Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040611.01.T01 | XP_003625315.1 | 98.718 | 156 | 2 | 0 | 1 | 156 | 39 | 194 | 4.92E-111 | 323 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040611.01.T01 | A0A1V1FH01 | 91.026 | 156 | 14 | 0 | 1 | 156 | 33 | 188 | 7.52E-106 | 303 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040611.01.T01 | G7KWC3 | 98.718 | 156 | 2 | 0 | 1 | 156 | 39 | 194 | 2.35e-111 | 323 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180000019.01 | MsG0780040611.01 | 0.810369 | 1.192800e-50 | 7.176899e-48 |
| MsG0180001053.01 | MsG0780040611.01 | 0.840322 | 9.326210e-58 | 1.323561e-54 |
| MsG0780040611.01 | MsG0780040614.01 | 0.821743 | 3.433043e-53 | 2.816950e-50 |
| MsG0780040611.01 | MsG0780041196.01 | 0.825343 | 4.937760e-54 | 4.488472e-51 |
| MsG0780040611.01 | MsG0780041299.01 | 0.837933 | 3.879582e-57 | 5.116983e-54 |
| MsG0280011350.01 | MsG0780040611.01 | 0.809892 | 1.511501e-50 | 8.981515e-48 |
| MsG0280011473.01 | MsG0780040611.01 | 0.843214 | 1.607703e-58 | 2.497545e-55 |
| MsG0580025191.01 | MsG0780040611.01 | 0.833408 | 5.426178e-56 | 6.243340e-53 |
| MsG0380015488.01 | MsG0780040611.01 | 0.800148 | 1.650720e-48 | 7.629810e-46 |
| MsG0380015489.01 | MsG0780040611.01 | 0.817418 | 3.331616e-52 | 2.425024e-49 |
| MsG0580029412.01 | MsG0780040611.01 | 0.809506 | 1.830050e-50 | 1.076397e-47 |
| MsG0780039334.01 | MsG0780040611.01 | 0.812286 | 4.575225e-51 | 2.897283e-48 |
PPI
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040611.01.T01 | MTR_7g093820 | 98.718 | 156 | 2 | 0 | 1 | 156 | 39 | 194 | 5.96e-115 | 323 |
| MsG0780040611.01.T01 | MTR_7g093850 | 97.436 | 156 | 4 | 0 | 1 | 156 | 39 | 194 | 1.83e-113 | 320 |
| MsG0780040611.01.T01 | MTR_7g093830 | 96.795 | 156 | 5 | 0 | 1 | 156 | 38 | 193 | 3.12e-112 | 317 |
| MsG0780040611.01.T01 | MTR_7g093790 | 80.769 | 156 | 30 | 0 | 1 | 156 | 36 | 191 | 7.36e-95 | 272 |
| MsG0780040611.01.T01 | MTR_7g093870 | 60.625 | 160 | 57 | 3 | 2 | 156 | 35 | 193 | 1.41e-65 | 199 |
| MsG0780040611.01.T01 | MTR_4g013350 | 52.229 | 157 | 73 | 2 | 1 | 156 | 42 | 197 | 4.38e-57 | 177 |
| MsG0780040611.01.T01 | MTR_4g013345 | 52.229 | 157 | 73 | 2 | 1 | 156 | 41 | 196 | 7.84e-56 | 174 |
| MsG0780040611.01.T01 | MTR_1g054525 | 54.605 | 152 | 66 | 2 | 5 | 156 | 44 | 192 | 2.04e-54 | 170 |
