Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040613.01.T01 | XP_003625315.1 | 98.077 | 156 | 3 | 0 | 1 | 156 | 39 | 194 | 4.37E-110 | 321 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040613.01.T01 | A0A1V1FH01 | 91.667 | 156 | 13 | 0 | 1 | 156 | 33 | 188 | 9.89E-106 | 302 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040613.01.T01 | G7KWC3 | 98.077 | 156 | 3 | 0 | 1 | 156 | 39 | 194 | 2.09e-110 | 321 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048312.01 | MsG0780040613.01 | 0.807321 | 5.350875e-50 | 2.971416e-47 |
| MsG0080048345.01 | MsG0780040613.01 | 0.855599 | 5.663020e-62 | 1.314400e-58 |
| MsG0080048347.01 | MsG0780040613.01 | 0.860824 | 1.577072e-63 | 4.368669e-60 |
| MsG0080048348.01 | MsG0780040613.01 | 0.837132 | 6.226134e-57 | 8.011632e-54 |
| MsG0080048349.01 | MsG0780040613.01 | 0.821735 | 3.446509e-53 | 2.827458e-50 |
| MsG0080048350.01 | MsG0780040613.01 | 0.804530 | 2.066356e-49 | 1.067916e-46 |
| MsG0080048352.01 | MsG0780040613.01 | 0.867065 | 1.801260e-65 | 6.205954e-62 |
| MsG0180001691.01 | MsG0780040613.01 | 0.809646 | 1.707005e-50 | 1.007853e-47 |
| MsG0180002274.01 | MsG0780040613.01 | 0.806365 | 8.520754e-50 | 4.616178e-47 |
| MsG0180003830.01 | MsG0780040613.01 | 0.841906 | 3.575603e-58 | 5.331096e-55 |
| MsG0180005356.01 | MsG0780040613.01 | 0.875211 | 3.685135e-68 | 1.706764e-64 |
| MsG0180005357.01 | MsG0780040613.01 | 0.840164 | 1.025292e-57 | 1.448255e-54 |
| MsG0180005358.01 | MsG0780040613.01 | 0.856512 | 3.059921e-62 | 7.322366e-59 |
| MsG0180005648.01 | MsG0780040613.01 | 0.823294 | 1.496953e-53 | 1.283653e-50 |
| MsG0780040612.01 | MsG0780040613.01 | 0.860299 | 2.275060e-63 | 6.188970e-60 |
| MsG0780040613.01 | MsG0780041316.01 | 0.841451 | 4.713980e-58 | 6.930010e-55 |
| MsG0780040613.01 | MsG0780041556.01 | 0.857474 | 1.592924e-62 | 3.936236e-59 |
| MsG0780040613.01 | MsG0880042740.01 | 0.814759 | 1.308333e-51 | 8.854824e-49 |
| MsG0780040613.01 | MsG0880043828.01 | 0.805811 | 1.114617e-49 | 5.953841e-47 |
| MsG0280011165.01 | MsG0780040613.01 | 0.811164 | 8.029731e-51 | 4.934484e-48 |
| MsG0280011193.01 | MsG0780040613.01 | 0.801150 | 1.031531e-48 | 4.890691e-46 |
| MsG0280011203.01 | MsG0780040613.01 | 0.808149 | 3.568761e-50 | 2.025164e-47 |
| MsG0380011613.01 | MsG0780040613.01 | 0.802652 | 5.068875e-49 | 2.496463e-46 |
