTACAATCT+TGG - Chr3:536173-536192 MsG0380011501.01.T01:intron 35.0%
TCCATTGTATGCAGGAATTA+AGG + Chr3:535041-535060 None:intergenic 35.0%
TGAGTCACCAAATATGAACA+TGG + Chr3:533295-533314 None:intergenic 35.0%
TGCAACCGAATGTTCTATTA+GGG + Chr3:535312-535331 None:intergenic 35.0%
TGCAACTCATTAAACTTCCA+CGG - Chr3:536609-536628 MsG0380011501.01.T01:intron 35.0%
TGCAGTTCAAATATGCAATG+TGG + Chr3:537574-537593 None:intergenic 35.0%
TGCATAATATATGCAAGGTC+TGG - Chr3:537093-537112 MsG0380011501.01.T01:intron 35.0%
TTCAGTGTAATCACATGTGT+CGG + Chr3:536031-536050 None:intergenic 35.0%
TTCTAACTTGAAGCAGGAAT+TGG - Chr3:535445-535464 MsG0380011501.01.T01:CDS 35.0%
TTGTAGTTAATTACCTACCG+TGG + Chr3:536629-536648 None:intergenic 35.0%
TTTGTCCTATTCCAACTACA+AGG - Chr3:534016-534035 MsG0380011501.01.T01:intron 35.0%
! AAAATCTTACAGTGAGTTGG+TGG + Chr3:535892-535911 None:intergenic 35.0%
! AATCGATTCTAACTTGAAGC+AGG - Chr3:535439-535458 MsG0380011501.01.T01:CDS 35.0%
! AGCTTAAGGACTTTTTGTCT+TGG - Chr3:533896-533915 MsG0380011501.01.T01:intron 35.0%
! ATGAATATGAATCTGGAACC+AGG + Chr3:536359-536378 None:intergenic 35.0%
! CATGATGTGTTTTGTCATAG+AGG - Chr3:536159-536178 MsG0380011501.01.T01:intron 35.0%
! CTTTTGAATTTGAGCAGGTT+GGG - Chr3:535645-535664 MsG0380011501.01.T01:intron 35.0%
! GCCTTCACATTTTCATTGAA+GGG + Chr3:536308-536327 None:intergenic 35.0%
! TAATTCATAGCAGGGTACTT+TGG + Chr3:534950-534969 None:intergenic 35.0%
! TCTTTTGAATTTGAGCAGGT+TGG - Chr3:535644-535663 MsG0380011501.01.T01:intron 35.0%
!! CCATATGGTATTGACTTCAA+TGG - Chr3:533372-533391 MsG0380011501.01.T01:CDS 35.0%
!! GTACTTTGAGACAATATGCT+TGG + Chr3:536245-536264 None:intergenic 35.0%
!! GTTGATGACGTTTAAAACTG+TGG - Chr3:537479-537498 MsG0380011501.01.T01:intron 35.0%
!! TATGGTATTGACTTCAATGG+TGG - Chr3:533375-533394 MsG0380011501.01.T01:CDS 35.0%
!! TTGTCCATTGTACTGATTTC+TGG + Chr3:535837-535856 None:intergenic 35.0%
!!! TTTTTTTTTGGTGGTGTCCA+GGG + Chr3:537127-537146 None:intergenic 35.0%
!!! TTTTTTTTTTGGTGGTGTCC+AGG + Chr3:537128-537147 None:intergenic 35.0%
AAAGCTAAGACTCTAGGCTT+CGG - Chr3:536972-536991 MsG0380011501.01.T01:intron 40.0%
AAATGCCGAAATTGTTAGGC+CGG - Chr3:536831-536850 MsG0380011501.01.T01:intron 40.0%
ACAACAGTATGCAGATCTCT+TGG - Chr3:535853-535872 MsG0380011501.01.T01:intron 40.0%
ACACTTGGCAAGTGACAAAA+TGG + Chr3:535363-535382 None:intergenic 40.0%