| MsG0780040611.01.T01 | MTR_4g013335 | 50.318 | 157 | 74 | 3 | 1 | 156 | 43 | 196 | 4.64e-54 | 169 |
| MsG0780040611.01.T01 | MTR_4g013330 | 50.314 | 159 | 75 | 3 | 1 | 156 | 42 | 199 | 1.43e-53 | 168 |
| MsG0780040611.01.T01 | MTR_4g013320 | 51.316 | 152 | 73 | 1 | 5 | 156 | 49 | 199 | 2.10e-53 | 168 |
| MsG0780040611.01.T01 | MTR_4g013325 | 52.740 | 146 | 68 | 1 | 11 | 156 | 55 | 199 | 5.02e-53 | 167 |
| MsG0780040611.01.T01 | MTR_4g073950 | 52.288 | 153 | 71 | 2 | 5 | 156 | 41 | 192 | 3.51e-51 | 162 |
| MsG0780040611.01.T01 | MTR_3g105640 | 52.941 | 153 | 69 | 3 | 6 | 156 | 37 | 188 | 4.59e-50 | 159 |
| MsG0780040611.01.T01 | MTR_4g013310 | 50.658 | 152 | 72 | 2 | 5 | 156 | 49 | 197 | 4.95e-50 | 159 |
| MsG0780040611.01.T01 | MTR_3g105630 | 50.000 | 154 | 73 | 3 | 6 | 156 | 37 | 189 | 3.68e-49 | 157 |
| MsG0780040611.01.T01 | MTR_7g070390 | 51.316 | 152 | 72 | 2 | 5 | 156 | 43 | 192 | 4.12e-47 | 151 |
| MsG0780040611.01.T01 | MTR_4g013385 | 45.395 | 152 | 81 | 2 | 5 | 156 | 41 | 190 | 2.12e-44 | 144 |
| MsG0780040611.01.T01 | MTR_0433s0040 | 45.395 | 152 | 81 | 2 | 5 | 156 | 41 | 190 | 2.12e-44 | 144 |
| MsG0780040611.01.T01 | MTR_5g096120 | 49.677 | 155 | 71 | 4 | 7 | 156 | 37 | 189 | 2.18e-44 | 144 |
| MsG0780040611.01.T01 | MTR_1g056370 | 47.619 | 147 | 74 | 3 | 10 | 155 | 41 | 185 | 1.62e-42 | 139 |
| MsG0780040611.01.T01 | MTR_4g013770 | 41.892 | 148 | 84 | 2 | 10 | 156 | 45 | 191 | 3.91e-41 | 136 |
| MsG0780040611.01.T01 | MTR_3g034030 | 46.358 | 151 | 76 | 4 | 7 | 156 | 39 | 185 | 6.68e-40 | 133 |
| MsG0780040611.01.T01 | MTR_4g078885 | 45.395 | 152 | 78 | 4 | 6 | 156 | 38 | 185 | 2.43e-39 | 131 |
| MsG0780040611.01.T01 | MTR_4g013355 | 39.474 | 152 | 81 | 1 | 5 | 156 | 39 | 179 | 7.86e-36 | 122 |
| MsG0780040611.01.T01 | MTR_4g122110 | 40.397 | 151 | 89 | 1 | 6 | 156 | 31 | 180 | 4.29e-30 | 108 |
| MsG0780040611.01.T01 | MTR_4g122130 | 40.397 | 151 | 89 | 1 | 6 | 156 | 31 | 180 | 1.09e-29 | 107 |
| MsG0780040611.01.T01 | MTR_4g049570 | 32.215 | 149 | 100 | 1 | 3 | 151 | 26 | 173 | 3.43e-21 | 85.1 |
| MsG0780040611.01.T01 | MTR_4g049550 | 30.822 | 146 | 100 | 1 | 6 | 151 | 29 | 173 | 2.64e-20 | 82.8 |
| MsG0780040611.01.T01 | MTR_1g046490 | 38.947 | 95 | 56 | 2 | 40 | 134 | 119 | 211 | 9.72e-14 | 66.6 |
| MsG0780040611.01.T01 | MTR_1g046800 | 40.000 | 95 | 55 | 2 | 40 | 134 | 133 | 225 | 1.01e-13 | 66.6 |