| MsG0380013300.01 | MsG0780040613.01 | 0.810676 | 1.024040e-50 | 6.212212e-48 |
| MsG0380013449.01 | MsG0780040613.01 | 0.813708 | 2.232393e-51 | 1.468591e-48 |
| MsG0380013452.01 | MsG0780040613.01 | 0.815313 | 9.853747e-52 | 6.770417e-49 |
| MsG0380013458.01 | MsG0780040613.01 | 0.803981 | 2.689173e-49 | 1.370437e-46 |
| MsG0480022308.01 | MsG0780040613.01 | 0.801577 | 8.433501e-49 | 4.041641e-46 |
| MsG0480022655.01 | MsG0780040613.01 | 0.816606 | 5.070330e-52 | 3.609349e-49 |
| MsG0480023107.01 | MsG0780040613.01 | 0.802206 | 6.262700e-49 | 3.049563e-46 |
| MsG0580024218.01 | MsG0780040613.01 | 0.802603 | 5.187496e-49 | 2.551785e-46 |
| MsG0580024220.01 | MsG0780040613.01 | 0.809943 | 1.473742e-50 | 8.769159e-48 |
| MsG0580024408.01 | MsG0780040613.01 | 0.804767 | 1.844474e-49 | 9.591642e-47 |
| MsG0580024719.01 | MsG0780040613.01 | 0.822019 | 2.963495e-53 | 2.450791e-50 |
| MsG0580025682.01 | MsG0780040613.01 | 0.810565 | 1.082263e-50 | 6.545726e-48 |
| MsG0380017151.01 | MsG0780040613.01 | 0.802788 | 4.750221e-49 | 2.347850e-46 |
| MsG0580028999.01 | MsG0780040613.01 | 0.814843 | 1.253254e-51 | 8.501454e-49 |
| MsG0580030133.01 | MsG0780040613.01 | 0.836359 | 9.803200e-57 | 1.232571e-53 |
| MsG0580030135.01 | MsG0780040613.01 | 0.808758 | 2.646456e-50 | 1.525826e-47 |
| MsG0280006476.01 | MsG0780040613.01 | 0.803276 | 3.766388e-49 | 1.884806e-46 |
| MsG0280006883.01 | MsG0780040613.01 | 0.809419 | 1.910199e-50 | 1.121012e-47 |
| MsG0280008405.01 | MsG0780040613.01 | 0.803730 | 3.032104e-49 | 1.535203e-46 |
| MsG0780036661.01 | MsG0780040613.01 | 0.833215 | 6.061676e-56 | 6.934485e-53 |
| MsG0780039978.01 | MsG0780040613.01 | 0.825493 | 4.549870e-54 | 4.153532e-51 |
PPI
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040613.01.T01 | MTR_7g093820 | 98.077 | 156 | 3 | 0 | 1 | 156 | 39 | 194 | 5.29e-114 | 321 |
| MsG0780040613.01.T01 | MTR_7g093850 | 96.795 | 156 | 5 | 0 | 1 | 156 | 39 | 194 | 1.42e-112 | 317 |
| MsG0780040613.01.T01 | MTR_7g093830 | 97.436 | 156 | 4 | 0 | 1 | 156 | 38 | 193 | 1.71e-112 | 317 |
| MsG0780040613.01.T01 | MTR_7g093790 | 80.128 | 156 | 31 | 0 | 1 | 156 | 36 | 191 | 2.77e-94 | 271 |
| MsG0780040613.01.T01 | MTR_7g093870 | 59.375 | 160 | 59 | 3 | 2 | 156 | 35 | 193 | 5.29e-65 | 198 |