ACATTGTAGGGTCTGTAGTT+TGG - Chr3:534265-534284 MsG0380011501.01.T01:intron 40.0%
ACTCATTAAACTTCCACGGT+AGG - Chr3:536613-536632 MsG0380011501.01.T01:intron 40.0%
AGTTTCTTCCTGTGTCATCA+AGG + Chr3:535120-535139 None:intergenic 40.0%
ATATGGCCACACAACTATCA+AGG - Chr3:535744-535763 MsG0380011501.01.T01:intron 40.0%
ATCCGTGTTTCATAGGTCAA+AGG - Chr3:536109-536128 MsG0380011501.01.T01:CDS 40.0%
ATGAAACACGGATACGAACA+TGG + Chr3:536102-536121 None:intergenic 40.0%
ATTAATGCAGCTGAACTGCT+TGG - Chr3:535010-535029 MsG0380011501.01.T01:intron 40.0%
ATTGGGAAAAGCGATAAGGT+TGG - Chr3:535210-535229 MsG0380011501.01.T01:intron 40.0%
CATTGTAGGGTCTGTAGTTT+GGG - Chr3:534266-534285 MsG0380011501.01.T01:intron 40.0%
CCCTTAATTCCTGCATACAA+TGG - Chr3:535037-535056 MsG0380011501.01.T01:intron 40.0%
CGGATTGAACGATACATTCA+AGG + Chr3:535500-535519 None:intergenic 40.0%
CTACAAGGCTACCAATCAAT+AGG - Chr3:534031-534050 MsG0380011501.01.T01:intron 40.0%
CTAGGTCAAGTAATATGGGA+CGG - Chr3:534860-534879 MsG0380011501.01.T01:CDS 40.0%
GCAAGGAAATTTGTGATTGC+TGG - Chr3:536197-536216 MsG0380011501.01.T01:intron 40.0%
GCAAGTTGCTGAATGTTGAT+AGG + Chr3:537919-537938 None:intergenic 40.0%
GGCAAAATGCCGAAATTGTT+AGG - Chr3:536827-536846 MsG0380011501.01.T01:intron 40.0%
GTCAAAGACTGTATGAAGCA+CGG - Chr3:535952-535971 MsG0380011501.01.T01:intron 40.0%
GTTCCTGCCATGTTCATATT+TGG - Chr3:533285-533304 MsG0380011501.01.T01:CDS 40.0%
TAACGGTTTCTATTAGGGCA+TGG + Chr3:537808-537827 None:intergenic 40.0%
TACCAACTGAGTTAAGCTCA+CGG + Chr3:537066-537085 None:intergenic 40.0%
TCACCAAATATGAACATGGC+AGG + Chr3:533291-533310 None:intergenic 40.0%
TGTTCGTATCCGTGTTTCAT+AGG - Chr3:536102-536121 MsG0380011501.01.T01:CDS 40.0%
TGTTTGAACCTATGTCAGAG+GGG + Chr3:537235-537254 None:intergenic 40.0%
TTCTATTAGGGCATGGAGTT+TGG + Chr3:537801-537820 None:intergenic 40.0%
! ATGGGAAGGATGGCTTTTAA+TGG - Chr3:537874-537893 MsG0380011501.01.T01:CDS 40.0%
! ATTGCTGGATTAGGGCTATT+GGG - Chr3:536212-536231 MsG0380011501.01.T01:intron 40.0%
! GGCCTTCACATTTTCATTGA+AGG + Chr3:536309-536328 None:intergenic 40.0%
! GTGCTTATCATGGTCTTAAG+TGG - Chr3:533243-533262 MsG0380011501.01.T01:CDS 40.0%
! TATGCACCTTGATAGTTGTG+TGG + Chr3:535753-535772 None:intergenic 40.0%
! TGAACATGGCAGGAACATTT+TGG + Chr3:533281-533300 None:intergenic 40.0%
! TGAGCTTAACTCAGTTGGTA+AGG - Chr3:537066-537085 MsG0380011501.01.T01:intron 40.0%
! TTTGACCTCTGTTTCTTCCA+AGG + Chr3:537762-537781 None:intergenic 40.0%