| MsG0780040611.01.T01 | MTR_1g046500 | 40.000 | 95 | 55 | 2 | 40 | 134 | 133 | 225 | 1.53e-13 | 66.2 |
| MsG0780040611.01.T01 | MTR_1g115510 | 36.154 | 130 | 75 | 5 | 33 | 155 | 225 | 353 | 9.08e-13 | 64.7 |
| MsG0780040611.01.T01 | MTR_4g062520 | 37.383 | 107 | 66 | 1 | 33 | 139 | 177 | 282 | 1.83e-12 | 63.9 |
| MsG0780040611.01.T01 | MTR_4g062470 | 37.383 | 107 | 66 | 1 | 33 | 139 | 178 | 283 | 2.36e-12 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040611.01.T01 | AT5G42500 | 52.941 | 153 | 69 | 2 | 3 | 155 | 36 | 185 | 8.03e-54 | 168 |
| MsG0780040611.01.T01 | AT1G65870 | 51.634 | 153 | 73 | 1 | 3 | 155 | 38 | 189 | 3.21e-51 | 162 |
| MsG0780040611.01.T01 | AT5G42510 | 50.980 | 153 | 72 | 2 | 3 | 155 | 33 | 182 | 3.37e-51 | 162 |
| MsG0780040611.01.T01 | AT1G22900 | 51.634 | 153 | 71 | 2 | 3 | 155 | 44 | 193 | 1.11e-49 | 158 |
| MsG0780040611.01.T01 | AT1G58170 | 45.806 | 155 | 83 | 1 | 2 | 156 | 32 | 185 | 3.97e-48 | 154 |
| MsG0780040611.01.T01 | AT5G49040 | 45.395 | 152 | 82 | 1 | 5 | 156 | 41 | 191 | 3.93e-47 | 152 |
| MsG0780040611.01.T01 | AT1G55210 | 45.860 | 157 | 80 | 3 | 1 | 156 | 35 | 187 | 5.51e-47 | 151 |
| MsG0780040611.01.T01 | AT1G55210 | 45.860 | 157 | 80 | 3 | 1 | 156 | 35 | 187 | 5.51e-47 | 151 |
| MsG0780040611.01.T01 | AT3G13650 | 44.805 | 154 | 81 | 2 | 3 | 156 | 37 | 186 | 7.30e-46 | 148 |
| MsG0780040611.01.T01 | AT2G21100 | 48.667 | 150 | 76 | 1 | 6 | 155 | 39 | 187 | 1.78e-43 | 142 |
| MsG0780040611.01.T01 | AT2G21100 | 48.667 | 150 | 76 | 1 | 6 | 155 | 39 | 187 | 1.78e-43 | 142 |
| MsG0780040611.01.T01 | AT3G13662 | 47.857 | 140 | 69 | 2 | 4 | 143 | 37 | 172 | 6.43e-43 | 140 |
| MsG0780040611.01.T01 | AT2G21110 | 44.371 | 151 | 79 | 2 | 10 | 156 | 37 | 186 | 3.22e-42 | 139 |
| MsG0780040611.01.T01 | AT4G38700 | 44.304 | 158 | 83 | 3 | 4 | 156 | 33 | 190 | 5.53e-40 | 133 |
| MsG0780040611.01.T01 | AT5G49030 | 46.923 | 130 | 68 | 1 | 5 | 134 | 41 | 169 | 1.60e-37 | 136 |
| MsG0780040611.01.T01 | AT3G58090 | 45.522 | 134 | 72 | 1 | 22 | 155 | 139 | 271 | 1.96e-34 | 121 |
| MsG0780040611.01.T01 | AT3G13660 | 43.697 | 119 | 66 | 1 | 38 | 156 | 8 | 125 | 3.23e-33 | 114 |
| MsG0780040611.01.T01 | AT4G23690 | 34.586 | 133 | 75 | 5 | 5 | 131 | 36 | 162 | 2.23e-13 | 64.7 |