| MsG0780040613.01.T01 | MTR_4g013350 | 52.866 | 157 | 72 | 2 | 1 | 156 | 42 | 197 | 4.58e-57 | 177 |
| MsG0780040613.01.T01 | MTR_4g013345 | 52.866 | 157 | 72 | 2 | 1 | 156 | 41 | 196 | 9.75e-56 | 174 |
| MsG0780040613.01.T01 | MTR_1g054525 | 54.605 | 152 | 66 | 2 | 5 | 156 | 44 | 192 | 9.93e-54 | 168 |
| MsG0780040613.01.T01 | MTR_4g013320 | 51.316 | 152 | 73 | 1 | 5 | 156 | 49 | 199 | 1.62e-53 | 168 |
| MsG0780040613.01.T01 | MTR_4g013335 | 50.318 | 157 | 74 | 3 | 1 | 156 | 43 | 196 | 1.63e-53 | 168 |
| MsG0780040613.01.T01 | MTR_4g013330 | 50.943 | 159 | 74 | 3 | 1 | 156 | 42 | 199 | 1.76e-53 | 168 |
| MsG0780040613.01.T01 | MTR_4g013325 | 52.740 | 146 | 68 | 1 | 11 | 156 | 55 | 199 | 1.67e-52 | 166 |
| MsG0780040613.01.T01 | MTR_4g073950 | 52.941 | 153 | 70 | 2 | 5 | 156 | 41 | 192 | 1.55e-51 | 163 |
| MsG0780040613.01.T01 | MTR_4g013310 | 51.316 | 152 | 71 | 2 | 5 | 156 | 49 | 197 | 4.30e-50 | 159 |
| MsG0780040613.01.T01 | MTR_3g105640 | 51.634 | 153 | 71 | 3 | 6 | 156 | 37 | 188 | 3.13e-49 | 157 |
| MsG0780040613.01.T01 | MTR_3g105630 | 49.351 | 154 | 74 | 3 | 6 | 156 | 37 | 189 | 9.70e-49 | 155 |
| MsG0780040613.01.T01 | MTR_7g070390 | 51.974 | 152 | 71 | 2 | 5 | 156 | 43 | 192 | 4.91e-47 | 151 |
| MsG0780040613.01.T01 | MTR_4g013385 | 46.053 | 152 | 80 | 2 | 5 | 156 | 41 | 190 | 1.23e-44 | 145 |
| MsG0780040613.01.T01 | MTR_0433s0040 | 46.053 | 152 | 80 | 2 | 5 | 156 | 41 | 190 | 1.23e-44 | 145 |
| MsG0780040613.01.T01 | MTR_5g096120 | 49.032 | 155 | 72 | 4 | 7 | 156 | 37 | 189 | 5.74e-44 | 143 |
| MsG0780040613.01.T01 | MTR_1g056370 | 47.619 | 147 | 74 | 3 | 10 | 155 | 41 | 185 | 2.55e-42 | 139 |
| MsG0780040613.01.T01 | MTR_4g013770 | 42.568 | 148 | 83 | 2 | 10 | 156 | 45 | 191 | 1.91e-41 | 137 |
| MsG0780040613.01.T01 | MTR_3g034030 | 45.695 | 151 | 77 | 4 | 7 | 156 | 39 | 185 | 1.81e-39 | 132 |
| MsG0780040613.01.T01 | MTR_4g078885 | 44.737 | 152 | 79 | 4 | 6 | 156 | 38 | 185 | 6.53e-39 | 130 |
| MsG0780040613.01.T01 | MTR_4g013355 | 40.132 | 152 | 80 | 1 | 5 | 156 | 39 | 179 | 4.88e-36 | 123 |
| MsG0780040613.01.T01 | MTR_4g122110 | 39.073 | 151 | 91 | 1 | 6 | 156 | 31 | 180 | 4.92e-29 | 105 |
| MsG0780040613.01.T01 | MTR_4g122130 | 39.073 | 151 | 91 | 1 | 6 | 156 | 31 | 180 | 1.40e-28 | 103 |
| MsG0780040613.01.T01 | MTR_4g049570 | 32.215 | 149 | 100 | 1 | 3 | 151 | 26 | 173 | 2.33e-21 | 85.5 |