!! TTGATTGGTAGCCTTGTAGT+TGG + Chr3:534030-534049 None:intergenic 40.0%
AAACTCACACACACAAGTGG+AGG + Chr3:536886-536905 None:intergenic 45.0%
ACAGGGGATCAAATGCTTCA+TGG - Chr3:535064-535083 MsG0380011501.01.T01:intron 45.0%
ACCAACTGAGTTAAGCTCAC+GGG + Chr3:537065-537084 None:intergenic 45.0%
CATACGTGACAGAGTCAACT+AGG - Chr3:534842-534861 MsG0380011501.01.T01:CDS 45.0%
GATTAGGCGTGTTTCAGTGT+CGG - Chr3:535985-536004 MsG0380011501.01.T01:intron 45.0%
GGCTTTACAATCTTGGAGCA+AGG - Chr3:536180-536199 MsG0380011501.01.T01:intron 45.0%
GTCAAGTAATATGGGACGGA+GGG - Chr3:534864-534883 MsG0380011501.01.T01:CDS 45.0%
GTCAAGTAATATGGGACGGA+GGG + Chr3:534883-534864 None:intergenic 45.0%
GTGAGGTGATTAAAGATGCG+AGG + Chr3:537184-537203 None:intergenic 45.0%
TCTCAAATCCCCTCTGACAT+AGG - Chr3:537224-537243 MsG0380011501.01.T01:intron 45.0%
TTAGGGCATGGAGTTTGGAA+TGG + Chr3:537796-537815 None:intergenic 45.0%
! AGGGGATTTGAGATTCTACC+GGG + Chr3:537263-537282 None:intergenic 45.0%
! ATGAAGCATTTGATCCCCTG+TGG + Chr3:535065-535084 None:intergenic 45.0%
! GAGGGGATTTGAGATTCTAC+CGG + Chr3:537264-537283 None:intergenic 45.0%
! GATTGCTGGATTAGGGCTAT+TGG - Chr3:536211-536230 MsG0380011501.01.T01:intron 45.0%
! GTAATCACATGTGTCGGTGT+CGG + Chr3:536025-536044 None:intergenic 45.0%
!! ACGGAGGGAGTACCATTTAA+AGG + Chr3:534620-534639 None:intergenic 45.0%
!! GATGTGAATAGAGGGTGTTG+TGG - Chr3:537736-537755 MsG0380011501.01.T01:CDS 45.0%
!! GGTAGCCTTGTAGTTGGAAT+AGG + Chr3:534024-534043 None:intergenic 45.0%
!!! AATATAAGTAATATTTTTTT+TGG + Chr3:536937-536956 None:intergenic 5.0%
AACTATGCTTCAGCTGCTGC+TGG - Chr3:535091-535110 MsG0380011501.01.T01:intron 50.0%
ACTGAAACACGCCTAATCCG+AGG + Chr3:535983-536002 None:intergenic 50.0%
CACGGATACGAACATGGACA+CGG + Chr3:536096-536115 None:intergenic 50.0%
CCAACTGAGTTAAGCTCACG+GGG + Chr3:537064-537083 None:intergenic 50.0%
CCATTTGAGAAGCGACCAGT+CGG + Chr3:533402-533421 None:intergenic 50.0%
CTGCATACAATGGAGCCACA+GGG - Chr3:535047-535066 MsG0380011501.01.T01:intron 50.0%
GGCATCCGGCCTAACAATTT+CGG + Chr3:536839-536858 None:intergenic 50.0%
GGTCAAGTAATATGGGACGG+AGG - Chr3:534863-534882 MsG0380011501.01.T01:CDS 50.0%
GGTCAAGTAATATGGGACGG+AGG + Chr3:534882-534863 None:intergenic 50.0%
GTCTTAAGTGGTGCAGTCAC+AGG - Chr3:533255-533274 MsG0380011501.01.T01:CDS 50.0%
TATGAAGCACGGTCACTCCT+CGG - Chr3:535963-535982 MsG0380011501.01.T01:intron 50.0%