| MsG0780040611.01.T01 | AT3G24020 | 35.789 | 95 | 59 | 2 | 40 | 134 | 126 | 218 | 7.40e-11 | 58.9 |
Find 48 sgRNAs with CRISPR-Local
Find 52 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGATCATGAGTGAACCTATT+AGG | 0.222910 | 7:-79975838 | MsG0780040611.01.T01:CDS |
| ACGATGGCCATTTCCCTAAT+AGG | 0.275509 | 7:+79975824 | None:intergenic |
| TGGCAGCACACTTAGTATAT+TGG | 0.296246 | 7:-79975870 | MsG0780040611.01.T01:CDS |
| AGGCTATACCTAACTAATAA+TGG | 0.313486 | 7:+79975693 | None:intergenic |
| GATCATGAGTGAACCTATTA+GGG | 0.369433 | 7:-79975837 | MsG0780040611.01.T01:CDS |
| GGCAGCACACTTAGTATATT+GGG | 0.369856 | 7:-79975869 | MsG0780040611.01.T01:CDS |
| ACAAATACCATGCTAGGTTT+TGG | 0.370876 | 7:+79976088 | None:intergenic |
| CACAAGTTTCGAGTCACGTT+CGG | 0.378497 | 7:+79975985 | None:intergenic |
| ATGGCCATCGTTGGTGGGAC+TGG | 0.382946 | 7:-79975812 | MsG0780040611.01.T01:CDS |
| TATTCGGTTGATTATACAAA+AGG | 0.426193 | 7:-79975749 | MsG0780040611.01.T01:CDS |
| TACTTTCACGACATTGTGTC+AGG | 0.427188 | 7:-79976112 | MsG0780040611.01.T01:CDS |
| CGTTCGGGCCCAGCCGTCAA+TGG | 0.437540 | 7:+79976001 | None:intergenic |
| ATGGACGATCCATTGACGGC+TGG | 0.438919 | 7:-79976010 | MsG0780040611.01.T01:CDS |
| GAGTGAACCTATTAGGGAAA+TGG | 0.447065 | 7:-79975831 | MsG0780040611.01.T01:CDS |
| TTCTATATCACAAGAGGAGA+TGG | 0.477985 | 7:-79975939 | MsG0780040611.01.T01:CDS |
| AGGGAAATGGCCATCGTTGG+TGG | 0.488017 | 7:-79975818 | MsG0780040611.01.T01:CDS |
| GAACGTGACTCGAAACTTGT+GGG | 0.491012 | 7:-79975983 | MsG0780040611.01.T01:CDS |
| TTCACTGATGGAGATTTCAA+TGG | 0.501509 | 7:-79975890 | MsG0780040611.01.T01:CDS |
| TGGACGATCCATTGACGGCT+GGG | 0.502437 | 7:-79976009 | MsG0780040611.01.T01:CDS |
| ACAAGTTTCGAGTCACGTTC+GGG | 0.503136 | 7:+79975986 | None:intergenic |
| AGCCTATCCCCAACAATGCT+GGG | 0.510899 | 7:-79976169 | None:intergenic |
| ATTCGGGACAGTTGTGGCGA+TGG | 0.519713 | 7:-79976029 | MsG0780040611.01.T01:CDS |
| AGAGGAGATGGGACTAATGA+TGG | 0.528699 | 7:-79975927 | MsG0780040611.01.T01:CDS |
| TGACTCGAAACTTGTGGGTA+AGG | 0.534298 | 7:-79975978 | MsG0780040611.01.T01:CDS |
| CTTGCCATTCGGGACAGTTG+TGG | 0.537319 | 7:-79976035 | MsG0780040611.01.T01:CDS |
| GGCGATGGACGATCCATTGA+CGG | 0.538554 | 7:-79976014 | MsG0780040611.01.T01:CDS |
| AAACTTGTGGGTAAGGCTCA+AGG | 0.545821 | 7:-79975971 | MsG0780040611.01.T01:CDS |
| TCAGCTACAAATACCATGCT+AGG | 0.557255 | 7:+79976082 | None:intergenic |