| MsG0780040613.01.T01 | MTR_4g049550 | 30.822 | 146 | 100 | 1 | 6 | 151 | 29 | 173 | 2.30e-20 | 82.8 |
| MsG0780040613.01.T01 | MTR_1g046490 | 38.947 | 95 | 56 | 2 | 40 | 134 | 119 | 211 | 1.24e-13 | 66.2 |
| MsG0780040613.01.T01 | MTR_1g046800 | 40.000 | 95 | 55 | 2 | 40 | 134 | 133 | 225 | 1.25e-13 | 66.6 |
| MsG0780040613.01.T01 | MTR_1g046500 | 40.000 | 95 | 55 | 2 | 40 | 134 | 133 | 225 | 1.73e-13 | 66.2 |
| MsG0780040613.01.T01 | MTR_4g062520 | 37.383 | 107 | 66 | 1 | 33 | 139 | 177 | 282 | 1.85e-12 | 63.9 |
| MsG0780040613.01.T01 | MTR_4g062470 | 37.383 | 107 | 66 | 1 | 33 | 139 | 178 | 283 | 2.24e-12 | 63.5 |
| MsG0780040613.01.T01 | MTR_1g115510 | 35.385 | 130 | 76 | 5 | 33 | 155 | 225 | 353 | 2.41e-12 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040613.01.T01 | AT5G42500 | 52.941 | 153 | 69 | 2 | 3 | 155 | 36 | 185 | 1.45e-53 | 167 |
| MsG0780040613.01.T01 | AT5G42510 | 50.980 | 153 | 72 | 2 | 3 | 155 | 33 | 182 | 4.10e-51 | 161 |
| MsG0780040613.01.T01 | AT1G65870 | 51.634 | 153 | 73 | 1 | 3 | 155 | 38 | 189 | 4.71e-51 | 161 |
| MsG0780040613.01.T01 | AT1G22900 | 50.980 | 153 | 72 | 2 | 3 | 155 | 44 | 193 | 2.97e-49 | 157 |
| MsG0780040613.01.T01 | AT1G58170 | 46.452 | 155 | 82 | 1 | 2 | 156 | 32 | 185 | 3.92e-48 | 154 |
| MsG0780040613.01.T01 | AT5G49040 | 46.053 | 152 | 81 | 1 | 5 | 156 | 41 | 191 | 3.52e-47 | 152 |
| MsG0780040613.01.T01 | AT1G55210 | 46.497 | 157 | 79 | 3 | 1 | 156 | 35 | 187 | 5.63e-47 | 151 |
| MsG0780040613.01.T01 | AT1G55210 | 46.497 | 157 | 79 | 3 | 1 | 156 | 35 | 187 | 5.63e-47 | 151 |
| MsG0780040613.01.T01 | AT3G13650 | 45.455 | 154 | 80 | 2 | 3 | 156 | 37 | 186 | 7.55e-46 | 148 |
| MsG0780040613.01.T01 | AT2G21100 | 48.000 | 150 | 77 | 1 | 6 | 155 | 39 | 187 | 9.66e-44 | 143 |
| MsG0780040613.01.T01 | AT2G21100 | 48.000 | 150 | 77 | 1 | 6 | 155 | 39 | 187 | 9.66e-44 | 143 |
| MsG0780040613.01.T01 | AT3G13662 | 47.857 | 140 | 69 | 2 | 4 | 143 | 37 | 172 | 2.56e-42 | 139 |
| MsG0780040613.01.T01 | AT2G21110 | 43.709 | 151 | 80 | 2 | 10 | 156 | 37 | 186 | 3.63e-42 | 139 |
| MsG0780040613.01.T01 | AT4G38700 | 43.671 | 158 | 84 | 3 | 4 | 156 | 33 | 190 | 1.01e-39 | 132 |
| MsG0780040613.01.T01 | AT5G49030 | 47.692 | 130 | 67 | 1 | 5 | 134 | 41 | 169 | 2.01e-37 | 135 |
| MsG0780040613.01.T01 | AT3G58090 | 45.522 | 134 | 72 | 1 | 22 | 155 | 139 | 271 | 3.53e-34 | 120 |