TCCAGAAGTCCTAGCTCAAC+TGG - Chr3:536709-536728 MsG0380011501.01.T01:intron 50.0%
TGACAGTTCCCGCATGTTTC+AGG - Chr3:536379-536398 MsG0380011501.01.T01:intron 50.0%
TGCATACAATGGAGCCACAG+GGG - Chr3:535048-535067 MsG0380011501.01.T01:intron 50.0%
! ACACACACAAGTGGAGGTAC+CGG + Chr3:536880-536899 None:intergenic 50.0%
! GCTGGAATCCTTGATGACAC+AGG - Chr3:535109-535128 MsG0380011501.01.T01:intron 50.0%
! GGCATTTTGCCAGTTGAGCT+AGG + Chr3:536721-536740 None:intergenic 50.0%
! TGTGGCCTTGGAAGAAACAG+AGG - Chr3:537754-537773 MsG0380011501.01.T01:CDS 50.0%
!! AATAGAGGGTGTTGTGGCCT+TGG - Chr3:537742-537761 MsG0380011501.01.T01:CDS 50.0%
CCCCGTGAGCTTAACTCAGT+TGG - Chr3:537061-537080 MsG0380011501.01.T01:intron 55.0%
CCTGCATACAATGGAGCCAC+AGG - Chr3:535046-535065 MsG0380011501.01.T01:intron 55.0%
CCTGTGGCTCCATTGTATGC+AGG + Chr3:535049-535068 None:intergenic 55.0%
GATGCGAGGCGAAAGATGTG+AGG + Chr3:537170-537189 None:intergenic 55.0%
GCCAGTTGAGCTAGGACTTC+TGG + Chr3:536713-536732 None:intergenic 55.0%
TCCAGAAGTCCTAGCTCAGC+TGG - Chr3:536806-536825 MsG0380011501.01.T01:intron 55.0%
! AAGGTCTGGGGTTTGAACCC+TGG - Chr3:537107-537126 MsG0380011501.01.T01:intron 55.0%
! CCGACTGGTCGCTTCTCAAA+TGG - Chr3:533399-533418 MsG0380011501.01.T01:CDS 55.0%
! GGCATTTTGCCAGCTGAGCT+AGG + Chr3:536818-536837 None:intergenic 55.0%
!! ACACACAAGTGGAGGTACCG+GGG + Chr3:536878-536897 None:intergenic 55.0%
!! CACACACAAGTGGAGGTACC+GGG + Chr3:536879-536898 None:intergenic 55.0%
!! GACTTCAATGGTGGACCGAC+TGG - Chr3:533384-533403 MsG0380011501.01.T01:CDS 55.0%
CATGACCGAGGTTCGAACCC+CGG - Chr3:536858-536877 MsG0380011501.01.T01:intron 60.0%
CGAACCTCGGTCATGGCATC+CGG + Chr3:536853-536872 None:intergenic 60.0%
GCACGGTCACTCCTCGGATT+AGG - Chr3:535969-535988 MsG0380011501.01.T01:intron 60.0%
GCCAGCTGAGCTAGGACTTC+TGG + Chr3:536810-536829 None:intergenic 60.0%
!! AGGTACCGGGGTTCGAACCT+CGG + Chr3:536866-536885 None:intergenic 60.0%
CGGGGTTCGAACCTCGGTCA+TGG + Chr3:536860-536879 None:intergenic 65.0%
TAGGCCGGATGCCATGACCG+AGG - Chr3:536846-536865 MsG0380011501.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr3 gene 533210 537948 533210 ID=MsG0380011501.01;Name=MsG0380011501.01
Chr3 mRNA 533210 537948 533210 ID=MsG0380011501.01.T01;Parent=MsG0380011501.01;Name=MsG0380011501.01.T01;_AED=0.39;_eAED=0.39;_QI=0|0|0|1|1|1|5|0|355