| TTACACTTCTATATCACAAG+AGG | 0.558364 | 7:-79975945 | MsG0780040611.01.T01:CDS |
| ATGACCATGGCATTCACTGA+TGG | 0.562304 | 7:-79975902 | MsG0780040611.01.T01:CDS |
| TCTATATCACAAGAGGAGAT+GGG | 0.592301 | 7:-79975938 | MsG0780040611.01.T01:CDS |
| CGAACGTGACTCGAAACTTG+TGG | 0.592756 | 7:-79975984 | MsG0780040611.01.T01:CDS |
| CGTGAAAGTAAAAGTGAAGG+TGG | 0.597471 | 7:+79976125 | None:intergenic |
| ATTAGGGAAATGGCCATCGT+TGG | 0.598209 | 7:-79975821 | MsG0780040611.01.T01:CDS |
| GGGAAATGGCCATCGTTGGT+GGG | 0.599477 | 7:-79975817 | MsG0780040611.01.T01:CDS |
| CACAACTGTCCCGAATGGCA+AGG | 0.608603 | 7:+79976036 | None:intergenic |
| ATCGCCACAACTGTCCCGAA+TGG | 0.611420 | 7:+79976031 | None:intergenic |
| GTCAGGACCAAAACCTAGCA+TGG | 0.622028 | 7:-79976095 | MsG0780040611.01.T01:CDS |
| TGTAGCTGAGCCCAATGGCA+AGG | 0.624333 | 7:-79976068 | MsG0780040611.01.T01:CDS |
| TACAAAAGGAGATGCCATTG+TGG | 0.627394 | 7:-79975735 | MsG0780040611.01.T01:CDS |
| AGCTCCAGTCCCACCAACGA+TGG | 0.631050 | 7:+79975808 | None:intergenic |
| ATCTCCATCAGTGAATGCCA+TGG | 0.633818 | 7:+79975898 | None:intergenic |
| TGTCGTGAAAGTAAAAGTGA+AGG | 0.637192 | 7:+79976122 | None:intergenic |
| GTATTTGTAGCTGAGCCCAA+TGG | 0.650930 | 7:-79976073 | MsG0780040611.01.T01:CDS |
| GCACACTTAGTATATTGGGA+AGG | 0.678770 | 7:-79975865 | MsG0780040611.01.T01:CDS |
| GTGAAAGTAAAAGTGAAGGT+GGG | 0.693286 | 7:+79976126 | None:intergenic |
| AAATATGTCATACTCCACAA+TGG | 0.693639 | 7:+79975721 | None:intergenic |
| ACTAATGATGGTGATGACCA+TGG | 0.702330 | 7:-79975915 | MsG0780040611.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | TATTCGGTTGATTATACAAA+AGG | - | Chr7:79976111-79976130 | MsG0780040611.01.T01:CDS | 25.0% |
| AAATATGTCATACTCCACAA+TGG | + | Chr7:79976142-79976161 | None:intergenic | 30.0% | |
| TTACACTTCTATATCACAAG+AGG | - | Chr7:79975915-79975934 | MsG0780040611.01.T01:CDS | 30.0% | |
| !!! | TGCTCAAGCTAAGTTTTATT+CGG | - | Chr7:79976095-79976114 | MsG0780040611.01.T01:CDS | 30.0% |
| GATCATGAGTGAACCTATTA+GGG | - | Chr7:79976023-79976042 | MsG0780040611.01.T01:CDS | 35.0% | |
| GTAAAAAATGCCTTGCCATT+CGG | - | Chr7:79975814-79975833 | MsG0780040611.01.T01:CDS | 35.0% | |
| GTGAAAGTAAAAGTGAAGGT+GGG | + | Chr7:79975737-79975756 | None:intergenic | 35.0% | |
| TAAAAAATGCCTTGCCATTC+GGG | - | Chr7:79975815-79975834 | MsG0780040611.01.T01:CDS | 35.0% | |