| MsG0780040613.01.T01 | AT3G13660 | 44.538 | 119 | 65 | 1 | 38 | 156 | 8 | 125 | 2.96e-33 | 114 |
| MsG0780040613.01.T01 | AT4G23690 | 34.586 | 133 | 75 | 5 | 5 | 131 | 36 | 162 | 8.79e-14 | 65.9 |
| MsG0780040613.01.T01 | AT4G11210 | 31.061 | 132 | 87 | 3 | 11 | 142 | 42 | 169 | 7.98e-11 | 57.8 |
| MsG0780040613.01.T01 | AT3G24020 | 35.789 | 95 | 59 | 2 | 40 | 134 | 126 | 218 | 8.34e-11 | 58.5 |
Find 44 sgRNAs with CRISPR-Local
Find 51 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTAAAACACCTAACTAATAA+TGG | 0.327962 | 7:+79999185 | None:intergenic |
| TGGAAGTACACTTAGCATAT+TGG | 0.334562 | 7:-79999362 | MsG0780040613.01.T01:CDS |
| ATGGATGACCCCTTGACAGC+TGG | 0.343154 | 7:-79999502 | MsG0780040613.01.T01:CDS |
| ACAATGGCCATTTCTCTAAC+AGG | 0.363166 | 7:+79999316 | None:intergenic |
| ACAAATACCATGCTAGGTTT+TGG | 0.370876 | 7:+79999580 | None:intergenic |
| GGAAGTACACTTAGCATATT+GGG | 0.380807 | 7:-79999361 | MsG0780040613.01.T01:CDS |
| AGCCTATCCCCAACAATGTT+GGG | 0.408783 | 7:-79999661 | None:intergenic |
| ATGGCCATTGTTGGTGGGAC+TGG | 0.413384 | 7:-79999304 | MsG0780040613.01.T01:CDS |
| ACGTTCGGGCCCAGCTGTCA+AGG | 0.414456 | 7:+79999492 | None:intergenic |
| TACTTTCATGACATCGTGTC+GGG | 0.429084 | 7:-79999604 | MsG0780040613.01.T01:CDS |
| TATTCCGTTGATTACACTAA+AGG | 0.444889 | 7:-79999241 | MsG0780040613.01.T01:CDS |
| GAGTGAACCTGTTAGAGAAA+TGG | 0.463422 | 7:-79999323 | MsG0780040613.01.T01:CDS |
| CGTTCGGGCCCAGCTGTCAA+GGG | 0.473432 | 7:+79999493 | None:intergenic |
| TTCTATATCACAAGAGGAGA+TGG | 0.477985 | 7:-79999431 | MsG0780040613.01.T01:CDS |
| TTCAGTGATGGAGATTTCAA+TGG | 0.482811 | 7:-79999382 | MsG0780040613.01.T01:CDS |
| TGGATGACCCCTTGACAGCT+GGG | 0.499162 | 7:-79999501 | MsG0780040613.01.T01:CDS |
| TGAATCAAAACTTGTGGGTA+AGG | 0.505874 | 7:-79999470 | MsG0780040613.01.T01:CDS |
| ATCGCCACAACTGTCCCAAA+TGG | 0.528212 | 7:+79999523 | None:intergenic |
| AGAGGAGATGGGACTAATGA+TGG | 0.528699 | 7:-79999419 | MsG0780040613.01.T01:CDS |
| TCAGCTACAAATACCATGCT+AGG | 0.528865 | 7:+79999574 | None:intergenic |
| ATTTGGGACAGTTGTGGCGA+TGG | 0.529221 | 7:-79999521 | MsG0780040613.01.T01:CDS |
| GTTAGAGAAATGGCCATTGT+TGG | 0.545345 | 7:-79999313 | MsG0780040613.01.T01:CDS |
| ATGACCATGGCGTTCAGTGA+TGG | 0.546366 | 7:-79999394 | MsG0780040613.01.T01:CDS |