Chr3 exon 537714 537948 537714 ID=MsG0380011501.01.T01:exon:51;Parent=MsG0380011501.01.T01
Chr3 exon 536017 536138 536017 ID=MsG0380011501.01.T01:exon:52;Parent=MsG0380011501.01.T01
Chr3 exon 535257 535496 535257 ID=MsG0380011501.01.T01:exon:53;Parent=MsG0380011501.01.T01
Chr3 exon 534730 534979 534730 ID=MsG0380011501.01.T01:exon:54;Parent=MsG0380011501.01.T01
Chr3 exon 533210 533430 533210 ID=MsG0380011501.01.T01:exon:55;Parent=MsG0380011501.01.T01
Chr3 CDS 537714 537948 537714 ID=MsG0380011501.01.T01:cds;Parent=MsG0380011501.01.T01
Chr3 CDS 536017 536138 536017 ID=MsG0380011501.01.T01:cds;Parent=MsG0380011501.01.T01
Chr3 CDS 535257 535496 535257 ID=MsG0380011501.01.T01:cds;Parent=MsG0380011501.01.T01
Chr3 CDS 534730 534979 534730 ID=MsG0380011501.01.T01:cds;Parent=MsG0380011501.01.T01
Chr3 CDS 533210 533430 533210 ID=MsG0380011501.01.T01:cds;Parent=MsG0380011501.01.T01
Gene Sequence

>MsG0380011501.01.T01

ATGGCTAAGTTAGGAGTATCTCAAATATTCTTGGTGCTTATCATGGTCTTAAGTGGTGCAGTCACAGGCCAAAATGTTCCTGCCATGTTCATATTTGGTGACTCACTTATTGATAATGGTAACAATAACAACATGGCTTCATTAGCTAAAGCTAACTATTTTCCATATGGTATTGACTTCAATGGTGGACCGACTGGTCGCTTCTCAAATGGTTACACTATTGTTGATGAGATAGCTGAACTGCTTGGACTTCCCTTAATTCCTGCATACAATGGAGCCACAGGGGATCAAATGCTTCATGGAGTAAACTATGCTTCAGCTGCTGCTGGAATCCTTGATGACACAGGAAGAAACTTTGTTGGGCGCATACCATTTGATGAACAACTTAGAAACTTTGAGAATACATTGAATCAACTTACTGGAAATATTGGAGCAGATAATATGGCCACACAACTATCAAGGTGCATATTCTTTGTTGGAATGGGAAGCAATGACTACCTAAACAACTACCTTATGCCTAATTATAACACCAGAAATCAGTACAATGGACAACAGTATGCAGATCTCTTGGTTCAAACATATAACCACCAACTCACTAGGCTTTACAATCTTGGAGCAAGGAAATTTGTGATTGCTGGATTAGGGCTATTGGGATGTACTCCAAGCATATTGTCTCAAAGTACGAGTGGAAGCTGCTCTGAACAAGTGAACATACTAGTGCAACCCTTCAATGAAAATGTGAAGGCCATGTTGAGCAATCTCAACAATAATCTACCTGGTTCCAGATTCATATTCATTGACAGTTCCCGCATGTTTCAGGAAATTCTTTTCAATGCAAGATCATATGGATTTACTGATGTGAATAGAGGGTGTTGTGGCCTTGGAAGAAACAGAGGTCAAATAACTTGTCTGCCATTCCAAACTCCATGCCCTAATAGAAACCGTTATGTGTTTTGGGATGCATTTCATCCAACAGAAGCAGTTAACATTCTTATGGGAAGGATGGCTTTTAATGGCAATACCAATTTTGTTTATCCTATCAACATTCAGCAACTTGCTCAACTATAA

Protein sequence

>MsG0380011501.01.T01

MAKLGVSQIFLVLIMVLSGAVTGQNVPAMFIFGDSLIDNGNNNNMASLAKANYFPYGIDFNGGPTGRFSNGYTIVDEIAELLGLPLIPAYNGATGDQMLHGVNYASAAAGILDDTGRNFVGRIPFDEQLRNFENTLNQLTGNIGADNMATQLSRCIFFVGMGSNDYLNNYLMPNYNTRNQYNGQQYADLLVQTYNHQLTRLYNLGARKFVIAGLGLLGCTPSILSQSTSGSCSEQVNILVQPFNENVKAMLSNLNNNLPGSRFIFIDSSRMFQEILFNARSYGFTDVNRGCCGLGRNRGQITCLPFQTPCPNRNRYVFWDAFHPTEAVNILMGRMAFNGNTNFVYPINIQQLAQL*