| TCTATATCACAAGAGGAGAT+GGG | - | Chr7:79975922-79975941 | MsG0780040611.01.T01:CDS | 35.0% | |
| TGATCATGAGTGAACCTATT+AGG | - | Chr7:79976022-79976041 | MsG0780040611.01.T01:CDS | 35.0% | |
| TGTCGTGAAAGTAAAAGTGA+AGG | + | Chr7:79975741-79975760 | None:intergenic | 35.0% | |
| TTCACTGATGGAGATTTCAA+TGG | - | Chr7:79975970-79975989 | MsG0780040611.01.T01:CDS | 35.0% | |
| TTCTATATCACAAGAGGAGA+TGG | - | Chr7:79975921-79975940 | MsG0780040611.01.T01:CDS | 35.0% | |
| ! | ACAAATACCATGCTAGGTTT+TGG | + | Chr7:79975775-79975794 | None:intergenic | 35.0% |
| !!! | GCATTTTTTACCTTGCCATT+GGG | + | Chr7:79975805-79975824 | None:intergenic | 35.0% |
| CGTGAAAGTAAAAGTGAAGG+TGG | + | Chr7:79975738-79975757 | None:intergenic | 40.0% | |
| GAGTGAACCTATTAGGGAAA+TGG | - | Chr7:79976029-79976048 | MsG0780040611.01.T01:CDS | 40.0% | |
| GCACACTTAGTATATTGGGA+AGG | - | Chr7:79975995-79976014 | MsG0780040611.01.T01:CDS | 40.0% | |
| GGCAGCACACTTAGTATATT+GGG | - | Chr7:79975991-79976010 | MsG0780040611.01.T01:CDS | 40.0% | |
| TACAAAAGGAGATGCCATTG+TGG | - | Chr7:79976125-79976144 | MsG0780040611.01.T01:CDS | 40.0% | |
| TACTTTCACGACATTGTGTC+AGG | - | Chr7:79975748-79975767 | MsG0780040611.01.T01:CDS | 40.0% | |
| TCAGCTACAAATACCATGCT+AGG | + | Chr7:79975781-79975800 | None:intergenic | 40.0% | |
| TGGCAGCACACTTAGTATAT+TGG | - | Chr7:79975990-79976009 | MsG0780040611.01.T01:CDS | 40.0% | |
| ! | ACTAATGATGGTGATGACCA+TGG | - | Chr7:79975945-79975964 | MsG0780040611.01.T01:CDS | 40.0% |
| !!! | GGCATTTTTTACCTTGCCAT+TGG | + | Chr7:79975806-79975825 | None:intergenic | 40.0% |
| AAACTTGTGGGTAAGGCTCA+AGG | - | Chr7:79975889-79975908 | MsG0780040611.01.T01:CDS | 45.0% | |
| ACGATGGCCATTTCCCTAAT+AGG | + | Chr7:79976039-79976058 | None:intergenic | 45.0% | |
| AGAGGAGATGGGACTAATGA+TGG | - | Chr7:79975933-79975952 | MsG0780040611.01.T01:CDS | 45.0% | |
| ATCTCCATCAGTGAATGCCA+TGG | + | Chr7:79975965-79975984 | None:intergenic | 45.0% | |
| ATGACCATGGCATTCACTGA+TGG | - | Chr7:79975958-79975977 | MsG0780040611.01.T01:CDS | 45.0% | |
| ATTAGGGAAATGGCCATCGT+TGG | - | Chr7:79976039-79976058 | MsG0780040611.01.T01:CDS | 45.0% | |
| GAACGTGACTCGAAACTTGT+GGG | - | Chr7:79975877-79975896 | MsG0780040611.01.T01:CDS | 45.0% | |
| GTATTTGTAGCTGAGCCCAA+TGG | - | Chr7:79975787-79975806 | MsG0780040611.01.T01:CDS | 45.0% | |