| TTTCGTACGTGGGTATGCTC+AGG | 0.546620 | 7:-79999272 | MsG0780040613.01.T01:CDS |
| AAACTTGTGGGTAAGGCTCA+AGG | 0.547993 | 7:-79999463 | MsG0780040613.01.T01:CDS |
| TTACACTTCTATATCACAAG+AGG | 0.558364 | 7:-79999437 | MsG0780040613.01.T01:CDS |
| CTTGCCATTTGGGACAGTTG+TGG | 0.563355 | 7:-79999527 | MsG0780040613.01.T01:CDS |
| GAACGTGAATCAAAACTTGT+GGG | 0.564741 | 7:-79999475 | MsG0780040613.01.T01:CDS |
| AGAGAAATGGCCATTGTTGG+TGG | 0.569066 | 7:-79999310 | MsG0780040613.01.T01:CDS |
| AGCTCCAGTCCCACCAACAA+TGG | 0.574074 | 7:+79999300 | None:intergenic |
| TTACTTTCATGACATCGTGT+CGG | 0.584715 | 7:-79999605 | MsG0780040613.01.T01:CDS |
| GTTCGGGCCCAGCTGTCAAG+GGG | 0.587949 | 7:+79999494 | None:intergenic |
| CACTAAAGGAGATGCCATTG+TGG | 0.590470 | 7:-79999227 | MsG0780040613.01.T01:CDS |
| TCTATATCACAAGAGGAGAT+GGG | 0.592301 | 7:-79999430 | MsG0780040613.01.T01:CDS |
| ATCTCCTTTAGTGTAATCAA+CGG | 0.597699 | 7:+79999237 | None:intergenic |
| CACAACTGTCCCAAATGGCA+AGG | 0.598704 | 7:+79999528 | None:intergenic |
| GAGAAATGGCCATTGTTGGT+GGG | 0.599344 | 7:-79999309 | MsG0780040613.01.T01:CDS |
| ATCTCCATCACTGAACGCCA+TGG | 0.609829 | 7:+79999390 | None:intergenic |
| GTCGGGACCAAAACCTAGCA+TGG | 0.611064 | 7:-79999587 | MsG0780040613.01.T01:CDS |
| CGAACGTGAATCAAAACTTG+TGG | 0.618950 | 7:-79999476 | MsG0780040613.01.T01:CDS |
| TGTAGCTGAACCCAATGGCA+AGG | 0.648979 | 7:-79999560 | MsG0780040613.01.T01:CDS |
| GTATTTGTAGCTGAACCCAA+TGG | 0.653475 | 7:-79999565 | MsG0780040613.01.T01:CDS |
| AAATATGTCATATTCCACAA+TGG | 0.686079 | 7:+79999213 | None:intergenic |
| ACTAATGATGGTGATGACCA+TGG | 0.699161 | 7:-79999407 | MsG0780040613.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | AAATATGTCATATTCCACAA+TGG | + | Chr7:79999634-79999653 | None:intergenic | 25.0% |
| ! | TGTCATGAAAGTAAAAATGA+AGG | + | Chr7:79999233-79999252 | None:intergenic | 25.0% |
| ATCTCCTTTAGTGTAATCAA+CGG | + | Chr7:79999610-79999629 | None:intergenic | 30.0% | |
| TTACACTTCTATATCACAAG+AGG | - | Chr7:79999407-79999426 | MsG0780040613.01.T01:CDS | 30.0% | |
| ! | TAAAAAATGCCTTGCCATTT+GGG | - | Chr7:79999307-79999326 | MsG0780040613.01.T01:CDS | 30.0% |
| ! | TATTCCGTTGATTACACTAA+AGG | - | Chr7:79999603-79999622 | MsG0780040613.01.T01:CDS | 30.0% |
| GAACGTGAATCAAAACTTGT+GGG | - | Chr7:79999369-79999388 | MsG0780040613.01.T01:CDS | 35.0% | |