| TGACTCGAAACTTGTGGGTA+AGG | - | Chr7:79975882-79975901 | MsG0780040611.01.T01:CDS | 45.0% | |
| ! | ACAAGTTTCGAGTCACGTTC+GGG | + | Chr7:79975877-79975896 | None:intergenic | 45.0% |
| ! | CACAAGTTTCGAGTCACGTT+CGG | + | Chr7:79975878-79975897 | None:intergenic | 45.0% |
| CGAACGTGACTCGAAACTTG+TGG | - | Chr7:79975876-79975895 | MsG0780040611.01.T01:CDS | 50.0% | |
| GTCAGGACCAAAACCTAGCA+TGG | - | Chr7:79975765-79975784 | MsG0780040611.01.T01:CDS | 50.0% | |
| ! | GGAGCTTTTCGTTTCGTACG+TGG | - | Chr7:79976069-79976088 | MsG0780040611.01.T01:CDS | 50.0% |
| AGGGAAATGGCCATCGTTGG+TGG | - | Chr7:79976042-79976061 | MsG0780040611.01.T01:CDS | 55.0% | |
| ATCGCCACAACTGTCCCGAA+TGG | + | Chr7:79975832-79975851 | None:intergenic | 55.0% | |
| ATGGACGATCCATTGACGGC+TGG | - | Chr7:79975850-79975869 | MsG0780040611.01.T01:CDS | 55.0% | |
| ATTCGGGACAGTTGTGGCGA+TGG | - | Chr7:79975831-79975850 | MsG0780040611.01.T01:CDS | 55.0% | |
| CACAACTGTCCCGAATGGCA+AGG | + | Chr7:79975827-79975846 | None:intergenic | 55.0% | |
| CTTGCCATTCGGGACAGTTG+TGG | - | Chr7:79975825-79975844 | MsG0780040611.01.T01:CDS | 55.0% | |
| GGCGATGGACGATCCATTGA+CGG | - | Chr7:79975846-79975865 | MsG0780040611.01.T01:CDS | 55.0% | |
| GGGAAATGGCCATCGTTGGT+GGG | - | Chr7:79976043-79976062 | MsG0780040611.01.T01:CDS | 55.0% | |
| TGGACGATCCATTGACGGCT+GGG | - | Chr7:79975851-79975870 | MsG0780040611.01.T01:CDS | 55.0% | |
| TGTAGCTGAGCCCAATGGCA+AGG | - | Chr7:79975792-79975811 | MsG0780040611.01.T01:CDS | 55.0% | |
| AGCTCCAGTCCCACCAACGA+TGG | + | Chr7:79976055-79976074 | None:intergenic | 60.0% | |
| ! | ATGGCCATCGTTGGTGGGAC+TGG | - | Chr7:79976048-79976067 | MsG0780040611.01.T01:CDS | 60.0% |
| CGTTCGGGCCCAGCCGTCAA+TGG | + | Chr7:79975862-79975881 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 79975706 | 79976176 | 79975706 | ID=MsG0780040611.01;Name=MsG0780040611.01 |
| Chr7 | mRNA | 79975706 | 79976176 | 79975706 | ID=MsG0780040611.01.T01;Parent=MsG0780040611.01;Name=MsG0780040611.01.T01;_AED=0.39;_eAED=0.39;_QI=0|-1|0|1|-1|1|1|0|156 |
| Chr7 | exon | 79975706 | 79976176 | 79975706 | ID=MsG0780040611.01.T01:exon:6682;Parent=MsG0780040611.01.T01 |
| Chr7 | CDS | 79975706 | 79976176 | 79975706 | ID=MsG0780040611.01.T01:cds;Parent=MsG0780040611.01.T01 |
| Gene Sequence |
| Protein sequence |