| GTAAAAAATGCCTTGCCATT+TGG | - | Chr7:79999306-79999325 | MsG0780040613.01.T01:CDS | 35.0% | |
| TCTATATCACAAGAGGAGAT+GGG | - | Chr7:79999414-79999433 | MsG0780040613.01.T01:CDS | 35.0% | |
| TGAATCAAAACTTGTGGGTA+AGG | - | Chr7:79999374-79999393 | MsG0780040613.01.T01:CDS | 35.0% | |
| TTACTTTCATGACATCGTGT+CGG | - | Chr7:79999239-79999258 | MsG0780040613.01.T01:CDS | 35.0% | |
| TTCTATATCACAAGAGGAGA+TGG | - | Chr7:79999413-79999432 | MsG0780040613.01.T01:CDS | 35.0% | |
| ! | ACAAATACCATGCTAGGTTT+TGG | + | Chr7:79999267-79999286 | None:intergenic | 35.0% |
| ! | GGAAGTACACTTAGCATATT+GGG | - | Chr7:79999483-79999502 | MsG0780040613.01.T01:CDS | 35.0% |
| ! | TGGAAGTACACTTAGCATAT+TGG | - | Chr7:79999482-79999501 | MsG0780040613.01.T01:CDS | 35.0% |
| ! | TTCAGTGATGGAGATTTCAA+TGG | - | Chr7:79999462-79999481 | MsG0780040613.01.T01:CDS | 35.0% |
| !!! | ACAAGTTTTGATTCACGTTC+GGG | + | Chr7:79999369-79999388 | None:intergenic | 35.0% |
| !!! | CACAAGTTTTGATTCACGTT+CGG | + | Chr7:79999370-79999389 | None:intergenic | 35.0% |
| !!! | GCATTTTTTACCTTGCCATT+GGG | + | Chr7:79999297-79999316 | None:intergenic | 35.0% |
| ACAATGGCCATTTCTCTAAC+AGG | + | Chr7:79999531-79999550 | None:intergenic | 40.0% | |
| CGAACGTGAATCAAAACTTG+TGG | - | Chr7:79999368-79999387 | MsG0780040613.01.T01:CDS | 40.0% | |
| GAGTGAACCTGTTAGAGAAA+TGG | - | Chr7:79999521-79999540 | MsG0780040613.01.T01:CDS | 40.0% | |
| GTATTTGTAGCTGAACCCAA+TGG | - | Chr7:79999279-79999298 | MsG0780040613.01.T01:CDS | 40.0% | |
| GTTAGAGAAATGGCCATTGT+TGG | - | Chr7:79999531-79999550 | MsG0780040613.01.T01:CDS | 40.0% | |
| TACTTTCATGACATCGTGTC+GGG | - | Chr7:79999240-79999259 | MsG0780040613.01.T01:CDS | 40.0% | |
| TCAGCTACAAATACCATGCT+AGG | + | Chr7:79999273-79999292 | None:intergenic | 40.0% | |
| ! | ACTAATGATGGTGATGACCA+TGG | - | Chr7:79999437-79999456 | MsG0780040613.01.T01:CDS | 40.0% |
| !!! | GGCATTTTTTACCTTGCCAT+TGG | + | Chr7:79999298-79999317 | None:intergenic | 40.0% |
| AAACTTGTGGGTAAGGCTCA+AGG | - | Chr7:79999381-79999400 | MsG0780040613.01.T01:CDS | 45.0% | |
| AGAGAAATGGCCATTGTTGG+TGG | - | Chr7:79999534-79999553 | MsG0780040613.01.T01:CDS | 45.0% | |
| AGAGGAGATGGGACTAATGA+TGG | - | Chr7:79999425-79999444 | MsG0780040613.01.T01:CDS | 45.0% | |
| CACTAAAGGAGATGCCATTG+TGG | - | Chr7:79999617-79999636 | MsG0780040613.01.T01:CDS | 45.0% | |
| GAGAAATGGCCATTGTTGGT+GGG | - | Chr7:79999535-79999554 | MsG0780040613.01.T01:CDS | 45.0% | |
| ! | GAGCTTTTCGTTTCGTACGT+GGG | - | Chr7:79999562-79999581 | MsG0780040613.01.T01:CDS | 45.0% |
| ATCGCCACAACTGTCCCAAA+TGG | + | Chr7:79999324-79999343 | None:intergenic | 50.0% | |
| ATCTCCATCACTGAACGCCA+TGG | + | Chr7:79999457-79999476 | None:intergenic | 50.0% | |
| ATGACCATGGCGTTCAGTGA+TGG | - | Chr7:79999450-79999469 | MsG0780040613.01.T01:CDS | 50.0% | |
| CACAACTGTCCCAAATGGCA+AGG | + | Chr7:79999319-79999338 | None:intergenic | 50.0% | |
| TGTAGCTGAACCCAATGGCA+AGG | - | Chr7:79999284-79999303 | MsG0780040613.01.T01:CDS | 50.0% | |
| TTTCGTACGTGGGTATGCTC+AGG | - | Chr7:79999572-79999591 | MsG0780040613.01.T01:CDS | 50.0% | |
| ! | ATTTGGGACAGTTGTGGCGA+TGG | - | Chr7:79999323-79999342 | MsG0780040613.01.T01:CDS | 50.0% |
| ! | CTTGCCATTTGGGACAGTTG+TGG | - | Chr7:79999317-79999336 | MsG0780040613.01.T01:CDS | 50.0% |
| ! | GGAGCTTTTCGTTTCGTACG+TGG | - | Chr7:79999561-79999580 | MsG0780040613.01.T01:CDS | 50.0% |
| AGCTCCAGTCCCACCAACAA+TGG | + | Chr7:79999547-79999566 | None:intergenic | 55.0% | |
| ATGGATGACCCCTTGACAGC+TGG | - | Chr7:79999342-79999361 | MsG0780040613.01.T01:CDS | 55.0% | |
| GTCGGGACCAAAACCTAGCA+TGG | - | Chr7:79999257-79999276 | MsG0780040613.01.T01:CDS | 55.0% | |
| TGGATGACCCCTTGACAGCT+GGG | - | Chr7:79999343-79999362 | MsG0780040613.01.T01:CDS | 55.0% | |
| ! | ATGGCCATTGTTGGTGGGAC+TGG | - | Chr7:79999540-79999559 | MsG0780040613.01.T01:CDS | 55.0% |
| ACGTTCGGGCCCAGCTGTCA+AGG | + | Chr7:79999355-79999374 | None:intergenic | 65.0% | |
| CGTTCGGGCCCAGCTGTCAA+GGG | + | Chr7:79999354-79999373 | None:intergenic | 65.0% | |
| GTTCGGGCCCAGCTGTCAAG+GGG | + | Chr7:79999353-79999372 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 79999198 | 79999668 | 79999198 | ID=MsG0780040613.01;Name=MsG0780040613.01 |
| Chr7 | mRNA | 79999198 | 79999668 | 79999198 | ID=MsG0780040613.01.T01;Parent=MsG0780040613.01;Name=MsG0780040613.01.T01;_AED=0.49;_eAED=0.49;_QI=0|-1|0|1|-1|1|1|0|156 |
| Chr7 | exon | 79999198 | 79999668 | 79999198 | ID=MsG0780040613.01.T01:exon:16389;Parent=MsG0780040613.01.T01 |
| Chr7 | CDS | 79999198 | 79999668 | 79999198 | ID=MsG0780040613.01.T01:cds;Parent=MsG0780040613.01.T01 |
| Gene Sequence |
| Protein sequence |
